her2-reader / data /paper /paper-data /paper_macros.tex
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HER2 reader: ViT-S/16 encoders at every stage, the deployed reader, per-slide predictions and paper data (part 2)
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% Generated by docs/paper/paper_data.py from ../training/data/m5_macros.tex
\providecommand\pset[2]{\expandafter\def\csname pp:#1\endcsname{#2}}
\pset{updated}{9 October 2026}
\pset{r1-yy}{0.850}
\pset{r1-yy-spread}{0.003}
\pset{r1-yy-gap}{$-$0.022}
\pset{r1-tt}{0.688}
\pset{r1-tt-spread}{0.002}
\pset{r1-tt-gap}{+0.009}
\pset{r1-ty}{0.795}
\pset{r1-ty-spread}{0.006}
\pset{r1-ty-gap}{$-$0.016}
\pset{r1-yt}{0.642}
\pset{r1-yt-spread}{0.001}
\pset{r1-yt-gap}{$-$0.020}
\pset{rank-yy}{3}
\pset{rank-tt}{1}
\pset{rank-ty}{1}
\pset{rank-yt}{3}
\pset{rank-n}{7}
\pset{pb-tcga-rank}{1}
\pset{pb-tcga-ours}{0.689}
\pset{pb-yale-rank}{3}
\pset{pb-yale-ours}{0.897}
\pset{pb-n}{7}
\pset{t4-her2low-ours}{0.649}
\pset{t4-her2low-rank}{4}
\pset{t4-her2low-best}{0.741}
\pset{t4-her2low-min}{0.61}
\pset{t4-her2low-max}{0.74}
\pset{t4-her2low-phikon}{0.741}
\pset{t4-her2low-hopt}{0.692}
\pset{t4-her2low-hibou}{0.678}
\pset{t4-her2low-midnight}{0.626}
\pset{t4-her2low-rn50}{0.615}
\pset{t4-her2low-dinov2s}{0.613}
\pset{t4-fish-ours}{0.544}
\pset{t4-fish-rank}{2}
\pset{t4-fish-best}{0.546}
\pset{t4-fish-min}{0.47}
\pset{t4-fish-max}{0.55}
\pset{t4-fish-phikon}{0.475}
\pset{t4-fish-hopt}{0.546}
\pset{t4-fish-hibou}{0.485}
\pset{t4-fish-midnight}{0.538}
\pset{t4-fish-rn50}{0.468}
\pset{t4-fish-dinov2s}{0.471}
\pset{t4-fishx-ours}{0.682}
\pset{t4-fishx-rank}{2}
\pset{t4-fishx-best}{0.706}
\pset{t4-fishx-min}{0.57}
\pset{t4-fishx-max}{0.71}
\pset{t4-fishx-phikon}{0.619}
\pset{t4-fishx-hopt}{0.706}
\pset{t4-fishx-hibou}{0.672}
\pset{t4-fishx-midnight}{0.650}
\pset{t4-fishx-rn50}{0.575}
\pset{t4-fishx-dinov2s}{0.632}
\pset{t4-fisho-ours}{0.669}
\pset{t4-fisho-rank}{2}
\pset{t4-fisho-best}{0.690}
\pset{t4-fisho-min}{0.44}
\pset{t4-fisho-max}{0.69}
\pset{t4-fisho-phikon}{0.654}
\pset{t4-fisho-hopt}{0.690}
\pset{t4-fisho-hibou}{0.572}
\pset{t4-fisho-midnight}{0.644}
\pset{t4-fisho-rn50}{0.445}
\pset{t4-fisho-dinov2s}{0.469}
\pset{t4-lowx-ours}{0.456}
\pset{t4-lowx-rank}{6}
\pset{t4-lowx-best}{0.542}
\pset{t4-lowx-min}{0.44}
\pset{t4-lowx-max}{0.54}
\pset{t4-lowx-phikon}{0.479}
\pset{t4-lowx-hopt}{0.500}
\pset{t4-lowx-hibou}{0.542}
\pset{t4-lowx-midnight}{0.494}
\pset{t4-lowx-rn50}{0.462}
\pset{t4-lowx-dinov2s}{0.441}
\pset{t4-lowo-ours}{0.560}
\pset{t4-lowo-rank}{4}
\pset{t4-lowo-best}{0.570}
\pset{t4-lowo-min}{0.54}
\pset{t4-lowo-max}{0.57}
\pset{t4-lowo-phikon}{0.551}
\pset{t4-lowo-hopt}{0.569}
\pset{t4-lowo-hibou}{0.553}
\pset{t4-lowo-midnight}{0.570}
\pset{t4-lowo-rn50}{0.541}
\pset{t4-lowo-dinov2s}{0.565}
\pset{t4-fish-n}{143}
\pset{t4-fish-pos}{44}
\pset{t4-fish-agree}{131}
\pset{t4-fish-both}{143}
\pset{t4-n}{7}
\pset{t4s1-her2low}{0.662}
\pset{t4s1-her2low-d}{-0.020}
\pset{t4s2-her2low}{0.683}
\pset{t4j1-her2low}{0.661}
\pset{t4j1-her2low-d}{-0.022}
\pset{t4j2-her2low}{0.649}
\pset{t4j2-her2low-d}{-0.034}
\pset{t4w75-her2low}{0.651}
\pset{t4w75-her2low-d}{-0.031}
\pset{t4w50-her2low}{0.665}
\pset{t4w50-her2low-d}{-0.018}
\pset{t4s100-her2low}{0.649}
\pset{t4s100-her2low-d}{-0.034}
\pset{t4j100-her2low}{0.629}
\pset{t4j100-her2low-d}{-0.054}
\pset{rd-thr}{0.27}
\pset{rd-n-yale}{192}
\pset{rd-pos-yale}{93}
\pset{rd-n-tcga}{490}
\pset{rd-yale-sens}{0.72}
\pset{rd-yale-sens-ci}{0.62--0.80}
\pset{rd-yale-spec}{0.79}
\pset{rd-yale-spec-ci}{0.70--0.86}
\pset{rd-yale-ppv}{0.76}
\pset{rd-yale-ppv-ci}{0.66--0.84}
\pset{rd-yale-npv}{0.75}
\pset{rd-yale-npv-ci}{0.66--0.82}
\pset{rd-yale05-sens}{0.14}
\pset{rd-yale05-sens-ci}{0.08--0.22}
\pset{rd-yale05-spec}{0.97}
\pset{rd-yale05-spec-ci}{0.91--0.99}
\pset{rd-yale05-ppv}{0.81}
\pset{rd-yale05-ppv-ci}{0.57--0.93}
\pset{rd-yale05-npv}{0.55}
\pset{rd-yale05-npv-ci}{0.47--0.62}
\pset{rd-tcga-sens}{0.58}
\pset{rd-tcga-sens-ci}{0.50--0.65}
\pset{rd-tcga-spec}{0.75}
\pset{rd-tcga-spec-ci}{0.70--0.79}
\pset{rd-tcga-ppv}{0.51}
\pset{rd-tcga-ppv-ci}{0.44--0.59}
\pset{rd-tcga-npv}{0.79}
\pset{rd-tcga-npv-ci}{0.74--0.83}
\pset{rd-tcga05-sens}{0.23}
\pset{rd-tcga05-sens-ci}{0.17--0.30}
\pset{rd-tcga05-spec}{0.93}
\pset{rd-tcga05-spec-ci}{0.90--0.95}
\pset{rd-tcga05-ppv}{0.61}
\pset{rd-tcga05-ppv-ci}{0.48--0.72}
\pset{rd-tcga05-npv}{0.72}
\pset{rd-tcga05-npv-ci}{0.68--0.76}
\pset{rd-auc}{0.815}
\pset{rd-auc-ci}{0.75--0.88}