AxoBench v2 minimal: card and metadata
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- minimal/checksums.sha256 +0 -0
README.md
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@@ -52,9 +52,9 @@ its source and held-out flag; `morphologies/` holds the Allen SWC files.
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| Folder | Content |
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| `train/` | 6,000 shards, 24,000 traces (12 training cells x 2,000) |
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| `val/` | 756 shards, 3,000 traces (12 x 250) |
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| `test/` | 945 shards, 3,750 traces (15 x 250) |
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| `interventions/<condition>_<dose>/` | 15 folders, 600 pairs each (40 per cell), 9,000 pairs in total |
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| `morphologies/`, `morphologies.json` | cell index and reconstructions |
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| `dataset_package_manifest.json` | counts per split, cell and condition; generator settings and gains |
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@@ -66,8 +66,10 @@ and 8 ms.
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## Shard schema
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Each `.npz` shard has a JSON sidecar with the generator settings
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folder a `manifest.json` that lists its shards
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- `inputs`: `(n, 6000, 1278)` int8, input events per 1 ms bin on 639
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excitatory and 639 inhibitory synapse sites.
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| Folder | Content |
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|---|---|
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| `train/<cell>/` | 6,000 shards, 24,000 traces (12 training cells x 2,000) |
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| `val/<cell>/` | 756 shards, 3,000 traces (12 x 250) |
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| `test/<cell>/` | 945 shards, 3,750 traces (15 x 250) |
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| `interventions/<condition>_<dose>/` | 15 folders, 600 pairs each (40 per cell), 9,000 pairs in total |
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| `morphologies/`, `morphologies.json` | cell index and reconstructions |
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| `dataset_package_manifest.json` | counts per split, cell and condition; generator settings and gains |
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## Shard schema
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Each `.npz` shard has a JSON sidecar with the generator settings. Each split
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and intervention folder has a `manifest.json` that lists its shards (paths
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relative to the folder; split shards sit in one subfolder per cell) and sample
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ids.
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- `inputs`: `(n, 6000, 1278)` int8, input events per 1 ms bin on 639
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excitatory and 639 inhibitory synapse sites.
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minimal/checksums.sha256
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