Update README.md

README.md

@@ -1,3 +1,21 @@
----
-license: afl-3.0
----
+---
+license: afl-3.0
+---
+Here only provides a simple, useful template. For more details, please visit the [HuDiff GitHub repository](https://github.com/TencentAI4S/HuDiff).
+## HuDiff-Ab Humanization
+There are two ways to humanize an antibody, either by using a complex fasta file containing antigen-antibody sequences or by providing individual heavy and light chain sequences.
+```
+python antibody_scripts/sample_for_anti_cdr.py 
+--ckpt checkpoints/antibody/hudiffab.pt
+--anti_complex_fasta data/fasta_file/7k9i.fasta
+```
+Keep in mind that you need to replace 7k9i.fasta. 
+## HuDiff-Nb Humanization
+Using the fasta file of the nanobody, our model can humanize it. If you require a higher degree of humanization, consider increasing the batch size or the number of samplings.
+```
+python nanobody_scripts/sample_for_nano_cdr.py 
+--ckpt checkpoints/nanobody/hudiffnb.pt 
+--nano_complex_fasta data/fasta_file/7x2l.fasta 
+--model finetune_vh 
+--inpaint_sample True
+```