Datasets:
| #!/usr/bin/env python | |
| from nipype import freesurfer as fs | |
| # Convert the joint fusion labels | |
| rs = fs.Resample() | |
| rs.inputs.in_file = 'OASIS-TRT-20_jointfusion_DKT31_CMA_labels_in_MNI152_v2.nii.gz' | |
| rs.inputs.resampled_file = 'OASIS-TRT-20_jointfusion_DKT31_CMA_labels_in_MNI152_2mm_v2.nii.gz' | |
| rs.inputs.voxel_size = (2,2,2) | |
| rs.inputs.args = '-rt nearest -ns 1' | |
| rs.run() | |
| # Convert the template | |
| rs = fs.Resample() | |
| rs.inputs.in_file = 'OASIS-30_Atropos_template_in_MNI152.nii.gz' | |
| rs.inputs.resampled_file = 'OASIS-30_Atropos_template_in_MNI152_2mm.nii.gz' | |
| rs.inputs.voxel_size = (2,2,2) | |
| rs.inputs.args = '-rt cubic' | |
| rs.run() | |