from __future__ import annotations import gzip,pickle,json,re,csv,math,time,heapq,glob,os from pathlib import Path from collections import Counter,defaultdict from multiprocessing import Pool, get_context import numpy as np ROOT=Path('/mnt/data'); WORK=ROOT/'msmarco_scale_work'; OUT=WORK/'baselines'; OUT.mkdir(exist_ok=True) N=8_841_823; TOPK=1000 # Same token boundary as frozen system / sklearn token_pattern for query terms. TOKEN_RE=re.compile(r'(?u)\b\w\w+\b') # Load qids and query texts qrels_rows=[]; qids=set() with open(ROOT/'test.tsv',newline='') as f: r=csv.DictReader(f,delimiter='\t') for x in r: q=str(x['query-id']); d=int(x['corpus-id']); rel=float(x['score']); qids.add(q); qrels_rows.append((q,d,rel)) qids=sorted(qids,key=lambda x:int(x)); qindex={q:i for i,q in enumerate(qids)} texts={} with open(ROOT/'queries.jsonl') as f: for line in f: o=json.loads(line); q=str(o['_id']) if q in qids: texts[q]=o['text'] assert len(texts)==len(qids)==43 qtoks={q:TOKEN_RE.findall(texts[q].lower()) for q in qids} allterms=sorted(set(t for z in qtoks.values() for t in z)) # full-corpus known df from the exact 50k vocabulary build with gzip.open(WORK/'final_vocab_50k.pkl.gz','rb') as f:z=pickle.load(f) terms50=z['terms'].tolist(); df50=np.asarray(z['df']); term2df={t:int(df50[i]) for i,t in enumerate(terms50)} oov=sorted(t for t in allterms if t not in term2df) print('queries',len(qids),'query terms',len(allterms),'oov',oov,flush=True) # locate 36 shards in order def shard_path(i): hits=list(ROOT.glob(f'corpus_{i:04d}.jsonl*.gz')) if i==35 and len(hits)==0: hits=list((ROOT/'restored').glob(f'corpus_{i:04d}.jsonl*.gz')) assert len(hits)==1,(i,hits) return str(hits[0]) SHARDS=[shard_path(i) for i in range(36)] # Exact OOV df with one cheap corpus scan, only 10 rare strings. OOV_PAT=re.compile(r'(?u)\b(?:'+'|'.join(re.escape(t) for t in sorted(oov,key=len,reverse=True))+r')\b') if oov else None def count_oov_one(args): sid,path=args; c=Counter(); n=0; t0=time.time() with gzip.open(path,'rt',encoding='utf-8') as f: for line in f: o=json.loads(line); tx=((o.get('title') or '')+' '+(o.get('text') or '')).lower(); n+=1 if OOV_PAT: m=set(OOV_PAT.findall(tx)) for t in m:c[t]+=1 return sid,n,dict(c),time.time()-t0 if oov: t0=time.time(); with get_context('fork').Pool(processes=8) as p: rr=p.map(count_oov_one,list(enumerate(SHARDS))) oo=Counter(); for sid,n,c,sec in rr: oo.update(c) for t in oov: term2df[t]=int(oo[t]) print('oov df',dict(oo),'sec',time.time()-t0,flush=True) # Robertson BM25 idf; base parameters match common Anserini MS MARCO defaults. def make_idf(): return {t:math.log(1.0+(N-term2df[t]+0.5)/(term2df[t]+0.5)) for t in allterms} idf=make_idf() # Query term multiplicity mapping term -> [(query index,multiplicity)] t2q=defaultdict(list) for q in qids: c=Counter(qtoks[q]) for t,m in c.items(): t2q[t].append((qindex[q],m)) # compiled union matcher exact same word boundaries, avoids tokenizing irrelevant words PAT=re.compile(r'(?u)\b(?:'+'|'.join(re.escape(t) for t in sorted(allterms,key=len,reverse=True))+r')\b') avgdl=float(json.load(open(WORK/'full_index/meta.json'))['avg_doc_length']) # existing exact tokenizer document lengths DL_PATH=str(WORK/'full_index/doc_lengths.u16') # Each shard returns top1000 per q. Global top1000 is exactly merge of shard top1000. def score_shard(args): sid,path,k1,b=args dlarr=np.memmap(DL_PATH,dtype=np.uint16,mode='r',shape=(N,)) heaps=[[] for _ in qids] n=0; matched=0; t0=time.time() with gzip.open(path,'rt',encoding='utf-8') as f: for line in f: o=json.loads(line); d=int(o['_id']); tx=((o.get('title') or '')+' '+(o.get('text') or '')).lower(); n+=1 mm=PAT.findall(tx) if not mm: continue matched+=1; tf=Counter(mm); norm=k1*(1.0-b+b*(float(dlarr[d])/avgdl)) qs={} for term,freq in tf.items(): w=idf[term]*((freq*(k1+1.0))/(freq+norm)) for qi,qm in t2q[term]: qs[qi]=qs.get(qi,0.0)+w*qm for qi,sc in qs.items(): h=heaps[qi]; item=(float(sc),-d) # lower docid wins exact tie if len(h)h[0]: heapq.heapreplace(h,item) return sid,heaps,n,matched,time.time()-t0 def retrieve(k1,b,label): t0=time.time() with get_context('fork').Pool(processes=8) as p: rr=p.map(score_shard,[(i,SHARDS[i],k1,b) for i in range(36)]) globalh=[[] for _ in qids] for sid,heaps,n,matched,sec in rr: for qi,h in enumerate(heaps): gh=globalh[qi] for item in h: if len(gh)gh[0]: heapq.heapreplace(gh,item) run={} for qi,q in enumerate(qids): arr=sorted(globalh[qi],reverse=True); run[q]=[-negd for sc,negd in arr] sec=time.time()-t0 print(label,'retrieval scan sec',sec,flush=True) return run,sec # TREC-compliant eval: passage level 1 = related/not relevant for binary metrics. nDCG remains graded. qrels=defaultdict(dict) for q,d,r in qrels_rows:qrels[q][d]=r def evaluate(run): vals=defaultdict(list) for q in qids: qr=qrels[q]; rank=run.get(q,[]) binary={d for d,r in qr.items() if r>=2.0}; den=max(1,len(binary)) h10=sum(d in binary for d in rank[:10]); h100=sum(d in binary for d in rank[:100]) vals['P@10'].append(h10/10); vals['R@10'].append(h10/den); vals['R@100'].append(h100/den); vals['Hit@10'].append(float(h10>0)); vals['Hit@100'].append(float(h100>0)) rr=0.0 for i,d in enumerate(rank[:10],1): if d in binary: rr=1.0/i;break vals['MRR@10'].append(rr) obs=[qr.get(d,0.0) for d in rank[:10]]; ideal=sorted(qr.values(),reverse=True)[:10] dcg=sum(r/math.log2(i+2) for i,r in enumerate(obs)); idcg=sum(r/math.log2(i+2) for i,r in enumerate(ideal)); vals['nDCG@10'].append(dcg/idcg if idcg else 0.0) return {k:float(np.mean(v)) for k,v in vals.items()} | {'n_queries':len(qids),'n_binary_relevant':sum(r>=2 for _,_,r in qrels_rows)} if __name__=='__main__': # Common MS MARCO/Anserini-like BM25 and a conventional default variant for sensitivity. out={'tokenizer':'lowercase regex (?u)\\b\\w\\w+\\b; no stemming','N':N,'avgdl':avgdl,'oov_df':{t:term2df[t] for t in oov}} for k1,b,label in [(0.9,0.4,'bm25_k1_0.9_b_0.4'),(1.2,0.75,'bm25_k1_1.2_b_0.75')]: run,sec=retrieve(k1,b,label); met=evaluate(run); out[label]={'k1':k1,'b':b,'metrics':met,'full_corpus_parallel_scan_seconds':sec,'run_top1000':run}; print(label,met,flush=True) json.dump(out,open(OUT/'bm25_local_test.json','w'),indent=2) print('SAVED',OUT/'bm25_local_test.json',flush=True)