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Data preparation for clankerDiffusion.
One streaming pass over FineWeb-edu (+ a Wikipedia slice for world knowledge,
+ synthetic tool-use and RAG/retrieval examples that teach the special tags):
1. first N docs -> train the byte-level BPE tokenizer (from scratch)
2. remainder -> tokenize and pack into a flat uint16 .bin until token budget
Outputs (under --out-dir, default ./data):
tokenizer.json meta.json
train.bin (flat uint16 tokens)
meta.json ({n_tokens, seq_len, vocab_size})
Designed so EVERY training environment (local / Modal / Kaggle / TPU) can
regenerate the corpus itself with fast HF egress -- no 2 GB file transfer needed.
Use --scale to grow the corpus (e.g. --scale 4 for a multi-billion-token run).
"""
import os, json, random, argparse
import numpy as np
from datasets import load_dataset
import tokenizer as tokmod
from tokenizer import YKTokenizer, SPECIAL
from build_rag import FACTS, SYSTEM as RAG_SYSTEM
random.seed(1234)
np.random.seed(1234)
OUT = os.path.dirname(os.path.abspath(__file__))
DATADIR = os.path.join(OUT, "data")
os.makedirs(DATADIR, exist_ok=True)
SEQ_LEN = 1024
TOK_TRAIN_DOCS = 80_000
TOK_BUDGET_FINEWEB = 900_000_000 # scaled by --scale
TOK_BUDGET_WIKI = 300_000_000 # scaled by --scale
TOK_BUDGET_TOOL = 250_000_000 # scaled by --scale
TOK_BUDGET_RAG = 150_000_000 # scaled by --scale
# --------------------------------------------------------------------------
# 1) Tokenizer training
# --------------------------------------------------------------------------
def train_tokenizer(out_dir=DATADIR):
print("[prep] streaming FineWeb-edu to collect tokenizer training docs ...")
ds = load_dataset("HuggingFaceFW/fineweb-edu", "sample-10BT",
streaming=True, split="train")
texts = []
for i, ex in enumerate(ds):
texts.append(ex["text"])
if i + 1 >= TOK_TRAIN_DOCS:
break
print(f"[prep] collected {len(texts)} docs for tokenizer")
tok = YKTokenizer().train(
iter(texts), vocab_size=32768,
save_path=os.path.join(out_dir, "tokenizer.json"))
print(f"[prep] tokenizer trained: vocab={tok.vocab_size}")
return tok
# --------------------------------------------------------------------------
# 2) Synthetic tool-use conversations (tag format == agent.py)
# --------------------------------------------------------------------------
CALC_TEMPLATES = [
"What is {a} {op} {b}?", "Compute {a} {op} {b} for me.",
"Calculate the result of {a} {op} {b}.",
"If I start at {a} and apply {op} {b}, what do I get?",
]
OPS = {"+": "plus", "-": "minus", "*": "times", "/": "divided by"}
PY_SNIPPETS = [
"print(sum(range(1, {n}+1)))",
"import math\nprint(round(math.sqrt({n}), 4))",
"print(sorted([{a}, {b}, {c}]))",
"print({n} ** 2 + {n})",
"s='clanker'; print(s[::-1])",
]
FILE_Q = [
"Read the file {path} and tell me what is on the first line.",
"What is inside {path}?", "List the files in {dir}.",
]
SYSTEM = ("You are clanker, a helpful assistant that can THINK, USE TOOLS, and "
"USE MEMORY. You may reason in <think>...</think> at any point, "
"interleaved with actions. Wrap tool calls in "
"<tool name=\"...\">arguments</tool>. Available tools: calc(expr), "
"python(code), read_file(path), list_dir(path), retrieve(query). After "
"a tool result appears in <result>...</result>, continue and give the "
"final answer. If <context>...</context> is provided, use it. You keep "
"facts in a secondary memory: <mem_write>KEY<mem_kv>VALUE</mem_kv> to "
"store, <mem_read>KEY</mem_read> to recall (result returns inside "
"<mem_kv>...</mem_kv>), and <mem_evict>KEY</mem_evict> to forget.")
def gen_synthetic(n=60000):
out = []
for _ in range(n):
kind = random.random()
if kind < 0.45:
a = random.randint(2, 999); b = random.randint(2, 999)
op = random.choice(["+", "-", "*", "/"])
b = max(2, b if op != "/" else random.randint(2, 50))
if op == "/":
a = a * b
ans = eval(f"{a}{op}{b}")
q = random.choice(CALC_TEMPLATES).format(a=a, b=b, op=OPS[op])
tool = f'<tool name="calc">{a} {op} {b}</tool>'
result = str(ans)
think = f"<think>The user wants {a} {OPS[op]} {b}. I'll use the calculator.</think>"
elif kind < 0.8:
n_ = random.randint(3, 200); a = random.randint(1, 50); b = random.randint(1, 50); c = random.randint(1, 50)
code = random.choice(PY_SNIPPETS).format(n=n_, a=a, b=b, c=c)
q = f"Run this tiny Python snippet and report the output:\n{code}"
tool = f'<tool name="python">{code}</tool>'
try:
import io, contextlib
buf = io.StringIO()
with contextlib.redirect_stdout(buf):
exec(code, {"__builtins__": __builtins__}, {})
result = buf.getvalue().strip()
except Exception as e:
result = f"error: {e}"
think = "<think>I can execute this with the python tool.</think>"
else:
path = random.choice(["notes.txt", "data/log.csv", "README.md", "config.json"])
q = random.choice(FILE_Q).format(path=path, dir=random.choice(["src", "data", "."]))
if "List" in q or "list" in q:
tool = f'<tool name="list_dir">{path}</tool>'
result = f"{path}/\n file_a.txt\n file_b.csv"
else:
tool = f'<tool name="read_file">{path}</tool>'
result = f"line 1: hello from {path}"
think = "<think>I should read the file with the read_file tool.</think>"
conv = (f"<bos><system>{SYSTEM}</system>"
f"<user>{q}</user>"
f"<assistant>{think}{tool}<result>{result}</result>"
f"Based on the tool result, the answer is {result}.</assistant><eos>")
out.append(conv)
return out
# --------------------------------------------------------------------------
# 2b) Interleaved-thinking + learned-memory examples.
# Teaches the model to reason step-by-step *between* tool calls and to
# persist/recall facts via <mem_write>/<mem_read>/<mem_evict> against the
# side store (see memstore.py). Thinking is INTERLEAVED: think, act,
# think, answer -- not one big block at the start.
# --------------------------------------------------------------------------
MEM_FACTS = [
("project:clanker", "clanker is a hybrid AR/diffusion LM with learned memory."),
("user:name", "The user's name is Ada."),
("user:likes", "The user likes concise answers and tool use."),
("fact:pi", "pi is approximately 3.14159."),
("fact:capitals", "The capital of France is Paris; of Japan is Tokyo."),
("pref:format", "Prefer <think> reasoning before tool calls."),
]
MEM_KEYS = [k for k, _ in MEM_FACTS]
def gen_memory(n=30000):
out = []
for _ in range(n):
key, val = random.choice(MEM_FACTS)
mode = random.random()
if mode < 0.4:
# write then read back (persistence demo)
conv = (f"<bos><system>{SYSTEM}</system>"
f"<user>Remember that {val}</user>"
f"<assistant><think>I should store this in secondary memory "
f"so I can recall it later.</think>"
f"<mem_write>{key}<mem_kv>{val}</mem_kv>"
f"<think>Stored. Now I can read it back to confirm.</think>"
f"<mem_read>{key}</mem_read><mem_kv>{val}</mem_kv>"
f"Got it -- I'll remember {val}</assistant><eos>")
elif mode < 0.75:
# read an existing fact, interleaved with reasoning
conv = (f"<bos><system>{SYSTEM}</system>"
f"<user>What do you know about {key}?</user>"
f"<assistant><think>Let me pull this from secondary memory.</think>"
f"<mem_read>{key}</mem_read><mem_kv>{val}</mem_kv>"
f"<think>That matches what I stored.</think> "
f"Based on memory: {val}</assistant><eos>")
else:
# evict
conv = (f"<bos><system>{SYSTEM}</system>"
f"<user>Forget {key}.</user>"
f"<assistant><think>I'll remove it from secondary memory.</think>"
f"<mem_evict>{key}</mem_evict>Done, I forgot {key}.</assistant><eos>")
out.append(conv)
return out
# Multi-step reasoning with INTERLEAVED think/act/think/answer.
# Each entry: (question, calc_expr, final_answer)
REASON_QA = [
("A train travels 60 km/h for 2 hours, then 90 km/h for 1 hour. Total distance?",
"60*2 + 90*1", "210 km"),
("If I buy 3 items at $4.50 each and a $2 tax, total cost?",
"3*4.50 + 2", "$15.50"),
("A rectangle is 8 by 5. Area and perimeter?",
"8*5", "area 40, perimeter 26"),
("Compound 5% on $1000 for 2 years?",
"1000*1.05**2", "$1102.50"),
("Mix 2L at 10C with 3L at 40C, final temp?",
"(2*10+3*40)/5", "28C"),
]
def gen_interleaved(n=30000):
out = []
for _ in range(n):
q, expr, ans = random.choice(REASON_QA)
try:
res = str(eval(expr))
except Exception:
res = "?"
conv = (f"<bos><system>{SYSTEM}</system>"
f"<user>{q}</user>"
f"<assistant><think>Break it into parts.</think>"
f"<tool name=\"calc\">{expr}</tool>"
f"<result>{res}</result>"
f"<think>That gives the first part; combine with the rest.</think> "
f"The answer is {ans}.</assistant><eos>")
out.append(conv)
return out
# --------------------------------------------------------------------------
# 3) RAG / retrieval examples (teach <tool name="retrieve"> and <context>)
# --------------------------------------------------------------------------
def gen_rag(n=40000):
out = []
for _ in range(n):
topic, doc, q, a = random.choice(FACTS)
mode = random.random()
if mode < 0.5:
conv = (f"<bos><system>{RAG_SYSTEM}</system><user>{q}</user>"
f"<assistant><tool name=\"retrieve\">{q}</tool>"
f"<result>{doc}</result>{a}</assistant><eos>")
elif mode < 0.85:
conv = (f"<bos><system>{RAG_SYSTEM}</system><user>{q}</user>"
f"<assistant><think>Let me check the provided context.</think>"
f"<context>{doc}</context>{a}</assistant><eos>")
else:
conv = (f"<bos><system>{RAG_SYSTEM}</system><user>{q}</user>"
f"<assistant><think>{doc}</think>{a}</assistant><eos>")
out.append(conv)
return out
# --------------------------------------------------------------------------
# 4) Glaive function-calling (best-effort)
# --------------------------------------------------------------------------
def gen_glaive(max_examples=20000):
out = []
try:
ds = load_dataset("glaiveai/glaive-function-calling-v2",
streaming=True, split="train")
except Exception as e:
print(f"[prep] Glaive unavailable ({e}); skipping.")
return out
for i, ex in enumerate(ds):
if i >= max_examples:
break
try:
conv = ex["conversations"]
parts = ["<bos>"]
for m in conv:
role = m.get("role") or m.get("from")
val = m.get("value") or m.get("content") or ""
if role in ("system", "system_prompt"):
parts.append(f"<system>{val}</system>")
elif role in ("human", "user"):
parts.append(f"<user>{val}</user>")
elif role in ("gpt", "assistant", "function"):
val = val.replace("{\"name\":", "<tool name=\"").replace("\"function_call\"", "")
parts.append(f"<assistant>{val}</assistant>")
elif role == "tool":
parts.append(f"<result>{val}</result>")
parts.append("<eos>")
out.append("".join(parts))
except Exception:
continue
print(f"[prep] Glaive converted: {len(out)} examples")
return out
# --------------------------------------------------------------------------
# 5) Packing
# --------------------------------------------------------------------------
def pack(tok, texts, bin_path, budget, seq_len):
n = 0
buf = []
with open(bin_path, "ab") as f:
for text in texts:
ids = tok.encode(text)
if not ids:
continue
buf.extend(ids)
while len(buf) >= seq_len:
chunk = np.array(buf[:seq_len], dtype=np.uint16)
f.write(chunk.tobytes())
buf = buf[seq_len:]
n += seq_len
if n >= budget:
return n
if buf:
chunk = np.array(buf[:seq_len], dtype=np.uint16)
if len(chunk) == seq_len:
with open(bin_path, "ab") as f:
f.write(chunk.tobytes())
n += seq_len
return n
def main():
ap = argparse.ArgumentParser()
ap.add_argument("--out-dir", default=DATADIR)
ap.add_argument("--scale", type=float, default=1.0,
help="multiply token budgets (e.g. 4 -> ~4x more data)")
ap.add_argument("--no-wiki", action="store_true")
ap.add_argument("--no-rag", action="store_true")
ap.add_argument("--no-glaive", action="store_true")
ap.add_argument("--no-mem", action="store_true")
args = ap.parse_args()
out_dir = args.out_dir
os.makedirs(out_dir, exist_ok=True)
scale = args.scale
bw_fw = int(TOK_BUDGET_FINEWEB * scale)
bw_wiki = int(TOK_BUDGET_WIKI * scale)
bw_tool = int(TOK_BUDGET_TOOL * scale)
bw_rag = int(TOK_BUDGET_RAG * scale)
tok_path = os.path.join(out_dir, "tokenizer.json")
if os.path.exists(tok_path):
print("[prep] loading existing tokenizer")
tok = YKTokenizer.load(tok_path)
else:
# try to reuse the canonical tokenizer from HF (keeps all runs compatible)
try:
print("[prep] no local tokenizer; downloading canonical one from HF ...")
from huggingface_hub import hf_hub_download
tok_path = hf_hub_download(
repo_id="coderofpears/clankerDiffusion-base",
filename="data/tokenizer.json",
repo_type="model",
local_dir=out_dir,
token=os.environ.get("HF_TOKEN"))
tok = YKTokenizer.load(tok_path)
except Exception as e:
print(f"[prep] HF tokenizer download failed ({e}); training a new one.")
tok = train_tokenizer(out_dir)
bin_path = os.path.join(out_dir, "train.bin")
if os.path.exists(bin_path):
os.remove(bin_path)
# --- fineweb-edu ---
print(f"[prep] FineWeb-edu (budget {bw_fw:,}) ...")
ds = load_dataset("HuggingFaceFW/fineweb-edu", "sample-10BT",
streaming=True, split="train")
gen = iter(ds)
for _ in range(TOK_TRAIN_DOCS):
next(gen)
def fineweb_iter():
for ex in gen:
yield ex["text"]
n = pack(tok, fineweb_iter(), bin_path, bw_fw, SEQ_LEN)
print(f"[prep] fineweb packed: {n:,} tokens")
# --- wikipedia (world knowledge) ---
if not args.no_wiki:
print(f"[prep] Wikipedia (budget {bw_wiki:,}) ...")
try:
wds = load_dataset("wikipedia", "20220301.en",
streaming=True, split="train")
def wiki_iter():
for ex in wds:
yield ex["text"]
nw = pack(tok, wiki_iter(), bin_path, bw_wiki, SEQ_LEN)
print(f"[prep] wikipedia packed: {nw:,} tokens")
n += nw
except Exception as e:
print(f"[prep] wikipedia skipped: {e}")
# --- synthetic tool data (incl. interleaved reasoning) ---
synth = gen_synthetic(int(60_000 * scale) + 60000)
inter = gen_interleaved(int(30_000 * scale) + 30000)
n2 = pack(tok, synth + inter, bin_path, bw_tool, SEQ_LEN)
print(f"[prep] synthetic tool packed: {n2:,} tokens")
# --- learned-memory data ---
if not args.no_mem:
mem = gen_memory(int(30_000 * scale) + 30000)
nm = pack(tok, mem, bin_path, int(bw_tool * 0.6), SEQ_LEN)
print(f"[prep] memory packed: {nm:,} tokens")
n2 += nm
# --- RAG / retrieval data ---
if not args.no_rag:
rag = gen_rag(int(40_000 * scale) + 40000)
nr = pack(tok, rag, bin_path, bw_rag, SEQ_LEN)
print(f"[prep] RAG packed: {nr:,} tokens")
n2 += nr
# --- glaive ---
if not args.no_glaive:
gl = gen_glaive(20000)
n3 = pack(tok, gl, bin_path, bw_tool, SEQ_LEN) if gl else 0
else:
n3 = 0
total = n + n2 + n3
meta = {"n_tokens": int(total), "seq_len": SEQ_LEN,
"vocab_size": tok.vocab_size, "path": "train.bin", "scale": scale}
with open(os.path.join(out_dir, "meta.json"), "w") as f:
json.dump(meta, f)
print(f"[prep] DONE. total tokens={total:,} vocab={tok.vocab_size}")
print(f"[prep] files in {out_dir}")
if __name__ == "__main__":
main()
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