Beyond_Prompt-based_Retrieval / Biomanus /experiments /execution_audit /results_smoke2 /summary_table.csv
| audit_layer,n_success,n_tested,notes,success_rate,unit | |
| Generated server entrypoint present,816,912,server directory contains *_shim_server.py or *_server.py under app/,89.5%,mcp_generated server directories | |
| Server syntax/compile,816,816,python -m py_compile on generated shim/raw server,100.0%,MCP servers | |
| Server import,799,816,import generated server module in isolated process,97.9%,MCP servers | |
| MCP startup,816,816,stdio server starts and does not immediately traceback; waiting servers count as success,100.0%,MCP servers | |
| Help/version probe,174,519,run inferred command with --help/-h/--version when command literal is found,33.5%,servers with inferred underlying CLI | |
| Tiny fixture execution,5,12,sampled from 3472 catalog tools; required args filled with tiny FASTA/FASTQ/CSV/VCF fixtures,41.7%,stratified sampled tools | |