v1.0.0

cat_age/README.md

@@ -0,0 +1,207 @@
+---
+base_model: /scratchlocal/fiona.hak/2364375.pbsserver/Mistral-7B-Instruct-v0.3
+library_name: peft
+pipeline_tag: text-generation
+tags:
+- base_model:adapter:/scratchlocal/fiona.hak/2364375.pbsserver/Mistral-7B-Instruct-v0.3
+- lora
+- transformers
+---
+
+# Model Card for Model ID
+
+<!-- Provide a quick summary of what the model is/does. -->
+
+
+
+## Model Details
+
+### Model Description
+
+<!-- Provide a longer summary of what this model is. -->
+
+
+
+- **Developed by:** [More Information Needed]
+- **Funded by [optional]:** [More Information Needed]
+- **Shared by [optional]:** [More Information Needed]
+- **Model type:** [More Information Needed]
+- **Language(s) (NLP):** [More Information Needed]
+- **License:** [More Information Needed]
+- **Finetuned from model [optional]:** [More Information Needed]
+
+### Model Sources [optional]
+
+<!-- Provide the basic links for the model. -->
+
+- **Repository:** [More Information Needed]
+- **Paper [optional]:** [More Information Needed]
+- **Demo [optional]:** [More Information Needed]
+
+## Uses
+
+<!-- Address questions around how the model is intended to be used, including the foreseeable users of the model and those affected by the model. -->
+
+### Direct Use
+
+<!-- This section is for the model use without fine-tuning or plugging into a larger ecosystem/app. -->
+
+[More Information Needed]
+
+### Downstream Use [optional]
+
+<!-- This section is for the model use when fine-tuned for a task, or when plugged into a larger ecosystem/app -->
+
+[More Information Needed]
+
+### Out-of-Scope Use
+
+<!-- This section addresses misuse, malicious use, and uses that the model will not work well for. -->
+
+[More Information Needed]
+
+## Bias, Risks, and Limitations
+
+<!-- This section is meant to convey both technical and sociotechnical limitations. -->
+
+[More Information Needed]
+
+### Recommendations
+
+<!-- This section is meant to convey recommendations with respect to the bias, risk, and technical limitations. -->
+
+Users (both direct and downstream) should be made aware of the risks, biases and limitations of the model. More information needed for further recommendations.
+
+## How to Get Started with the Model
+
+Use the code below to get started with the model.
+
+[More Information Needed]
+
+## Training Details
+
+### Training Data
+
+<!-- This should link to a Dataset Card, perhaps with a short stub of information on what the training data is all about as well as documentation related to data pre-processing or additional filtering. -->
+
+[More Information Needed]
+
+### Training Procedure
+
+<!-- This relates heavily to the Technical Specifications. Content here should link to that section when it is relevant to the training procedure. -->
+
+#### Preprocessing [optional]
+
+[More Information Needed]
+
+
+#### Training Hyperparameters
+
+- **Training regime:** [More Information Needed] <!--fp32, fp16 mixed precision, bf16 mixed precision, bf16 non-mixed precision, fp16 non-mixed precision, fp8 mixed precision -->
+
+#### Speeds, Sizes, Times [optional]
+
+<!-- This section provides information about throughput, start/end time, checkpoint size if relevant, etc. -->
+
+[More Information Needed]
+
+## Evaluation
+
+<!-- This section describes the evaluation protocols and provides the results. -->
+
+### Testing Data, Factors & Metrics
+
+#### Testing Data
+
+<!-- This should link to a Dataset Card if possible. -->
+
+[More Information Needed]
+
+#### Factors
+
+<!-- These are the things the evaluation is disaggregating by, e.g., subpopulations or domains. -->
+
+[More Information Needed]
+
+#### Metrics
+
+<!-- These are the evaluation metrics being used, ideally with a description of why. -->
+
+[More Information Needed]
+
+### Results
+
+[More Information Needed]
+
+#### Summary
+
+
+
+## Model Examination [optional]
+
+<!-- Relevant interpretability work for the model goes here -->
+
+[More Information Needed]
+
+## Environmental Impact
+
+<!-- Total emissions (in grams of CO2eq) and additional considerations, such as electricity usage, go here. Edit the suggested text below accordingly -->
+
+Carbon emissions can be estimated using the [Machine Learning Impact calculator](https://mlco2.github.io/impact#compute) presented in [Lacoste et al. (2019)](https://arxiv.org/abs/1910.09700).
+
+- **Hardware Type:** [More Information Needed]
+- **Hours used:** [More Information Needed]
+- **Cloud Provider:** [More Information Needed]
+- **Compute Region:** [More Information Needed]
+- **Carbon Emitted:** [More Information Needed]
+
+## Technical Specifications [optional]
+
+### Model Architecture and Objective
+
+[More Information Needed]
+
+### Compute Infrastructure
+
+[More Information Needed]
+
+#### Hardware
+
+[More Information Needed]
+
+#### Software
+
+[More Information Needed]
+
+## Citation [optional]
+
+<!-- If there is a paper or blog post introducing the model, the APA and Bibtex information for that should go in this section. -->
+
+**BibTeX:**
+
+[More Information Needed]
+
+**APA:**
+
+[More Information Needed]
+
+## Glossary [optional]
+
+<!-- If relevant, include terms and calculations in this section that can help readers understand the model or model card. -->
+
+[More Information Needed]
+
+## More Information [optional]
+
+[More Information Needed]
+
+## Model Card Authors [optional]
+
+[More Information Needed]
+
+## Model Card Contact
+
+[More Information Needed]
+### Framework versions
+
+- PEFT 0.17.1

cat_age/adapter_config.json

@@ -1,7 +1,7 @@
 {
   "alpha_pattern": {},
   "auto_mapping": null,
-  "base_model_name_or_path": "mistralai/Mistral-7B-Instruct-v0.3",
+  "base_model_name_or_path": "/scratchlocal/fiona.hak/2364375.pbsserver/Mistral-7B-Instruct-v0.3",
   "bias": "none",
   "corda_config": null,
   "eva_config": null,
@@ -13,25 +13,25 @@
   "layers_pattern": null,
   "layers_to_transform": null,
   "loftq_config": {},
-  "lora_alpha": 32,
+  "lora_alpha": 16,
   "lora_bias": false,
-  "lora_dropout": 0.2,
+  "lora_dropout": 0.3,
   "megatron_config": null,
   "megatron_core": "megatron.core",
   "modules_to_save": null,
   "peft_type": "LORA",
   "qalora_group_size": 16,
-  "r": 16,
+  "r": 8,
   "rank_pattern": {},
   "revision": null,
   "target_modules": [
-    "q_proj",
-    "k_proj",
-    "down_proj",
-    "up_proj",
     "gate_proj",
+    "v_proj",
     "o_proj",
-    "v_proj"
+    "up_proj",
+    "down_proj",
+    "k_proj",
+    "q_proj"
   ],
   "target_parameters": null,
   "task_type": "CAUSAL_LM",

cat_age/adapter_model.safetensors

@@ -1,3 +1,3 @@
 version https://git-lfs.github.com/spec/v1
-oid sha256:db3cecf27feb29c0e08771bb050bf2ee41964661a2abee8f31ca58cec07fcb8a
-size 704719768
+oid sha256:137d0e56ff82103b18cf9695f11d83cc640333887800ff55970e28a98f7001dd
+size 620832816

cat_age/chat_template.jinja

@@ -0,0 +1,87 @@
+{%- if messages[0]["role"] == "system" %}
+    {%- set system_message = messages[0]["content"] %}
+    {%- set loop_messages = messages[1:] %}
+{%- else %}
+    {%- set loop_messages = messages %}
+{%- endif %}
+{%- if not tools is defined %}
+    {%- set tools = none %}
+{%- endif %}
+{%- set user_messages = loop_messages | selectattr("role", "equalto", "user") | list %}
+
+{#- This block checks for alternating user/assistant messages, skipping tool calling messages #}
+{%- set ns = namespace() %}
+{%- set ns.index = 0 %}
+{%- for message in loop_messages %}
+    {%- if not (message.role == "tool" or message.role == "tool_results" or (message.tool_calls is defined and message.tool_calls is not none)) %}
+        {%- if (message["role"] == "user") != (ns.index % 2 == 0) %}
+            {{- raise_exception("After the optional system message, conversation roles must alternate user/assistant/user/assistant/...") }}
+        {%- endif %}
+        {%- set ns.index = ns.index + 1 %}
+    {%- endif %}
+{%- endfor %}
+
+{{- bos_token }}
+{%- for message in loop_messages %}
+    {%- if message["role"] == "user" %}
+        {%- if tools is not none and (message == user_messages[-1]) %}
+            {{- "[AVAILABLE_TOOLS] [" }}
+            {%- for tool in tools %}
+                {%- set tool = tool.function %}
+                {{- '{"type": "function", "function": {' }}
+                {%- for key, val in tool.items() if key != "return" %}
+                    {%- if val is string %}
+                        {{- '"' + key + '": "' + val + '"' }}
+                    {%- else %}
+                        {{- '"' + key + '": ' + val|tojson }}
+                    {%- endif %}
+                    {%- if not loop.last %}
+                        {{- ", " }}
+                    {%- endif %}
+                {%- endfor %}
+                {{- "}}" }}
+                {%- if not loop.last %}
+                    {{- ", " }}
+                {%- else %}
+                    {{- "]" }}
+                {%- endif %}
+            {%- endfor %}
+            {{- "[/AVAILABLE_TOOLS]" }}
+            {%- endif %}
+        {%- if loop.last and system_message is defined %}
+            {{- "[INST] " + system_message + "\n\n" + message["content"] + "[/INST]" }}
+        {%- else %}
+            {{- "[INST] " + message["content"] + "[/INST]" }}
+        {%- endif %}
+    {%- elif message.tool_calls is defined and message.tool_calls is not none %}
+        {{- "[TOOL_CALLS] [" }}
+        {%- for tool_call in message.tool_calls %}
+            {%- set out = tool_call.function|tojson %}
+            {{- out[:-1] }}
+            {%- if not tool_call.id is defined or tool_call.id|length != 9 %}
+                {{- raise_exception("Tool call IDs should be alphanumeric strings with length 9!") }}
+            {%- endif %}
+            {{- ', "id": "' + tool_call.id + '"}' }}
+            {%- if not loop.last %}
+                {{- ", " }}
+            {%- else %}
+                {{- "]" + eos_token }}
+            {%- endif %}
+        {%- endfor %}
+    {%- elif message["role"] == "assistant" %}
+        {{- " " + message["content"]|trim + eos_token}}
+    {%- elif message["role"] == "tool_results" or message["role"] == "tool" %}
+        {%- if message.content is defined and message.content.content is defined %}
+            {%- set content = message.content.content %}
+        {%- else %}
+            {%- set content = message.content %}
+        {%- endif %}
+        {{- '[TOOL_RESULTS] {"content": ' + content|string + ", " }}
+        {%- if not message.tool_call_id is defined or message.tool_call_id|length != 9 %}
+            {{- raise_exception("Tool call IDs should be alphanumeric strings with length 9!") }}
+        {%- endif %}
+        {{- '"call_id": "' + message.tool_call_id + '"}[/TOOL_RESULTS]' }}
+    {%- else %}
+        {{- raise_exception("Only user and assistant roles are supported, with the exception of an initial optional system message!") }}
+    {%- endif %}
+{%- endfor %}

cat_biopsy_site/README.md

@@ -0,0 +1,207 @@
+---
+base_model: /scratchlocal/fiona.hak/265068/Mistral-7B-Instruct-v0.3
+library_name: peft
+pipeline_tag: text-generation
+tags:
+- base_model:adapter:/scratchlocal/fiona.hak/265068/Mistral-7B-Instruct-v0.3
+- lora
+- transformers
+---
+
+# Model Card for Model ID
+
+<!-- Provide a quick summary of what the model is/does. -->
+
+
+
+## Model Details
+
+### Model Description
+
+<!-- Provide a longer summary of what this model is. -->
+
+
+
+- **Developed by:** [More Information Needed]
+- **Funded by [optional]:** [More Information Needed]
+- **Shared by [optional]:** [More Information Needed]
+- **Model type:** [More Information Needed]
+- **Language(s) (NLP):** [More Information Needed]
+- **License:** [More Information Needed]
+- **Finetuned from model [optional]:** [More Information Needed]
+
+### Model Sources [optional]
+
+<!-- Provide the basic links for the model. -->
+
+- **Repository:** [More Information Needed]
+- **Paper [optional]:** [More Information Needed]
+- **Demo [optional]:** [More Information Needed]
+
+## Uses
+
+<!-- Address questions around how the model is intended to be used, including the foreseeable users of the model and those affected by the model. -->
+
+### Direct Use
+
+<!-- This section is for the model use without fine-tuning or plugging into a larger ecosystem/app. -->
+
+[More Information Needed]
+
+### Downstream Use [optional]
+
+<!-- This section is for the model use when fine-tuned for a task, or when plugged into a larger ecosystem/app -->
+
+[More Information Needed]
+
+### Out-of-Scope Use
+
+<!-- This section addresses misuse, malicious use, and uses that the model will not work well for. -->
+
+[More Information Needed]
+
+## Bias, Risks, and Limitations
+
+<!-- This section is meant to convey both technical and sociotechnical limitations. -->
+
+[More Information Needed]
+
+### Recommendations
+
+<!-- This section is meant to convey recommendations with respect to the bias, risk, and technical limitations. -->
+
+Users (both direct and downstream) should be made aware of the risks, biases and limitations of the model. More information needed for further recommendations.
+
+## How to Get Started with the Model
+
+Use the code below to get started with the model.
+
+[More Information Needed]
+
+## Training Details
+
+### Training Data
+
+<!-- This should link to a Dataset Card, perhaps with a short stub of information on what the training data is all about as well as documentation related to data pre-processing or additional filtering. -->
+
+[More Information Needed]
+
+### Training Procedure
+
+<!-- This relates heavily to the Technical Specifications. Content here should link to that section when it is relevant to the training procedure. -->
+
+#### Preprocessing [optional]
+
+[More Information Needed]
+
+
+#### Training Hyperparameters
+
+- **Training regime:** [More Information Needed] <!--fp32, fp16 mixed precision, bf16 mixed precision, bf16 non-mixed precision, fp16 non-mixed precision, fp8 mixed precision -->
+
+#### Speeds, Sizes, Times [optional]
+
+<!-- This section provides information about throughput, start/end time, checkpoint size if relevant, etc. -->
+
+[More Information Needed]
+
+## Evaluation
+
+<!-- This section describes the evaluation protocols and provides the results. -->
+
+### Testing Data, Factors & Metrics
+
+#### Testing Data
+
+<!-- This should link to a Dataset Card if possible. -->
+
+[More Information Needed]
+
+#### Factors
+
+<!-- These are the things the evaluation is disaggregating by, e.g., subpopulations or domains. -->
+
+[More Information Needed]
+
+#### Metrics
+
+<!-- These are the evaluation metrics being used, ideally with a description of why. -->
+
+[More Information Needed]
+
+### Results
+
+[More Information Needed]
+
+#### Summary
+
+
+
+## Model Examination [optional]
+
+<!-- Relevant interpretability work for the model goes here -->
+
+[More Information Needed]
+
+## Environmental Impact
+
+<!-- Total emissions (in grams of CO2eq) and additional considerations, such as electricity usage, go here. Edit the suggested text below accordingly -->
+
+Carbon emissions can be estimated using the [Machine Learning Impact calculator](https://mlco2.github.io/impact#compute) presented in [Lacoste et al. (2019)](https://arxiv.org/abs/1910.09700).
+
+- **Hardware Type:** [More Information Needed]
+- **Hours used:** [More Information Needed]
+- **Cloud Provider:** [More Information Needed]
+- **Compute Region:** [More Information Needed]
+- **Carbon Emitted:** [More Information Needed]
+
+## Technical Specifications [optional]
+
+### Model Architecture and Objective
+
+[More Information Needed]
+
+### Compute Infrastructure
+
+[More Information Needed]
+
+#### Hardware
+
+[More Information Needed]
+
+#### Software
+
+[More Information Needed]
+
+## Citation [optional]
+
+<!-- If there is a paper or blog post introducing the model, the APA and Bibtex information for that should go in this section. -->
+
+**BibTeX:**
+
+[More Information Needed]
+
+**APA:**
+
+[More Information Needed]
+
+## Glossary [optional]
+
+<!-- If relevant, include terms and calculations in this section that can help readers understand the model or model card. -->
+
+[More Information Needed]
+
+## More Information [optional]
+
+[More Information Needed]
+
+## Model Card Authors [optional]
+
+[More Information Needed]
+
+## Model Card Contact
+
+[More Information Needed]
+### Framework versions
+
+- PEFT 0.17.1

cat_biopsy_site/adapter_config.json

@@ -1,7 +1,7 @@
 {
   "alpha_pattern": {},
   "auto_mapping": null,
-  "base_model_name_or_path": "mistralai/Mistral-7B-Instruct-v0.3",
+  "base_model_name_or_path": "/scratchlocal/fiona.hak/265068/Mistral-7B-Instruct-v0.3",
   "bias": "none",
   "corda_config": null,
   "eva_config": null,
@@ -25,13 +25,13 @@
   "rank_pattern": {},
   "revision": null,
   "target_modules": [
-    "gate_proj",
-    "up_proj",
-    "k_proj",
-    "o_proj",
     "down_proj",
+    "o_proj",
+    "k_proj",
+    "up_proj",
     "q_proj",
-    "v_proj"
+    "v_proj",
+    "gate_proj"
   ],
   "target_parameters": null,
   "task_type": "CAUSAL_LM",

cat_biopsy_site/adapter_model.safetensors

@@ -1,3 +1,3 @@
 version https://git-lfs.github.com/spec/v1
-oid sha256:6466aa9c8c8c11bff9c02fdfed6073948767e099b9f979dc4ce74aa1f0eee261
+oid sha256:8aa712268f9a0d103fec467ce781b423b5b6e27bfe31b1505cb90978a715bab5
 size 704719768

cat_biopsy_site/chat_template.jinja

@@ -0,0 +1,87 @@
+{%- if messages[0]["role"] == "system" %}
+    {%- set system_message = messages[0]["content"] %}
+    {%- set loop_messages = messages[1:] %}
+{%- else %}
+    {%- set loop_messages = messages %}
+{%- endif %}
+{%- if not tools is defined %}
+    {%- set tools = none %}
+{%- endif %}
+{%- set user_messages = loop_messages | selectattr("role", "equalto", "user") | list %}
+
+{#- This block checks for alternating user/assistant messages, skipping tool calling messages #}
+{%- set ns = namespace() %}
+{%- set ns.index = 0 %}
+{%- for message in loop_messages %}
+    {%- if not (message.role == "tool" or message.role == "tool_results" or (message.tool_calls is defined and message.tool_calls is not none)) %}
+        {%- if (message["role"] == "user") != (ns.index % 2 == 0) %}
+            {{- raise_exception("After the optional system message, conversation roles must alternate user/assistant/user/assistant/...") }}
+        {%- endif %}
+        {%- set ns.index = ns.index + 1 %}
+    {%- endif %}
+{%- endfor %}
+
+{{- bos_token }}
+{%- for message in loop_messages %}
+    {%- if message["role"] == "user" %}
+        {%- if tools is not none and (message == user_messages[-1]) %}
+            {{- "[AVAILABLE_TOOLS] [" }}
+            {%- for tool in tools %}
+                {%- set tool = tool.function %}
+                {{- '{"type": "function", "function": {' }}
+                {%- for key, val in tool.items() if key != "return" %}
+                    {%- if val is string %}
+                        {{- '"' + key + '": "' + val + '"' }}
+                    {%- else %}
+                        {{- '"' + key + '": ' + val|tojson }}
+                    {%- endif %}
+                    {%- if not loop.last %}
+                        {{- ", " }}
+                    {%- endif %}
+                {%- endfor %}
+                {{- "}}" }}
+                {%- if not loop.last %}
+                    {{- ", " }}
+                {%- else %}
+                    {{- "]" }}
+                {%- endif %}
+            {%- endfor %}
+            {{- "[/AVAILABLE_TOOLS]" }}
+            {%- endif %}
+        {%- if loop.last and system_message is defined %}
+            {{- "[INST] " + system_message + "\n\n" + message["content"] + "[/INST]" }}
+        {%- else %}
+            {{- "[INST] " + message["content"] + "[/INST]" }}
+        {%- endif %}
+    {%- elif message.tool_calls is defined and message.tool_calls is not none %}
+        {{- "[TOOL_CALLS] [" }}
+        {%- for tool_call in message.tool_calls %}
+            {%- set out = tool_call.function|tojson %}
+            {{- out[:-1] }}
+            {%- if not tool_call.id is defined or tool_call.id|length != 9 %}
+                {{- raise_exception("Tool call IDs should be alphanumeric strings with length 9!") }}
+            {%- endif %}
+            {{- ', "id": "' + tool_call.id + '"}' }}
+            {%- if not loop.last %}
+                {{- ", " }}
+            {%- else %}
+                {{- "]" + eos_token }}
+            {%- endif %}
+        {%- endfor %}
+    {%- elif message["role"] == "assistant" %}
+        {{- " " + message["content"]|trim + eos_token}}
+    {%- elif message["role"] == "tool_results" or message["role"] == "tool" %}
+        {%- if message.content is defined and message.content.content is defined %}
+            {%- set content = message.content.content %}
+        {%- else %}
+            {%- set content = message.content %}
+        {%- endif %}
+        {{- '[TOOL_RESULTS] {"content": ' + content|string + ", " }}
+        {%- if not message.tool_call_id is defined or message.tool_call_id|length != 9 %}
+            {{- raise_exception("Tool call IDs should be alphanumeric strings with length 9!") }}
+        {%- endif %}
+        {{- '"call_id": "' + message.tool_call_id + '"}[/TOOL_RESULTS]' }}
+    {%- else %}
+        {{- raise_exception("Only user and assistant roles are supported, with the exception of an initial optional system message!") }}
+    {%- endif %}
+{%- endfor %}

cat_biopsy_type/README.md

@@ -0,0 +1,207 @@
+---
+base_model: /scratchlocal/fiona.hak/2365405.pbsserver/Mistral-7B-Instruct-v0.3
+library_name: peft
+pipeline_tag: text-generation
+tags:
+- base_model:adapter:/scratchlocal/fiona.hak/2365405.pbsserver/Mistral-7B-Instruct-v0.3
+- lora
+- transformers
+---
+
+# Model Card for Model ID
+
+<!-- Provide a quick summary of what the model is/does. -->
+
+
+
+## Model Details
+
+### Model Description
+
+<!-- Provide a longer summary of what this model is. -->
+
+
+
+- **Developed by:** [More Information Needed]
+- **Funded by [optional]:** [More Information Needed]
+- **Shared by [optional]:** [More Information Needed]
+- **Model type:** [More Information Needed]
+- **Language(s) (NLP):** [More Information Needed]
+- **License:** [More Information Needed]
+- **Finetuned from model [optional]:** [More Information Needed]
+
+### Model Sources [optional]
+
+<!-- Provide the basic links for the model. -->
+
+- **Repository:** [More Information Needed]
+- **Paper [optional]:** [More Information Needed]
+- **Demo [optional]:** [More Information Needed]
+
+## Uses
+
+<!-- Address questions around how the model is intended to be used, including the foreseeable users of the model and those affected by the model. -->
+
+### Direct Use
+
+<!-- This section is for the model use without fine-tuning or plugging into a larger ecosystem/app. -->
+
+[More Information Needed]
+
+### Downstream Use [optional]
+
+<!-- This section is for the model use when fine-tuned for a task, or when plugged into a larger ecosystem/app -->
+
+[More Information Needed]
+
+### Out-of-Scope Use
+
+<!-- This section addresses misuse, malicious use, and uses that the model will not work well for. -->
+
+[More Information Needed]
+
+## Bias, Risks, and Limitations
+
+<!-- This section is meant to convey both technical and sociotechnical limitations. -->
+
+[More Information Needed]
+
+### Recommendations
+
+<!-- This section is meant to convey recommendations with respect to the bias, risk, and technical limitations. -->
+
+Users (both direct and downstream) should be made aware of the risks, biases and limitations of the model. More information needed for further recommendations.
+
+## How to Get Started with the Model
+
+Use the code below to get started with the model.
+
+[More Information Needed]
+
+## Training Details
+
+### Training Data
+
+<!-- This should link to a Dataset Card, perhaps with a short stub of information on what the training data is all about as well as documentation related to data pre-processing or additional filtering. -->
+
+[More Information Needed]
+
+### Training Procedure
+
+<!-- This relates heavily to the Technical Specifications. Content here should link to that section when it is relevant to the training procedure. -->
+
+#### Preprocessing [optional]
+
+[More Information Needed]
+
+
+#### Training Hyperparameters
+
+- **Training regime:** [More Information Needed] <!--fp32, fp16 mixed precision, bf16 mixed precision, bf16 non-mixed precision, fp16 non-mixed precision, fp8 mixed precision -->
+
+#### Speeds, Sizes, Times [optional]
+
+<!-- This section provides information about throughput, start/end time, checkpoint size if relevant, etc. -->
+
+[More Information Needed]
+
+## Evaluation
+
+<!-- This section describes the evaluation protocols and provides the results. -->
+
+### Testing Data, Factors & Metrics
+
+#### Testing Data
+
+<!-- This should link to a Dataset Card if possible. -->
+
+[More Information Needed]
+
+#### Factors
+
+<!-- These are the things the evaluation is disaggregating by, e.g., subpopulations or domains. -->
+
+[More Information Needed]
+
+#### Metrics
+
+<!-- These are the evaluation metrics being used, ideally with a description of why. -->
+
+[More Information Needed]
+
+### Results
+
+[More Information Needed]
+
+#### Summary
+
+
+
+## Model Examination [optional]
+
+<!-- Relevant interpretability work for the model goes here -->
+
+[More Information Needed]
+
+## Environmental Impact
+
+<!-- Total emissions (in grams of CO2eq) and additional considerations, such as electricity usage, go here. Edit the suggested text below accordingly -->
+
+Carbon emissions can be estimated using the [Machine Learning Impact calculator](https://mlco2.github.io/impact#compute) presented in [Lacoste et al. (2019)](https://arxiv.org/abs/1910.09700).
+
+- **Hardware Type:** [More Information Needed]
+- **Hours used:** [More Information Needed]
+- **Cloud Provider:** [More Information Needed]
+- **Compute Region:** [More Information Needed]
+- **Carbon Emitted:** [More Information Needed]
+
+## Technical Specifications [optional]
+
+### Model Architecture and Objective
+
+[More Information Needed]
+
+### Compute Infrastructure
+
+[More Information Needed]
+
+#### Hardware
+
+[More Information Needed]
+
+#### Software
+
+[More Information Needed]
+
+## Citation [optional]
+
+<!-- If there is a paper or blog post introducing the model, the APA and Bibtex information for that should go in this section. -->
+
+**BibTeX:**
+
+[More Information Needed]
+
+**APA:**
+
+[More Information Needed]
+
+## Glossary [optional]
+
+<!-- If relevant, include terms and calculations in this section that can help readers understand the model or model card. -->
+
+[More Information Needed]
+
+## More Information [optional]
+
+[More Information Needed]
+
+## Model Card Authors [optional]
+
+[More Information Needed]
+
+## Model Card Contact
+
+[More Information Needed]
+### Framework versions
+
+- PEFT 0.17.1

cat_biopsy_type/adapter_config.json

@@ -1,7 +1,7 @@
 {
   "alpha_pattern": {},
   "auto_mapping": null,
-  "base_model_name_or_path": "mistralai/Mistral-7B-Instruct-v0.3",
+  "base_model_name_or_path": "/scratchlocal/fiona.hak/2365405.pbsserver/Mistral-7B-Instruct-v0.3",
   "bias": "none",
   "corda_config": null,
   "eva_config": null,
@@ -15,7 +15,7 @@
   "loftq_config": {},
   "lora_alpha": 32,
   "lora_bias": false,
-  "lora_dropout": 0.2,
+  "lora_dropout": 0.1,
   "megatron_config": null,
   "megatron_core": "megatron.core",
   "modules_to_save": null,
@@ -25,12 +25,9 @@
   "rank_pattern": {},
   "revision": null,
   "target_modules": [
-    "o_proj",
-    "gate_proj",
-    "q_proj",
     "k_proj",
-    "down_proj",
-    "up_proj",
+    "q_proj",
+    "o_proj",
     "v_proj"
   ],
   "target_parameters": null,

cat_biopsy_type/adapter_model.safetensors

@@ -1,3 +1,3 @@
 version https://git-lfs.github.com/spec/v1
-oid sha256:aa69886aa0e00fbdde83081506b0bab4eb88efce80c8085e3059569d72c7dadc
-size 704719768
+oid sha256:72fb756f25434a7f2827e710a7640deab2f98c2fcde2e4bd9b336f91db4d6d8b
+size 54560368

cat_biopsy_type/added_tokens.json

@@ -1,3 +0,0 @@
-{
-  "<pad>": 32768
-}

cat_biopsy_type/chat_template.jinja

@@ -0,0 +1,87 @@
+{%- if messages[0]["role"] == "system" %}
+    {%- set system_message = messages[0]["content"] %}
+    {%- set loop_messages = messages[1:] %}
+{%- else %}
+    {%- set loop_messages = messages %}
+{%- endif %}
+{%- if not tools is defined %}
+    {%- set tools = none %}
+{%- endif %}
+{%- set user_messages = loop_messages | selectattr("role", "equalto", "user") | list %}
+
+{#- This block checks for alternating user/assistant messages, skipping tool calling messages #}
+{%- set ns = namespace() %}
+{%- set ns.index = 0 %}
+{%- for message in loop_messages %}
+    {%- if not (message.role == "tool" or message.role == "tool_results" or (message.tool_calls is defined and message.tool_calls is not none)) %}
+        {%- if (message["role"] == "user") != (ns.index % 2 == 0) %}
+            {{- raise_exception("After the optional system message, conversation roles must alternate user/assistant/user/assistant/...") }}
+        {%- endif %}
+        {%- set ns.index = ns.index + 1 %}
+    {%- endif %}
+{%- endfor %}
+
+{{- bos_token }}
+{%- for message in loop_messages %}
+    {%- if message["role"] == "user" %}
+        {%- if tools is not none and (message == user_messages[-1]) %}
+            {{- "[AVAILABLE_TOOLS] [" }}
+            {%- for tool in tools %}
+                {%- set tool = tool.function %}
+                {{- '{"type": "function", "function": {' }}
+                {%- for key, val in tool.items() if key != "return" %}
+                    {%- if val is string %}
+                        {{- '"' + key + '": "' + val + '"' }}
+                    {%- else %}
+                        {{- '"' + key + '": ' + val|tojson }}
+                    {%- endif %}
+                    {%- if not loop.last %}
+                        {{- ", " }}
+                    {%- endif %}
+                {%- endfor %}
+                {{- "}}" }}
+                {%- if not loop.last %}
+                    {{- ", " }}
+                {%- else %}
+                    {{- "]" }}
+                {%- endif %}
+            {%- endfor %}
+            {{- "[/AVAILABLE_TOOLS]" }}
+            {%- endif %}
+        {%- if loop.last and system_message is defined %}
+            {{- "[INST] " + system_message + "\n\n" + message["content"] + "[/INST]" }}
+        {%- else %}
+            {{- "[INST] " + message["content"] + "[/INST]" }}
+        {%- endif %}
+    {%- elif message.tool_calls is defined and message.tool_calls is not none %}
+        {{- "[TOOL_CALLS] [" }}
+        {%- for tool_call in message.tool_calls %}
+            {%- set out = tool_call.function|tojson %}
+            {{- out[:-1] }}
+            {%- if not tool_call.id is defined or tool_call.id|length != 9 %}
+                {{- raise_exception("Tool call IDs should be alphanumeric strings with length 9!") }}
+            {%- endif %}
+            {{- ', "id": "' + tool_call.id + '"}' }}
+            {%- if not loop.last %}
+                {{- ", " }}
+            {%- else %}
+                {{- "]" + eos_token }}
+            {%- endif %}
+        {%- endfor %}
+    {%- elif message["role"] == "assistant" %}
+        {{- " " + message["content"]|trim + eos_token}}
+    {%- elif message["role"] == "tool_results" or message["role"] == "tool" %}
+        {%- if message.content is defined and message.content.content is defined %}
+            {%- set content = message.content.content %}
+        {%- else %}
+            {%- set content = message.content %}
+        {%- endif %}
+        {{- '[TOOL_RESULTS] {"content": ' + content|string + ", " }}
+        {%- if not message.tool_call_id is defined or message.tool_call_id|length != 9 %}
+            {{- raise_exception("Tool call IDs should be alphanumeric strings with length 9!") }}
+        {%- endif %}
+        {{- '"call_id": "' + message.tool_call_id + '"}[/TOOL_RESULTS]' }}
+    {%- else %}
+        {{- raise_exception("Only user and assistant roles are supported, with the exception of an initial optional system message!") }}
+    {%- endif %}
+{%- endfor %}

cat_biopsy_type/{tokenizer.json → cls_head.pt}

@@ -1,3 +1,3 @@
 version https://git-lfs.github.com/spec/v1
-oid sha256:c9cb3acc357f73729de90a131f83ea8836e45367f6e079df59be48c78469a84f
-size 3672149
+oid sha256:a30e69a6fa8bd754b54d68f9f57e8dd76845f294a0b5b2208dd54e501d598dfa
+size 67193319

cat_biopsy_type/labels.json

@@ -0,0 +1 @@
+{"id2label": {"0": "primary", "1": "metastasis", "2": "blood", "3": "unknown"}, "label2id": {"primary": 0, "metastasis": 1, "blood": 2, "unknown": 3}}

cat_biopsy_type/special_tokens_map.json

@@ -13,7 +13,7 @@
     "rstrip": false,
     "single_word": false
   },
-  "pad_token": "<pad>",
+  "pad_token": "</s>",
   "unk_token": {
     "content": "<unk>",
     "lstrip": false,

cat_biopsy_type/tokenizer_config.json

@@ -6170,14 +6170,6 @@
       "rstrip": false,
       "single_word": false,
       "special": true
-    },
-    "32768": {
-      "content": "<pad>",
-      "lstrip": false,
-      "normalized": false,
-      "rstrip": false,
-      "single_word": false,
-      "special": true
     }
   },
   "bos_token": "<s>",
@@ -6186,7 +6178,7 @@
   "extra_special_tokens": {},
   "legacy": false,
   "model_max_length": 1000000000000000019884624838656,
-  "pad_token": "<pad>",
+  "pad_token": "</s>",
   "sp_model_kwargs": {},
   "spaces_between_special_tokens": false,
   "tokenizer_class": "LlamaTokenizer",

cat_disease/README.md

@@ -0,0 +1,207 @@
+---
+base_model: /scratchlocal/fiona.hak/256445/Mistral-7B-Instruct-v0.3
+library_name: peft
+pipeline_tag: text-generation
+tags:
+- base_model:adapter:/scratchlocal/fiona.hak/256445/Mistral-7B-Instruct-v0.3
+- lora
+- transformers
+---
+
+# Model Card for Model ID
+
+<!-- Provide a quick summary of what the model is/does. -->
+
+
+
+## Model Details
+
+### Model Description
+
+<!-- Provide a longer summary of what this model is. -->
+
+
+
+- **Developed by:** [More Information Needed]
+- **Funded by [optional]:** [More Information Needed]
+- **Shared by [optional]:** [More Information Needed]
+- **Model type:** [More Information Needed]
+- **Language(s) (NLP):** [More Information Needed]
+- **License:** [More Information Needed]
+- **Finetuned from model [optional]:** [More Information Needed]
+
+### Model Sources [optional]
+
+<!-- Provide the basic links for the model. -->
+
+- **Repository:** [More Information Needed]
+- **Paper [optional]:** [More Information Needed]
+- **Demo [optional]:** [More Information Needed]
+
+## Uses
+
+<!-- Address questions around how the model is intended to be used, including the foreseeable users of the model and those affected by the model. -->
+
+### Direct Use
+
+<!-- This section is for the model use without fine-tuning or plugging into a larger ecosystem/app. -->
+
+[More Information Needed]
+
+### Downstream Use [optional]
+
+<!-- This section is for the model use when fine-tuned for a task, or when plugged into a larger ecosystem/app -->
+
+[More Information Needed]
+
+### Out-of-Scope Use
+
+<!-- This section addresses misuse, malicious use, and uses that the model will not work well for. -->
+
+[More Information Needed]
+
+## Bias, Risks, and Limitations
+
+<!-- This section is meant to convey both technical and sociotechnical limitations. -->
+
+[More Information Needed]
+
+### Recommendations
+
+<!-- This section is meant to convey recommendations with respect to the bias, risk, and technical limitations. -->
+
+Users (both direct and downstream) should be made aware of the risks, biases and limitations of the model. More information needed for further recommendations.
+
+## How to Get Started with the Model
+
+Use the code below to get started with the model.
+
+[More Information Needed]
+
+## Training Details
+
+### Training Data
+
+<!-- This should link to a Dataset Card, perhaps with a short stub of information on what the training data is all about as well as documentation related to data pre-processing or additional filtering. -->
+
+[More Information Needed]
+
+### Training Procedure
+
+<!-- This relates heavily to the Technical Specifications. Content here should link to that section when it is relevant to the training procedure. -->
+
+#### Preprocessing [optional]
+
+[More Information Needed]
+
+
+#### Training Hyperparameters
+
+- **Training regime:** [More Information Needed] <!--fp32, fp16 mixed precision, bf16 mixed precision, bf16 non-mixed precision, fp16 non-mixed precision, fp8 mixed precision -->
+
+#### Speeds, Sizes, Times [optional]
+
+<!-- This section provides information about throughput, start/end time, checkpoint size if relevant, etc. -->
+
+[More Information Needed]
+
+## Evaluation
+
+<!-- This section describes the evaluation protocols and provides the results. -->
+
+### Testing Data, Factors & Metrics
+
+#### Testing Data
+
+<!-- This should link to a Dataset Card if possible. -->
+
+[More Information Needed]
+
+#### Factors
+
+<!-- These are the things the evaluation is disaggregating by, e.g., subpopulations or domains. -->
+
+[More Information Needed]
+
+#### Metrics
+
+<!-- These are the evaluation metrics being used, ideally with a description of why. -->
+
+[More Information Needed]
+
+### Results
+
+[More Information Needed]
+
+#### Summary
+
+
+
+## Model Examination [optional]
+
+<!-- Relevant interpretability work for the model goes here -->
+
+[More Information Needed]
+
+## Environmental Impact
+
+<!-- Total emissions (in grams of CO2eq) and additional considerations, such as electricity usage, go here. Edit the suggested text below accordingly -->
+
+Carbon emissions can be estimated using the [Machine Learning Impact calculator](https://mlco2.github.io/impact#compute) presented in [Lacoste et al. (2019)](https://arxiv.org/abs/1910.09700).
+
+- **Hardware Type:** [More Information Needed]
+- **Hours used:** [More Information Needed]
+- **Cloud Provider:** [More Information Needed]
+- **Compute Region:** [More Information Needed]
+- **Carbon Emitted:** [More Information Needed]
+
+## Technical Specifications [optional]
+
+### Model Architecture and Objective
+
+[More Information Needed]
+
+### Compute Infrastructure
+
+[More Information Needed]
+
+#### Hardware
+
+[More Information Needed]
+
+#### Software
+
+[More Information Needed]
+
+## Citation [optional]
+
+<!-- If there is a paper or blog post introducing the model, the APA and Bibtex information for that should go in this section. -->
+
+**BibTeX:**
+
+[More Information Needed]
+
+**APA:**
+
+[More Information Needed]
+
+## Glossary [optional]
+
+<!-- If relevant, include terms and calculations in this section that can help readers understand the model or model card. -->
+
+[More Information Needed]
+
+## More Information [optional]
+
+[More Information Needed]
+
+## Model Card Authors [optional]
+
+[More Information Needed]
+
+## Model Card Contact
+
+[More Information Needed]
+### Framework versions
+
+- PEFT 0.17.1

cat_disease/adapter_config.json

@@ -1,7 +1,7 @@
 {
   "alpha_pattern": {},
   "auto_mapping": null,
-  "base_model_name_or_path": "mistralai/Mistral-7B-Instruct-v0.3",
+  "base_model_name_or_path": "/scratchlocal/fiona.hak/256445/Mistral-7B-Instruct-v0.3",
   "bias": "none",
   "corda_config": null,
   "eva_config": null,
@@ -26,12 +26,12 @@
   "revision": null,
   "target_modules": [
     "down_proj",
-    "v_proj",
     "gate_proj",
-    "k_proj",
-    "o_proj",
     "up_proj",
-    "q_proj"
+    "v_proj",
+    "q_proj",
+    "k_proj",
+    "o_proj"
   ],
   "target_parameters": null,
   "task_type": "CAUSAL_LM",

cat_disease/adapter_model.safetensors

@@ -1,3 +1,3 @@
 version https://git-lfs.github.com/spec/v1
-oid sha256:c1c7455cf9058b0718147216be30b22f3db13c30e992ca8d7d55eef34dcaedb6
+oid sha256:6d2121393cfcc218f01078d2a843c85fbdd69da3a131aeafd479d25a549ef96f
 size 704719768

cat_disease/chat_template.jinja

@@ -0,0 +1,87 @@
+{%- if messages[0]["role"] == "system" %}
+    {%- set system_message = messages[0]["content"] %}
+    {%- set loop_messages = messages[1:] %}
+{%- else %}
+    {%- set loop_messages = messages %}
+{%- endif %}
+{%- if not tools is defined %}
+    {%- set tools = none %}
+{%- endif %}
+{%- set user_messages = loop_messages | selectattr("role", "equalto", "user") | list %}
+
+{#- This block checks for alternating user/assistant messages, skipping tool calling messages #}
+{%- set ns = namespace() %}
+{%- set ns.index = 0 %}
+{%- for message in loop_messages %}
+    {%- if not (message.role == "tool" or message.role == "tool_results" or (message.tool_calls is defined and message.tool_calls is not none)) %}
+        {%- if (message["role"] == "user") != (ns.index % 2 == 0) %}
+            {{- raise_exception("After the optional system message, conversation roles must alternate user/assistant/user/assistant/...") }}
+        {%- endif %}
+        {%- set ns.index = ns.index + 1 %}
+    {%- endif %}
+{%- endfor %}
+
+{{- bos_token }}
+{%- for message in loop_messages %}
+    {%- if message["role"] == "user" %}
+        {%- if tools is not none and (message == user_messages[-1]) %}
+            {{- "[AVAILABLE_TOOLS] [" }}
+            {%- for tool in tools %}
+                {%- set tool = tool.function %}
+                {{- '{"type": "function", "function": {' }}
+                {%- for key, val in tool.items() if key != "return" %}
+                    {%- if val is string %}
+                        {{- '"' + key + '": "' + val + '"' }}
+                    {%- else %}
+                        {{- '"' + key + '": ' + val|tojson }}
+                    {%- endif %}
+                    {%- if not loop.last %}
+                        {{- ", " }}
+                    {%- endif %}
+                {%- endfor %}
+                {{- "}}" }}
+                {%- if not loop.last %}
+                    {{- ", " }}
+                {%- else %}
+                    {{- "]" }}
+                {%- endif %}
+            {%- endfor %}
+            {{- "[/AVAILABLE_TOOLS]" }}
+            {%- endif %}
+        {%- if loop.last and system_message is defined %}
+            {{- "[INST] " + system_message + "\n\n" + message["content"] + "[/INST]" }}
+        {%- else %}
+            {{- "[INST] " + message["content"] + "[/INST]" }}
+        {%- endif %}
+    {%- elif message.tool_calls is defined and message.tool_calls is not none %}
+        {{- "[TOOL_CALLS] [" }}
+        {%- for tool_call in message.tool_calls %}
+            {%- set out = tool_call.function|tojson %}
+            {{- out[:-1] }}
+            {%- if not tool_call.id is defined or tool_call.id|length != 9 %}
+                {{- raise_exception("Tool call IDs should be alphanumeric strings with length 9!") }}
+            {%- endif %}
+            {{- ', "id": "' + tool_call.id + '"}' }}
+            {%- if not loop.last %}
+                {{- ", " }}
+            {%- else %}
+                {{- "]" + eos_token }}
+            {%- endif %}
+        {%- endfor %}
+    {%- elif message["role"] == "assistant" %}
+        {{- " " + message["content"]|trim + eos_token}}
+    {%- elif message["role"] == "tool_results" or message["role"] == "tool" %}
+        {%- if message.content is defined and message.content.content is defined %}
+            {%- set content = message.content.content %}
+        {%- else %}
+            {%- set content = message.content %}
+        {%- endif %}
+        {{- '[TOOL_RESULTS] {"content": ' + content|string + ", " }}
+        {%- if not message.tool_call_id is defined or message.tool_call_id|length != 9 %}
+            {{- raise_exception("Tool call IDs should be alphanumeric strings with length 9!") }}
+        {%- endif %}
+        {{- '"call_id": "' + message.tool_call_id + '"}[/TOOL_RESULTS]' }}
+    {%- else %}
+        {{- raise_exception("Only user and assistant roles are supported, with the exception of an initial optional system message!") }}
+    {%- endif %}
+{%- endfor %}

cat_library_selection/README.md

@@ -0,0 +1,207 @@
+---
+base_model: /scratchlocal/fiona.hak/265059/Mistral-7B-Instruct-v0.3
+library_name: peft
+pipeline_tag: text-generation
+tags:
+- base_model:adapter:/scratchlocal/fiona.hak/265059/Mistral-7B-Instruct-v0.3
+- lora
+- transformers
+---
+
+# Model Card for Model ID
+
+<!-- Provide a quick summary of what the model is/does. -->
+
+
+
+## Model Details
+
+### Model Description
+
+<!-- Provide a longer summary of what this model is. -->
+
+
+
+- **Developed by:** [More Information Needed]
+- **Funded by [optional]:** [More Information Needed]
+- **Shared by [optional]:** [More Information Needed]
+- **Model type:** [More Information Needed]
+- **Language(s) (NLP):** [More Information Needed]
+- **License:** [More Information Needed]
+- **Finetuned from model [optional]:** [More Information Needed]
+
+### Model Sources [optional]
+
+<!-- Provide the basic links for the model. -->
+
+- **Repository:** [More Information Needed]
+- **Paper [optional]:** [More Information Needed]
+- **Demo [optional]:** [More Information Needed]
+
+## Uses
+
+<!-- Address questions around how the model is intended to be used, including the foreseeable users of the model and those affected by the model. -->
+
+### Direct Use
+
+<!-- This section is for the model use without fine-tuning or plugging into a larger ecosystem/app. -->
+
+[More Information Needed]
+
+### Downstream Use [optional]
+
+<!-- This section is for the model use when fine-tuned for a task, or when plugged into a larger ecosystem/app -->
+
+[More Information Needed]
+
+### Out-of-Scope Use
+
+<!-- This section addresses misuse, malicious use, and uses that the model will not work well for. -->
+
+[More Information Needed]
+
+## Bias, Risks, and Limitations
+
+<!-- This section is meant to convey both technical and sociotechnical limitations. -->
+
+[More Information Needed]
+
+### Recommendations
+
+<!-- This section is meant to convey recommendations with respect to the bias, risk, and technical limitations. -->
+
+Users (both direct and downstream) should be made aware of the risks, biases and limitations of the model. More information needed for further recommendations.
+
+## How to Get Started with the Model
+
+Use the code below to get started with the model.
+
+[More Information Needed]
+
+## Training Details
+
+### Training Data
+
+<!-- This should link to a Dataset Card, perhaps with a short stub of information on what the training data is all about as well as documentation related to data pre-processing or additional filtering. -->
+
+[More Information Needed]
+
+### Training Procedure
+
+<!-- This relates heavily to the Technical Specifications. Content here should link to that section when it is relevant to the training procedure. -->
+
+#### Preprocessing [optional]
+
+[More Information Needed]
+
+
+#### Training Hyperparameters
+
+- **Training regime:** [More Information Needed] <!--fp32, fp16 mixed precision, bf16 mixed precision, bf16 non-mixed precision, fp16 non-mixed precision, fp8 mixed precision -->
+
+#### Speeds, Sizes, Times [optional]
+
+<!-- This section provides information about throughput, start/end time, checkpoint size if relevant, etc. -->
+
+[More Information Needed]
+
+## Evaluation
+
+<!-- This section describes the evaluation protocols and provides the results. -->
+
+### Testing Data, Factors & Metrics
+
+#### Testing Data
+
+<!-- This should link to a Dataset Card if possible. -->
+
+[More Information Needed]
+
+#### Factors
+
+<!-- These are the things the evaluation is disaggregating by, e.g., subpopulations or domains. -->
+
+[More Information Needed]
+
+#### Metrics
+
+<!-- These are the evaluation metrics being used, ideally with a description of why. -->
+
+[More Information Needed]
+
+### Results
+
+[More Information Needed]
+
+#### Summary
+
+
+
+## Model Examination [optional]
+
+<!-- Relevant interpretability work for the model goes here -->
+
+[More Information Needed]
+
+## Environmental Impact
+
+<!-- Total emissions (in grams of CO2eq) and additional considerations, such as electricity usage, go here. Edit the suggested text below accordingly -->
+
+Carbon emissions can be estimated using the [Machine Learning Impact calculator](https://mlco2.github.io/impact#compute) presented in [Lacoste et al. (2019)](https://arxiv.org/abs/1910.09700).
+
+- **Hardware Type:** [More Information Needed]
+- **Hours used:** [More Information Needed]
+- **Cloud Provider:** [More Information Needed]
+- **Compute Region:** [More Information Needed]
+- **Carbon Emitted:** [More Information Needed]
+
+## Technical Specifications [optional]
+
+### Model Architecture and Objective
+
+[More Information Needed]
+
+### Compute Infrastructure
+
+[More Information Needed]
+
+#### Hardware
+
+[More Information Needed]
+
+#### Software
+
+[More Information Needed]
+
+## Citation [optional]
+
+<!-- If there is a paper or blog post introducing the model, the APA and Bibtex information for that should go in this section. -->
+
+**BibTeX:**
+
+[More Information Needed]
+
+**APA:**
+
+[More Information Needed]
+
+## Glossary [optional]
+
+<!-- If relevant, include terms and calculations in this section that can help readers understand the model or model card. -->
+
+[More Information Needed]
+
+## More Information [optional]
+
+[More Information Needed]
+
+## Model Card Authors [optional]
+
+[More Information Needed]
+
+## Model Card Contact
+
+[More Information Needed]
+### Framework versions
+
+- PEFT 0.17.1

cat_library_selection/adapter_config.json

@@ -1,7 +1,7 @@
 {
   "alpha_pattern": {},
   "auto_mapping": null,
-  "base_model_name_or_path": "mistralai/Mistral-7B-Instruct-v0.3",
+  "base_model_name_or_path": "/scratchlocal/fiona.hak/265059/Mistral-7B-Instruct-v0.3",
   "bias": "none",
   "corda_config": null,
   "eva_config": null,
@@ -15,7 +15,7 @@
   "loftq_config": {},
   "lora_alpha": 32,
   "lora_bias": false,
-  "lora_dropout": 0.2,
+  "lora_dropout": 0.3,
   "megatron_config": null,
   "megatron_core": "megatron.core",
   "modules_to_save": null,
@@ -25,13 +25,13 @@
   "rank_pattern": {},
   "revision": null,
   "target_modules": [
+    "v_proj",
     "o_proj",
+    "gate_proj",
+    "up_proj",
     "down_proj",
     "q_proj",
-    "k_proj",
-    "gate_proj",
-    "v_proj",
-    "up_proj"
+    "k_proj"
   ],
   "target_parameters": null,
   "task_type": "CAUSAL_LM",

cat_library_selection/adapter_model.safetensors

@@ -1,3 +1,3 @@
 version https://git-lfs.github.com/spec/v1
-oid sha256:4a8262521c7470c6fa11bafc27d6b3c04c8abf9ffd828663501632530180b8cd
+oid sha256:3223db2551596057e8d030259257d97a2b290f2a985368794e523dc30514e8e6
 size 704719768

cat_library_selection/chat_template.jinja

@@ -0,0 +1,87 @@
+{%- if messages[0]["role"] == "system" %}
+    {%- set system_message = messages[0]["content"] %}
+    {%- set loop_messages = messages[1:] %}
+{%- else %}
+    {%- set loop_messages = messages %}
+{%- endif %}
+{%- if not tools is defined %}
+    {%- set tools = none %}
+{%- endif %}
+{%- set user_messages = loop_messages | selectattr("role", "equalto", "user") | list %}
+
+{#- This block checks for alternating user/assistant messages, skipping tool calling messages #}
+{%- set ns = namespace() %}
+{%- set ns.index = 0 %}
+{%- for message in loop_messages %}
+    {%- if not (message.role == "tool" or message.role == "tool_results" or (message.tool_calls is defined and message.tool_calls is not none)) %}
+        {%- if (message["role"] == "user") != (ns.index % 2 == 0) %}
+            {{- raise_exception("After the optional system message, conversation roles must alternate user/assistant/user/assistant/...") }}
+        {%- endif %}
+        {%- set ns.index = ns.index + 1 %}
+    {%- endif %}
+{%- endfor %}
+
+{{- bos_token }}
+{%- for message in loop_messages %}
+    {%- if message["role"] == "user" %}
+        {%- if tools is not none and (message == user_messages[-1]) %}
+            {{- "[AVAILABLE_TOOLS] [" }}
+            {%- for tool in tools %}
+                {%- set tool = tool.function %}
+                {{- '{"type": "function", "function": {' }}
+                {%- for key, val in tool.items() if key != "return" %}
+                    {%- if val is string %}
+                        {{- '"' + key + '": "' + val + '"' }}
+                    {%- else %}
+                        {{- '"' + key + '": ' + val|tojson }}
+                    {%- endif %}
+                    {%- if not loop.last %}
+                        {{- ", " }}
+                    {%- endif %}
+                {%- endfor %}
+                {{- "}}" }}
+                {%- if not loop.last %}
+                    {{- ", " }}
+                {%- else %}
+                    {{- "]" }}
+                {%- endif %}
+            {%- endfor %}
+            {{- "[/AVAILABLE_TOOLS]" }}
+            {%- endif %}
+        {%- if loop.last and system_message is defined %}
+            {{- "[INST] " + system_message + "\n\n" + message["content"] + "[/INST]" }}
+        {%- else %}
+            {{- "[INST] " + message["content"] + "[/INST]" }}
+        {%- endif %}
+    {%- elif message.tool_calls is defined and message.tool_calls is not none %}
+        {{- "[TOOL_CALLS] [" }}
+        {%- for tool_call in message.tool_calls %}
+            {%- set out = tool_call.function|tojson %}
+            {{- out[:-1] }}
+            {%- if not tool_call.id is defined or tool_call.id|length != 9 %}
+                {{- raise_exception("Tool call IDs should be alphanumeric strings with length 9!") }}
+            {%- endif %}
+            {{- ', "id": "' + tool_call.id + '"}' }}
+            {%- if not loop.last %}
+                {{- ", " }}
+            {%- else %}
+                {{- "]" + eos_token }}
+            {%- endif %}
+        {%- endfor %}
+    {%- elif message["role"] == "assistant" %}
+        {{- " " + message["content"]|trim + eos_token}}
+    {%- elif message["role"] == "tool_results" or message["role"] == "tool" %}
+        {%- if message.content is defined and message.content.content is defined %}
+            {%- set content = message.content.content %}
+        {%- else %}
+            {%- set content = message.content %}
+        {%- endif %}
+        {{- '[TOOL_RESULTS] {"content": ' + content|string + ", " }}
+        {%- if not message.tool_call_id is defined or message.tool_call_id|length != 9 %}
+            {{- raise_exception("Tool call IDs should be alphanumeric strings with length 9!") }}
+        {%- endif %}
+        {{- '"call_id": "' + message.tool_call_id + '"}[/TOOL_RESULTS]' }}
+    {%- else %}
+        {{- raise_exception("Only user and assistant roles are supported, with the exception of an initial optional system message!") }}
+    {%- endif %}
+{%- endfor %}

cat_organ/README.md

@@ -0,0 +1,207 @@
+---
+base_model: /scratchlocal/fiona.hak/2365197.pbsserver/Mistral-7B-Instruct-v0.3
+library_name: peft
+pipeline_tag: text-generation
+tags:
+- base_model:adapter:/scratchlocal/fiona.hak/2365197.pbsserver/Mistral-7B-Instruct-v0.3
+- lora
+- transformers
+---
+
+# Model Card for Model ID
+
+<!-- Provide a quick summary of what the model is/does. -->
+
+
+
+## Model Details
+
+### Model Description
+
+<!-- Provide a longer summary of what this model is. -->
+
+
+
+- **Developed by:** [More Information Needed]
+- **Funded by [optional]:** [More Information Needed]
+- **Shared by [optional]:** [More Information Needed]
+- **Model type:** [More Information Needed]
+- **Language(s) (NLP):** [More Information Needed]
+- **License:** [More Information Needed]
+- **Finetuned from model [optional]:** [More Information Needed]
+
+### Model Sources [optional]
+
+<!-- Provide the basic links for the model. -->
+
+- **Repository:** [More Information Needed]
+- **Paper [optional]:** [More Information Needed]
+- **Demo [optional]:** [More Information Needed]
+
+## Uses
+
+<!-- Address questions around how the model is intended to be used, including the foreseeable users of the model and those affected by the model. -->
+
+### Direct Use
+
+<!-- This section is for the model use without fine-tuning or plugging into a larger ecosystem/app. -->
+
+[More Information Needed]
+
+### Downstream Use [optional]
+
+<!-- This section is for the model use when fine-tuned for a task, or when plugged into a larger ecosystem/app -->
+
+[More Information Needed]
+
+### Out-of-Scope Use
+
+<!-- This section addresses misuse, malicious use, and uses that the model will not work well for. -->
+
+[More Information Needed]
+
+## Bias, Risks, and Limitations
+
+<!-- This section is meant to convey both technical and sociotechnical limitations. -->
+
+[More Information Needed]
+
+### Recommendations
+
+<!-- This section is meant to convey recommendations with respect to the bias, risk, and technical limitations. -->
+
+Users (both direct and downstream) should be made aware of the risks, biases and limitations of the model. More information needed for further recommendations.
+
+## How to Get Started with the Model
+
+Use the code below to get started with the model.
+
+[More Information Needed]
+
+## Training Details
+
+### Training Data
+
+<!-- This should link to a Dataset Card, perhaps with a short stub of information on what the training data is all about as well as documentation related to data pre-processing or additional filtering. -->
+
+[More Information Needed]
+
+### Training Procedure
+
+<!-- This relates heavily to the Technical Specifications. Content here should link to that section when it is relevant to the training procedure. -->
+
+#### Preprocessing [optional]
+
+[More Information Needed]
+
+
+#### Training Hyperparameters
+
+- **Training regime:** [More Information Needed] <!--fp32, fp16 mixed precision, bf16 mixed precision, bf16 non-mixed precision, fp16 non-mixed precision, fp8 mixed precision -->
+
+#### Speeds, Sizes, Times [optional]
+
+<!-- This section provides information about throughput, start/end time, checkpoint size if relevant, etc. -->
+
+[More Information Needed]
+
+## Evaluation
+
+<!-- This section describes the evaluation protocols and provides the results. -->
+
+### Testing Data, Factors & Metrics
+
+#### Testing Data
+
+<!-- This should link to a Dataset Card if possible. -->
+
+[More Information Needed]
+
+#### Factors
+
+<!-- These are the things the evaluation is disaggregating by, e.g., subpopulations or domains. -->
+
+[More Information Needed]
+
+#### Metrics
+
+<!-- These are the evaluation metrics being used, ideally with a description of why. -->
+
+[More Information Needed]
+
+### Results
+
+[More Information Needed]
+
+#### Summary
+
+
+
+## Model Examination [optional]
+
+<!-- Relevant interpretability work for the model goes here -->
+
+[More Information Needed]
+
+## Environmental Impact
+
+<!-- Total emissions (in grams of CO2eq) and additional considerations, such as electricity usage, go here. Edit the suggested text below accordingly -->
+
+Carbon emissions can be estimated using the [Machine Learning Impact calculator](https://mlco2.github.io/impact#compute) presented in [Lacoste et al. (2019)](https://arxiv.org/abs/1910.09700).
+
+- **Hardware Type:** [More Information Needed]
+- **Hours used:** [More Information Needed]
+- **Cloud Provider:** [More Information Needed]
+- **Compute Region:** [More Information Needed]
+- **Carbon Emitted:** [More Information Needed]
+
+## Technical Specifications [optional]
+
+### Model Architecture and Objective
+
+[More Information Needed]
+
+### Compute Infrastructure
+
+[More Information Needed]
+
+#### Hardware
+
+[More Information Needed]
+
+#### Software
+
+[More Information Needed]
+
+## Citation [optional]
+
+<!-- If there is a paper or blog post introducing the model, the APA and Bibtex information for that should go in this section. -->
+
+**BibTeX:**
+
+[More Information Needed]
+
+**APA:**
+
+[More Information Needed]
+
+## Glossary [optional]
+
+<!-- If relevant, include terms and calculations in this section that can help readers understand the model or model card. -->
+
+[More Information Needed]
+
+## More Information [optional]
+
+[More Information Needed]
+
+## Model Card Authors [optional]
+
+[More Information Needed]
+
+## Model Card Contact
+
+[More Information Needed]
+### Framework versions
+
+- PEFT 0.17.1

cat_organ/adapter_config.json

@@ -1,7 +1,7 @@
 {
   "alpha_pattern": {},
   "auto_mapping": null,
-  "base_model_name_or_path": "mistralai/Mistral-7B-Instruct-v0.3",
+  "base_model_name_or_path": "/scratchlocal/fiona.hak/2365197.pbsserver/Mistral-7B-Instruct-v0.3",
   "bias": "none",
   "corda_config": null,
   "eva_config": null,
@@ -13,25 +13,25 @@
   "layers_pattern": null,
   "layers_to_transform": null,
   "loftq_config": {},
-  "lora_alpha": 32,
+  "lora_alpha": 16,
   "lora_bias": false,
-  "lora_dropout": 0.2,
+  "lora_dropout": 0.3,
   "megatron_config": null,
   "megatron_core": "megatron.core",
   "modules_to_save": null,
   "peft_type": "LORA",
   "qalora_group_size": 16,
-  "r": 16,
+  "r": 8,
   "rank_pattern": {},
   "revision": null,
   "target_modules": [
-    "v_proj",
-    "up_proj",
-    "gate_proj",
+    "down_proj",
+    "o_proj",
     "k_proj",
     "q_proj",
-    "down_proj",
-    "o_proj"
+    "v_proj",
+    "up_proj",
+    "gate_proj"
   ],
   "target_parameters": null,
   "task_type": "CAUSAL_LM",

cat_organ/adapter_model.safetensors

@@ -1,3 +1,3 @@
 version https://git-lfs.github.com/spec/v1
-oid sha256:7834942b3e81c53979500f3c0fe86cc6723be423a57a2f9d79a161f73053fb5d
-size 704719768
+oid sha256:c4338dc4679ea59edf3339c73210d049852e85177169f99fef203163d1ef91d0
+size 620832816

cat_organ/chat_template.jinja

@@ -0,0 +1,87 @@
+{%- if messages[0]["role"] == "system" %}
+    {%- set system_message = messages[0]["content"] %}
+    {%- set loop_messages = messages[1:] %}
+{%- else %}
+    {%- set loop_messages = messages %}
+{%- endif %}
+{%- if not tools is defined %}
+    {%- set tools = none %}
+{%- endif %}
+{%- set user_messages = loop_messages | selectattr("role", "equalto", "user") | list %}
+
+{#- This block checks for alternating user/assistant messages, skipping tool calling messages #}
+{%- set ns = namespace() %}
+{%- set ns.index = 0 %}
+{%- for message in loop_messages %}
+    {%- if not (message.role == "tool" or message.role == "tool_results" or (message.tool_calls is defined and message.tool_calls is not none)) %}
+        {%- if (message["role"] == "user") != (ns.index % 2 == 0) %}
+            {{- raise_exception("After the optional system message, conversation roles must alternate user/assistant/user/assistant/...") }}
+        {%- endif %}
+        {%- set ns.index = ns.index + 1 %}
+    {%- endif %}
+{%- endfor %}
+
+{{- bos_token }}
+{%- for message in loop_messages %}
+    {%- if message["role"] == "user" %}
+        {%- if tools is not none and (message == user_messages[-1]) %}
+            {{- "[AVAILABLE_TOOLS] [" }}
+            {%- for tool in tools %}
+                {%- set tool = tool.function %}
+                {{- '{"type": "function", "function": {' }}
+                {%- for key, val in tool.items() if key != "return" %}
+                    {%- if val is string %}
+                        {{- '"' + key + '": "' + val + '"' }}
+                    {%- else %}
+                        {{- '"' + key + '": ' + val|tojson }}
+                    {%- endif %}
+                    {%- if not loop.last %}
+                        {{- ", " }}
+                    {%- endif %}
+                {%- endfor %}
+                {{- "}}" }}
+                {%- if not loop.last %}
+                    {{- ", " }}
+                {%- else %}
+                    {{- "]" }}
+                {%- endif %}
+            {%- endfor %}
+            {{- "[/AVAILABLE_TOOLS]" }}
+            {%- endif %}
+        {%- if loop.last and system_message is defined %}
+            {{- "[INST] " + system_message + "\n\n" + message["content"] + "[/INST]" }}
+        {%- else %}
+            {{- "[INST] " + message["content"] + "[/INST]" }}
+        {%- endif %}
+    {%- elif message.tool_calls is defined and message.tool_calls is not none %}
+        {{- "[TOOL_CALLS] [" }}
+        {%- for tool_call in message.tool_calls %}
+            {%- set out = tool_call.function|tojson %}
+            {{- out[:-1] }}
+            {%- if not tool_call.id is defined or tool_call.id|length != 9 %}
+                {{- raise_exception("Tool call IDs should be alphanumeric strings with length 9!") }}
+            {%- endif %}
+            {{- ', "id": "' + tool_call.id + '"}' }}
+            {%- if not loop.last %}
+                {{- ", " }}
+            {%- else %}
+                {{- "]" + eos_token }}
+            {%- endif %}
+        {%- endfor %}
+    {%- elif message["role"] == "assistant" %}
+        {{- " " + message["content"]|trim + eos_token}}
+    {%- elif message["role"] == "tool_results" or message["role"] == "tool" %}
+        {%- if message.content is defined and message.content.content is defined %}
+            {%- set content = message.content.content %}
+        {%- else %}
+            {%- set content = message.content %}
+        {%- endif %}
+        {{- '[TOOL_RESULTS] {"content": ' + content|string + ", " }}
+        {%- if not message.tool_call_id is defined or message.tool_call_id|length != 9 %}
+            {{- raise_exception("Tool call IDs should be alphanumeric strings with length 9!") }}
+        {%- endif %}
+        {{- '"call_id": "' + message.tool_call_id + '"}[/TOOL_RESULTS]' }}
+    {%- else %}
+        {{- raise_exception("Only user and assistant roles are supported, with the exception of an initial optional system message!") }}
+    {%- endif %}
+{%- endfor %}

cat_sex/README.md

@@ -0,0 +1,207 @@
+---
+base_model: /scratchlocal/fiona.hak/2365368.pbsserver/Mistral-7B-Instruct-v0.3
+library_name: peft
+pipeline_tag: text-generation
+tags:
+- base_model:adapter:/scratchlocal/fiona.hak/2365368.pbsserver/Mistral-7B-Instruct-v0.3
+- lora
+- transformers
+---
+
+# Model Card for Model ID
+
+<!-- Provide a quick summary of what the model is/does. -->
+
+
+
+## Model Details
+
+### Model Description
+
+<!-- Provide a longer summary of what this model is. -->
+
+
+
+- **Developed by:** [More Information Needed]
+- **Funded by [optional]:** [More Information Needed]
+- **Shared by [optional]:** [More Information Needed]
+- **Model type:** [More Information Needed]
+- **Language(s) (NLP):** [More Information Needed]
+- **License:** [More Information Needed]
+- **Finetuned from model [optional]:** [More Information Needed]
+
+### Model Sources [optional]
+
+<!-- Provide the basic links for the model. -->
+
+- **Repository:** [More Information Needed]
+- **Paper [optional]:** [More Information Needed]
+- **Demo [optional]:** [More Information Needed]
+
+## Uses
+
+<!-- Address questions around how the model is intended to be used, including the foreseeable users of the model and those affected by the model. -->
+
+### Direct Use
+
+<!-- This section is for the model use without fine-tuning or plugging into a larger ecosystem/app. -->
+
+[More Information Needed]
+
+### Downstream Use [optional]
+
+<!-- This section is for the model use when fine-tuned for a task, or when plugged into a larger ecosystem/app -->
+
+[More Information Needed]
+
+### Out-of-Scope Use
+
+<!-- This section addresses misuse, malicious use, and uses that the model will not work well for. -->
+
+[More Information Needed]
+
+## Bias, Risks, and Limitations
+
+<!-- This section is meant to convey both technical and sociotechnical limitations. -->
+
+[More Information Needed]
+
+### Recommendations
+
+<!-- This section is meant to convey recommendations with respect to the bias, risk, and technical limitations. -->
+
+Users (both direct and downstream) should be made aware of the risks, biases and limitations of the model. More information needed for further recommendations.
+
+## How to Get Started with the Model
+
+Use the code below to get started with the model.
+
+[More Information Needed]
+
+## Training Details
+
+### Training Data
+
+<!-- This should link to a Dataset Card, perhaps with a short stub of information on what the training data is all about as well as documentation related to data pre-processing or additional filtering. -->
+
+[More Information Needed]
+
+### Training Procedure
+
+<!-- This relates heavily to the Technical Specifications. Content here should link to that section when it is relevant to the training procedure. -->
+
+#### Preprocessing [optional]
+
+[More Information Needed]
+
+
+#### Training Hyperparameters
+
+- **Training regime:** [More Information Needed] <!--fp32, fp16 mixed precision, bf16 mixed precision, bf16 non-mixed precision, fp16 non-mixed precision, fp8 mixed precision -->
+
+#### Speeds, Sizes, Times [optional]
+
+<!-- This section provides information about throughput, start/end time, checkpoint size if relevant, etc. -->
+
+[More Information Needed]
+
+## Evaluation
+
+<!-- This section describes the evaluation protocols and provides the results. -->
+
+### Testing Data, Factors & Metrics
+
+#### Testing Data
+
+<!-- This should link to a Dataset Card if possible. -->
+
+[More Information Needed]
+
+#### Factors
+
+<!-- These are the things the evaluation is disaggregating by, e.g., subpopulations or domains. -->
+
+[More Information Needed]
+
+#### Metrics
+
+<!-- These are the evaluation metrics being used, ideally with a description of why. -->
+
+[More Information Needed]
+
+### Results
+
+[More Information Needed]
+
+#### Summary
+
+
+
+## Model Examination [optional]
+
+<!-- Relevant interpretability work for the model goes here -->
+
+[More Information Needed]
+
+## Environmental Impact
+
+<!-- Total emissions (in grams of CO2eq) and additional considerations, such as electricity usage, go here. Edit the suggested text below accordingly -->
+
+Carbon emissions can be estimated using the [Machine Learning Impact calculator](https://mlco2.github.io/impact#compute) presented in [Lacoste et al. (2019)](https://arxiv.org/abs/1910.09700).
+
+- **Hardware Type:** [More Information Needed]
+- **Hours used:** [More Information Needed]
+- **Cloud Provider:** [More Information Needed]
+- **Compute Region:** [More Information Needed]
+- **Carbon Emitted:** [More Information Needed]
+
+## Technical Specifications [optional]
+
+### Model Architecture and Objective
+
+[More Information Needed]
+
+### Compute Infrastructure
+
+[More Information Needed]
+
+#### Hardware
+
+[More Information Needed]
+
+#### Software
+
+[More Information Needed]
+
+## Citation [optional]
+
+<!-- If there is a paper or blog post introducing the model, the APA and Bibtex information for that should go in this section. -->
+
+**BibTeX:**
+
+[More Information Needed]
+
+**APA:**
+
+[More Information Needed]
+
+## Glossary [optional]
+
+<!-- If relevant, include terms and calculations in this section that can help readers understand the model or model card. -->
+
+[More Information Needed]
+
+## More Information [optional]
+
+[More Information Needed]
+
+## Model Card Authors [optional]
+
+[More Information Needed]
+
+## Model Card Contact
+
+[More Information Needed]
+### Framework versions
+
+- PEFT 0.17.1

cat_sex/adapter_config.json

@@ -1,7 +1,7 @@
 {
   "alpha_pattern": {},
   "auto_mapping": null,
-  "base_model_name_or_path": "mistralai/Mistral-7B-Instruct-v0.3",
+  "base_model_name_or_path": "/scratchlocal/fiona.hak/2365368.pbsserver/Mistral-7B-Instruct-v0.3",
   "bias": "none",
   "corda_config": null,
   "eva_config": null,
@@ -26,12 +26,12 @@
   "revision": null,
   "target_modules": [
     "q_proj",
+    "v_proj",
+    "down_proj",
+    "o_proj",
     "up_proj",
     "gate_proj",
-    "k_proj",
-    "down_proj",
-    "v_proj",
-    "o_proj"
+    "k_proj"
   ],
   "target_parameters": null,
   "task_type": "CAUSAL_LM",

cat_sex/adapter_model.safetensors

@@ -1,3 +1,3 @@
 version https://git-lfs.github.com/spec/v1
-oid sha256:605f6567c0c351f682cee0c720c29f42fbd065cd9768bbd892dcfb1ddccfdbaa
+oid sha256:1f883969412062e1576b96d3f0e9a788bfc65021af9df20ee033559762736ecb
 size 704719768

cat_sex/chat_template.jinja

@@ -0,0 +1,87 @@
+{%- if messages[0]["role"] == "system" %}
+    {%- set system_message = messages[0]["content"] %}
+    {%- set loop_messages = messages[1:] %}
+{%- else %}
+    {%- set loop_messages = messages %}
+{%- endif %}
+{%- if not tools is defined %}
+    {%- set tools = none %}
+{%- endif %}
+{%- set user_messages = loop_messages | selectattr("role", "equalto", "user") | list %}
+
+{#- This block checks for alternating user/assistant messages, skipping tool calling messages #}
+{%- set ns = namespace() %}
+{%- set ns.index = 0 %}
+{%- for message in loop_messages %}
+    {%- if not (message.role == "tool" or message.role == "tool_results" or (message.tool_calls is defined and message.tool_calls is not none)) %}
+        {%- if (message["role"] == "user") != (ns.index % 2 == 0) %}
+            {{- raise_exception("After the optional system message, conversation roles must alternate user/assistant/user/assistant/...") }}
+        {%- endif %}
+        {%- set ns.index = ns.index + 1 %}
+    {%- endif %}
+{%- endfor %}
+
+{{- bos_token }}
+{%- for message in loop_messages %}
+    {%- if message["role"] == "user" %}
+        {%- if tools is not none and (message == user_messages[-1]) %}
+            {{- "[AVAILABLE_TOOLS] [" }}
+            {%- for tool in tools %}
+                {%- set tool = tool.function %}
+                {{- '{"type": "function", "function": {' }}
+                {%- for key, val in tool.items() if key != "return" %}
+                    {%- if val is string %}
+                        {{- '"' + key + '": "' + val + '"' }}
+                    {%- else %}
+                        {{- '"' + key + '": ' + val|tojson }}
+                    {%- endif %}
+                    {%- if not loop.last %}
+                        {{- ", " }}
+                    {%- endif %}
+                {%- endfor %}
+                {{- "}}" }}
+                {%- if not loop.last %}
+                    {{- ", " }}
+                {%- else %}
+                    {{- "]" }}
+                {%- endif %}
+            {%- endfor %}
+            {{- "[/AVAILABLE_TOOLS]" }}
+            {%- endif %}
+        {%- if loop.last and system_message is defined %}
+            {{- "[INST] " + system_message + "\n\n" + message["content"] + "[/INST]" }}
+        {%- else %}
+            {{- "[INST] " + message["content"] + "[/INST]" }}
+        {%- endif %}
+    {%- elif message.tool_calls is defined and message.tool_calls is not none %}
+        {{- "[TOOL_CALLS] [" }}
+        {%- for tool_call in message.tool_calls %}
+            {%- set out = tool_call.function|tojson %}
+            {{- out[:-1] }}
+            {%- if not tool_call.id is defined or tool_call.id|length != 9 %}
+                {{- raise_exception("Tool call IDs should be alphanumeric strings with length 9!") }}
+            {%- endif %}
+            {{- ', "id": "' + tool_call.id + '"}' }}
+            {%- if not loop.last %}
+                {{- ", " }}
+            {%- else %}
+                {{- "]" + eos_token }}
+            {%- endif %}
+        {%- endfor %}
+    {%- elif message["role"] == "assistant" %}
+        {{- " " + message["content"]|trim + eos_token}}
+    {%- elif message["role"] == "tool_results" or message["role"] == "tool" %}
+        {%- if message.content is defined and message.content.content is defined %}
+            {%- set content = message.content.content %}
+        {%- else %}
+            {%- set content = message.content %}
+        {%- endif %}
+        {{- '[TOOL_RESULTS] {"content": ' + content|string + ", " }}
+        {%- if not message.tool_call_id is defined or message.tool_call_id|length != 9 %}
+            {{- raise_exception("Tool call IDs should be alphanumeric strings with length 9!") }}
+        {%- endif %}
+        {{- '"call_id": "' + message.tool_call_id + '"}[/TOOL_RESULTS]' }}
+    {%- else %}
+        {{- raise_exception("Only user and assistant roles are supported, with the exception of an initial optional system message!") }}
+    {%- endif %}
+{%- endfor %}