Sampade07 commited on
Commit
c55dc6e
·
verified ·
1 Parent(s): db48c0c

Create README.md

Browse files
Files changed (1) hide show
  1. README.md +66 -0
README.md ADDED
@@ -0,0 +1,66 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ ---
2
+ license: cc-by-4.0
3
+ task_categories:
4
+ - tabular-classification
5
+ - regression
6
+ tags:
7
+ - medical
8
+ - oncology
9
+ - synthetic-data
10
+ - genomics
11
+ - ehr
12
+ - nsclc
13
+ - bioinformatics
14
+ pretty_name: ANODE Synthetic Oncology & Genomics
15
+ ---
16
+
17
+ # ANODE: Synthetic NSCLC EHR & Genomics Dataset
18
+
19
+ ## Title: ANODE-OncoGen High-Fidelity Synthetic Records
20
+
21
+ This dataset consists of a high-density `.jsonl` collection of synthetic patient records for Non-Small Cell Lung Cancer (NSCLC), integrating clinical history with deep genomic markers.
22
+
23
+
24
+
25
+ ### 📋 Full Feature Specifications
26
+ The dataset includes the following features for every patient record:
27
+
28
+ #### 1. Administrative & Metadata
29
+ * **patient_id**: Unique identifier for the synthetic patient (e.g., `ANODE_551499`).
30
+ * **record_id**: Unique identifier for the specific clinical event.
31
+ * **record_generation_timestamp**: ISO 8601 timestamp of data simulation.
32
+ * **synthetic_source**: Versioning information for the Grok-4 high-fidelity simulator.
33
+
34
+ #### 2. Clinical Demographics
35
+ * **age_at_diagnosis**: Patient age in years.
36
+ * **sex**: Biological sex (male/female).
37
+ * **smoking_pack_years**: Quantitative history of tobacco use.
38
+ * **ecog_performance_status**: Functional status score (0–4) indicating the patient's level of self-care.
39
+
40
+ #### 3. Oncology & Histology
41
+ * **cancer_type**: Specific malignancy (Non-small cell lung cancer).
42
+ * **histology**: Cellular classification (e.g., Adenocarcinoma, Squamous cell carcinoma).
43
+ * **stage_at_diagnosis**: Disease progression stage (e.g., IVA, IVB).
44
+ * **primary_tumor_size_cm**: Diameter of the primary lesion in centimeters.
45
+ * **metastatic_sites_count**: Numerical count of secondary tumor locations.
46
+
47
+
48
+
49
+ #### 4. Genomic & Biomarker Profile
50
+ * **driver_mutation**: Identified genetic drivers (e.g., ALK fusion, EGFR, KRAS, BRAF, or None).
51
+ * **pd_l1_tps_percent**: Tumor Proportion Score for PD-L1 expression (0–100%).
52
+ * **tmb_mutations_per_mb**: Tumor Mutational Burden measured in mutations per megabase.
53
+ * **msi_status**: Microsatellite instability status (e.g., MSS).
54
+
55
+ #### 5. Treatment & Survival Outcomes
56
+ * **first_line_regimen**: Initial therapy used (e.g., carboplatin + paclitaxel + pembrolizumab).
57
+ * **overall_survival_months**: Time elapsed from diagnosis to death or last follow-up.
58
+ * **censored**: Boolean flag (true/false) indicating if the patient was still alive at the end of the simulation period.
59
+
60
+
61
+
62
+ ### 📂 Technical Format
63
+ * **File Extension**: `.jsonl` (JSON Lines)
64
+ * **Encoding**: UTF-8
65
+ * **Schema Consistency**: Strict key-value pairing across all entries for programmatic parsing.
66
+ *