Upload dataset
Browse files- README.md +266 -0
- full_patient_state/full_patient_state-00000-of-00013.parquet +3 -0
- full_patient_state/full_patient_state-00001-of-00013.parquet +3 -0
- full_patient_state/full_patient_state-00002-of-00013.parquet +3 -0
- full_patient_state/full_patient_state-00003-of-00013.parquet +3 -0
- full_patient_state/full_patient_state-00004-of-00013.parquet +3 -0
- full_patient_state/full_patient_state-00005-of-00013.parquet +3 -0
- full_patient_state/full_patient_state-00006-of-00013.parquet +3 -0
- full_patient_state/full_patient_state-00007-of-00013.parquet +3 -0
- full_patient_state/full_patient_state-00008-of-00013.parquet +3 -0
- full_patient_state/full_patient_state-00009-of-00013.parquet +3 -0
- full_patient_state/full_patient_state-00010-of-00013.parquet +3 -0
- full_patient_state/full_patient_state-00011-of-00013.parquet +3 -0
- full_patient_state/full_patient_state-00012-of-00013.parquet +3 -0
README.md
CHANGED
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@@ -186,6 +186,268 @@ dataset_info:
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num_examples: 134616330
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download_size: 11217914
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dataset_size: 4324549602
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| 189 |
- config_name: meds_admitted_er_actions
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features:
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- name: subject_id
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|
@@ -343,6 +605,10 @@ configs:
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data_files:
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- split: empty_patient_state
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path: patient_state/*.parquet
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| 346 |
- config_name: meds_admitted_er_actions
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data_files:
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- split: adm_er_clean
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| 186 |
num_examples: 134616330
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download_size: 11217914
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dataset_size: 4324549602
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| 189 |
+
- config_name: full_patient_state
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| 190 |
+
features:
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| 191 |
+
- name: ed_stay_id
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| 192 |
+
dtype: int64
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| 193 |
+
- name: subject_id
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| 194 |
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dtype: int64
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| 195 |
+
- name: hadm_id
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| 196 |
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dtype: float64
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| 197 |
+
- name: time
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| 198 |
+
dtype: timestamp[us]
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| 199 |
+
- name: Chemistry-Blood
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| 200 |
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dtype: float64
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| 201 |
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- name: Hematology-Blood
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| 202 |
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dtype: float64
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| 203 |
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- name: Hematology-Urine
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| 204 |
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dtype: float64
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| 205 |
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- name: Blood Gas-Blood
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dtype: float64
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| 207 |
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- name: Chemistry-Urine
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| 208 |
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dtype: float64
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| 209 |
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- name: Chemistry-Other Body Fluid
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| 210 |
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dtype: float64
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| 211 |
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- name: Hematology-Cerebrospinal Fluid
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| 212 |
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dtype: float64
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| 213 |
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- name: Chemistry-Cerebrospinal Fluid
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| 214 |
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dtype: float64
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| 215 |
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- name: Hematology-Ascites
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| 216 |
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dtype: float64
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| 217 |
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- name: Chemistry-Ascites
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| 218 |
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dtype: float64
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| 219 |
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- name: Chemistry-Pleural
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| 220 |
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dtype: float64
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| 221 |
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- name: Hematology-Pleural
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| 222 |
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dtype: float64
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| 223 |
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- name: Hematology-Joint Fluid
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| 224 |
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dtype: float64
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| 225 |
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- name: Chemistry-Stool
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| 226 |
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dtype: float64
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| 227 |
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- name: Hematology-Other Body Fluid
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| 228 |
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dtype: float64
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| 229 |
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- name: Blood Gas-Other Body Fluid
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| 230 |
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dtype: float64
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| 231 |
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- name: Hematology-Bone Marrow
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| 232 |
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dtype: float64
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| 233 |
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- name: Hematology-Stool
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| 234 |
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dtype: float64
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| 235 |
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- name: Chemistry-Joint Fluid
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| 236 |
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dtype: float64
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| 237 |
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- name: URINE
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| 238 |
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dtype: float64
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| 239 |
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- name: Rapid Respiratory Viral Screen & Culture
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| 240 |
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dtype: float64
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| 241 |
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- name: PERITONEAL FLUID
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| 242 |
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dtype: float64
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| 243 |
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- name: BLOOD CULTURE
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| 244 |
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dtype: float64
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| 245 |
+
- name: STOOL
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| 246 |
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dtype: float64
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| 247 |
+
- name: OTHER
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| 248 |
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dtype: float64
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| 249 |
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- name: PLEURAL FLUID
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| 250 |
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dtype: float64
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| 251 |
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- name: TISSUE
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| 252 |
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dtype: float64
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| 253 |
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- name: SEROLOGY/BLOOD
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| 254 |
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dtype: float64
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| 255 |
+
- name: IMMUNOLOGY
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| 256 |
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dtype: float64
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| 257 |
+
- name: MRSA SCREEN
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| 258 |
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dtype: float64
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| 259 |
+
- name: SWAB
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| 260 |
+
dtype: float64
|
| 261 |
+
- name: JOINT FLUID
|
| 262 |
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dtype: float64
|
| 263 |
+
- name: SPUTUM
|
| 264 |
+
dtype: float64
|
| 265 |
+
- name: FLUID,OTHER
|
| 266 |
+
dtype: float64
|
| 267 |
+
- name: ABSCESS
|
| 268 |
+
dtype: float64
|
| 269 |
+
- name: BRONCHOALVEOLAR LAVAGE
|
| 270 |
+
dtype: float64
|
| 271 |
+
- name: CSF;SPINAL FLUID
|
| 272 |
+
dtype: float64
|
| 273 |
+
- name: Blood (CMV AB)
|
| 274 |
+
dtype: float64
|
| 275 |
+
- name: Blood (EBV)
|
| 276 |
+
dtype: float64
|
| 277 |
+
- name: BILE
|
| 278 |
+
dtype: float64
|
| 279 |
+
- name: vitals_checked
|
| 280 |
+
dtype: float64
|
| 281 |
+
- name: current_temperature
|
| 282 |
+
dtype: float64
|
| 283 |
+
- name: current_heartrate
|
| 284 |
+
dtype: float64
|
| 285 |
+
- name: current_resprate
|
| 286 |
+
dtype: float64
|
| 287 |
+
- name: current_o2sat
|
| 288 |
+
dtype: float64
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| 289 |
+
- name: current_sbp
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| 290 |
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dtype: float64
|
| 291 |
+
- name: current_dbp
|
| 292 |
+
dtype: float64
|
| 293 |
+
- name: current_pain
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| 294 |
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dtype: large_string
|
| 295 |
+
- name: current_pulse_pressure
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| 296 |
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dtype: float64
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| 297 |
+
- name: current_map
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| 298 |
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dtype: float64
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| 299 |
+
- name: time_since_last_hrs
|
| 300 |
+
dtype: float64
|
| 301 |
+
- name: temperature_rolling2h
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| 302 |
+
dtype: float64
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| 303 |
+
- name: temperature_delta
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| 304 |
+
dtype: float64
|
| 305 |
+
- name: temperature_rate
|
| 306 |
+
dtype: float64
|
| 307 |
+
- name: heartrate_rolling2h
|
| 308 |
+
dtype: float64
|
| 309 |
+
- name: heartrate_delta
|
| 310 |
+
dtype: float64
|
| 311 |
+
- name: heartrate_rate
|
| 312 |
+
dtype: float64
|
| 313 |
+
- name: resprate_rolling2h
|
| 314 |
+
dtype: float64
|
| 315 |
+
- name: resprate_delta
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| 316 |
+
dtype: float64
|
| 317 |
+
- name: resprate_rate
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| 318 |
+
dtype: float64
|
| 319 |
+
- name: o2sat_rolling2h
|
| 320 |
+
dtype: float64
|
| 321 |
+
- name: o2sat_delta
|
| 322 |
+
dtype: float64
|
| 323 |
+
- name: o2sat_rate
|
| 324 |
+
dtype: float64
|
| 325 |
+
- name: sbp_rolling2h
|
| 326 |
+
dtype: float64
|
| 327 |
+
- name: sbp_delta
|
| 328 |
+
dtype: float64
|
| 329 |
+
- name: sbp_rate
|
| 330 |
+
dtype: float64
|
| 331 |
+
- name: dbp_rolling2h
|
| 332 |
+
dtype: float64
|
| 333 |
+
- name: dbp_delta
|
| 334 |
+
dtype: float64
|
| 335 |
+
- name: dbp_rate
|
| 336 |
+
dtype: float64
|
| 337 |
+
- name: Other
|
| 338 |
+
dtype: float64
|
| 339 |
+
- name: Analgesic - Opioid/NSAID
|
| 340 |
+
dtype: float64
|
| 341 |
+
- name: Antiemetic
|
| 342 |
+
dtype: float64
|
| 343 |
+
- name: Analgesic - Acetaminophen
|
| 344 |
+
dtype: float64
|
| 345 |
+
- name: Antibiotic
|
| 346 |
+
dtype: float64
|
| 347 |
+
- name: Benzodiazepine - Sedative/Anxiolytic
|
| 348 |
+
dtype: float64
|
| 349 |
+
- name: Analgesic - NSAID
|
| 350 |
+
dtype: float64
|
| 351 |
+
- name: Bronchodilator
|
| 352 |
+
dtype: float64
|
| 353 |
+
- name: Antiplatelet
|
| 354 |
+
dtype: float64
|
| 355 |
+
- name: GI - Acid Suppression
|
| 356 |
+
dtype: float64
|
| 357 |
+
- name: Corticosteroid
|
| 358 |
+
dtype: float64
|
| 359 |
+
- name: Beta Blocker
|
| 360 |
+
dtype: float64
|
| 361 |
+
- name: Diuretic
|
| 362 |
+
dtype: float64
|
| 363 |
+
- name: Antipsychotic
|
| 364 |
+
dtype: float64
|
| 365 |
+
- name: Anticoagulant
|
| 366 |
+
dtype: float64
|
| 367 |
+
- name: Insulin/Glucose
|
| 368 |
+
dtype: float64
|
| 369 |
+
- name: Calcium Channel Blocker
|
| 370 |
+
dtype: float64
|
| 371 |
+
- name: Nitrate
|
| 372 |
+
dtype: float64
|
| 373 |
+
- name: ACE Inhibitor
|
| 374 |
+
dtype: float64
|
| 375 |
+
- name: IV Fluid
|
| 376 |
+
dtype: float64
|
| 377 |
+
- name: Anticonvulsant
|
| 378 |
+
dtype: float64
|
| 379 |
+
- name: Antiarrhythmic
|
| 380 |
+
dtype: float64
|
| 381 |
+
- name: weight
|
| 382 |
+
dtype: float64
|
| 383 |
+
- name: ecg_status
|
| 384 |
+
dtype: float64
|
| 385 |
+
- name: rad_status
|
| 386 |
+
dtype: float64
|
| 387 |
+
- name: in_ed
|
| 388 |
+
dtype: int64
|
| 389 |
+
- name: in_ward
|
| 390 |
+
dtype: int64
|
| 391 |
+
- name: ed_boarding
|
| 392 |
+
dtype: int64
|
| 393 |
+
- name: terminal_event
|
| 394 |
+
dtype: large_string
|
| 395 |
+
- name: gender
|
| 396 |
+
dtype: large_string
|
| 397 |
+
- name: anchor_age
|
| 398 |
+
dtype: int64
|
| 399 |
+
- name: arrival_transport
|
| 400 |
+
dtype: large_string
|
| 401 |
+
- name: acuity
|
| 402 |
+
dtype: decimal128(10, 9)
|
| 403 |
+
- name: height
|
| 404 |
+
dtype: float64
|
| 405 |
+
- name: recon_ace_inhibitor
|
| 406 |
+
dtype: uint8
|
| 407 |
+
- name: recon_analgesic___nsaid
|
| 408 |
+
dtype: uint8
|
| 409 |
+
- name: recon_analgesic___opioid_nsaid
|
| 410 |
+
dtype: uint8
|
| 411 |
+
- name: recon_antiarrhythmic
|
| 412 |
+
dtype: uint8
|
| 413 |
+
- name: recon_antibiotic
|
| 414 |
+
dtype: uint8
|
| 415 |
+
- name: recon_anticoagulant
|
| 416 |
+
dtype: uint8
|
| 417 |
+
- name: recon_anticonvulsant
|
| 418 |
+
dtype: uint8
|
| 419 |
+
- name: recon_antiemetic
|
| 420 |
+
dtype: uint8
|
| 421 |
+
- name: recon_antiplatelet
|
| 422 |
+
dtype: uint8
|
| 423 |
+
- name: recon_antipsychotic
|
| 424 |
+
dtype: uint8
|
| 425 |
+
- name: recon_benzodiazepine___sedative_anxiolytic
|
| 426 |
+
dtype: uint8
|
| 427 |
+
- name: recon_beta_blocker
|
| 428 |
+
dtype: uint8
|
| 429 |
+
- name: recon_bronchodilator
|
| 430 |
+
dtype: uint8
|
| 431 |
+
- name: recon_calcium_channel_blocker
|
| 432 |
+
dtype: uint8
|
| 433 |
+
- name: recon_corticosteroid
|
| 434 |
+
dtype: uint8
|
| 435 |
+
- name: recon_diuretic
|
| 436 |
+
dtype: uint8
|
| 437 |
+
- name: recon_gi___acid_suppression
|
| 438 |
+
dtype: uint8
|
| 439 |
+
- name: recon_insulin_glucose
|
| 440 |
+
dtype: uint8
|
| 441 |
+
- name: recon_nitrate
|
| 442 |
+
dtype: uint8
|
| 443 |
+
- name: admission_type
|
| 444 |
+
dtype: large_string
|
| 445 |
+
splits:
|
| 446 |
+
- name: full_patient_state
|
| 447 |
+
num_bytes: 6080990177
|
| 448 |
+
num_examples: 6551723
|
| 449 |
+
download_size: 104577629
|
| 450 |
+
dataset_size: 6080990177
|
| 451 |
- config_name: meds_admitted_er_actions
|
| 452 |
features:
|
| 453 |
- name: subject_id
|
|
|
|
| 605 |
data_files:
|
| 606 |
- split: empty_patient_state
|
| 607 |
path: patient_state/*.parquet
|
| 608 |
+
- config_name: full_patient_state
|
| 609 |
+
data_files:
|
| 610 |
+
- split: full_patient_state
|
| 611 |
+
path: full_patient_state/full_patient_state-*
|
| 612 |
- config_name: meds_admitted_er_actions
|
| 613 |
data_files:
|
| 614 |
- split: adm_er_clean
|
full_patient_state/full_patient_state-00000-of-00013.parquet
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:7bcf9dfdefdcb395c36fe5acff961a6fcb0f610f78b50df4bfd7ce598600fbec
|
| 3 |
+
size 8100524
|
full_patient_state/full_patient_state-00001-of-00013.parquet
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:ccb0ecc13a2630a1ab2df2501acdde4168ab14751bbde5eafbe6fbd9e2a13b6d
|
| 3 |
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size 8086735
|
full_patient_state/full_patient_state-00002-of-00013.parquet
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
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| 2 |
+
oid sha256:693765cde74d636e45725864f591cc7daff0b5ecf17f98c0c3f159e633f462d2
|
| 3 |
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size 8017747
|
full_patient_state/full_patient_state-00003-of-00013.parquet
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:8642c3812c35290a352a0d4b918c5152823794360a70f479430dc75787eeb040
|
| 3 |
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size 7982666
|
full_patient_state/full_patient_state-00004-of-00013.parquet
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
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| 2 |
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oid sha256:4d2abac5b0dddc515552846542722492399bc248b26ffe0cf17fc9734f4e9b75
|
| 3 |
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size 8045862
|
full_patient_state/full_patient_state-00005-of-00013.parquet
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
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| 2 |
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oid sha256:bbd5659cd8db2a8415b68821069188649fa42bb9121ff915e38f6bb713235688
|
| 3 |
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size 8080314
|
full_patient_state/full_patient_state-00006-of-00013.parquet
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
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| 2 |
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oid sha256:cba71805f8314ce8be4d641549dab1ac97d978a2566c80e54d3d74ea89b4861c
|
| 3 |
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size 8083207
|
full_patient_state/full_patient_state-00007-of-00013.parquet
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
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| 2 |
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oid sha256:e8d84100e47de04f024a66453dd98c81d9ba04cdd4590a7a9d9b16d6bfffb728
|
| 3 |
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size 7989726
|
full_patient_state/full_patient_state-00008-of-00013.parquet
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
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| 2 |
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oid sha256:6ddddf05b1573894a85c8de9a829beaf85f6428341fab7c69799114f608fb976
|
| 3 |
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size 7977559
|
full_patient_state/full_patient_state-00009-of-00013.parquet
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
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| 2 |
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oid sha256:1112f3b059769cce1aec4e4e000f7358898cbcacfcdfa262e097dc1b65b75a30
|
| 3 |
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size 8022040
|
full_patient_state/full_patient_state-00010-of-00013.parquet
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
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| 2 |
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oid sha256:31f9e00c5d0b7b3af8730dae757a1e15e13e66fae0e73af195d95d5f43658062
|
| 3 |
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size 8037183
|
full_patient_state/full_patient_state-00011-of-00013.parquet
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
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| 2 |
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oid sha256:4b7d17d808421a2f7507386b691831d0d89ee8fc88ab6e37ebb1a0089d4e386a
|
| 3 |
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size 8128151
|
full_patient_state/full_patient_state-00012-of-00013.parquet
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:56d2b75ef5054c23454cb989826326780d94b6de0a664aab2df646d46df8e614
|
| 3 |
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size 8025915
|