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description: Attribute Standardizer Output Schema in alignment with ENCODE schema
properties:
File accession:
type: string
description: "File ID/Accession"
File Type :
type: string
description: "File Types (eg. bed, bigWig)"
File format type:
type: string
description: "File Convention/Format (eg. narrowPeak)"
Output type:
type: string
description: "The output type provides additional information about the expected contents in the file."
File assembly:
type: string
description: "Type of Genome Assemblies (eg. GRCh38)"
Assay:
type: string
description: "The name of the assay performed"
Biosample term name:
type: string
description: "The human readable ontology name used to describe the biosample."
Biosample type:
type: string
description: "A categorization of biosamples into major groups(eg.induced pluripotent stem cell, stem cell)."
Biosample Organism:
type: string
description: "The species of the biosample."
Biosample treatments:
type: string
description: "The name of the chemical or biological agent applied to a biosample in order to elicit a response."
Biosample genetic modifications methods:
type: string
description: "Experimental Techniques used for genetic modification (eg. CRISPR)"
Biosample genetic modifications categories:
type: string
description: "Type of genetic modification (eg. insertion)"
Experiment Target:
type: string
description: "Experimental Targets (eg. H3K27ac-human)"
Library made from:
type: string
description: "Types of libraries created from biological samples."
Experiment date released:
type: string
description: "Date of the experiment release"
Project:
type: string
description: "The project under which the experiment was performed( eg. ENCODE)"
Lab:
type: string
description: "Lab where the processing took place."
File Download URL:
type: string
description: "File Download URL"
required:
- None |