| { | |
| "sim_data": "/home/bwittm/share/synthetic_cerebral_octa", | |
| "sim_data_version": "b421", | |
| "annotations": "/home/bwittm/share/manual_annotations", | |
| "test_imgs": [ | |
| "m4_0" | |
| ], | |
| "val_imgs": [ | |
| "m4_0" | |
| ], | |
| "train_on_real": false, | |
| "train_img": [ | |
| "m4_1", | |
| "m44_0", | |
| "m44_1", | |
| "m78_0", | |
| "m78_1" | |
| ], | |
| "experiment_name": "superunet_syn_base_moreparams", | |
| "device": "cuda:0", | |
| "store_ckpt": true, | |
| "epochs": 300, | |
| "epochs_decay": 50, | |
| "val_interval": 1, | |
| "itera_pro_epoch": 50000, | |
| "seed": 0, | |
| "batch_size": 32, | |
| "num_workers": 16, | |
| "sliding_window_overlap": 0.5, | |
| "sliding_window_mode": "constant", | |
| "threshold": 0.5, | |
| "seg": { | |
| "lr": "1e-5", | |
| "channels": [ | |
| 64, | |
| 128, | |
| 256, | |
| 512, | |
| 1024 | |
| ], | |
| "strides": [ | |
| 2, | |
| 2, | |
| 2, | |
| 2 | |
| ], | |
| "activation": "LEAKYRELU", | |
| "normalization": "BATCH", | |
| "dropout": 0.3, | |
| "max_norm_clip": 1.0, | |
| "cldice": false, | |
| "iter": 15, | |
| "alpha": 0.1, | |
| "smooth": 1 | |
| }, | |
| "augmentation": { | |
| "patch_size": [ | |
| 64, | |
| 64, | |
| 64 | |
| ], | |
| "use_augmentation": true, | |
| "p_gaussian_noise": 0.5, | |
| "p_gaussian_smooth": 0.5, | |
| "p_intensity_scale": 0, | |
| "p_intensity_shift": 0, | |
| "p_adjust_contrast": 0, | |
| "p_histogram_shift": 0.5, | |
| "p_rotate": 0.5, | |
| "p_zoom": 0.5, | |
| "p_shear": 0, | |
| "p_flip": [ | |
| 0, | |
| 0.5, | |
| 0.5 | |
| ], | |
| "gaussian_noise_mean": 0.0, | |
| "gaussian_noise_std": 0.01, | |
| "gaussian_smooth_sigma": [ | |
| 0.0, | |
| 0.5 | |
| ], | |
| "intensity_scale_factors": [ | |
| -0.5, | |
| 1.2 | |
| ], | |
| "intensity_shift_offsets": [ | |
| 0.05, | |
| 0.2 | |
| ], | |
| "adjust_contrast_gamma": [ | |
| 0.7, | |
| 1.3 | |
| ], | |
| "control_points": [ | |
| 5, | |
| 10 | |
| ], | |
| "rotation": [ | |
| -90, | |
| 90 | |
| ], | |
| "min_zoom": 1.0, | |
| "max_zoom": 1.2, | |
| "shear_range": [ | |
| 0.1, | |
| 0.1, | |
| 0.1 | |
| ] | |
| }, | |
| "git_commit_hash": "7a8f7f7", | |
| "python_version": "3.8.19 | packaged by conda-forge | (default, Mar 20 2024, 12:47:35) ", | |
| "gcc_version": "[GCC 12.3.0]", | |
| "pytorch_version": "1.13.1+cu116", | |
| "host_name": "u20-computeibmgpu-vesta13" | |
| } |