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pythonProject/.venv/Lib/site-packages/networkx/algorithms/centrality/__pycache__/percolation.cpython-310.pyc
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pythonProject/.venv/Lib/site-packages/networkx/algorithms/centrality/__pycache__/voterank_alg.cpython-310.pyc
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pythonProject/.venv/Lib/site-packages/networkx/algorithms/centrality/tests/__init__.py
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pythonProject/.venv/Lib/site-packages/networkx/algorithms/centrality/tests/__pycache__/test_betweenness_centrality.cpython-310.pyc
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pythonProject/.venv/Lib/site-packages/networkx/algorithms/centrality/tests/__pycache__/test_betweenness_centrality_subset.cpython-310.pyc
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pythonProject/.venv/Lib/site-packages/networkx/algorithms/centrality/tests/__pycache__/test_closeness_centrality.cpython-310.pyc
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pythonProject/.venv/Lib/site-packages/networkx/algorithms/centrality/tests/__pycache__/test_current_flow_betweenness_centrality.cpython-310.pyc
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pythonProject/.venv/Lib/site-packages/networkx/algorithms/centrality/tests/__pycache__/test_eigenvector_centrality.cpython-310.pyc
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pythonProject/.venv/Lib/site-packages/networkx/algorithms/centrality/tests/__pycache__/test_katz_centrality.cpython-310.pyc
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pythonProject/.venv/Lib/site-packages/networkx/algorithms/centrality/tests/__pycache__/test_percolation_centrality.cpython-310.pyc
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pythonProject/.venv/Lib/site-packages/networkx/algorithms/centrality/tests/__pycache__/test_second_order_centrality.cpython-310.pyc
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pythonProject/.venv/Lib/site-packages/networkx/algorithms/centrality/tests/__pycache__/test_voterank.cpython-310.pyc
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pythonProject/.venv/Lib/site-packages/networkx/algorithms/centrality/tests/test_dispersion.py
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| 1 |
+
import networkx as nx
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| 2 |
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| 3 |
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| 4 |
+
def small_ego_G():
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| 5 |
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"""The sample network from https://arxiv.org/pdf/1310.6753v1.pdf"""
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| 6 |
+
edges = [
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| 7 |
+
("a", "b"),
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| 8 |
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("a", "c"),
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| 9 |
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("b", "c"),
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| 10 |
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("b", "d"),
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("b", "e"),
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("b", "f"),
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("c", "d"),
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("c", "f"),
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| 15 |
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("c", "h"),
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| 16 |
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("d", "f"),
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| 17 |
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("e", "f"),
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| 18 |
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("f", "h"),
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| 19 |
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("h", "j"),
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| 20 |
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("h", "k"),
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| 21 |
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("i", "j"),
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| 22 |
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("i", "k"),
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| 23 |
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("j", "k"),
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| 24 |
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("u", "a"),
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| 25 |
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("u", "b"),
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| 26 |
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("u", "c"),
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| 27 |
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("u", "d"),
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| 28 |
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("u", "e"),
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| 29 |
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("u", "f"),
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| 30 |
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("u", "g"),
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| 31 |
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("u", "h"),
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| 32 |
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("u", "i"),
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| 33 |
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("u", "j"),
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| 34 |
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("u", "k"),
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| 35 |
+
]
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| 36 |
+
G = nx.Graph()
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| 37 |
+
G.add_edges_from(edges)
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| 38 |
+
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| 39 |
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return G
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| 40 |
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| 41 |
+
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| 42 |
+
class TestDispersion:
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| 43 |
+
def test_article(self):
|
| 44 |
+
"""our algorithm matches article's"""
|
| 45 |
+
G = small_ego_G()
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| 46 |
+
disp_uh = nx.dispersion(G, "u", "h", normalized=False)
|
| 47 |
+
disp_ub = nx.dispersion(G, "u", "b", normalized=False)
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| 48 |
+
assert disp_uh == 4
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| 49 |
+
assert disp_ub == 1
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| 50 |
+
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| 51 |
+
def test_results_length(self):
|
| 52 |
+
"""there is a result for every node"""
|
| 53 |
+
G = small_ego_G()
|
| 54 |
+
disp = nx.dispersion(G)
|
| 55 |
+
disp_Gu = nx.dispersion(G, "u")
|
| 56 |
+
disp_uv = nx.dispersion(G, "u", "h")
|
| 57 |
+
assert len(disp) == len(G)
|
| 58 |
+
assert len(disp_Gu) == len(G) - 1
|
| 59 |
+
assert isinstance(disp_uv, float)
|
| 60 |
+
|
| 61 |
+
def test_dispersion_v_only(self):
|
| 62 |
+
G = small_ego_G()
|
| 63 |
+
disp_G_h = nx.dispersion(G, v="h", normalized=False)
|
| 64 |
+
disp_G_h_normalized = nx.dispersion(G, v="h", normalized=True)
|
| 65 |
+
assert disp_G_h == {"c": 0, "f": 0, "j": 0, "k": 0, "u": 4}
|
| 66 |
+
assert disp_G_h_normalized == {"c": 0.0, "f": 0.0, "j": 0.0, "k": 0.0, "u": 1.0}
|
| 67 |
+
|
| 68 |
+
def test_impossible_things(self):
|
| 69 |
+
G = nx.karate_club_graph()
|
| 70 |
+
disp = nx.dispersion(G)
|
| 71 |
+
for u in disp:
|
| 72 |
+
for v in disp[u]:
|
| 73 |
+
assert disp[u][v] >= 0
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pythonProject/.venv/Lib/site-packages/networkx/algorithms/centrality/tests/test_eigenvector_centrality.py
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
|
|
|
|
|
|
|
|
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|
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|
|
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|
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|
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|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
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|
|
|
|
|
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|
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|
|
|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
| 1 |
+
import math
|
| 2 |
+
|
| 3 |
+
import pytest
|
| 4 |
+
|
| 5 |
+
np = pytest.importorskip("numpy")
|
| 6 |
+
pytest.importorskip("scipy")
|
| 7 |
+
|
| 8 |
+
|
| 9 |
+
import networkx as nx
|
| 10 |
+
|
| 11 |
+
|
| 12 |
+
class TestEigenvectorCentrality:
|
| 13 |
+
def test_K5(self):
|
| 14 |
+
"""Eigenvector centrality: K5"""
|
| 15 |
+
G = nx.complete_graph(5)
|
| 16 |
+
b = nx.eigenvector_centrality(G)
|
| 17 |
+
v = math.sqrt(1 / 5.0)
|
| 18 |
+
b_answer = dict.fromkeys(G, v)
|
| 19 |
+
for n in sorted(G):
|
| 20 |
+
assert b[n] == pytest.approx(b_answer[n], abs=1e-7)
|
| 21 |
+
nstart = {n: 1 for n in G}
|
| 22 |
+
b = nx.eigenvector_centrality(G, nstart=nstart)
|
| 23 |
+
for n in sorted(G):
|
| 24 |
+
assert b[n] == pytest.approx(b_answer[n], abs=1e-7)
|
| 25 |
+
|
| 26 |
+
b = nx.eigenvector_centrality_numpy(G)
|
| 27 |
+
for n in sorted(G):
|
| 28 |
+
assert b[n] == pytest.approx(b_answer[n], abs=1e-3)
|
| 29 |
+
|
| 30 |
+
def test_P3(self):
|
| 31 |
+
"""Eigenvector centrality: P3"""
|
| 32 |
+
G = nx.path_graph(3)
|
| 33 |
+
b_answer = {0: 0.5, 1: 0.7071, 2: 0.5}
|
| 34 |
+
b = nx.eigenvector_centrality_numpy(G)
|
| 35 |
+
for n in sorted(G):
|
| 36 |
+
assert b[n] == pytest.approx(b_answer[n], abs=1e-4)
|
| 37 |
+
b = nx.eigenvector_centrality(G)
|
| 38 |
+
for n in sorted(G):
|
| 39 |
+
assert b[n] == pytest.approx(b_answer[n], abs=1e-4)
|
| 40 |
+
|
| 41 |
+
def test_P3_unweighted(self):
|
| 42 |
+
"""Eigenvector centrality: P3"""
|
| 43 |
+
G = nx.path_graph(3)
|
| 44 |
+
b_answer = {0: 0.5, 1: 0.7071, 2: 0.5}
|
| 45 |
+
b = nx.eigenvector_centrality_numpy(G, weight=None)
|
| 46 |
+
for n in sorted(G):
|
| 47 |
+
assert b[n] == pytest.approx(b_answer[n], abs=1e-4)
|
| 48 |
+
|
| 49 |
+
def test_maxiter(self):
|
| 50 |
+
with pytest.raises(nx.PowerIterationFailedConvergence):
|
| 51 |
+
G = nx.path_graph(3)
|
| 52 |
+
nx.eigenvector_centrality(G, max_iter=0)
|
| 53 |
+
|
| 54 |
+
|
| 55 |
+
class TestEigenvectorCentralityDirected:
|
| 56 |
+
@classmethod
|
| 57 |
+
def setup_class(cls):
|
| 58 |
+
G = nx.DiGraph()
|
| 59 |
+
|
| 60 |
+
edges = [
|
| 61 |
+
(1, 2),
|
| 62 |
+
(1, 3),
|
| 63 |
+
(2, 4),
|
| 64 |
+
(3, 2),
|
| 65 |
+
(3, 5),
|
| 66 |
+
(4, 2),
|
| 67 |
+
(4, 5),
|
| 68 |
+
(4, 6),
|
| 69 |
+
(5, 6),
|
| 70 |
+
(5, 7),
|
| 71 |
+
(5, 8),
|
| 72 |
+
(6, 8),
|
| 73 |
+
(7, 1),
|
| 74 |
+
(7, 5),
|
| 75 |
+
(7, 8),
|
| 76 |
+
(8, 6),
|
| 77 |
+
(8, 7),
|
| 78 |
+
]
|
| 79 |
+
|
| 80 |
+
G.add_edges_from(edges, weight=2.0)
|
| 81 |
+
cls.G = G.reverse()
|
| 82 |
+
cls.G.evc = [
|
| 83 |
+
0.25368793,
|
| 84 |
+
0.19576478,
|
| 85 |
+
0.32817092,
|
| 86 |
+
0.40430835,
|
| 87 |
+
0.48199885,
|
| 88 |
+
0.15724483,
|
| 89 |
+
0.51346196,
|
| 90 |
+
0.32475403,
|
| 91 |
+
]
|
| 92 |
+
|
| 93 |
+
H = nx.DiGraph()
|
| 94 |
+
|
| 95 |
+
edges = [
|
| 96 |
+
(1, 2),
|
| 97 |
+
(1, 3),
|
| 98 |
+
(2, 4),
|
| 99 |
+
(3, 2),
|
| 100 |
+
(3, 5),
|
| 101 |
+
(4, 2),
|
| 102 |
+
(4, 5),
|
| 103 |
+
(4, 6),
|
| 104 |
+
(5, 6),
|
| 105 |
+
(5, 7),
|
| 106 |
+
(5, 8),
|
| 107 |
+
(6, 8),
|
| 108 |
+
(7, 1),
|
| 109 |
+
(7, 5),
|
| 110 |
+
(7, 8),
|
| 111 |
+
(8, 6),
|
| 112 |
+
(8, 7),
|
| 113 |
+
]
|
| 114 |
+
|
| 115 |
+
G.add_edges_from(edges)
|
| 116 |
+
cls.H = G.reverse()
|
| 117 |
+
cls.H.evc = [
|
| 118 |
+
0.25368793,
|
| 119 |
+
0.19576478,
|
| 120 |
+
0.32817092,
|
| 121 |
+
0.40430835,
|
| 122 |
+
0.48199885,
|
| 123 |
+
0.15724483,
|
| 124 |
+
0.51346196,
|
| 125 |
+
0.32475403,
|
| 126 |
+
]
|
| 127 |
+
|
| 128 |
+
def test_eigenvector_centrality_weighted(self):
|
| 129 |
+
G = self.G
|
| 130 |
+
p = nx.eigenvector_centrality(G)
|
| 131 |
+
for a, b in zip(list(p.values()), self.G.evc):
|
| 132 |
+
assert a == pytest.approx(b, abs=1e-4)
|
| 133 |
+
|
| 134 |
+
def test_eigenvector_centrality_weighted_numpy(self):
|
| 135 |
+
G = self.G
|
| 136 |
+
p = nx.eigenvector_centrality_numpy(G)
|
| 137 |
+
for a, b in zip(list(p.values()), self.G.evc):
|
| 138 |
+
assert a == pytest.approx(b, abs=1e-7)
|
| 139 |
+
|
| 140 |
+
def test_eigenvector_centrality_unweighted(self):
|
| 141 |
+
G = self.H
|
| 142 |
+
p = nx.eigenvector_centrality(G)
|
| 143 |
+
for a, b in zip(list(p.values()), self.G.evc):
|
| 144 |
+
assert a == pytest.approx(b, abs=1e-4)
|
| 145 |
+
|
| 146 |
+
def test_eigenvector_centrality_unweighted_numpy(self):
|
| 147 |
+
G = self.H
|
| 148 |
+
p = nx.eigenvector_centrality_numpy(G)
|
| 149 |
+
for a, b in zip(list(p.values()), self.G.evc):
|
| 150 |
+
assert a == pytest.approx(b, abs=1e-7)
|
| 151 |
+
|
| 152 |
+
|
| 153 |
+
class TestEigenvectorCentralityExceptions:
|
| 154 |
+
def test_multigraph(self):
|
| 155 |
+
with pytest.raises(nx.NetworkXException):
|
| 156 |
+
nx.eigenvector_centrality(nx.MultiGraph())
|
| 157 |
+
|
| 158 |
+
def test_multigraph_numpy(self):
|
| 159 |
+
with pytest.raises(nx.NetworkXException):
|
| 160 |
+
nx.eigenvector_centrality_numpy(nx.MultiGraph())
|
| 161 |
+
|
| 162 |
+
def test_empty(self):
|
| 163 |
+
with pytest.raises(nx.NetworkXException):
|
| 164 |
+
nx.eigenvector_centrality(nx.Graph())
|
| 165 |
+
|
| 166 |
+
def test_empty_numpy(self):
|
| 167 |
+
with pytest.raises(nx.NetworkXException):
|
| 168 |
+
nx.eigenvector_centrality_numpy(nx.Graph())
|
| 169 |
+
|
| 170 |
+
def test_zero_nstart(self):
|
| 171 |
+
G = nx.Graph([(1, 2), (1, 3), (2, 3)])
|
| 172 |
+
with pytest.raises(
|
| 173 |
+
nx.NetworkXException, match="initial vector cannot have all zero values"
|
| 174 |
+
):
|
| 175 |
+
nx.eigenvector_centrality(G, nstart={v: 0 for v in G})
|
pythonProject/.venv/Lib/site-packages/networkx/algorithms/centrality/tests/test_group.py
ADDED
|
@@ -0,0 +1,278 @@
|
|
|
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|
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|
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|
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|
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|
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|
|
|
|
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|
|
|
|
|
|
|
|
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|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
"""
|
| 2 |
+
Tests for Group Centrality Measures
|
| 3 |
+
"""
|
| 4 |
+
|
| 5 |
+
|
| 6 |
+
import pytest
|
| 7 |
+
|
| 8 |
+
import networkx as nx
|
| 9 |
+
|
| 10 |
+
|
| 11 |
+
class TestGroupBetweennessCentrality:
|
| 12 |
+
def test_group_betweenness_single_node(self):
|
| 13 |
+
"""
|
| 14 |
+
Group betweenness centrality for single node group
|
| 15 |
+
"""
|
| 16 |
+
G = nx.path_graph(5)
|
| 17 |
+
C = [1]
|
| 18 |
+
b = nx.group_betweenness_centrality(
|
| 19 |
+
G, C, weight=None, normalized=False, endpoints=False
|
| 20 |
+
)
|
| 21 |
+
b_answer = 3.0
|
| 22 |
+
assert b == b_answer
|
| 23 |
+
|
| 24 |
+
def test_group_betweenness_with_endpoints(self):
|
| 25 |
+
"""
|
| 26 |
+
Group betweenness centrality for single node group
|
| 27 |
+
"""
|
| 28 |
+
G = nx.path_graph(5)
|
| 29 |
+
C = [1]
|
| 30 |
+
b = nx.group_betweenness_centrality(
|
| 31 |
+
G, C, weight=None, normalized=False, endpoints=True
|
| 32 |
+
)
|
| 33 |
+
b_answer = 7.0
|
| 34 |
+
assert b == b_answer
|
| 35 |
+
|
| 36 |
+
def test_group_betweenness_normalized(self):
|
| 37 |
+
"""
|
| 38 |
+
Group betweenness centrality for group with more than
|
| 39 |
+
1 node and normalized
|
| 40 |
+
"""
|
| 41 |
+
G = nx.path_graph(5)
|
| 42 |
+
C = [1, 3]
|
| 43 |
+
b = nx.group_betweenness_centrality(
|
| 44 |
+
G, C, weight=None, normalized=True, endpoints=False
|
| 45 |
+
)
|
| 46 |
+
b_answer = 1.0
|
| 47 |
+
assert b == b_answer
|
| 48 |
+
|
| 49 |
+
def test_two_group_betweenness_value_zero(self):
|
| 50 |
+
"""
|
| 51 |
+
Group betweenness centrality value of 0
|
| 52 |
+
"""
|
| 53 |
+
G = nx.cycle_graph(7)
|
| 54 |
+
C = [[0, 1, 6], [0, 1, 5]]
|
| 55 |
+
b = nx.group_betweenness_centrality(G, C, weight=None, normalized=False)
|
| 56 |
+
b_answer = [0.0, 3.0]
|
| 57 |
+
assert b == b_answer
|
| 58 |
+
|
| 59 |
+
def test_group_betweenness_value_zero(self):
|
| 60 |
+
"""
|
| 61 |
+
Group betweenness centrality value of 0
|
| 62 |
+
"""
|
| 63 |
+
G = nx.cycle_graph(6)
|
| 64 |
+
C = [0, 1, 5]
|
| 65 |
+
b = nx.group_betweenness_centrality(G, C, weight=None, normalized=False)
|
| 66 |
+
b_answer = 0.0
|
| 67 |
+
assert b == b_answer
|
| 68 |
+
|
| 69 |
+
def test_group_betweenness_disconnected_graph(self):
|
| 70 |
+
"""
|
| 71 |
+
Group betweenness centrality in a disconnected graph
|
| 72 |
+
"""
|
| 73 |
+
G = nx.path_graph(5)
|
| 74 |
+
G.remove_edge(0, 1)
|
| 75 |
+
C = [1]
|
| 76 |
+
b = nx.group_betweenness_centrality(G, C, weight=None, normalized=False)
|
| 77 |
+
b_answer = 0.0
|
| 78 |
+
assert b == b_answer
|
| 79 |
+
|
| 80 |
+
def test_group_betweenness_node_not_in_graph(self):
|
| 81 |
+
"""
|
| 82 |
+
Node(s) in C not in graph, raises NodeNotFound exception
|
| 83 |
+
"""
|
| 84 |
+
with pytest.raises(nx.NodeNotFound):
|
| 85 |
+
nx.group_betweenness_centrality(nx.path_graph(5), [4, 7, 8])
|
| 86 |
+
|
| 87 |
+
def test_group_betweenness_directed_weighted(self):
|
| 88 |
+
"""
|
| 89 |
+
Group betweenness centrality in a directed and weighted graph
|
| 90 |
+
"""
|
| 91 |
+
G = nx.DiGraph()
|
| 92 |
+
G.add_edge(1, 0, weight=1)
|
| 93 |
+
G.add_edge(0, 2, weight=2)
|
| 94 |
+
G.add_edge(1, 2, weight=3)
|
| 95 |
+
G.add_edge(3, 1, weight=4)
|
| 96 |
+
G.add_edge(2, 3, weight=1)
|
| 97 |
+
G.add_edge(4, 3, weight=6)
|
| 98 |
+
G.add_edge(2, 4, weight=7)
|
| 99 |
+
C = [1, 2]
|
| 100 |
+
b = nx.group_betweenness_centrality(G, C, weight="weight", normalized=False)
|
| 101 |
+
b_answer = 5.0
|
| 102 |
+
assert b == b_answer
|
| 103 |
+
|
| 104 |
+
|
| 105 |
+
class TestProminentGroup:
|
| 106 |
+
np = pytest.importorskip("numpy")
|
| 107 |
+
pd = pytest.importorskip("pandas")
|
| 108 |
+
|
| 109 |
+
def test_prominent_group_single_node(self):
|
| 110 |
+
"""
|
| 111 |
+
Prominent group for single node
|
| 112 |
+
"""
|
| 113 |
+
G = nx.path_graph(5)
|
| 114 |
+
k = 1
|
| 115 |
+
b, g = nx.prominent_group(G, k, normalized=False, endpoints=False)
|
| 116 |
+
b_answer, g_answer = 4.0, [2]
|
| 117 |
+
assert b == b_answer and g == g_answer
|
| 118 |
+
|
| 119 |
+
def test_prominent_group_with_c(self):
|
| 120 |
+
"""
|
| 121 |
+
Prominent group without some nodes
|
| 122 |
+
"""
|
| 123 |
+
G = nx.path_graph(5)
|
| 124 |
+
k = 1
|
| 125 |
+
b, g = nx.prominent_group(G, k, normalized=False, C=[2])
|
| 126 |
+
b_answer, g_answer = 3.0, [1]
|
| 127 |
+
assert b == b_answer and g == g_answer
|
| 128 |
+
|
| 129 |
+
def test_prominent_group_normalized_endpoints(self):
|
| 130 |
+
"""
|
| 131 |
+
Prominent group with normalized result, with endpoints
|
| 132 |
+
"""
|
| 133 |
+
G = nx.cycle_graph(7)
|
| 134 |
+
k = 2
|
| 135 |
+
b, g = nx.prominent_group(G, k, normalized=True, endpoints=True)
|
| 136 |
+
b_answer, g_answer = 1.7, [2, 5]
|
| 137 |
+
assert b == b_answer and g == g_answer
|
| 138 |
+
|
| 139 |
+
def test_prominent_group_disconnected_graph(self):
|
| 140 |
+
"""
|
| 141 |
+
Prominent group of disconnected graph
|
| 142 |
+
"""
|
| 143 |
+
G = nx.path_graph(6)
|
| 144 |
+
G.remove_edge(0, 1)
|
| 145 |
+
k = 1
|
| 146 |
+
b, g = nx.prominent_group(G, k, weight=None, normalized=False)
|
| 147 |
+
b_answer, g_answer = 4.0, [3]
|
| 148 |
+
assert b == b_answer and g == g_answer
|
| 149 |
+
|
| 150 |
+
def test_prominent_group_node_not_in_graph(self):
|
| 151 |
+
"""
|
| 152 |
+
Node(s) in C not in graph, raises NodeNotFound exception
|
| 153 |
+
"""
|
| 154 |
+
with pytest.raises(nx.NodeNotFound):
|
| 155 |
+
nx.prominent_group(nx.path_graph(5), 1, C=[10])
|
| 156 |
+
|
| 157 |
+
def test_group_betweenness_directed_weighted(self):
|
| 158 |
+
"""
|
| 159 |
+
Group betweenness centrality in a directed and weighted graph
|
| 160 |
+
"""
|
| 161 |
+
G = nx.DiGraph()
|
| 162 |
+
G.add_edge(1, 0, weight=1)
|
| 163 |
+
G.add_edge(0, 2, weight=2)
|
| 164 |
+
G.add_edge(1, 2, weight=3)
|
| 165 |
+
G.add_edge(3, 1, weight=4)
|
| 166 |
+
G.add_edge(2, 3, weight=1)
|
| 167 |
+
G.add_edge(4, 3, weight=6)
|
| 168 |
+
G.add_edge(2, 4, weight=7)
|
| 169 |
+
k = 2
|
| 170 |
+
b, g = nx.prominent_group(G, k, weight="weight", normalized=False)
|
| 171 |
+
b_answer, g_answer = 5.0, [1, 2]
|
| 172 |
+
assert b == b_answer and g == g_answer
|
| 173 |
+
|
| 174 |
+
def test_prominent_group_greedy_algorithm(self):
|
| 175 |
+
"""
|
| 176 |
+
Group betweenness centrality in a greedy algorithm
|
| 177 |
+
"""
|
| 178 |
+
G = nx.cycle_graph(7)
|
| 179 |
+
k = 2
|
| 180 |
+
b, g = nx.prominent_group(G, k, normalized=True, endpoints=True, greedy=True)
|
| 181 |
+
b_answer, g_answer = 1.7, [6, 3]
|
| 182 |
+
assert b == b_answer and g == g_answer
|
| 183 |
+
|
| 184 |
+
|
| 185 |
+
class TestGroupClosenessCentrality:
|
| 186 |
+
def test_group_closeness_single_node(self):
|
| 187 |
+
"""
|
| 188 |
+
Group closeness centrality for a single node group
|
| 189 |
+
"""
|
| 190 |
+
G = nx.path_graph(5)
|
| 191 |
+
c = nx.group_closeness_centrality(G, [1])
|
| 192 |
+
c_answer = nx.closeness_centrality(G, 1)
|
| 193 |
+
assert c == c_answer
|
| 194 |
+
|
| 195 |
+
def test_group_closeness_disconnected(self):
|
| 196 |
+
"""
|
| 197 |
+
Group closeness centrality for a disconnected graph
|
| 198 |
+
"""
|
| 199 |
+
G = nx.Graph()
|
| 200 |
+
G.add_nodes_from([1, 2, 3, 4])
|
| 201 |
+
c = nx.group_closeness_centrality(G, [1, 2])
|
| 202 |
+
c_answer = 0
|
| 203 |
+
assert c == c_answer
|
| 204 |
+
|
| 205 |
+
def test_group_closeness_multiple_node(self):
|
| 206 |
+
"""
|
| 207 |
+
Group closeness centrality for a group with more than
|
| 208 |
+
1 node
|
| 209 |
+
"""
|
| 210 |
+
G = nx.path_graph(4)
|
| 211 |
+
c = nx.group_closeness_centrality(G, [1, 2])
|
| 212 |
+
c_answer = 1
|
| 213 |
+
assert c == c_answer
|
| 214 |
+
|
| 215 |
+
def test_group_closeness_node_not_in_graph(self):
|
| 216 |
+
"""
|
| 217 |
+
Node(s) in S not in graph, raises NodeNotFound exception
|
| 218 |
+
"""
|
| 219 |
+
with pytest.raises(nx.NodeNotFound):
|
| 220 |
+
nx.group_closeness_centrality(nx.path_graph(5), [6, 7, 8])
|
| 221 |
+
|
| 222 |
+
|
| 223 |
+
class TestGroupDegreeCentrality:
|
| 224 |
+
def test_group_degree_centrality_single_node(self):
|
| 225 |
+
"""
|
| 226 |
+
Group degree centrality for a single node group
|
| 227 |
+
"""
|
| 228 |
+
G = nx.path_graph(4)
|
| 229 |
+
d = nx.group_degree_centrality(G, [1])
|
| 230 |
+
d_answer = nx.degree_centrality(G)[1]
|
| 231 |
+
assert d == d_answer
|
| 232 |
+
|
| 233 |
+
def test_group_degree_centrality_multiple_node(self):
|
| 234 |
+
"""
|
| 235 |
+
Group degree centrality for group with more than
|
| 236 |
+
1 node
|
| 237 |
+
"""
|
| 238 |
+
G = nx.Graph()
|
| 239 |
+
G.add_nodes_from([1, 2, 3, 4, 5, 6, 7, 8])
|
| 240 |
+
G.add_edges_from(
|
| 241 |
+
[(1, 2), (1, 3), (1, 6), (1, 7), (1, 8), (2, 3), (2, 4), (2, 5)]
|
| 242 |
+
)
|
| 243 |
+
d = nx.group_degree_centrality(G, [1, 2])
|
| 244 |
+
d_answer = 1
|
| 245 |
+
assert d == d_answer
|
| 246 |
+
|
| 247 |
+
def test_group_in_degree_centrality(self):
|
| 248 |
+
"""
|
| 249 |
+
Group in-degree centrality in a DiGraph
|
| 250 |
+
"""
|
| 251 |
+
G = nx.DiGraph()
|
| 252 |
+
G.add_nodes_from([1, 2, 3, 4, 5, 6, 7, 8])
|
| 253 |
+
G.add_edges_from(
|
| 254 |
+
[(1, 2), (1, 3), (1, 6), (1, 7), (1, 8), (2, 3), (2, 4), (2, 5)]
|
| 255 |
+
)
|
| 256 |
+
d = nx.group_in_degree_centrality(G, [1, 2])
|
| 257 |
+
d_answer = 0
|
| 258 |
+
assert d == d_answer
|
| 259 |
+
|
| 260 |
+
def test_group_out_degree_centrality(self):
|
| 261 |
+
"""
|
| 262 |
+
Group out-degree centrality in a DiGraph
|
| 263 |
+
"""
|
| 264 |
+
G = nx.DiGraph()
|
| 265 |
+
G.add_nodes_from([1, 2, 3, 4, 5, 6, 7, 8])
|
| 266 |
+
G.add_edges_from(
|
| 267 |
+
[(1, 2), (1, 3), (1, 6), (1, 7), (1, 8), (2, 3), (2, 4), (2, 5)]
|
| 268 |
+
)
|
| 269 |
+
d = nx.group_out_degree_centrality(G, [1, 2])
|
| 270 |
+
d_answer = 1
|
| 271 |
+
assert d == d_answer
|
| 272 |
+
|
| 273 |
+
def test_group_degree_centrality_node_not_in_graph(self):
|
| 274 |
+
"""
|
| 275 |
+
Node(s) in S not in graph, raises NetworkXError
|
| 276 |
+
"""
|
| 277 |
+
with pytest.raises(nx.NetworkXError):
|
| 278 |
+
nx.group_degree_centrality(nx.path_graph(5), [6, 7, 8])
|
pythonProject/.venv/Lib/site-packages/networkx/algorithms/centrality/tests/test_harmonic_centrality.py
ADDED
|
@@ -0,0 +1,115 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
"""
|
| 2 |
+
Tests for degree centrality.
|
| 3 |
+
"""
|
| 4 |
+
import pytest
|
| 5 |
+
|
| 6 |
+
import networkx as nx
|
| 7 |
+
from networkx.algorithms.centrality import harmonic_centrality
|
| 8 |
+
|
| 9 |
+
|
| 10 |
+
class TestClosenessCentrality:
|
| 11 |
+
@classmethod
|
| 12 |
+
def setup_class(cls):
|
| 13 |
+
cls.P3 = nx.path_graph(3)
|
| 14 |
+
cls.P4 = nx.path_graph(4)
|
| 15 |
+
cls.K5 = nx.complete_graph(5)
|
| 16 |
+
|
| 17 |
+
cls.C4 = nx.cycle_graph(4)
|
| 18 |
+
cls.C4_directed = nx.cycle_graph(4, create_using=nx.DiGraph)
|
| 19 |
+
|
| 20 |
+
cls.C5 = nx.cycle_graph(5)
|
| 21 |
+
|
| 22 |
+
cls.T = nx.balanced_tree(r=2, h=2)
|
| 23 |
+
|
| 24 |
+
cls.Gb = nx.DiGraph()
|
| 25 |
+
cls.Gb.add_edges_from([(0, 1), (0, 2), (0, 4), (2, 1), (2, 3), (4, 3)])
|
| 26 |
+
|
| 27 |
+
def test_p3_harmonic(self):
|
| 28 |
+
c = harmonic_centrality(self.P3)
|
| 29 |
+
d = {0: 1.5, 1: 2, 2: 1.5}
|
| 30 |
+
for n in sorted(self.P3):
|
| 31 |
+
assert c[n] == pytest.approx(d[n], abs=1e-3)
|
| 32 |
+
|
| 33 |
+
def test_p4_harmonic(self):
|
| 34 |
+
c = harmonic_centrality(self.P4)
|
| 35 |
+
d = {0: 1.8333333, 1: 2.5, 2: 2.5, 3: 1.8333333}
|
| 36 |
+
for n in sorted(self.P4):
|
| 37 |
+
assert c[n] == pytest.approx(d[n], abs=1e-3)
|
| 38 |
+
|
| 39 |
+
def test_clique_complete(self):
|
| 40 |
+
c = harmonic_centrality(self.K5)
|
| 41 |
+
d = {0: 4, 1: 4, 2: 4, 3: 4, 4: 4}
|
| 42 |
+
for n in sorted(self.P3):
|
| 43 |
+
assert c[n] == pytest.approx(d[n], abs=1e-3)
|
| 44 |
+
|
| 45 |
+
def test_cycle_C4(self):
|
| 46 |
+
c = harmonic_centrality(self.C4)
|
| 47 |
+
d = {0: 2.5, 1: 2.5, 2: 2.5, 3: 2.5}
|
| 48 |
+
for n in sorted(self.C4):
|
| 49 |
+
assert c[n] == pytest.approx(d[n], abs=1e-3)
|
| 50 |
+
|
| 51 |
+
def test_cycle_C5(self):
|
| 52 |
+
c = harmonic_centrality(self.C5)
|
| 53 |
+
d = {0: 3, 1: 3, 2: 3, 3: 3, 4: 3, 5: 4}
|
| 54 |
+
for n in sorted(self.C5):
|
| 55 |
+
assert c[n] == pytest.approx(d[n], abs=1e-3)
|
| 56 |
+
|
| 57 |
+
def test_bal_tree(self):
|
| 58 |
+
c = harmonic_centrality(self.T)
|
| 59 |
+
d = {0: 4.0, 1: 4.1666, 2: 4.1666, 3: 2.8333, 4: 2.8333, 5: 2.8333, 6: 2.8333}
|
| 60 |
+
for n in sorted(self.T):
|
| 61 |
+
assert c[n] == pytest.approx(d[n], abs=1e-3)
|
| 62 |
+
|
| 63 |
+
def test_exampleGraph(self):
|
| 64 |
+
c = harmonic_centrality(self.Gb)
|
| 65 |
+
d = {0: 0, 1: 2, 2: 1, 3: 2.5, 4: 1}
|
| 66 |
+
for n in sorted(self.Gb):
|
| 67 |
+
assert c[n] == pytest.approx(d[n], abs=1e-3)
|
| 68 |
+
|
| 69 |
+
def test_weighted_harmonic(self):
|
| 70 |
+
XG = nx.DiGraph()
|
| 71 |
+
XG.add_weighted_edges_from(
|
| 72 |
+
[
|
| 73 |
+
("a", "b", 10),
|
| 74 |
+
("d", "c", 5),
|
| 75 |
+
("a", "c", 1),
|
| 76 |
+
("e", "f", 2),
|
| 77 |
+
("f", "c", 1),
|
| 78 |
+
("a", "f", 3),
|
| 79 |
+
]
|
| 80 |
+
)
|
| 81 |
+
c = harmonic_centrality(XG, distance="weight")
|
| 82 |
+
d = {"a": 0, "b": 0.1, "c": 2.533, "d": 0, "e": 0, "f": 0.83333}
|
| 83 |
+
for n in sorted(XG):
|
| 84 |
+
assert c[n] == pytest.approx(d[n], abs=1e-3)
|
| 85 |
+
|
| 86 |
+
def test_empty(self):
|
| 87 |
+
G = nx.DiGraph()
|
| 88 |
+
c = harmonic_centrality(G, distance="weight")
|
| 89 |
+
d = {}
|
| 90 |
+
assert c == d
|
| 91 |
+
|
| 92 |
+
def test_singleton(self):
|
| 93 |
+
G = nx.DiGraph()
|
| 94 |
+
G.add_node(0)
|
| 95 |
+
c = harmonic_centrality(G, distance="weight")
|
| 96 |
+
d = {0: 0}
|
| 97 |
+
assert c == d
|
| 98 |
+
|
| 99 |
+
def test_cycle_c4_directed(self):
|
| 100 |
+
c = harmonic_centrality(self.C4_directed, nbunch=[0, 1], sources=[1, 2])
|
| 101 |
+
d = {0: 0.833, 1: 0.333}
|
| 102 |
+
for n in [0, 1]:
|
| 103 |
+
assert c[n] == pytest.approx(d[n], abs=1e-3)
|
| 104 |
+
|
| 105 |
+
def test_p3_harmonic_subset(self):
|
| 106 |
+
c = harmonic_centrality(self.P3, sources=[0, 1])
|
| 107 |
+
d = {0: 1, 1: 1, 2: 1.5}
|
| 108 |
+
for n in self.P3:
|
| 109 |
+
assert c[n] == pytest.approx(d[n], abs=1e-3)
|
| 110 |
+
|
| 111 |
+
def test_p4_harmonic_subset(self):
|
| 112 |
+
c = harmonic_centrality(self.P4, nbunch=[2, 3], sources=[0, 1])
|
| 113 |
+
d = {2: 1.5, 3: 0.8333333}
|
| 114 |
+
for n in [2, 3]:
|
| 115 |
+
assert c[n] == pytest.approx(d[n], abs=1e-3)
|
pythonProject/.venv/Lib/site-packages/networkx/algorithms/centrality/tests/test_katz_centrality.py
ADDED
|
@@ -0,0 +1,345 @@
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|
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|
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|
|
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|
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|
|
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|
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|
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|
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|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
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|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
import math
|
| 2 |
+
|
| 3 |
+
import pytest
|
| 4 |
+
|
| 5 |
+
import networkx as nx
|
| 6 |
+
|
| 7 |
+
|
| 8 |
+
class TestKatzCentrality:
|
| 9 |
+
def test_K5(self):
|
| 10 |
+
"""Katz centrality: K5"""
|
| 11 |
+
G = nx.complete_graph(5)
|
| 12 |
+
alpha = 0.1
|
| 13 |
+
b = nx.katz_centrality(G, alpha)
|
| 14 |
+
v = math.sqrt(1 / 5.0)
|
| 15 |
+
b_answer = dict.fromkeys(G, v)
|
| 16 |
+
for n in sorted(G):
|
| 17 |
+
assert b[n] == pytest.approx(b_answer[n], abs=1e-7)
|
| 18 |
+
nstart = {n: 1 for n in G}
|
| 19 |
+
b = nx.katz_centrality(G, alpha, nstart=nstart)
|
| 20 |
+
for n in sorted(G):
|
| 21 |
+
assert b[n] == pytest.approx(b_answer[n], abs=1e-7)
|
| 22 |
+
|
| 23 |
+
def test_P3(self):
|
| 24 |
+
"""Katz centrality: P3"""
|
| 25 |
+
alpha = 0.1
|
| 26 |
+
G = nx.path_graph(3)
|
| 27 |
+
b_answer = {0: 0.5598852584152165, 1: 0.6107839182711449, 2: 0.5598852584152162}
|
| 28 |
+
b = nx.katz_centrality(G, alpha)
|
| 29 |
+
for n in sorted(G):
|
| 30 |
+
assert b[n] == pytest.approx(b_answer[n], abs=1e-4)
|
| 31 |
+
|
| 32 |
+
def test_maxiter(self):
|
| 33 |
+
with pytest.raises(nx.PowerIterationFailedConvergence):
|
| 34 |
+
nx.katz_centrality(nx.path_graph(3), 0.1, max_iter=0)
|
| 35 |
+
|
| 36 |
+
def test_beta_as_scalar(self):
|
| 37 |
+
alpha = 0.1
|
| 38 |
+
beta = 0.1
|
| 39 |
+
b_answer = {0: 0.5598852584152165, 1: 0.6107839182711449, 2: 0.5598852584152162}
|
| 40 |
+
G = nx.path_graph(3)
|
| 41 |
+
b = nx.katz_centrality(G, alpha, beta)
|
| 42 |
+
for n in sorted(G):
|
| 43 |
+
assert b[n] == pytest.approx(b_answer[n], abs=1e-4)
|
| 44 |
+
|
| 45 |
+
def test_beta_as_dict(self):
|
| 46 |
+
alpha = 0.1
|
| 47 |
+
beta = {0: 1.0, 1: 1.0, 2: 1.0}
|
| 48 |
+
b_answer = {0: 0.5598852584152165, 1: 0.6107839182711449, 2: 0.5598852584152162}
|
| 49 |
+
G = nx.path_graph(3)
|
| 50 |
+
b = nx.katz_centrality(G, alpha, beta)
|
| 51 |
+
for n in sorted(G):
|
| 52 |
+
assert b[n] == pytest.approx(b_answer[n], abs=1e-4)
|
| 53 |
+
|
| 54 |
+
def test_multiple_alpha(self):
|
| 55 |
+
alpha_list = [0.1, 0.2, 0.3, 0.4, 0.5, 0.6]
|
| 56 |
+
for alpha in alpha_list:
|
| 57 |
+
b_answer = {
|
| 58 |
+
0.1: {
|
| 59 |
+
0: 0.5598852584152165,
|
| 60 |
+
1: 0.6107839182711449,
|
| 61 |
+
2: 0.5598852584152162,
|
| 62 |
+
},
|
| 63 |
+
0.2: {
|
| 64 |
+
0: 0.5454545454545454,
|
| 65 |
+
1: 0.6363636363636365,
|
| 66 |
+
2: 0.5454545454545454,
|
| 67 |
+
},
|
| 68 |
+
0.3: {
|
| 69 |
+
0: 0.5333964609104419,
|
| 70 |
+
1: 0.6564879518897746,
|
| 71 |
+
2: 0.5333964609104419,
|
| 72 |
+
},
|
| 73 |
+
0.4: {
|
| 74 |
+
0: 0.5232045649263551,
|
| 75 |
+
1: 0.6726915834767423,
|
| 76 |
+
2: 0.5232045649263551,
|
| 77 |
+
},
|
| 78 |
+
0.5: {
|
| 79 |
+
0: 0.5144957746691622,
|
| 80 |
+
1: 0.6859943117075809,
|
| 81 |
+
2: 0.5144957746691622,
|
| 82 |
+
},
|
| 83 |
+
0.6: {
|
| 84 |
+
0: 0.5069794004195823,
|
| 85 |
+
1: 0.6970966755769258,
|
| 86 |
+
2: 0.5069794004195823,
|
| 87 |
+
},
|
| 88 |
+
}
|
| 89 |
+
G = nx.path_graph(3)
|
| 90 |
+
b = nx.katz_centrality(G, alpha)
|
| 91 |
+
for n in sorted(G):
|
| 92 |
+
assert b[n] == pytest.approx(b_answer[alpha][n], abs=1e-4)
|
| 93 |
+
|
| 94 |
+
def test_multigraph(self):
|
| 95 |
+
with pytest.raises(nx.NetworkXException):
|
| 96 |
+
nx.katz_centrality(nx.MultiGraph(), 0.1)
|
| 97 |
+
|
| 98 |
+
def test_empty(self):
|
| 99 |
+
e = nx.katz_centrality(nx.Graph(), 0.1)
|
| 100 |
+
assert e == {}
|
| 101 |
+
|
| 102 |
+
def test_bad_beta(self):
|
| 103 |
+
with pytest.raises(nx.NetworkXException):
|
| 104 |
+
G = nx.Graph([(0, 1)])
|
| 105 |
+
beta = {0: 77}
|
| 106 |
+
nx.katz_centrality(G, 0.1, beta=beta)
|
| 107 |
+
|
| 108 |
+
def test_bad_beta_number(self):
|
| 109 |
+
with pytest.raises(nx.NetworkXException):
|
| 110 |
+
G = nx.Graph([(0, 1)])
|
| 111 |
+
nx.katz_centrality(G, 0.1, beta="foo")
|
| 112 |
+
|
| 113 |
+
|
| 114 |
+
class TestKatzCentralityNumpy:
|
| 115 |
+
@classmethod
|
| 116 |
+
def setup_class(cls):
|
| 117 |
+
global np
|
| 118 |
+
np = pytest.importorskip("numpy")
|
| 119 |
+
pytest.importorskip("scipy")
|
| 120 |
+
|
| 121 |
+
def test_K5(self):
|
| 122 |
+
"""Katz centrality: K5"""
|
| 123 |
+
G = nx.complete_graph(5)
|
| 124 |
+
alpha = 0.1
|
| 125 |
+
b = nx.katz_centrality(G, alpha)
|
| 126 |
+
v = math.sqrt(1 / 5.0)
|
| 127 |
+
b_answer = dict.fromkeys(G, v)
|
| 128 |
+
for n in sorted(G):
|
| 129 |
+
assert b[n] == pytest.approx(b_answer[n], abs=1e-7)
|
| 130 |
+
b = nx.eigenvector_centrality_numpy(G)
|
| 131 |
+
for n in sorted(G):
|
| 132 |
+
assert b[n] == pytest.approx(b_answer[n], abs=1e-3)
|
| 133 |
+
|
| 134 |
+
def test_P3(self):
|
| 135 |
+
"""Katz centrality: P3"""
|
| 136 |
+
alpha = 0.1
|
| 137 |
+
G = nx.path_graph(3)
|
| 138 |
+
b_answer = {0: 0.5598852584152165, 1: 0.6107839182711449, 2: 0.5598852584152162}
|
| 139 |
+
b = nx.katz_centrality_numpy(G, alpha)
|
| 140 |
+
for n in sorted(G):
|
| 141 |
+
assert b[n] == pytest.approx(b_answer[n], abs=1e-4)
|
| 142 |
+
|
| 143 |
+
def test_beta_as_scalar(self):
|
| 144 |
+
alpha = 0.1
|
| 145 |
+
beta = 0.1
|
| 146 |
+
b_answer = {0: 0.5598852584152165, 1: 0.6107839182711449, 2: 0.5598852584152162}
|
| 147 |
+
G = nx.path_graph(3)
|
| 148 |
+
b = nx.katz_centrality_numpy(G, alpha, beta)
|
| 149 |
+
for n in sorted(G):
|
| 150 |
+
assert b[n] == pytest.approx(b_answer[n], abs=1e-4)
|
| 151 |
+
|
| 152 |
+
def test_beta_as_dict(self):
|
| 153 |
+
alpha = 0.1
|
| 154 |
+
beta = {0: 1.0, 1: 1.0, 2: 1.0}
|
| 155 |
+
b_answer = {0: 0.5598852584152165, 1: 0.6107839182711449, 2: 0.5598852584152162}
|
| 156 |
+
G = nx.path_graph(3)
|
| 157 |
+
b = nx.katz_centrality_numpy(G, alpha, beta)
|
| 158 |
+
for n in sorted(G):
|
| 159 |
+
assert b[n] == pytest.approx(b_answer[n], abs=1e-4)
|
| 160 |
+
|
| 161 |
+
def test_multiple_alpha(self):
|
| 162 |
+
alpha_list = [0.1, 0.2, 0.3, 0.4, 0.5, 0.6]
|
| 163 |
+
for alpha in alpha_list:
|
| 164 |
+
b_answer = {
|
| 165 |
+
0.1: {
|
| 166 |
+
0: 0.5598852584152165,
|
| 167 |
+
1: 0.6107839182711449,
|
| 168 |
+
2: 0.5598852584152162,
|
| 169 |
+
},
|
| 170 |
+
0.2: {
|
| 171 |
+
0: 0.5454545454545454,
|
| 172 |
+
1: 0.6363636363636365,
|
| 173 |
+
2: 0.5454545454545454,
|
| 174 |
+
},
|
| 175 |
+
0.3: {
|
| 176 |
+
0: 0.5333964609104419,
|
| 177 |
+
1: 0.6564879518897746,
|
| 178 |
+
2: 0.5333964609104419,
|
| 179 |
+
},
|
| 180 |
+
0.4: {
|
| 181 |
+
0: 0.5232045649263551,
|
| 182 |
+
1: 0.6726915834767423,
|
| 183 |
+
2: 0.5232045649263551,
|
| 184 |
+
},
|
| 185 |
+
0.5: {
|
| 186 |
+
0: 0.5144957746691622,
|
| 187 |
+
1: 0.6859943117075809,
|
| 188 |
+
2: 0.5144957746691622,
|
| 189 |
+
},
|
| 190 |
+
0.6: {
|
| 191 |
+
0: 0.5069794004195823,
|
| 192 |
+
1: 0.6970966755769258,
|
| 193 |
+
2: 0.5069794004195823,
|
| 194 |
+
},
|
| 195 |
+
}
|
| 196 |
+
G = nx.path_graph(3)
|
| 197 |
+
b = nx.katz_centrality_numpy(G, alpha)
|
| 198 |
+
for n in sorted(G):
|
| 199 |
+
assert b[n] == pytest.approx(b_answer[alpha][n], abs=1e-4)
|
| 200 |
+
|
| 201 |
+
def test_multigraph(self):
|
| 202 |
+
with pytest.raises(nx.NetworkXException):
|
| 203 |
+
nx.katz_centrality(nx.MultiGraph(), 0.1)
|
| 204 |
+
|
| 205 |
+
def test_empty(self):
|
| 206 |
+
e = nx.katz_centrality(nx.Graph(), 0.1)
|
| 207 |
+
assert e == {}
|
| 208 |
+
|
| 209 |
+
def test_bad_beta(self):
|
| 210 |
+
with pytest.raises(nx.NetworkXException):
|
| 211 |
+
G = nx.Graph([(0, 1)])
|
| 212 |
+
beta = {0: 77}
|
| 213 |
+
nx.katz_centrality_numpy(G, 0.1, beta=beta)
|
| 214 |
+
|
| 215 |
+
def test_bad_beta_numbe(self):
|
| 216 |
+
with pytest.raises(nx.NetworkXException):
|
| 217 |
+
G = nx.Graph([(0, 1)])
|
| 218 |
+
nx.katz_centrality_numpy(G, 0.1, beta="foo")
|
| 219 |
+
|
| 220 |
+
def test_K5_unweighted(self):
|
| 221 |
+
"""Katz centrality: K5"""
|
| 222 |
+
G = nx.complete_graph(5)
|
| 223 |
+
alpha = 0.1
|
| 224 |
+
b = nx.katz_centrality(G, alpha, weight=None)
|
| 225 |
+
v = math.sqrt(1 / 5.0)
|
| 226 |
+
b_answer = dict.fromkeys(G, v)
|
| 227 |
+
for n in sorted(G):
|
| 228 |
+
assert b[n] == pytest.approx(b_answer[n], abs=1e-7)
|
| 229 |
+
b = nx.eigenvector_centrality_numpy(G, weight=None)
|
| 230 |
+
for n in sorted(G):
|
| 231 |
+
assert b[n] == pytest.approx(b_answer[n], abs=1e-3)
|
| 232 |
+
|
| 233 |
+
def test_P3_unweighted(self):
|
| 234 |
+
"""Katz centrality: P3"""
|
| 235 |
+
alpha = 0.1
|
| 236 |
+
G = nx.path_graph(3)
|
| 237 |
+
b_answer = {0: 0.5598852584152165, 1: 0.6107839182711449, 2: 0.5598852584152162}
|
| 238 |
+
b = nx.katz_centrality_numpy(G, alpha, weight=None)
|
| 239 |
+
for n in sorted(G):
|
| 240 |
+
assert b[n] == pytest.approx(b_answer[n], abs=1e-4)
|
| 241 |
+
|
| 242 |
+
|
| 243 |
+
class TestKatzCentralityDirected:
|
| 244 |
+
@classmethod
|
| 245 |
+
def setup_class(cls):
|
| 246 |
+
G = nx.DiGraph()
|
| 247 |
+
edges = [
|
| 248 |
+
(1, 2),
|
| 249 |
+
(1, 3),
|
| 250 |
+
(2, 4),
|
| 251 |
+
(3, 2),
|
| 252 |
+
(3, 5),
|
| 253 |
+
(4, 2),
|
| 254 |
+
(4, 5),
|
| 255 |
+
(4, 6),
|
| 256 |
+
(5, 6),
|
| 257 |
+
(5, 7),
|
| 258 |
+
(5, 8),
|
| 259 |
+
(6, 8),
|
| 260 |
+
(7, 1),
|
| 261 |
+
(7, 5),
|
| 262 |
+
(7, 8),
|
| 263 |
+
(8, 6),
|
| 264 |
+
(8, 7),
|
| 265 |
+
]
|
| 266 |
+
G.add_edges_from(edges, weight=2.0)
|
| 267 |
+
cls.G = G.reverse()
|
| 268 |
+
cls.G.alpha = 0.1
|
| 269 |
+
cls.G.evc = [
|
| 270 |
+
0.3289589783189635,
|
| 271 |
+
0.2832077296243516,
|
| 272 |
+
0.3425906003685471,
|
| 273 |
+
0.3970420865198392,
|
| 274 |
+
0.41074871061646284,
|
| 275 |
+
0.272257430756461,
|
| 276 |
+
0.4201989685435462,
|
| 277 |
+
0.34229059218038554,
|
| 278 |
+
]
|
| 279 |
+
|
| 280 |
+
H = nx.DiGraph(edges)
|
| 281 |
+
cls.H = G.reverse()
|
| 282 |
+
cls.H.alpha = 0.1
|
| 283 |
+
cls.H.evc = [
|
| 284 |
+
0.3289589783189635,
|
| 285 |
+
0.2832077296243516,
|
| 286 |
+
0.3425906003685471,
|
| 287 |
+
0.3970420865198392,
|
| 288 |
+
0.41074871061646284,
|
| 289 |
+
0.272257430756461,
|
| 290 |
+
0.4201989685435462,
|
| 291 |
+
0.34229059218038554,
|
| 292 |
+
]
|
| 293 |
+
|
| 294 |
+
def test_katz_centrality_weighted(self):
|
| 295 |
+
G = self.G
|
| 296 |
+
alpha = self.G.alpha
|
| 297 |
+
p = nx.katz_centrality(G, alpha, weight="weight")
|
| 298 |
+
for a, b in zip(list(p.values()), self.G.evc):
|
| 299 |
+
assert a == pytest.approx(b, abs=1e-7)
|
| 300 |
+
|
| 301 |
+
def test_katz_centrality_unweighted(self):
|
| 302 |
+
H = self.H
|
| 303 |
+
alpha = self.H.alpha
|
| 304 |
+
p = nx.katz_centrality(H, alpha, weight="weight")
|
| 305 |
+
for a, b in zip(list(p.values()), self.H.evc):
|
| 306 |
+
assert a == pytest.approx(b, abs=1e-7)
|
| 307 |
+
|
| 308 |
+
|
| 309 |
+
class TestKatzCentralityDirectedNumpy(TestKatzCentralityDirected):
|
| 310 |
+
@classmethod
|
| 311 |
+
def setup_class(cls):
|
| 312 |
+
global np
|
| 313 |
+
np = pytest.importorskip("numpy")
|
| 314 |
+
pytest.importorskip("scipy")
|
| 315 |
+
super().setup_class()
|
| 316 |
+
|
| 317 |
+
def test_katz_centrality_weighted(self):
|
| 318 |
+
G = self.G
|
| 319 |
+
alpha = self.G.alpha
|
| 320 |
+
p = nx.katz_centrality_numpy(G, alpha, weight="weight")
|
| 321 |
+
for a, b in zip(list(p.values()), self.G.evc):
|
| 322 |
+
assert a == pytest.approx(b, abs=1e-7)
|
| 323 |
+
|
| 324 |
+
def test_katz_centrality_unweighted(self):
|
| 325 |
+
H = self.H
|
| 326 |
+
alpha = self.H.alpha
|
| 327 |
+
p = nx.katz_centrality_numpy(H, alpha, weight="weight")
|
| 328 |
+
for a, b in zip(list(p.values()), self.H.evc):
|
| 329 |
+
assert a == pytest.approx(b, abs=1e-7)
|
| 330 |
+
|
| 331 |
+
|
| 332 |
+
class TestKatzEigenvectorVKatz:
|
| 333 |
+
@classmethod
|
| 334 |
+
def setup_class(cls):
|
| 335 |
+
global np
|
| 336 |
+
np = pytest.importorskip("numpy")
|
| 337 |
+
pytest.importorskip("scipy")
|
| 338 |
+
|
| 339 |
+
def test_eigenvector_v_katz_random(self):
|
| 340 |
+
G = nx.gnp_random_graph(10, 0.5, seed=1234)
|
| 341 |
+
l = max(np.linalg.eigvals(nx.adjacency_matrix(G).todense()))
|
| 342 |
+
e = nx.eigenvector_centrality_numpy(G)
|
| 343 |
+
k = nx.katz_centrality_numpy(G, 1.0 / l)
|
| 344 |
+
for n in G:
|
| 345 |
+
assert e[n] == pytest.approx(k[n], abs=1e-7)
|
pythonProject/.venv/Lib/site-packages/networkx/algorithms/centrality/tests/test_laplacian_centrality.py
ADDED
|
@@ -0,0 +1,221 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
import pytest
|
| 2 |
+
|
| 3 |
+
import networkx as nx
|
| 4 |
+
|
| 5 |
+
np = pytest.importorskip("numpy")
|
| 6 |
+
sp = pytest.importorskip("scipy")
|
| 7 |
+
|
| 8 |
+
|
| 9 |
+
def test_laplacian_centrality_null_graph():
|
| 10 |
+
G = nx.Graph()
|
| 11 |
+
with pytest.raises(nx.NetworkXPointlessConcept):
|
| 12 |
+
d = nx.laplacian_centrality(G, normalized=False)
|
| 13 |
+
|
| 14 |
+
|
| 15 |
+
def test_laplacian_centrality_single_node():
|
| 16 |
+
"""See gh-6571"""
|
| 17 |
+
G = nx.empty_graph(1)
|
| 18 |
+
assert nx.laplacian_centrality(G, normalized=False) == {0: 0}
|
| 19 |
+
with pytest.raises(ZeroDivisionError):
|
| 20 |
+
nx.laplacian_centrality(G, normalized=True)
|
| 21 |
+
|
| 22 |
+
|
| 23 |
+
def test_laplacian_centrality_unconnected_nodes():
|
| 24 |
+
"""laplacian_centrality on a unconnected node graph should return 0
|
| 25 |
+
|
| 26 |
+
For graphs without edges, the Laplacian energy is 0 and is unchanged with
|
| 27 |
+
node removal, so::
|
| 28 |
+
|
| 29 |
+
LC(v) = LE(G) - LE(G - v) = 0 - 0 = 0
|
| 30 |
+
"""
|
| 31 |
+
G = nx.empty_graph(3)
|
| 32 |
+
assert nx.laplacian_centrality(G, normalized=False) == {0: 0, 1: 0, 2: 0}
|
| 33 |
+
|
| 34 |
+
|
| 35 |
+
def test_laplacian_centrality_empty_graph():
|
| 36 |
+
G = nx.empty_graph(3)
|
| 37 |
+
with pytest.raises(ZeroDivisionError):
|
| 38 |
+
d = nx.laplacian_centrality(G, normalized=True)
|
| 39 |
+
|
| 40 |
+
|
| 41 |
+
def test_laplacian_centrality_E():
|
| 42 |
+
E = nx.Graph()
|
| 43 |
+
E.add_weighted_edges_from(
|
| 44 |
+
[(0, 1, 4), (4, 5, 1), (0, 2, 2), (2, 1, 1), (1, 3, 2), (1, 4, 2)]
|
| 45 |
+
)
|
| 46 |
+
d = nx.laplacian_centrality(E)
|
| 47 |
+
exact = {
|
| 48 |
+
0: 0.700000,
|
| 49 |
+
1: 0.900000,
|
| 50 |
+
2: 0.280000,
|
| 51 |
+
3: 0.220000,
|
| 52 |
+
4: 0.260000,
|
| 53 |
+
5: 0.040000,
|
| 54 |
+
}
|
| 55 |
+
|
| 56 |
+
for n, dc in d.items():
|
| 57 |
+
assert exact[n] == pytest.approx(dc, abs=1e-7)
|
| 58 |
+
|
| 59 |
+
# Check not normalized
|
| 60 |
+
full_energy = 200
|
| 61 |
+
dnn = nx.laplacian_centrality(E, normalized=False)
|
| 62 |
+
for n, dc in dnn.items():
|
| 63 |
+
assert exact[n] * full_energy == pytest.approx(dc, abs=1e-7)
|
| 64 |
+
|
| 65 |
+
# Check unweighted not-normalized version
|
| 66 |
+
duw_nn = nx.laplacian_centrality(E, normalized=False, weight=None)
|
| 67 |
+
print(duw_nn)
|
| 68 |
+
exact_uw_nn = {
|
| 69 |
+
0: 18,
|
| 70 |
+
1: 34,
|
| 71 |
+
2: 18,
|
| 72 |
+
3: 10,
|
| 73 |
+
4: 16,
|
| 74 |
+
5: 6,
|
| 75 |
+
}
|
| 76 |
+
for n, dc in duw_nn.items():
|
| 77 |
+
assert exact_uw_nn[n] == pytest.approx(dc, abs=1e-7)
|
| 78 |
+
|
| 79 |
+
# Check unweighted version
|
| 80 |
+
duw = nx.laplacian_centrality(E, weight=None)
|
| 81 |
+
full_energy = 42
|
| 82 |
+
for n, dc in duw.items():
|
| 83 |
+
assert exact_uw_nn[n] / full_energy == pytest.approx(dc, abs=1e-7)
|
| 84 |
+
|
| 85 |
+
|
| 86 |
+
def test_laplacian_centrality_KC():
|
| 87 |
+
KC = nx.karate_club_graph()
|
| 88 |
+
d = nx.laplacian_centrality(KC)
|
| 89 |
+
exact = {
|
| 90 |
+
0: 0.2543593,
|
| 91 |
+
1: 0.1724524,
|
| 92 |
+
2: 0.2166053,
|
| 93 |
+
3: 0.0964646,
|
| 94 |
+
4: 0.0350344,
|
| 95 |
+
5: 0.0571109,
|
| 96 |
+
6: 0.0540713,
|
| 97 |
+
7: 0.0788674,
|
| 98 |
+
8: 0.1222204,
|
| 99 |
+
9: 0.0217565,
|
| 100 |
+
10: 0.0308751,
|
| 101 |
+
11: 0.0215965,
|
| 102 |
+
12: 0.0174372,
|
| 103 |
+
13: 0.118861,
|
| 104 |
+
14: 0.0366341,
|
| 105 |
+
15: 0.0548712,
|
| 106 |
+
16: 0.0172772,
|
| 107 |
+
17: 0.0191969,
|
| 108 |
+
18: 0.0225564,
|
| 109 |
+
19: 0.0331147,
|
| 110 |
+
20: 0.0279955,
|
| 111 |
+
21: 0.0246361,
|
| 112 |
+
22: 0.0382339,
|
| 113 |
+
23: 0.1294193,
|
| 114 |
+
24: 0.0227164,
|
| 115 |
+
25: 0.0644697,
|
| 116 |
+
26: 0.0281555,
|
| 117 |
+
27: 0.075188,
|
| 118 |
+
28: 0.0364742,
|
| 119 |
+
29: 0.0707087,
|
| 120 |
+
30: 0.0708687,
|
| 121 |
+
31: 0.131019,
|
| 122 |
+
32: 0.2370821,
|
| 123 |
+
33: 0.3066709,
|
| 124 |
+
}
|
| 125 |
+
for n, dc in d.items():
|
| 126 |
+
assert exact[n] == pytest.approx(dc, abs=1e-7)
|
| 127 |
+
|
| 128 |
+
# Check not normalized
|
| 129 |
+
full_energy = 12502
|
| 130 |
+
dnn = nx.laplacian_centrality(KC, normalized=False)
|
| 131 |
+
for n, dc in dnn.items():
|
| 132 |
+
assert exact[n] * full_energy == pytest.approx(dc, abs=1e-3)
|
| 133 |
+
|
| 134 |
+
|
| 135 |
+
def test_laplacian_centrality_K():
|
| 136 |
+
K = nx.krackhardt_kite_graph()
|
| 137 |
+
d = nx.laplacian_centrality(K)
|
| 138 |
+
exact = {
|
| 139 |
+
0: 0.3010753,
|
| 140 |
+
1: 0.3010753,
|
| 141 |
+
2: 0.2258065,
|
| 142 |
+
3: 0.483871,
|
| 143 |
+
4: 0.2258065,
|
| 144 |
+
5: 0.3870968,
|
| 145 |
+
6: 0.3870968,
|
| 146 |
+
7: 0.1935484,
|
| 147 |
+
8: 0.0752688,
|
| 148 |
+
9: 0.0322581,
|
| 149 |
+
}
|
| 150 |
+
for n, dc in d.items():
|
| 151 |
+
assert exact[n] == pytest.approx(dc, abs=1e-7)
|
| 152 |
+
|
| 153 |
+
# Check not normalized
|
| 154 |
+
full_energy = 186
|
| 155 |
+
dnn = nx.laplacian_centrality(K, normalized=False)
|
| 156 |
+
for n, dc in dnn.items():
|
| 157 |
+
assert exact[n] * full_energy == pytest.approx(dc, abs=1e-3)
|
| 158 |
+
|
| 159 |
+
|
| 160 |
+
def test_laplacian_centrality_P3():
|
| 161 |
+
P3 = nx.path_graph(3)
|
| 162 |
+
d = nx.laplacian_centrality(P3)
|
| 163 |
+
exact = {0: 0.6, 1: 1.0, 2: 0.6}
|
| 164 |
+
for n, dc in d.items():
|
| 165 |
+
assert exact[n] == pytest.approx(dc, abs=1e-7)
|
| 166 |
+
|
| 167 |
+
|
| 168 |
+
def test_laplacian_centrality_K5():
|
| 169 |
+
K5 = nx.complete_graph(5)
|
| 170 |
+
d = nx.laplacian_centrality(K5)
|
| 171 |
+
exact = {0: 0.52, 1: 0.52, 2: 0.52, 3: 0.52, 4: 0.52}
|
| 172 |
+
for n, dc in d.items():
|
| 173 |
+
assert exact[n] == pytest.approx(dc, abs=1e-7)
|
| 174 |
+
|
| 175 |
+
|
| 176 |
+
def test_laplacian_centrality_FF():
|
| 177 |
+
FF = nx.florentine_families_graph()
|
| 178 |
+
d = nx.laplacian_centrality(FF)
|
| 179 |
+
exact = {
|
| 180 |
+
"Acciaiuoli": 0.0804598,
|
| 181 |
+
"Medici": 0.4022989,
|
| 182 |
+
"Castellani": 0.1724138,
|
| 183 |
+
"Peruzzi": 0.183908,
|
| 184 |
+
"Strozzi": 0.2528736,
|
| 185 |
+
"Barbadori": 0.137931,
|
| 186 |
+
"Ridolfi": 0.2183908,
|
| 187 |
+
"Tornabuoni": 0.2183908,
|
| 188 |
+
"Albizzi": 0.1954023,
|
| 189 |
+
"Salviati": 0.1149425,
|
| 190 |
+
"Pazzi": 0.0344828,
|
| 191 |
+
"Bischeri": 0.1954023,
|
| 192 |
+
"Guadagni": 0.2298851,
|
| 193 |
+
"Ginori": 0.045977,
|
| 194 |
+
"Lamberteschi": 0.0574713,
|
| 195 |
+
}
|
| 196 |
+
for n, dc in d.items():
|
| 197 |
+
assert exact[n] == pytest.approx(dc, abs=1e-7)
|
| 198 |
+
|
| 199 |
+
|
| 200 |
+
def test_laplacian_centrality_DG():
|
| 201 |
+
DG = nx.DiGraph([(0, 5), (1, 5), (2, 5), (3, 5), (4, 5), (5, 6), (5, 7), (5, 8)])
|
| 202 |
+
d = nx.laplacian_centrality(DG)
|
| 203 |
+
exact = {
|
| 204 |
+
0: 0.2123352,
|
| 205 |
+
5: 0.515391,
|
| 206 |
+
1: 0.2123352,
|
| 207 |
+
2: 0.2123352,
|
| 208 |
+
3: 0.2123352,
|
| 209 |
+
4: 0.2123352,
|
| 210 |
+
6: 0.2952031,
|
| 211 |
+
7: 0.2952031,
|
| 212 |
+
8: 0.2952031,
|
| 213 |
+
}
|
| 214 |
+
for n, dc in d.items():
|
| 215 |
+
assert exact[n] == pytest.approx(dc, abs=1e-7)
|
| 216 |
+
|
| 217 |
+
# Check not normalized
|
| 218 |
+
full_energy = 9.50704
|
| 219 |
+
dnn = nx.laplacian_centrality(DG, normalized=False)
|
| 220 |
+
for n, dc in dnn.items():
|
| 221 |
+
assert exact[n] * full_energy == pytest.approx(dc, abs=1e-4)
|