Datasets:
Hugo
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Fix bibtex formatting, remove benchmark results section and benchmarking code link
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README.md
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# HUGO-Bench
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**Hierarchical Unsupervised Grouping of Organisms Benchmark**
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**Note**: "Uncertain" indicates cases where manual validation was uncertain of the initial label.
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## Benchmark Results
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Using HUGO-Bench, we evaluated combinations of 5 ViT models 5 dimensionality reduction methods 4 clustering algorithms. Key findings:
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| Configuration | V-Measure | Notes |
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| DINOv3 + t-SNE + Hierarchical (K=30) | **0.958** | Best supervised |
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| DINOv3 + t-SNE + HDBSCAN | **0.943** | Best unsupervised |
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| DINOv3 + t-SNE + HDBSCAN | 33-37 clusters | ~10% overestimate of true species count |
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For complete benchmarking results, see our paper and the [interactive demo](https://hugomarkoff.github.io/animal_visual_transformer/).
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## Citation
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If you use HUGO-Bench, please cite:
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@dataset{hugo_bench_2026,
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author = {Markoff, Hugo and Bengtson, Stefan Hein and Ørsted, Michael},
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title = {HUGO-Bench: Hierarchical Unsupervised Grouping of Organisms Benchmark},
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url = {https://huggingface.co/datasets/AI-EcoNet/HUGO-Bench},
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note = {Expert-validated camera-trap images for zero-shot clustering. Image sources from LILA BC.}
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}
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## Links
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- [Interactive Demo](https://hugomarkoff.github.io/animal_visual_transformer/)
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- [Benchmarking Code](https://github.com/hugomarkoff/animal_visual_transformer)
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- Paper: *Vision Transformers for Zero-Shot Clustering of Animal Images: A Comparative Benchmarking Study*
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## Acknowledgments
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- 100K<n<1M
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# HUGO-Bench
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**Hierarchical Unsupervised Grouping of Organisms Benchmark**
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**Note**: "Uncertain" indicates cases where manual validation was uncertain of the initial label.
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## Citation
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If you use HUGO-Bench, please cite:
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```bibtex
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@dataset{hugo_bench_2026,
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author = {Markoff, Hugo and Bengtson, Stefan Hein and Ørsted, Michael},
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title = {HUGO-Bench: Hierarchical Unsupervised Grouping of Organisms Benchmark},
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url = {https://huggingface.co/datasets/AI-EcoNet/HUGO-Bench},
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note = {Expert-validated camera-trap images for zero-shot clustering. Image sources from LILA BC.}
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}
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```
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## Links
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- [Interactive Demo](https://hugomarkoff.github.io/animal_visual_transformer/)
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- Paper: *Vision Transformers for Zero-Shot Clustering of Animal Images: A Comparative Benchmarking Study*
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## Acknowledgments
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