import argparse def parse_args(): parser = argparse.ArgumentParser( description="Compute the angular power spectrum of a density catalog and write it as a " "single stacked PowerSpectrum parquet." ) parser.add_argument( "--parquet-path", type=str, required=True, help="Path / glob to the density parquet(s). One example (shell) per row.", ) parser.add_argument( "--output-path", type=str, required=True, help="Path to save the processed dataset.", ) parser.add_argument("--codec", default="SNAPPY", help="target compression codec (default: SNAPPY)") parser.add_argument( "--name", type=str, required=True, help="Name (legend label) of the output dataset.", ) parser.add_argument( "--lmax", type=int, default=1500, help="Maximum multipole moment. For masked (off-center observer) fields this is the " "underlying lmax that is then binned into nlb-width bandpowers.", ) parser.add_argument( "--normalization", type=str, default="per_plane", choices=["per_plane", "global"], help="Normalization for the overdensity field.", ) parser.add_argument( "--deconvolve", type=str, default="none", choices=["none", "ngp", "rbf"], help="Spherical mass-assignment-window deconvolution applied to the overdensity before " "the spectrum: 'none' (default), 'ngp' (HEALPix pixel window) or 'rbf' (-> 'rbf_neighbor').", ) parser.add_argument( "--nlb", type=int, default=16, help="Bandpower bin width for the masked (off-center observer) estimator.", ) parser.add_argument( "--apodization-deg", type=float, default=2.0, dest="apodization_deg", help="Apodization scale (degrees) for the observer-visibility mask (off-center only).", ) return parser.parse_args() def main(): args = parse_args() import jax jax.config.update("jax_enable_x64", True) import numpy as np import pyarrow.parquet as pq from datasets import load_dataset from jax_fli.io import Catalog from jax_fli import PowerSpectrum from jax_fli import units, SphericalKappaField from jax_fli.data.masks import build_observer_visibility_mask from jax_fli.summary_statistics import compute_mcm import jax.numpy as jnp from tqdm.auto import tqdm # Stream the dataset so big multi-shell globs do not int32-overflow on combine_chunks. dataset = load_dataset("parquet", data_files=args.parquet_path, split="train", streaming=True) deconv_method = None if args.deconvolve == "none" else {"rbf": "rbf_neighbor"}.get(args.deconvolve, args.deconvolve) spectras = [] cosmology_prev = None mask = None mcm = None mask_built = False def tree_all_close(tree1, tree2, rtol=1e-5, atol=1e-8): return jax.tree.all(jax.tree.map(lambda x, y: jnp.allclose(x, y, rtol=rtol, atol=atol), tree1, tree2)) for ds in tqdm(dataset , desc="Processing shells", unit=" shell"): cat = Catalog.from_dataset(ds) field , cosmology = cat.field[0], cat.cosmology[0] if cosmology_prev is not None and not tree_all_close(cosmology, cosmology_prev): raise ValueError("All shells must share the same cosmology.") cosmology_prev = cosmology # Observer-visibility mask + MCM are constant across shells (same observer/nside) -> build # once. supersample=1 keeps the apodized footprint memory-bounded at nside 2048 (the # supersample=4 default builds an nside*4=8192 grid -> ~0.8B pixels -> OOM). A center # observer yields the scalar 1 -> mask=None (full sky, plain Cl). if not mask_built: vis = build_observer_visibility_mask( field.observer_position, field.nside, apodization_scale_deg=args.apodization_deg, supersample=1 ) mask = None if jnp.ndim(vis) == 0 else vis if mask is not None: mcm = compute_mcm(mask, lmax=args.lmax, nlb=args.nlb, pol=False, method="healpy") mask_built = True if isinstance(field, SphericalKappaField): # For kappa fields no conversion is needed overdensity = field else: overdensity = field.to(units.OVERDENSITY, normalization=args.normalization) if deconv_method is not None: # Deconvolve at the field's native bandlimit (default 3*nside-1, which # satisfies s2fft's lmax >= 2*nside-1); angular_cl truncates to args.lmax. overdensity = overdensity.deconvolve(deconv_method) spectra = overdensity.angular_cl(method="healpy", lmax=args.lmax, mask=mask, mcm=mcm, nlb=args.nlb) # Per-shell density names differ; normalize before stacking so stack's name check passes. spectras.append(spectra.replace(name=args.name)) # A single source row already yields an (S, n_ell) batched spectrum -> do not re-stack it. stacked = spectras[0] if len(spectras) == 1 else PowerSpectrum.stack(spectras) stacked = stacked.replace(name=args.name) spec_cat = Catalog(field=stacked, cosmology=cosmology) table = spec_cat.to_dataset().with_format("arrow")[:] pq.write_table(table, args.output_path, compression=args.codec, use_dictionary=True) if __name__ == "__main__": main()