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README.md
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924 million small molecules screened for blood-brain barrier (BBB) permeability using the [BBB-Nuke](https://github.com/ATTN-Lab) pipeline.
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## Screening Pipeline
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Each compound was scored through:
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1. **Standardization** - SMILES canonicalization via RDKit
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2. **Physicochemical properties** - MW, LogP, TPSA, HBD, HBA, Fsp3, heavy atom count
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3. **pKa prediction** - Representative pKa via MolGpKa
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4. **CNS-MPO scoring** - Multi-parameter optimization (6 properties)
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5. **Efflux transporter prediction** - 7 efflux proteins (MDR1, ABCG2, MRP1/2/4, MATE1, OAT3)
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6. **Classifier + heuristic** - Final P_BBB probability score
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## Data Sources
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| Source | Files | Compounds |
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## Key Columns
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## Compute
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924 million small molecules screened for blood-brain barrier (BBB) permeability using the [BBB-Nuke](https://github.com/ATTN-Lab) pipeline.
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## Data Sources
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| Source | Files | Compounds |
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## Key Columns
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- - Canonical SMILES
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- - BBB permeability probability (0-1)
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- - CNS multi-parameter optimization score
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- , , - Key physicochemical descriptors
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- - Predicted pKa
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- - Data source (enamine_real, existing, pubchem)
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## Compute
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