| { | |
| "model_name": "mito_aff_unet_setup_16", | |
| "model_type": "UNet", | |
| "framework": "torch", | |
| "spatial_dims": 3, | |
| "in_channels": 1, | |
| "out_channels": 3, | |
| "iteration": 400000, | |
| "input_voxel_size": [ | |
| 16, | |
| 16, | |
| 16 | |
| ], | |
| "output_voxel_size": [ | |
| 16, | |
| 16, | |
| 16 | |
| ], | |
| "channels_names": [ | |
| "mito_aff_1", | |
| "mito_aff_2", | |
| "mito_aff_3" | |
| ], | |
| "input_shape": [ | |
| 178, | |
| 178, | |
| 178 | |
| ], | |
| "output_shape": [ | |
| 56, | |
| 56, | |
| 56 | |
| ], | |
| "inference_input_shape": [ | |
| 378, | |
| 378, | |
| 378 | |
| ], | |
| "inference_output_shape": [ | |
| 256, | |
| 256, | |
| 256 | |
| ], | |
| "author": "Marwan Zouinkhi", | |
| "description": "Generated affinities for mitochondria segmentation using a UNet architecture trained on setup 16 with 400k iterations.", | |
| "version": "1.0.0", | |
| "format_version": "1" | |
| } |