#!/usr/bin/env python3 """ build_mixed_dataset.py — Four-source mixed pre-training corpus builder. Sources ------- SLTrans local parquet (balanced language x IR-type) --sltrans-tokens peS2o allenai/peS2o (open scientific papers) --pes2o-tokens TheStack bigcode/the-stack (permissively licensed code) --stack-tokens OpenWebMath open-web-math/open-web-math (math web text) --owm-tokens Set any cap to 0 to skip that source. Output ------ JSONL shards under --output-dir, one filename prefix per source: sltrans-00000.jsonl, pes2o-00000.jsonl, the_stack-00000.jsonl, ... Each record: {"text": "...", "source": "...", "meta": {...}, "est_tokens": N} Plus manifest.json summarising the run. Usage ----- pip install "datasets>=2.18" pyarrow pandas tqdm huggingface-cli login # peS2o and the-stack are gated python build_mixed_dataset.py python build_mixed_dataset.py --sltrans-tokens 500e6 --owm-tokens 200e6 python build_mixed_dataset.py --stack-tokens 0 # skip TheStack python build_mixed_dataset.py --stack-langs python,rust,go """ from __future__ import annotations import argparse import json import random import re import socket import sys import time from concurrent.futures import ThreadPoolExecutor from pathlib import Path import pandas as pd import pyarrow.parquet as pq from tqdm import tqdm socket.setdefaulttimeout(90) # ── constants ────────────────────────────────────────────────────────────────── SLTRANS_PROBE_ROWS = 200 SLTRANS_SKIP_DIRS = {".venv", "__pycache__", ".git"} THE_STACK_LANGS = [ "python", "c", "cpp", "rust", "go", "java", "javascript", "typescript", ] _TRANSIENT_ERRORS = ("ssl", "timeout", "handshake", "connection", "timed out") # ── token estimation ─────────────────────────────────────────────────────────── def estimate_tokens(text: str) -> int: return int(len(text.split()) * 1.5) # ── JSONL shard writer ───────────────────────────────────────────────────────── class ShardWriter: def __init__(self, out_dir: Path, prefix: str, records_per_shard: int): out_dir.mkdir(parents=True, exist_ok=True) self._dir, self._pfx, self._rps = out_dir, prefix, records_per_shard self._idx = self._n = 0 self._fh = None self._roll() def _roll(self): if self._fh: self._fh.close() self._fh = (self._dir / f"{self._pfx}-{self._idx:05d}.jsonl").open("w", encoding="utf-8") self._n = 0 self._idx += 1 def write(self, record: dict): self._fh.write(json.dumps(record, ensure_ascii=False) + "\n") self._n += 1 if self._n >= self._rps: self._roll() def close(self): if self._fh: self._fh.close() self._fh = None # ── SLTrans (local parquet) ──────────────────────────────────────────────────── def _sltrans_find_groups(root: Path) -> dict[tuple[str, str], list[Path]]: """Return {(language, ir_type): [sorted shard paths]}.""" groups: dict[tuple[str, str], list[Path]] = {} for d in sorted(root.iterdir()): if not d.is_dir() or d.name in SLTRANS_SKIP_DIRS: continue for f in sorted(d.glob("*.parquet")): m = re.match(r"^(Perf_Optimized|Size_Optimized)", f.name) if m: groups.setdefault((d.name, m.group(1)), []).append(f) return groups def _pq_nrows(files: list[Path]) -> int: return sum(pq.ParquetFile(f).metadata.num_rows for f in files) def _est_tok_df(src: pd.Series, ir: pd.Series) -> pd.Series: src_w = src.fillna("").str.split().str.len().fillna(0) ir_w = ir.fillna("").str.split().str.len().fillna(0) return ((src_w + ir_w + 5) * 1.5).astype(int) def _probe_avg_tokens(files: list[Path], n: int, rng: random.Random) -> float: frames = [] seed = rng.randint(0, 2**31) for f in files: df = pq.ParquetFile(f).read_row_group(0).to_pandas() if not df.empty: frames.append(df.sample(min(n, len(df)), random_state=seed)) if sum(len(x) for x in frames) >= n: break if not frames: return 0.0 p = pd.concat(frames, ignore_index=True).head(n) p = p.dropna(subset=["Source_Code", "IR_Original"]) p = p[(p["Source_Code"] != "") & (p["IR_Original"] != "")] return float(_est_tok_df(p["Source_Code"], p["IR_Original"]).mean()) if len(p) else 0.0 def _sltrans_allocate( groups: dict[tuple[str, str], list[Path]], total: int, rng: random.Random, ) -> dict[tuple[str, str], int]: """Equal-share budget with deficit redistribution for small groups.""" keys = sorted(groups) avail: dict[tuple[str, str], int] = {} for k in tqdm(keys, desc=" probe", unit="grp", leave=False): rows = _pq_nrows(groups[k]) avg = _probe_avg_tokens(groups[k], SLTRANS_PROBE_ROWS, rng) avail[k] = int(rows * avg) tqdm.write( f" {k[0]:>15}/{k[1]:<16} ~{avail[k]:>14,} tok" f" ({rows:,} rows, avg {avg:.0f})" ) budgets = {k: total // len(keys) for k in keys} for _ in range(len(keys)): capped = {k: min(budgets[k], avail[k]) for k in keys} deficit = sum(budgets[k] - capped[k] for k in keys) if not deficit: break room = [k for k in keys if capped[k] < avail[k]] if not room: break bonus = deficit // len(room) for k in room: capped[k] = min(capped[k] + bonus, avail[k]) budgets = capped return budgets def write_sltrans( root: Path, budget: int, writer: ShardWriter, rng: random.Random, min_tokens: int, ) -> int: groups = _sltrans_find_groups(root) if not groups: print(f" WARNING: no SLTrans parquet files found in {root}", file=sys.stderr) return 0 budgets = _sltrans_allocate(groups, budget, rng) total_written = 0 bar = tqdm(total=budget, unit="tok", unit_scale=True, desc=" write", dynamic_ncols=True) for (lang, ir_type) in sorted(groups): g_budget = budgets[(lang, ir_type)] g_written = 0 files = list(groups[(lang, ir_type)]) rng.shuffle(files) for f in files: if g_written >= g_budget: break pf = pq.ParquetFile(f) for gi in range(pf.num_row_groups): if g_written >= g_budget: break df = pf.read_row_group(gi).to_pandas() df = df.dropna(subset=["Source_Code", "IR_Original"]) df = df[(df["Source_Code"] != "") & (df["IR_Original"] != "")] if df.empty: continue df = df.sample(frac=1, random_state=rng.randint(0, 2**31)).reset_index(drop=True) df["_t"] = _est_tok_df(df["Source_Code"], df["IR_Original"]) remaining = g_budget - g_written cutoff = max(int((df["_t"].cumsum() <= remaining).sum()), 1) for row in df.iloc[:cutoff].to_dict("records"): toks = int(row["_t"]) if toks < min_tokens: continue text = ( f"\n{row['Source_Code']}\n\n" f"\n{row['IR_Original']}\n" ) writer.write({ "text": text, "source": "sltrans", "meta": {"language": lang, "ir_type": ir_type}, "est_tokens": toks, }) g_written += toks total_written += toks bar.update(min(toks, budget - bar.n)) bar.close() return total_written # ── HuggingFace streaming ────────────────────────────────────────────────────── def _hf_open( hf_path: str, split: str = "train", hf_config: str | None = None, data_dir: str | None = None, ): """Open one HF streaming dataset with exponential-backoff retry.""" from datasets import load_dataset kw: dict = {"split": split, "streaming": True} if hf_config: kw["name"] = hf_config if data_dir: kw["data_dir"] = data_dir for attempt in range(5): try: return load_dataset(hf_path, **kw) except ValueError as e: if "Bad split" in str(e): return None raise except Exception as e: if attempt < 4 and any(k in str(e).lower() for k in _TRANSIENT_ERRORS): time.sleep(2 ** attempt) continue raise return None def _hf_iter( hf_path: str, split: str = "train", hf_config: str | None = None, subsets: list[str] | None = None, ): """ Yield rows from a HuggingFace streaming dataset. For TheStack, pass subsets; streams are resolved in parallel and interleaved. """ if not subsets: ds = _hf_open(hf_path, split=split, hf_config=hf_config) if ds is not None: yield from ds return # Resolve subset streams in parallel (each resolution is an HTTP round-trip). def _open_sub(sub: str): return _hf_open(hf_path, split=split, data_dir=f"data/{sub}") with ThreadPoolExecutor(max_workers=min(4, len(subsets))) as pool: streams = [s for s in pool.map(_open_sub, subsets) if s is not None] if streams: from datasets import interleave_datasets yield from interleave_datasets(streams, stopping_strategy="all_exhausted") def write_hf_source( source_name: str, budget: int, writer: ShardWriter, rng: random.Random, min_tokens: int, hf_path: str, text_fn, meta_fn, hf_config: str | None = None, split: str = "train", subsets: list[str] | None = None, ) -> int: written = skipped = 0 bar = tqdm(total=budget, unit="tok", unit_scale=True, desc=f" {source_name:<12}", dynamic_ncols=True, smoothing=0.05) try: for row in _hf_iter(hf_path, split=split, hf_config=hf_config, subsets=subsets): text = text_fn(row) if not text: skipped += 1 continue toks = estimate_tokens(text) if toks < min_tokens: skipped += 1 continue writer.write({ "text": text, "source": source_name, "meta": meta_fn(row), "est_tokens": toks, }) written += toks bar.update(min(toks, budget - bar.n)) if written >= budget: break finally: bar.close() print(f" done: {written:,} tokens written, {skipped:,} rows skipped") return written # ── text / meta extractors ───────────────────────────────────────────────────── def _get(row: dict, *keys: str, default: str = "") -> str: for k in keys: v = row.get(k) if v: return str(v) return default def pes2o_text(row): return _get(row, "text", "content") def pes2o_meta(row): return {"id": _get(row, "id", "doc_id"), "source": _get(row, "source", "venue")} def stack_text(row): return _get(row, "content", "text", "code") def stack_meta(row): return { "lang": _get(row, "lang", "language"), "repo": _get(row, "max_stars_repo_name", "repo_name"), "license": _get(row, "license"), } def owm_text(row): return _get(row, "text") def owm_meta(row): return {"url": _get(row, "url")} # ── main ─────────────────────────────────────────────────────────────────────── def main() -> None: ap = argparse.ArgumentParser( description=__doc__, formatter_class=argparse.RawDescriptionHelpFormatter, ) ap.add_argument("--sltrans-root", default=".", help="Root dir of downloaded SLTrans parquet files (default: .)") ap.add_argument("--sltrans-tokens", type=float, default=700_000_000, help="Token cap for SLTrans (default: 700M, 0=skip)") ap.add_argument("--pes2o-tokens", type=float, default=150_000_000, help="Token cap for peS2o (default: 150M, 0=skip)") ap.add_argument("--stack-tokens", type=float, default=100_000_000, help="Token cap for TheStack (default: 100M, 0=skip)") ap.add_argument("--owm-tokens", type=float, default=50_000_000, help="Token cap for OpenWebMath (default: 50M, 0=skip)") ap.add_argument("--stack-langs", default=",".join(THE_STACK_LANGS), help="Comma-separated TheStack language subsets") ap.add_argument("--output-dir", default="./mixed_pretrain", help="Output directory for JSONL shards (default: ./mixed_pretrain)") ap.add_argument("--shard-size", type=int, default=50_000, help="Records per JSONL shard (default: 50000)") ap.add_argument("--min-tokens", type=int, default=32, help="Drop records shorter than this (est. tokens, default: 32)") ap.add_argument("--seed", type=int, default=42) args = ap.parse_args() rng = random.Random(args.seed) out_dir = Path(args.output_dir) stack_langs = [s.strip() for s in args.stack_langs.split(",") if s.strip()] budgets = { "sltrans": int(args.sltrans_tokens), "pes2o": int(args.pes2o_tokens), "the_stack": int(args.stack_tokens), "openwebmath": int(args.owm_tokens), } active_sources = [name for name, tok in budgets.items() if tok > 0] total_budget = sum(budgets.values()) print("=" * 64) print("Mixed pre-training dataset builder") print(f" Output : {out_dir.resolve()}") print(f" Seed : {args.seed}") print() for name, toks in budgets.items(): if toks > 0: print(f" {name:<14} {toks:>15,} tokens") else: print(f" {name:<14} (skipped)") print(f" {'TOTAL':<14} {total_budget:>15,} tokens") print("=" * 64) summary: dict[str, int] = {} n_active = len(active_sources) step = 1 # ── SLTrans ──────────────────────────────────────────────────────────────── if budgets["sltrans"] > 0: print(f"\n[{step}/{n_active}] SLTrans (local parquet, balanced language x IR-type)") step += 1 w = ShardWriter(out_dir, "sltrans", args.shard_size) try: summary["sltrans"] = write_sltrans( Path(args.sltrans_root), budgets["sltrans"], w, rng, args.min_tokens, ) finally: w.close() # ── peS2o ────────────────────────────────────────────────────────────────── if budgets["pes2o"] > 0: print(f"\n[{step}/{n_active}] peS2o (allenai/peS2o, config=v2)") step += 1 w = ShardWriter(out_dir, "pes2o", args.shard_size) try: summary["pes2o"] = write_hf_source( "pes2o", budgets["pes2o"], w, rng, args.min_tokens, hf_path="allenai/peS2o", text_fn=pes2o_text, meta_fn=pes2o_meta, hf_config="v2", ) finally: w.close() # ── TheStack ─────────────────────────────────────────────────────────────── if budgets["the_stack"] > 0: print(f"\n[{step}/{n_active}] TheStack (bigcode/the-stack, {len(stack_langs)} language subsets)") print(f" langs: {', '.join(stack_langs)}") step += 1 w = ShardWriter(out_dir, "the_stack", args.shard_size) try: summary["the_stack"] = write_hf_source( "the_stack", budgets["the_stack"], w, rng, args.min_tokens, hf_path="bigcode/the-stack", text_fn=stack_text, meta_fn=stack_meta, subsets=stack_langs, ) finally: w.close() # ── OpenWebMath ──────────────────────────────────────────────────────────── if budgets["openwebmath"] > 0: print(f"\n[{step}/{n_active}] OpenWebMath (open-web-math/open-web-math)") w = ShardWriter(out_dir, "openwebmath", args.shard_size) try: summary["openwebmath"] = write_hf_source( "openwebmath", budgets["openwebmath"], w, rng, args.min_tokens, hf_path="open-web-math/open-web-math", text_fn=owm_text, meta_fn=owm_meta, ) finally: w.close() # ── manifest ─────────────────────────────────────────────────────────────── manifest = { "seed": args.seed, "min_tokens_per_record": args.min_tokens, "sources": { "sltrans": {"root": args.sltrans_root, "target_tokens": budgets["sltrans"]}, "pes2o": {"hf_path": "allenai/peS2o", "target_tokens": budgets["pes2o"]}, "the_stack": {"hf_path": "bigcode/the-stack", "target_tokens": budgets["the_stack"], "langs": stack_langs}, "openwebmath": {"hf_path": "open-web-math/open-web-math", "target_tokens": budgets["openwebmath"]}, }, "tokens_written": summary, } (out_dir / "manifest.json").write_text(json.dumps(manifest, indent=2)) # ── summary ──────────────────────────────────────────────────────────────── grand = sum(summary.values()) print("\n" + "=" * 62) print(f"{'Source':<14} {'Target':>15} {'Written':>15} {'Share':>6}") print("-" * 58) for name in ["sltrans", "pes2o", "the_stack", "openwebmath"]: if budgets[name] == 0: continue written = summary.get(name, 0) pct = 100 * written / grand if grand else 0 print(f"{name:<14} {budgets[name]:>15,} {written:>15,} {pct:>5.1f}%") print("-" * 58) print(f"{'TOTAL':<14} {total_budget:>15,} {grand:>15,} 100.0%") print(f"\nOutput: {out_dir.resolve()}") if __name__ == "__main__": main()