Image Feature Extraction
timm
Safetensors
pathology
histopathology
her2
breast-cancer
h-and-e
vision-transformer
multiple-instance-learning
Instructions to use cloudkites/her2-reader with libraries, inference providers, notebooks, and local apps. Follow these links to get started.
- Libraries
- timm
How to use cloudkites/her2-reader with timm:
import timm model = timm.create_model("hf-hub:cloudkites/her2-reader", pretrained=True) - Notebooks
- Google Colab
- Kaggle
Download data/paper/book-data/her2_dot.dat from cloudkites/her2-reader: direct link, hf CLI and curl.
- Browser
- Download file 5.54 kB
-
https://huggingface.co/cloudkites/her2-reader/resolve/main/data/paper/book-data/her2_dot.dat
- Command line
-
hf download hf://cloudkites/her2-reader/data/paper/book-data/her2_dot.dat
-
curl -L -o her2_dot.dat https://huggingface.co/cloudkites/her2-reader/resolve/main/data/paper/book-data/her2_dot.dat
5.54 kB
| y key group yy yy_sd yy_lo yy_hi tt tt_sd tt_lo tt_hi ty ty_sd ty_lo ty_hi yt yt_sd yt_lo yt_hi | |
| 2 vits16-random-init ctl 0.5900 0.0040 0.5873 0.5947 0.5080 0.0124 0.4989 0.5221 0.4375 0.0317 0.4041 0.4673 0.4849 0.0020 0.4835 0.4873 | |
| 3 dinov2-vits14 ctl 0.7192 0.0203 0.6988 0.7394 0.5011 0.0226 0.4878 0.5272 0.5889 0.0203 0.5659 0.6044 0.5764 0.0115 0.5631 0.5834 | |
| 4 resnet50-imagenet ctl 0.7009 0.0427 0.6559 0.7408 0.5517 0.0279 0.5315 0.5835 0.6296 0.0149 0.6124 0.6388 0.5606 0.0069 0.5539 0.5677 | |
| 6.6 ssl-vits16-step5k s16 0.7264 0.0064 0.7191 0.7310 0.5697 0.0129 0.5549 0.5778 0.6764 0.0184 0.6556 0.6903 0.5228 0.0041 0.5187 0.5269 | |
| 7.6 ssl-vits16-step20k s16 0.7382 0.0126 0.7285 0.7525 0.5675 0.0106 0.5602 0.5797 0.6174 0.0430 0.5685 0.6490 0.5451 0.0010 0.5444 0.5463 | |
| 8.6 ssl-vits16-step35k s16 0.8039 0.0106 0.7919 0.8120 0.5992 0.0082 0.5898 0.6047 0.5613 0.0149 0.5464 0.5763 0.5306 0.0038 0.5262 0.5333 | |
| 9.6 ssl-vits16-step40k s16 0.7919 0.0193 0.7696 0.8035 0.6199 0.0090 0.6102 0.6278 0.5651 0.0174 0.5469 0.5814 0.5144 0.0034 0.5107 0.5173 | |
| 10.6 ssl-vits16-step45k s16 0.7601 0.0245 0.7400 0.7873 0.5887 0.0192 0.5666 0.6017 0.5873 0.0660 0.5455 0.6633 0.5253 0.0061 0.5190 0.5312 | |
| 11.6 ssl-vits16-step50k s16 0.7808 0.0174 0.7611 0.7939 0.6085 0.0042 0.6036 0.6110 0.5499 0.0167 0.5307 0.5603 0.5281 0.0060 0.5233 0.5348 | |
| 12.6 ssl-vits16-step55k s16 0.7880 0.0285 0.7561 0.8109 0.5888 0.0031 0.5854 0.5915 0.6004 0.0520 0.5576 0.6583 0.5322 0.0064 0.5260 0.5387 | |
| 13.6 ssl-vits16-step60k s16 0.7775 0.0090 0.7681 0.7860 0.5958 0.0062 0.5887 0.5999 0.5922 0.0314 0.5560 0.6112 0.5318 0.0034 0.5296 0.5358 | |
| 14.6 ssl-vits16-step65k s16 0.7588 0.0154 0.7486 0.7765 0.6211 0.0165 0.6104 0.6402 0.5530 0.0541 0.4957 0.6031 0.5177 0.0018 0.5157 0.5192 | |
| 15.6 ssl-vits16-final s16 0.7675 0.0267 0.7376 0.7892 0.5891 0.0128 0.5754 0.6009 0.5841 0.0385 0.5417 0.6167 0.5205 0.0029 0.5182 0.5238 | |
| 18.2 ssl-vitb16-step10k b16 0.7575 0.0358 0.7255 0.7961 0.5877 0.0045 0.5839 0.5927 0.5724 0.0202 0.5527 0.5930 0.5307 0.0105 0.5201 0.5411 | |
| 19.2 ssl-vitb16-step35k b16 0.8290 0.0099 0.8217 0.8403 0.5819 0.0184 0.5690 0.6030 0.6380 0.0233 0.6212 0.6646 0.5455 0.0017 0.5444 0.5474 | |
| 20.2 ssl-vitb16-step40k b16 0.7934 0.0135 0.7781 0.8035 0.6074 0.0161 0.5909 0.6231 0.6651 0.0377 0.6307 0.7053 0.5472 0.0057 0.5427 0.5536 | |
| 22.8 distill-midnight-20k dst 0.7714 0.0195 0.7494 0.7869 0.5899 0.0170 0.5704 0.6005 0.7010 0.0206 0.6799 0.7211 0.5454 0.0081 0.5373 0.5535 | |
| 23.8 distill-hoptimus-20k dst 0.8064 0.0183 0.7861 0.8215 0.6688 0.0101 0.6591 0.6793 0.7157 0.0151 0.7056 0.7330 0.5733 0.0040 0.5704 0.5778 | |
| 24.8 distill-midnight-5k-from-random dst 0.7616 0.0241 0.7352 0.7823 0.5474 0.0242 0.5200 0.5659 0.6205 0.0347 0.5811 0.6464 0.5288 0.0026 0.5260 0.5311 | |
| 25.8 distill-midnight-5k-from-vits16-step50k dst 0.7718 0.0161 0.7532 0.7811 0.5688 0.0093 0.5582 0.5761 0.7244 0.0175 0.7071 0.7422 0.5576 0.0113 0.5448 0.5659 | |
| 26.8 distill-midnight-5k-from-vits16-final dst 0.7923 0.0214 0.7697 0.8122 0.5878 0.0072 0.5804 0.5949 0.6512 0.0293 0.6178 0.6725 0.5526 0.0017 0.5516 0.5546 | |
| 27.8 distill-hoptimus-5k-from-random dst 0.7922 0.0088 0.7849 0.8019 0.5922 0.0143 0.5810 0.6083 0.7387 0.0281 0.7071 0.7607 0.5632 0.0016 0.5618 0.5649 | |
| 28.8 distill-hoptimus-5k-from-vits16-step50k dst 0.8143 0.0083 0.8089 0.8238 0.6361 0.0038 0.6322 0.6398 0.7393 0.0173 0.7215 0.7562 0.6215 0.0038 0.6186 0.6258 | |
| 29.8 distill-hoptimus-5k-from-vits16-final dst 0.8196 0.0197 0.7974 0.8350 0.6228 0.0229 0.5982 0.6435 0.7443 0.0219 0.7197 0.7616 0.5930 0.0059 0.5864 0.5976 | |
| 32.4 distill-hoptimus-vitb16-5k-from-vitb16-step40k dstb 0.8177 0.0098 0.8110 0.8290 0.6332 0.0157 0.6211 0.6509 0.7757 0.0098 0.7644 0.7826 0.6406 0.0080 0.6328 0.6488 | |
| 33.4 distill-hoptimus-vitb16-5k-from-vitb16-step45k dstb 0.7765 0.0094 0.7681 0.7867 0.6329 0.0143 0.6170 0.6444 0.7623 0.0040 0.7578 0.7654 0.6215 0.0069 0.6153 0.6289 | |
| 34.4 distill-hoptimus-vitb16-5k-from-vitb16-step50k dstb 0.8032 0.0397 0.7664 0.8453 0.6148 0.0022 0.6130 0.6173 0.7547 0.0075 0.7470 0.7619 0.6136 0.0012 0.6127 0.6149 | |
| 37 hibou-b ref 0.7794 0.0119 0.7684 0.7920 0.6442 0.0161 0.6262 0.6569 0.7172 0.0299 0.6932 0.7506 0.6309 0.0105 0.6187 0.6374 | |
| 38 phikon ref 0.8756 0.0047 0.8706 0.8800 0.6690 0.0085 0.6613 0.6780 0.8128 0.0191 0.7914 0.8278 0.6606 0.0003 0.6602 0.6609 | |
| 39 virchow2 ref 0.8673 0.0086 0.8576 0.8742 0.6336 0.0146 0.6247 0.6505 0.7425 0.0349 0.7089 0.7785 0.6541 0.0058 0.6494 0.6605 | |
| 40 midnight12k ref 0.8064 0.0091 0.7960 0.8129 0.5970 0.0028 0.5944 0.6001 0.7163 0.0086 0.7107 0.7262 0.6240 0.0039 0.6195 0.6267 | |
| 41 midnight12k-cls-mean ref 0.8114 0.0112 0.7993 0.8213 0.6105 0.0084 0.6016 0.6184 0.7337 0.0209 0.7170 0.7571 0.6376 0.0039 0.6334 0.6411 | |
| 42 midnight12k-1.0um ref 0.8013 0.0060 0.7953 0.8073 0.5858 0.0127 0.5723 0.5976 0.7243 0.0269 0.6932 0.7400 0.6087 0.0054 0.6054 0.6150 | |
| 43 hoptimus0-imagenetnorm ref 0.8978 0.0104 0.8862 0.9063 0.6685 0.0232 0.6442 0.6905 0.7977 0.0172 0.7786 0.8121 0.6562 0.0013 0.6549 0.6575 | |
| 44 hoptimus0-imagenetnorm-repeat ref 0.8954 0.0143 0.8793 0.9066 0.6683 0.0145 0.6515 0.6771 0.7871 0.0310 0.7534 0.8144 0.6562 0.0052 0.6520 0.6621 | |
| 45 hoptimus0-cardnorm ref 0.8868 0.0072 0.8792 0.8935 0.6755 0.0162 0.6632 0.6938 0.8100 0.0116 0.7986 0.8218 0.6531 0.0078 0.6445 0.6596 | |
| 46 hoptimus0-cls-mean ref 0.8925 0.0157 0.8747 0.9043 0.6723 0.0179 0.6553 0.6909 0.8028 0.0253 0.7736 0.8194 0.6630 0.0057 0.6566 0.6674 | |
| 47 hoptimus0-1.0um ref 0.9088 0.0066 0.9038 0.9163 0.6591 0.0153 0.6415 0.6696 0.8033 0.0109 0.7925 0.8143 0.6419 0.0071 0.6348 0.6491 | |