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- README.md +29 -0
- vesselFM_base.pt +3 -0
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README.md
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---
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pipeline_tag: image-segmentation
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tags:
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- medical
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- biology
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- clinical
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---
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# vesselFM
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**TL;DR**: VesselFM is a foundation model for universal 3D blood vessel segmentation in arbitrary imaging domains.
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For details, please refer to our preprint (https://arxiv.org/pdf/2411.17386) and our GitHub repo (https://github.com/bwittmann/vesselFM).
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---
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### Checkpoints
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We provide the following checkpoints:
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- `vesselFM_base.pt`: VesselFM pre-trained on our three proposed data sources (D_real, D_drand, and D_flow). This checkpoint will be automatically downloaded in `vesselfm/seg/inference.py`.
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### Citing vesselFM
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If you find our work useful, please cite:
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```bibtex
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@article{wittmann2024vesselfm,
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title={vesselFM: A Foundation Model for Universal 3D Blood Vessel Segmentation},
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author={Wittmann, Bastian and Wattenberg, Yannick and Amiranashvili, Tamaz and Shit, Suprosanna and Menze, Bjoern},
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journal={arXiv preprint arXiv:2411.17386},
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year={2024}
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}
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```
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vesselFM_base.pt
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version https://git-lfs.github.com/spec/v1
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oid sha256:6da4fbd06dd9c3b597e5d50cc628deb3026919ff126d01afbd13ac8fe22ee10c
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size 125713671
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