#!/usr/bin/env bash ############################################################################### # StepProbe — Dataset-size ablation for the restoration step. # # Trains a QLoRA restoration adapter at several silver-bullet dataset sizes, # evaluates each on a primary benchmark, then renders fig_paper_6_ablation.pdf. # # Why qwen25-7b + GPTQ w4 and not r1-qwen-7b? # The forest plot shows r1-qwen-7b does NOT respond to restoration on math500 # (ΔAcc ≈ +1 pp, ns) — a flat ablation curve would be a weak paper story. # qwen25-7b + GPTQ on math500 is the cell with the strongest significant # positive response (+5.4 pp, p<.01), so the ablation curve should show a # meaningful upward trend as N grows. Override with env vars if you want # different config. # # Usage: # bash run_ablation.sh # defaults # MODEL_TAG=r1-qwen-1.5b bash run_ablation.sh # override model # SAMPLE_SIZES='25 50 100 200' bash run_ablation.sh # override sweep # # Expected runtime: ~90-120 min on a single 3090 Ti. ############################################################################### set -euo pipefail PROJECT_DIR="$(cd "$(dirname "$0")" && pwd)" cd "$PROJECT_DIR" export CUDA_VISIBLE_DEVICES="${CUDA_VISIBLE_DEVICES:-1}" export HF_HUB_DOWNLOAD_TIMEOUT=300 # ====== Config (override via env) ========================================== MODEL_HF="${MODEL_HF:-Qwen/Qwen2.5-7B-Instruct}" MODEL_TAG="${MODEL_TAG:-qwen25-7b}" QUANT_TAG="${QUANT_TAG:-gptq_w4}" BENCHMARK="${BENCHMARK:-math500}" SAMPLE_SIZES_STR="${SAMPLE_SIZES:-50 100 250 500}" IFS=' ' read -r -a SAMPLE_SIZES <<< "$SAMPLE_SIZES_STR" PY="${PY:-python}" MAX_TOKENS="${MAX_TOKENS:-4096}" # vLLM will OOM if another process (e.g. ollama) is already holding a chunk # of the GPU. 0.55 gives a 7B NF4 model plenty while leaving ~11 GB free for # anything else — override with GPU_MEM=... on GPUs where more is free. GPU_MEM="${GPU_MEM:-0.55}" # ====== Paths ============================================================== ABLATION_ROOT="${PROJECT_DIR}/results/ablation/${MODEL_TAG}_${QUANT_TAG}" DIAG_DIR="${PROJECT_DIR}/results/diagnosis/${QUANT_TAG}/${MODEL_TAG}" REF_DIR="${PROJECT_DIR}/results/segmented/fp16/${MODEL_TAG}" LOG_DIR="${PROJECT_DIR}/logs" TIMESTAMP=$(date +%Y%m%d_%H%M%S) LOG_FILE="${LOG_DIR}/ablation_${TIMESTAMP}.log" mkdir -p "$ABLATION_ROOT" "$LOG_DIR" # ====== Helpers ============================================================ log() { local msg="[$(date '+%H:%M:%S')] $1" echo "$msg" | tee -a "$LOG_FILE" } run_or_skip() { local desc=$1 local skip_check=$2 local cmd=$3 if eval "$skip_check"; then log "SKIP: $desc" else log "RUN: $desc" eval "$cmd" 2>&1 | tee -a "$LOG_FILE" fi } # ====== Preflight ========================================================== log "==============================================" log "StepProbe restoration ablation" log " Model: $MODEL_HF ($MODEL_TAG)" log " Quant: $QUANT_TAG" log " Benchmark: $BENCHMARK" log " Sample Ns: ${SAMPLE_SIZES[*]}" log " Output: $ABLATION_ROOT" log " Log: $LOG_FILE" log "==============================================" # Prerequisites: need diagnosis + FP16 reference segmentation for this config. if [[ ! -d "$DIAG_DIR" ]]; then log "ERROR: missing diagnosis dir: $DIAG_DIR" log " run 'bash run_all.sh --phase 5' to generate it first" exit 1 fi if [[ ! -d "$REF_DIR" ]]; then log "ERROR: missing FP16 reference segmentation: $REF_DIR" log " run 'bash run_all.sh --phase 4' to generate it first" exit 1 fi # ====== Main sweep ========================================================= for N in "${SAMPLE_SIZES[@]}"; do log "" log "==============================================" log "Ablation N=$N" log "==============================================" CFG_DIR="${ABLATION_ROOT}/n${N}" ADAPTER="${CFG_DIR}/qlora/adapter" MERGED="${CFG_DIR}/qlora/merged_fp16" INF_DIR="${CFG_DIR}/inference" OUT_FILE="${INF_DIR}/${BENCHMARK}_run0.jsonl" # --- 1. Restoration training -------------------------------------------- run_or_skip "QLoRA restoration (N=$N)" \ "[[ -f '${ADAPTER}/adapter_model.safetensors' ]]" \ "$PY -m stepprobe.restore \ --model '$MODEL_HF' \ --diagnosis '$DIAG_DIR' \ --ref '$REF_DIR' \ --output '$CFG_DIR' \ --method qlora \ --max-samples $N \ --epochs 3 \ --lr 2e-4 \ --batch-size 4" # --- 2. Merge + inference (skip entirely if inference output already exists) ---- if [[ -f "$OUT_FILE" ]]; then log "SKIP: vLLM inference on $BENCHMARK (N=$N) — $OUT_FILE exists" else run_or_skip "Merge adapter → FP16 (N=$N)" \ "[[ -f '${MERGED}/config.json' ]]" \ "$PY ${PROJECT_DIR}/scripts/merge_adapter.py \ --model '$MODEL_HF' \ --adapter '$ADAPTER' \ --output '$MERGED'" $PY -c "import torch; torch.cuda.empty_cache() if torch.cuda.is_available() else None" 2>&1 | tee -a "$LOG_FILE" run_or_skip "vLLM inference on $BENCHMARK (N=$N)" \ "[[ -f '$OUT_FILE' ]]" \ "$PY ${PROJECT_DIR}/scripts/run_inference.py \ --model '$MERGED' \ --quant bnb_nf4 \ --bits 4 \ --benchmark $BENCHMARK \ --output '$INF_DIR' \ --max-tokens $MAX_TOKENS \ --num-runs 1 \ --gpu-memory-utilization $GPU_MEM" fi # --- 4. Segmentation + diagnosis on this ablation config --------------- SEG_DIR="${CFG_DIR}/segmented" DIAG_OUT="${CFG_DIR}/diagnosis" run_or_skip "Segment (N=$N)" \ "[[ -f '${SEG_DIR}/${BENCHMARK}_run0.jsonl' ]]" \ "$PY -m stepprobe.segment --input '$INF_DIR' --output '$SEG_DIR' --quant '${QUANT_TAG}_ablation_n${N}'" run_or_skip "Diagnose vs FP16 (N=$N)" \ "[[ -f '${DIAG_OUT}/${BENCHMARK}_run0.jsonl' ]]" \ "$PY -m stepprobe.diagnose --ref '$REF_DIR' --hyp '$SEG_DIR' --output '$DIAG_OUT' --alignment dtw" # --- 5. Free disk (merged FP16 is ~14 GB for a 7B model) --------------- if [[ -d "$MERGED" ]]; then log "Cleaning up merged FP16 dir: $MERGED" rm -rf "$MERGED" fi $PY -c "import torch; torch.cuda.empty_cache() if torch.cuda.is_available() else None" 2>&1 | tee -a "$LOG_FILE" done # ====== Build the ablation figure ========================================= log "" log "==============================================" log "Rendering fig_paper_6_ablation.pdf" log "==============================================" $PY ${PROJECT_DIR}/scripts/make_ablation_figure.py \ --ablation-root "$ABLATION_ROOT" \ --model "$MODEL_TAG" \ --quant "$QUANT_TAG" \ --benchmark "$BENCHMARK" \ --metrics "${PROJECT_DIR}/results/metrics" \ --output "${PROJECT_DIR}/figures/paper/fig_paper_6_ablation.pdf" 2>&1 | tee -a "$LOG_FILE" log "" log "==============================================" log "DONE" log " Figure: figures/paper/fig_paper_6_ablation.pdf" log " Log: $LOG_FILE" log "=============================================="