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1
- ---
2
- license: other
3
- license_name: physionet-credentialed-health-data-1.5.0
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- license_link: https://physionet.org/content/mimiciv/view-license/3.1/
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- pretty_name: raw_data
6
- configs:
7
- - config_name: cohort_base
8
- data_files:
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- - split: base
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- path: cohort/base-*
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- - config_name: cohort_with_triage
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- data_files:
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- - split: with_triage
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- path: cohort/with_triage-*
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- - config_name: ecg
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- data_files:
17
- - split: ecg
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- path: ecg/ecg-*
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- - config_name: ed_only_meds
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- data_files:
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- - split: ed_only
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- path: stay_medications/ed_only-*
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- - config_name: height
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- data_files:
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- - split: height
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- path: height/height-*
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- - config_name: labs_base
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- data_files:
29
- - split: train
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- path: lab_events/train-*
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- - config_name: medrecon
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- data_files:
33
- - split: medrecon
34
- path: pre_arrival_meds/medrecon-*
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- - config_name: meds_admitted
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- data_files:
37
- - split: meds_admit
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- path: stay_medications/meds_admit-*
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- - config_name: microbiology_events
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- data_files:
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- - split: microbiology_events
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- path: microbiology/microbiology_events-*
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- - config_name: radiology_details
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- data_files:
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- - split: radiology_details
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- path: radiology/radiology_details-*
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- - config_name: triage
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- data_files:
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- - split: triage
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- path: triage/triage-*
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- - config_name: vitals
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- data_files:
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- - split: vitals
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- path: vitals/vitals-*
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- - config_name: weight
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- data_files:
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- - split: weight
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- path: weight/weight-*
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- - config_name: cohort_full
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- data_files:
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- - split: cohort_full
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- path: cohort/*.parquet
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- dataset_info:
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- - config_name: cohort_base
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- features:
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- - name: subject_id
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- dtype: int64
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- - name: ed_stay_id
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- dtype: int64
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- - name: hadm_id
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- dtype: float64
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- - name: ed_intime
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- dtype: large_string
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- - name: ed_outtime
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- dtype: large_string
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- - name: disposition
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- dtype: large_string
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- - name: race
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- dtype: large_string
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- - name: arrival_transport
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- dtype: large_string
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- dtype: large_string
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- dtype: large_string
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- - name: admittime
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- - name: dischtime
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- dtype: large_string
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- - name: admission_type
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- dtype: large_string
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- - name: discharge_location
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- - name: marital_status
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- dtype: large_string
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- splits:
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- - name: base
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- num_bytes: 134237598
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- num_examples: 399573
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- download_size: 20691220
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- dataset_size: 134237598
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- - config_name: cohort_full
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- features:
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- - name: subject_id
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- dtype: int64
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- - name: ed_stay_id
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- dtype: int64
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- - name: hadm_id
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- dtype: int64
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- - name: ed_intime
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- dtype: timestamp[us]
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- - name: ed_outtime
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- dtype: timestamp[us]
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- - name: disposition
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- dtype: large_string
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- - name: race
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- dtype: large_string
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- - name: arrival_transport
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- dtype: large_string
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- - name: first_careunit
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- dtype: large_string
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- dtype: large_string
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- dtype: int64
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- dtype: large_string
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- - name: marital_status
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- dtype: large_string
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- - name: ed_stay_id_2
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- dtype: float64
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- - name: stay_window_start
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- dtype: timestamp[us]
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- - name: stay_window_end
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- dtype: timestamp[us]
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- - name: ed_boarding_time_hrs
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- dtype: float64
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- splits:
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- - name: cohort_full
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- num_bytes: 112566261
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- num_examples: 397675
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- download_size: 26138569
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- dataset_size: 112566261
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- - config_name: cohort_with_triage
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- features:
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- - name: subject_id
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- dtype: int64
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- - name: ed_stay_id
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- dtype: int64
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- - name: hadm_id
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- dtype: float64
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- - name: ed_intime
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- dtype: large_string
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- - name: ed_outtime
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- dtype: large_string
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- - name: disposition
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- dtype: large_string
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- - name: race
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- dtype: large_string
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- - name: arrival_transport
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- dtype: large_string
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- - name: first_careunit
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- dtype: large_string
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- - name: first_icu_intime
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- dtype: large_string
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- - name: cohort_label
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- dtype: large_string
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- - name: gender
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- dtype: large_string
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- - name: anchor_age
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- dtype: int64
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- dtype: int64
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- - name: age_at_visit
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- - name: dod
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- dtype: large_string
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- - name: admittime
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- dtype: large_string
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- - name: dischtime
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- dtype: large_string
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- - name: admission_type
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- dtype: large_string
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- - name: discharge_location
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- dtype: large_string
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- - name: insurance
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- dtype: large_string
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- - name: language
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- dtype: large_string
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- - name: marital_status
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- dtype: large_string
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- dtype: float64
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- - name: stay_window_start
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- dtype: large_string
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- - name: stay_window_end
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- dtype: large_string
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- dtype: float64
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- - name: temperature
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- dtype: float64
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- - name: heartrate
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- dtype: float64
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- - name: resprate
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- dtype: float64
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- - name: o2sat
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- dtype: float64
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- - name: sbp
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- dtype: float64
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- dtype: float64
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- - name: pain
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- dtype: large_string
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- - name: acuity
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- splits:
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- num_bytes: 188206416
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- num_examples: 397675
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- download_size: 33043596
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- dataset_size: 188206416
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- - config_name: ecg
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- features:
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- - name: ed_stay_id
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- dtype: int64
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- - name: subject_id
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- dtype: int64
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- - name: study_id
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- dtype: int64
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- - name: ecg_time
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- dtype: large_string
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- - name: machine_report
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- splits:
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- - name: ecg
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- num_bytes: 35781132
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- num_examples: 247083
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- download_size: 10387666
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- dataset_size: 35781132
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- - config_name: ed_only_meds
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- features:
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- - name: subject_id
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- dtype: int64
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- - name: stay_id
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- dtype: int64
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- - name: hadm_id
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- - name: disposition
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- dtype: large_string
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- - name: charttime
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- dtype: large_string
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- - name: med_rn
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- dtype: int64
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- - name: medication
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- num_bytes: 33616142
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- - config_name: height
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- - name: subject_id
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- dtype: int64
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- - name: chartdate
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- dtype: large_string
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- - name: result_name
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- - name: height
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- num_bytes: 36955070
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- num_examples: 656979
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- download_size: 6808537
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- dataset_size: 36955070
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- - config_name: labs_base
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- features:
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- - name: ed_stay_id
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- dtype: int64
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- - name: subject_id
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- dtype: int64
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- - name: hadm_id
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- dtype: int64
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- dtype: bool
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- - name: train
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- - config_name: medrecon
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- features:
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- - name: ed_stay_id
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- dtype: int64
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- - name: subject_id
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- download_size: 36681696
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- dataset_size: 400531544
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- - config_name: meds_admitted
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- features:
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- - name: subject_id
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- dtype: int64
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- - name: stay_id
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- dtype: int64
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- - name: hadm_id
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- dtype: float64
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- dtype: large_string
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- dtype: float64
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- - name: pyxis_medication
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- dtype: large_string
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- dtype: large_string
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- - name: scheduletime
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- dtype: large_string
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- - name: in_er
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- dtype: bool
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- - name: meds_admit
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- num_bytes: 1508729053
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- num_examples: 8771619
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- download_size: 135945142
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- dataset_size: 1508729053
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- - config_name: microbiology_events
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- features:
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- - name: subject_id
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- dtype: int64
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- - name: hadm_id
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- dtype: int64
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- - name: ed_stay_id
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- dtype: int64
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- - name: microevent_id
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- dtype: int64
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- - name: micro_specimen_id
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- dtype: int64
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- - name: charttime
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- dtype: timestamp[us]
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- - name: spec_itemid
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- - name: microbiology_events
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- num_bytes: 184746779
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- num_examples: 842611
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- download_size: 22865375
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- dataset_size: 184746779
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- - config_name: radiology_details
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- features:
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- - name: ed_stay_id
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- dtype: int64
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- - name: subject_id
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- dtype: int64
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502
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- download_size: 9120401
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- dataset_size: 64267748
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- - config_name: vitals
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- features:
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- - name: ed_stay_id
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- dtype: int64
510
- - name: subject_id
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- dtype: int64
512
- - name: charttime
513
- dtype: large_string
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- - name: temperature
515
- dtype: float64
516
- - name: heartrate
517
- dtype: float64
518
- - name: resprate
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- dtype: float64
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- - name: o2sat
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- dtype: float64
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- dtype: float64
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- - name: dbp
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- dtype: float64
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- - name: rhythm
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- dtype: large_string
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- dtype: large_string
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531
- - name: vitals
532
- num_bytes: 163957292
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- num_examples: 1496038
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- download_size: 28493237
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- dataset_size: 163957292
536
- - config_name: weight
537
- features:
538
- - name: subject_id
539
- dtype: int64
540
- - name: chartdate
541
- dtype: large_string
542
- - name: result_name
543
- dtype: large_string
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- - name: result_value
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- dtype: float64
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- - name: __index_level_0__
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- dtype: int64
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- splits:
549
- - name: weight
550
- num_bytes: 92656744
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- num_examples: 1647231
552
- download_size: 16255986
553
- dataset_size: 92656744
554
- ---
555
-
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-
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-
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- ## weight
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-
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-
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-
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-
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-
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- Height and weight measurement records from hosp.omr for cohort patients — separated to take single measurements of height as an average of all available height measurements for a patient and retaining all separate weight measurements. Duplicates were dropped Used to supplement ED and inpatient state features with recent baseline measurements.
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-
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-
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-
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-
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-
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- **License:** PhysioNet Credentialed Health Data License 1.5.0 — https://physionet.org/content/mimiciv/view-license/3.1/
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-
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- ## cohort_full
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-
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- Processed ED patient cohort derived from MIMIC-IV. One row per ED visit (ed_stay_id). Built from cohort_base (BigQuery) with the following post-processing steps: (1) AGAINST ADVICE discharge_location records removed — patient-driven departures are out of scope. (2) Consecutive ED visits sharing a hadm_id collapsed into single rows; second ed_stay_id stored in ed_stay_id_2. (3) stay_window_start/stay_window_end columns added covering ED arrival to final discharge. (4) ed_boarding_time_hrs added: hours in ED after admission decision (null for ED-only patients). Intended as the primary cohort table for feature engineering and RL state construction.
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-
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- **License:** PhysioNet Credentialed Health Data License 1.5.0 — https://physionet.org/content/mimiciv/view-license/3.1/
 
1
+ ---
2
+ license: other
3
+ license_name: physionet-credentialed-health-data-1.5.0
4
+ license_link: https://physionet.org/content/mimiciv/view-license/3.1/
5
+ pretty_name: raw_data
6
+ configs:
7
+ - config_name: cohort_base
8
+ data_files:
9
+ - split: base
10
+ path: cohort/base-*
11
+ - config_name: cohort_with_triage
12
+ data_files:
13
+ - split: with_triage
14
+ path: cohort/with_triage-*
15
+ - config_name: ecg
16
+ data_files:
17
+ - split: ecg
18
+ path: ecg/ecg-*
19
+ - config_name: ed_only_meds
20
+ data_files:
21
+ - split: ed_only
22
+ path: stay_medications/ed_only-*
23
+ - config_name: height
24
+ data_files:
25
+ - split: height
26
+ path: height/height-*
27
+ - config_name: labs_base
28
+ data_files:
29
+ - split: train
30
+ path: lab_events/train-*
31
+ - config_name: medrecon
32
+ data_files:
33
+ - split: medrecon
34
+ path: pre_arrival_meds/medrecon-*
35
+ - config_name: meds_admitted
36
+ data_files:
37
+ - split: meds_admit
38
+ path: stay_medications/meds_admit-*
39
+ - config_name: microbiology_events
40
+ data_files:
41
+ - split: microbiology_events
42
+ path: microbiology/microbiology_events-*
43
+ - config_name: radiology_details
44
+ data_files:
45
+ - split: radiology_details
46
+ path: radiology/radiology_details-*
47
+ - config_name: triage
48
+ data_files:
49
+ - split: triage
50
+ path: triage/triage-*
51
+ - config_name: vitals
52
+ data_files:
53
+ - split: vitals
54
+ path: vitals/vitals-*
55
+ - config_name: weight
56
+ data_files:
57
+ - split: weight
58
+ path: weight/weight-*
59
+ - config_name: cohort_full
60
+ data_files:
61
+ - split: cohort_full
62
+ path: cohort/full-*.parquet
63
+ dataset_info:
64
+ - config_name: cohort_base
65
+ features:
66
+ - name: subject_id
67
+ dtype: int64
68
+ - name: ed_stay_id
69
+ dtype: int64
70
+ - name: hadm_id
71
+ dtype: float64
72
+ - name: ed_intime
73
+ dtype: large_string
74
+ - name: ed_outtime
75
+ dtype: large_string
76
+ - name: disposition
77
+ dtype: large_string
78
+ - name: race
79
+ dtype: large_string
80
+ - name: arrival_transport
81
+ dtype: large_string
82
+ - name: first_careunit
83
+ dtype: large_string
84
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+ dataset_size: 64267748
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+ - name: dbp
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+ - name: rhythm
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+ dtype: large_string
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+ - name: pain
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+ dtype: large_string
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+ splits:
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+ - name: vitals
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+ download_size: 28493237
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+ dataset_size: 163957292
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+ - config_name: weight
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+ features:
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+ - name: subject_id
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+ dtype: int64
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+ dtype: large_string
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+ dtype: large_string
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+ - name: result_value
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+ dtype: float64
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+ - name: __index_level_0__
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+ dtype: int64
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+ splits:
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+ - name: weight
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+ num_bytes: 92656744
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+ num_examples: 1647231
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+ download_size: 16255986
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+ dataset_size: 92656744
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+ ---
555
+
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+
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+
558
+ ## weight
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+
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+
561
+
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+
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+
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+ Height and weight measurement records from hosp.omr for cohort patients — separated to take single measurements of height as an average of all available height measurements for a patient and retaining all separate weight measurements. Duplicates were dropped Used to supplement ED and inpatient state features with recent baseline measurements.
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+
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+
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+
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+
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+
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+ **License:** PhysioNet Credentialed Health Data License 1.5.0 — https://physionet.org/content/mimiciv/view-license/3.1/
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+
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+ ## cohort_full
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+
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+ Processed ED patient cohort derived from MIMIC-IV. One row per ED visit (ed_stay_id). Built from cohort_base (BigQuery) with the following post-processing steps: (1) AGAINST ADVICE discharge_location records removed — patient-driven departures are out of scope. (2) Consecutive ED visits sharing a hadm_id collapsed into single rows; second ed_stay_id stored in ed_stay_id_2. (3) stay_window_start/stay_window_end columns added covering ED arrival to final discharge. (4) ed_boarding_time_hrs added: hours in ED after admission decision (null for ED-only patients). Intended as the primary cohort table for feature engineering and RL state construction.
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+
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+ **License:** PhysioNet Credentialed Health Data License 1.5.0 — https://physionet.org/content/mimiciv/view-license/3.1/