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{"repo": "pypeit/PypeIt", "pull_number": 1121, "instance_id": "pypeit__PypeIt-1121", "issue_numbers": "", "base_commit": "c755167f5b1b09fdffa8b22ebdcccc6521fdd564", "patch": "diff --git a/pypeit/datamodel.py b/pypeit/datamodel.py\n--- a/pypeit/datamodel.py\n+++ b/pypeit/datamodel.py\n@@ -946,7 +946,7 @@ def _parse(cls, hdu, ext=None, transpose_table_arrays=False, hdu_prefix=None):\n dm_version_passed &= hdu[hduindx].header['DMODVER'] == cls.version\n # Grab it\n _d[e] = _hdu[hduindx].data if isinstance(hdu[hduindx], fits.ImageHDU) \\\n- else Table.read(hdu[hduindx])\n+ else Table.read(hdu[hduindx]).copy()\n \n for e in _ext:\n if 'DMODCLS' not in _hdu[e].header.keys() or 'DMODVER' not in _hdu[e].header.keys() \\\ndiff --git a/pypeit/scripts/run_pypeit.py b/pypeit/scripts/run_pypeit.py\n--- a/pypeit/scripts/run_pypeit.py\n+++ b/pypeit/scripts/run_pypeit.py\n@@ -117,6 +117,7 @@ def main(args):\n # QA HTML\n msgs.info('Generating QA HTML')\n pypeIt.build_qa()\n+ msgs.close()\n \n return 0\n \ndiff --git a/pypeit/scripts/show_1dspec.py b/pypeit/scripts/show_1dspec.py\n--- a/pypeit/scripts/show_1dspec.py\n+++ b/pypeit/scripts/show_1dspec.py\n@@ -28,7 +28,7 @@ def main(args):\n import sys\n import numpy as np\n \n- from PySide2.QtWidgets import QApplication\n+ from qtpy.QtWidgets import QApplication\n \n from linetools.guis.xspecgui import XSpecGui\n \n", "test_patch": "", "problem_statement": "", "hints_text": "", "created_at": "2021-01-07T20:52:53Z"}
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