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BrookeZhao94 commited on
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Upload croissant.json

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  1. croissant.json +21 -2
croissant.json CHANGED
@@ -5,6 +5,9 @@
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  "@type": "https://schema.org/Dataset",
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  "https://schema.org/name": "Antibody_Binding_Benchmark_Dataset",
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  "https://schema.org/description": "A benchmark dataset of antibody variants with experimental binding affinity values, structural complex files, and chain-level metadata in JSON format (metadata.json).",
 
 
 
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  "data": [
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  {
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  "name": "binding_affinity_data",
@@ -24,12 +27,21 @@
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  "type": "float",
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  "description": "Measured binding affinity values, either -log(Kd) or log enrichment."
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  }
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- ]
 
 
 
 
 
 
 
 
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  },
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  {
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  "name": "complex_structures",
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  "file": "complex_structure/",
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  "fileSet": true,
 
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  "source": {
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  "url": "https://huggingface.co/datasets/AbBibench/Antibody_Binding_Benchmark_Dataset/tree/main/complex_structure"
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  },
@@ -39,7 +51,14 @@
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  "type": "file",
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  "description": "3D structure file in PDB format for antibody-antigen complexes."
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  }
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- ]
 
 
 
 
 
 
 
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  }
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  ]
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  }
 
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  "@type": "https://schema.org/Dataset",
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  "https://schema.org/name": "Antibody_Binding_Benchmark_Dataset",
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  "https://schema.org/description": "A benchmark dataset of antibody variants with experimental binding affinity values, structural complex files, and chain-level metadata in JSON format (metadata.json).",
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+ "https://schema.org/license": "https://creativecommons.org/licenses/by/4.0/",
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+ "https://schema.org/version": "1.0",
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+ "https://schema.org/citation": "Benchmark for Antibody Binding Affinity Maturation and Design. Xinyan Zhao, Yi-Ching Tang, Akshita Singh, Victor J Cantu, KwanHo An, Junseok Lee, Adam E Stogsdill, Ashwin Kumar Ramesh, Zhiqiang An, Xiaoqian Jiang, Yejin Kim",
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  "data": [
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  {
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  "name": "binding_affinity_data",
 
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  "type": "float",
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  "description": "Measured binding affinity values, either -log(Kd) or log enrichment."
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  }
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+ ],
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+ "recordSet": {
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+ "name": "binding_affinity_records",
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+ "description": "Each record corresponds to a mutated heavy chain sequence with its measured binding score.",
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+ "record": {
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+ "mut_heavy_chain_seq": "{{ mut_heavy_chain_seq }}",
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+ "binding_score": "{{ binding_score }}"
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+ }
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+ }
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  },
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  {
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  "name": "complex_structures",
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  "file": "complex_structure/",
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  "fileSet": true,
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+ "fileType": "pdb",
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  "source": {
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  "url": "https://huggingface.co/datasets/AbBibench/Antibody_Binding_Benchmark_Dataset/tree/main/complex_structure"
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  },
 
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  "type": "file",
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  "description": "3D structure file in PDB format for antibody-antigen complexes."
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  }
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+ ],
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+ "recordSet": {
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+ "name": "complex_structure_records",
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+ "description": "Each record corresponds to one structure file of an antibody-antigen complex.",
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+ "record": {
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+ "structure_file": "{{ structure_file }}"
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+ }
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+ }
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  }
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  ]
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  }