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r"""
model.py — AtmosIQ V1, faithful to MODEL_BLUEPRINT v1.1 + Architecture v1.1 FROZEN.
Custom modules: PhysicsBiasedGAT (ADR-014 Am.1 + ADR-019), LogStudentTHead (ADR-015).
No torch_scatter / PyG (pin 4b: hand-rolled segment softmax IS the spec).
Feature contract (F_total=54, four groups, NEVER merged pre-embed):
A satellite 18 -> 32 B meteorology 12 -> 24 C static 13 -> 16 D calendar 11 -> 16
fusion Linear(88 -> 96). Per-group [MASK] tokens (SSL + cloud-blindness).
Encoder: spatial PhysicsBiasedGAT xL=2 BEFORE temporal Transformer (T=7), last-step pool.
Head input = [N, 96+1] (window-completeness scalar). Output [N, horizons=4, P=7, 3].
SSL recon reads PRE-POOL [N,T,96] per timestep -> 29 continuous channels (discarded after pretrain).
"""
from __future__ import annotations
import torch, torch.nn as nn, torch.nn.functional as F
# ------------------------------------------------------------------ physics bias
def phys_log_bias(w_u1330, w_v1330, blh, src, e_hat, n_hat, eps=1e-4, f_min=0.05):
"""Architecture v1.5: g_ij = relu(w_i,1330 . u_hat_ij) * f(BLH), f in (f_min,1].
sigma(lambda)=0 baseline -> returns log(g_ij + eps) exactly (ADR-014 Am.1)."""
w_along = w_u1330[src]*e_hat + w_v1330[src]*n_hat # directed: e_ij != e_ji
f = f_min + (1.0 - f_min)*torch.sigmoid((blh[src]-500.0)/500.0) # strictly in (f_min,1]
g = F.relu(w_along) * f
return torch.log(g + eps)
# ------------------------------------------------------------- PhysicsBiasedGAT (BLUEPRINT §4 verbatim)
class PhysicsBiasedGAT(nn.Module):
def __init__(self, d_model, n_heads):
super().__init__()
self.h, self.dh = n_heads, d_model // n_heads
self.W = nn.Linear(d_model, d_model, bias=False)
self.a_src = nn.Parameter(torch.empty(n_heads, self.dh))
self.a_dst = nn.Parameter(torch.empty(n_heads, self.dh))
self.self_bias = nn.Parameter(torch.zeros(n_heads)) # learned per-head self term
self.out = nn.Linear(d_model, d_model)
nn.init.xavier_uniform_(self.a_src); nn.init.xavier_uniform_(self.a_dst)
def forward(self, x, edge_index, phys_log_bias, return_attn=False):
N = x.size(0)
Wx = self.W(x).view(N, self.h, self.dh)
src, dst = edge_index[0], edge_index[1]
e = (Wx[src]*self.a_src).sum(-1) + (Wx[dst]*self.a_dst).sum(-1)
e = F.leaky_relu(e, 0.2) + phys_log_bias.unsqueeze(-1) # [E,h]
e_self = F.leaky_relu((Wx*self.a_src).sum(-1) + (Wx*self.a_dst).sum(-1), 0.2)
e_self = e_self + self.self_bias # [N,h] learned self term
m = e_self.clone()
m = m.index_reduce_(0, dst, e, reduce="amax", include_self=True)
ex = torch.exp(e - m[dst]); ex_self = torch.exp(e_self - m)
denom = ex_self.clone(); denom.index_add_(0, dst, ex)
alpha = ex / denom[dst]; alpha_self = ex_self / denom
out = alpha_self.unsqueeze(-1) * Wx
out.index_add_(0, dst, alpha.unsqueeze(-1) * Wx[src])
out = self.out(out.reshape(N, self.h*self.dh))
if return_attn:
return out, {"alpha_self": alpha_self, "alpha_edge": alpha, "edge_index": edge_index}
return out
# ------------------------------------------------------------- group assembly + [MASK]
class GroupAssembler(nn.Module):
"""Four sub-embedders + categorical embeddings (land_use->4, grap->3) -> fusion.
Per-group learned [MASK] tokens (SSL + cloud-blindness)."""
def __init__(self, dims, sub, cat, d_model):
super().__init__()
self.sub = sub
self.emb_sat = nn.Linear(dims["satellite"], sub["satellite"])
self.emb_met = nn.Linear(dims["meteorology"], sub["meteorology"])
self.emb_static = nn.Linear(dims["static"], sub["static"]) # 13 = 9 numeric + 4 landuse-emb
self.emb_cal = nn.Linear(dims["calendar"], sub["calendar"]) # 11 = 8 numeric + 3 grap-emb
self.landuse = nn.Embedding(cat.get("n_landuse",11), cat.get("land_use_class",4))
self.grap = nn.Embedding(cat.get("n_grap",5), cat.get("grap_stage",3))
self.fusion = nn.Linear(sum(sub.values()), d_model)
self.mask_tok = nn.ParameterDict({g: nn.Parameter(torch.zeros(sub[g]))
for g in ["satellite","meteorology","static","calendar"]})
def forward(self, g, group_mask=None):
"""g keys: satellite[N,18], meteorology[N,12], static_num[N,9], landuse[N] long,
calendar_num[N,8], grap[N] long. group_mask: dict grp->[N] (1=mask)."""
static = torch.cat([g["static_num"], self.landuse(g["landuse"])], -1) # [N,13]
cal = torch.cat([g["calendar_num"], self.grap(g["grap"])], -1) # [N,11]
h = {"satellite": self.emb_sat(g["satellite"]), "meteorology": self.emb_met(g["meteorology"]),
"static": self.emb_static(static), "calendar": self.emb_cal(cal)}
if group_mask is not None:
for grp in h:
if grp in group_mask:
mk = group_mask[grp].unsqueeze(-1).float()
mk = mk.to(h[grp].device)
h[grp] = h[grp]*(1-mk) + self.mask_tok[grp].unsqueeze(0)*mk
return self.fusion(torch.cat([h["satellite"],h["meteorology"],h["static"],h["calendar"]], -1))
# ------------------------------------------------------------- temporal
class TemporalEncoder(nn.Module):
def __init__(self, d_model, n_heads, ff, layers, T=7):
super().__init__()
enc = nn.TransformerEncoderLayer(d_model, n_heads, ff, batch_first=True, dropout=0.1)
self.tr = nn.TransformerEncoder(enc, layers)
self.slot = nn.Parameter(torch.randn(1, T, d_model)*0.02) # learned slot positions
def forward(self, H): # H:[N,T,d]
return self.tr(H + self.slot[:, :H.size(1)]) # returns [N,T,d] (pre-pool)
# ------------------------------------------------------------- heads
class LogStudentTHead(nn.Module): # ADR-015
def __init__(self, d_model, horizons=4, P=7):
super().__init__()
self.H, self.P = horizons, P
self.trunk = nn.Linear(d_model+1, d_model) # +1 window-completeness scalar
self.mu = nn.Linear(d_model, horizons*P)
self.log_sigma = nn.Linear(d_model, horizons*P)
self.log_nu = nn.Parameter(torch.zeros(P)) # nu per pollutant
def forward(self, z, completeness):
h = F.gelu(self.trunk(torch.cat([z, completeness.unsqueeze(-1)], -1)))
N = z.size(0)
mu = self.mu(h).view(N, self.H, self.P)
log_sigma = self.log_sigma(h).view(N, self.H, self.P).clamp(-7.0, 7.0) # bound sigma in (~1e-3, ~1e3): kills backward blow-up
nu = (F.softplus(self.log_nu) + 2.0).clamp(max=100.0) # >2 finite variance, capped
return mu, log_sigma, nu
class ReconHead(nn.Module): # SSL, pre-pool per-timestep
def __init__(self, d_model, n_cont=29):
super().__init__(); self.lin = nn.Linear(d_model, n_cont)
def forward(self, h_seq): return self.lin(h_seq) # [N,T,29]
# ------------------------------------------------------------- full model
class AtmosIQNet(nn.Module):
def __init__(self, cfg=None):
super().__init__()
cfg = cfg or {}
d = cfg.get("d_model",96); heads = cfg.get("n_heads",4); ff = cfg.get("ff_dim",384)
L = cfg.get("n_blocks_L",2); T = cfg.get("seq_len_T",7)
cat = cfg.get("categorical", {"land_use_class":4,"grap_stage":3,"n_landuse":18,"n_grap":5})
cal_num = cfg.get("calendar_num_dim", 16) # Group D numeric width (from meta.json)
dims = cfg.get("feature_group_dims", {"satellite":18,"meteorology":12,"static":13,
"calendar": cal_num + cat.get("grap_stage",3)})
sub = cfg.get("sub_embed_dims", {"satellite":32,"meteorology":24,"static":16,"calendar":16})
P = len(cfg.get("pollutants", ["pm2_5","pm10","no2","so2","co","o3","nh3"]))
horizons = len(cfg.get("horizons",[0,1,2,3]))
self.assemble = GroupAssembler(dims, sub, cat, d)
self.gats = nn.ModuleList([PhysicsBiasedGAT(d, heads) for _ in range(L)])
self.temporal = TemporalEncoder(d, heads, ff, L, T)
self.head = LogStudentTHead(d, horizons, P)
self.recon = ReconHead(d, n_cont=cfg.get("n_recon_channels",29))
def encode(self, groups_t, ei, e_hat, n_hat, wu, wv, blh, group_mask_t=None):
"""Window encode. Spatial GAT is BATCHED across T timesteps (block-diagonal graph):
T*N nodes, edges replicated + offset by t*N, physics bias per timestep. One GAT pass
instead of a Python T-loop -> big GPU speedup. Timesteps stay disconnected."""
T = len(groups_t); N = groups_t[0]["satellite"].shape[0]
src, dst = ei[0], ei[1]; E = src.numel()
# assemble each timestep (cheap Linears) -> [T*N, d]
H = torch.cat([self.assemble(groups_t[t], None if group_mask_t is None else group_mask_t[t])
for t in range(T)], 0) # [T*N, d]
# replicate edges for each timestep, offset by t*N
offs = (torch.arange(T, device=src.device)*N).view(T,1)
src_b = (src.unsqueeze(0)+offs).reshape(-1); dst_b = (dst.unsqueeze(0)+offs).reshape(-1)
ei_b = torch.stack([src_b, dst_b]) # [2, T*E]
# physics bias per timestep (cheap) -> [T*E]
lb = torch.cat([phys_log_bias(wu[t], wv[t], blh[t], src, e_hat, n_hat) for t in range(T)])
for gat in self.gats: H = gat(H, ei_b, lb) # ONE batched spatial pass per layer
H = H.view(T, N, -1).permute(1,0,2) # [N,T,d]
return self.temporal(H) # [N,T,d] pre-pool
def forward(self, groups_t, ei, e_hat, n_hat, wu, wv, blh, completeness, group_mask_t=None):
h_seq = self.encode(groups_t, ei, e_hat, n_hat, wu, wv, blh, group_mask_t)
z = h_seq[:, -1] # last-step pooling (pinned)
mu, log_sigma, nu = self.head(z, completeness)
return dict(mu=mu, log_sigma=log_sigma, nu=nu, h_seq=h_seq)
# ------------------------------------------------------------- losses
def student_t_nll(mu, log_sigma, nu, y, mask, y_logmean=None, y_logstd=None, y_eps=1e-3):
"""log-Student-t NLL on PER-POLLUTANT STANDARDIZED log(y+eps). mu is in standardized log space."""
import math
yl = torch.log(y.clamp_min(0) + y_eps)
if y_logmean is not None:
yl = (yl - y_logmean.view(1,1,-1)) / y_logstd.view(1,1,-1) # standardize per pollutant
sigma = F.softplus(log_sigma) + 1e-3 # log_sigma already clamped in head
nu = nu.clamp(2.05, 100.0).view(1,1,-1)
z = ((yl - mu) / sigma).clamp(-1e3, 1e3)
nll = (torch.lgamma(nu/2) - torch.lgamma((nu+1)/2) + 0.5*torch.log(nu*math.pi)
+ torch.log(sigma) + (nu+1)/2*torch.log1p((z*z/nu).clamp(max=1e6)))
nll = torch.nan_to_num(nll, nan=0.0, posinf=1e4, neginf=0.0) # last-resort guard
return (nll*mask).sum()/mask.sum().clamp_min(1)
def ssl_recon_loss(recon, target, masked_and_observed):
"""SSL_ROADMAP §2: MSE over {masked AND originally-observed} standardized channels."""
d = (recon - target)**2 * masked_and_observed
return d.sum()/masked_and_observed.sum().clamp_min(1)
if __name__ == "__main__":
torch.manual_seed(0)
net = AtmosIQNet()
n = sum(p.numel() for p in net.parameters())
print(f"AtmosIQNet params: {n:,} (blueprint target ~287k)")
N, E, T = 600, 4000, 7
groups_t = [{"satellite":torch.randn(N,18),"meteorology":torch.randn(N,12),
"static_num":torch.randn(N,9),"landuse":torch.randint(0,11,(N,)),
"calendar_num":torch.randn(N,16),"grap":torch.randint(0,5,(N,))} for _ in range(T)]
ei = torch.randint(0,N,(2,E)); e_hat=torch.randn(E); n_hat=torch.randn(E)
wu=torch.randn(T,N); wv=torch.randn(T,N); blh=torch.rand(T,N)*1000; comp=torch.rand(N)
out = net(groups_t, ei, e_hat, n_hat, wu, wv, blh, comp)
print("forward OK. mu", tuple(out["mu"].shape), "nu", tuple(out["nu"].shape), "h_seq", tuple(out["h_seq"].shape))
y = torch.rand(N,4,7)*100; m=(torch.rand(N,4,7)>0.5).float()
nll = student_t_nll(out["mu"], out["log_sigma"], out["nu"], y, m)
rec = net.recon(out["h_seq"]); tgt=torch.randn(N,T,29); mo=(torch.rand(N,T,29)>0.7).float()
ssl = ssl_recon_loss(rec, tgt, mo)
(nll+0.5*ssl).backward()
print(f"nll={nll.item():.3f} ssl={ssl.item():.3f} — backward OK")