examples/psDNA/inference_query_set.json

{
    "seeds": [
        42
    ],
    "queries": {
        "dna_test": {
            "query_name": "dna_test",
            "chains": [
                {
                    "molecule_type": "DNA",
                    "chain_ids": [
                        "B"
                    ],
                    "sequence": "TTTTATACGATGGG",
                    "non_canonical_residues": null,
                    "smiles": null,
                    "ccd_codes": null,
                    "paired_msa_file_paths": null,
                    "main_msa_file_paths": null,
                    "template_alignment_file_path": null,
                    "template_entry_chain_ids": null,
                    "sdf_file_path": null
                },
                {
                    "molecule_type": "DNA",
                    "chain_ids": [
                        "B"
                    ],
                    "sequence": "AAAATATGCTACCC",
                    "non_canonical_residues": null,
                    "smiles": null,
                    "ccd_codes": null,
                    "paired_msa_file_paths": null,
                    "main_msa_file_paths": null,
                    "template_alignment_file_path": null,
                    "template_entry_chain_ids": null,
                    "sdf_file_path": null
                }
            ],
            "use_msas": true,
            "use_paired_msas": true,
            "use_main_msas": true,
            "covalent_bonds": null
        }
    }
}