diff --git "a/AP/GO/train/go_terms_train_0.01.json" "b/AP/GO/train/go_terms_train_0.01.json" deleted file mode 100644--- "a/AP/GO/train/go_terms_train_0.01.json" +++ /dev/null @@ -1,22582 +0,0 @@ -[ - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MLELLKSLVFAVIMVPVVMAIILGLIYGLGEVFNIFSGVGKKDQPGQNH", - "output": "plasma membrane ; xenobiotic transmembrane transporter activity ; response to antibiotic ; xenobiotic detoxification by transmembrane export across the plasma membrane" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MAEMTVELVAVERRLWSGSATLVSAQTTEGEIGVMPGHEPVLGQLVEAGVVAITTADGERIVAAVHGGFLSVTAKTVTILAESADLAEDIDVEAAKAVLAESGDDLEAIAVAKGRIRAVERA", - "output": "plasma membrane ; proton-transporting ATP synthase complex, catalytic core F(1) ; ATP binding ; proton-transporting ATP synthase activity, rotational mechanism" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MSSLSTSFDSSSDLPRSKSVDNTAASMKTGKYPKLENYRQYSDAQPIRHEALALKVDETKDSRHKFSSSNGENSGVENGGYVEKTNISTSGRMDFEGEAEAEAVKRYQLRSFALLSSNARPSRLAKSETHQKQIHVESIAPSLPKNAALERGHDTALPAGTSSNRCNLEASSSARTFTSARKASLVSAIFETSAESEHGTHPKQAKLKRRTYSTISTHSSVNPTTLLTRTASQKSDMGNDTRRIKPLRMDSRVSFHSEISQASRDSQETEEDVCFPMFRLLHTRVNGVDFDELEEYAQISNAERNLSLANHQRHSERTYNHTDQDTGFTNSASTSGSSAALKYTPEISRTLEKNCSVNEMYVSENNESVREDDKPDLHPDVTFGRNKIEGEKEGNDSSYSRAYYTLQNTEYQIPSRFSFFRSESDETVHASDIPSLISEGQTFYELFKGGDPTWWLDCSCPTDDEMRCIAKTFGIHPLTAEDIRMQETREKVELFKSYYFVCFHTFENDKESENYLEPINVYIVVFRSGVLTFHFDPISHCANVRRRVRQLRDYVSVNSDWLCYALIDDITDSFAPVIQSIEYEADSIDDSVFMTRDMDFAAMLQRIGESRRKTMTLMRLLSGKADVIKMFAKRCQDETNGIGPVLKSQTNMVNLQAEQENVNQNNSNNQISLSNSYMQTTSQPRGDIALYLGDIQDHLLTMFQNLLAYEKIFSRSHANYLAQLQVESFNSNNKVTEMLGKVTMLGTMLVPLNVITGLFGMNVKVPGRNGSIAWWYGILGVLLLLAVISWFLASYWIKKIDPPATLNEAAGSGAKSVISSFLPKRDKRFNDDSKNGNARVGVRRKSTVSLPSRYSRYN", - "output": "cell periphery ; plasma membrane ; inorganic cation transmembrane transporter activity ; magnesium ion transmembrane transporter activity ; intracellular magnesium ion homeostasis ; magnesium ion transport ; monoatomic cation transport ; transmembrane transport" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MIRIGQGFDVHQLVPQRPLIIGGVTLPYEKGLLGHSDADVLTHAIIDAILGAAGLGDIGQLFPETDPQFKNANSVNLLKKVNEKVGRSGFTIGNIDCTILAEEPKMSPYLAEMKKNLAASCHLAVTQVNIKATTMETMGFVGKKEGIGAIAVALLEK", - "output": "2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity ; metal ion binding ; isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway ; terpenoid biosynthetic process" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MQDQLICSGCRRVVQYRRGVAGVCCPGCNTLTAVNPSAVADMSELICSGCPTLLFYNRGASNIRCPSCNRLNSTRSANQIAHLTCGQCRTTLMHPPGASTVQCATCRYVNHVRDARPQTVLVENPKTLDDKGKLVSNVVVGVTSWKR", - "output": "nucleus" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MYLDHLTVQNFRNLKKLDVDFDPNVNIFIGKNAQGKTNLLEAIYFLALTRSHRTSSDRDLIGFDGEYTNLAGHVQKSQVTLNLRVLITKKGKKVWINRIEQAKLSKYVGQLNAILFSPEDLELIKGAPSLRRRFMDQEFGQINAEYLYFASKYRQVLIQKNNYLKQLAKGKAKDQVFLDVLSDQLAGIAAELIYRRFKFLTYLSHYASDAYTHISLGSEKLSIAYHPSVSDITADDTTEEIYQKILNSFNRNKASEIRKGTTTSGPHRDDIEFKLDGKNAHLYASQGQQRSIALSIKLAEIQLVHQLTDEYPLLLLDDVMSELDHGRQSALLNYIHGKTQTFITTTDLEGISWDIIKKPRVYHIQSGTISLEKEN", - "output": "cytoplasm ; ATP binding ; single-stranded DNA binding ; DNA repair ; DNA replication ; SOS response" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MLTLAHYLVLGAILFAIAIVGIFLNRRNVIIILMSIELMLLAVNTNFVAFSHYLGDVHGQIFVFFVLTVAAAEAAIGLAILVTLFRKLDTINVEDLDQLKG", - "output": "plasma membrane ; NADH dehydrogenase (quinone) activity ; quinone binding ; ATP synthesis coupled electron transport" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MKFELDTTDGRARRGRLVFDRGVVETPCFMPVGTYGTVKGMTPEEVEATGAQIILGNTFHLWLRPGQEIMKLHGDLHDFMQWKGPILTDSGGFQVFSLGDIRKITEQGVHFRNPINGDPIFLDPEKSMEIQYDLGSDIVMIFDECTPYPADWDYAKRSMEMSLRWAKRSRERFDSLGNKNALFGIIQGSVYEDLRDISVKGLVDIGFDGYAVGGLAVGEPKADMHRILEHVCPQIPADKPRYLMGVGKPEDLVEGVRRGIDMFDCVMPTRNARNGHLFVTDGVVKIRNAKYKSDTGPLDPECDCYTCRNYSRAYLHHLDRCNEILGARLNTIHNLRYYQRLMAGLRKAIEEGKLESFVTDFYQRQGREVPPLNVD", - "output": "metal ion binding ; queuine tRNA-ribosyltransferase activity ; queuosine biosynthetic process ; tRNA-guanine transglycosylation" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MAQKENTYPWPYGRQTAQSGLNILPQRVLRKEAVTPSALVLMSRSNTQPTAAPGQKVVENSSGTPNFSTRSFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLQHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKCRTFDEQRTATIMEELADALIYCHGKKVIHRDIKPENLLLGLQGELKIADFGWSVHAPSLRRKTMCGTLDYLPPEMIEGRTHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIGKVDLKFPPSVPAGAQDLISKLLKHNPSDRLPLAQVSAHPWVRAHSRRVLPPSAPQSVP", - "output": "chromosome passenger complex ; cytoplasm ; kinetochore ; midbody ; nucleus ; spindle microtubule ; spindle midzone ; spindle pole centrosome ; ATP binding ; histone serine kinase activity ; protein serine kinase activity ; protein serine/threonine kinase activity ; abscission ; cellular response to UV ; cleavage furrow formation ; mitotic cytokinesis checkpoint signaling ; mitotic spindle midzone assembly ; mitotic spindle organization ; negative regulation of B cell apoptotic process ; negative regulation of cytokinesis ; negative regulation of transcription by RNA polymerase II ; positive regulation of cytokinesis ; positive regulation of mitotic sister chromatid segregation ; post-translational protein modification ; protein localization to kinetochore ; protein phosphorylation ; regulation of cytokinesis" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MPARTAPARVPTLAVPAISLPDDVRRRLKDLERDSLTEKECVKEKLNLLHEFLQTEIKNQLCDLETKLRKEELSEEGYLAKVKSLLNKDLSLENGAHAYNREVNGRLENGNQARSEARRVGMADANSPPKPLSKPRTPRRSKSDGEAKPEPSPSPRITRKSTRQTTITSHFAKGPAKRKPQEESERAKSDESIKEEDKDQDEKRRRVTSRERVARPLPAEEPERAKSGTRTEKEEERDEKEEKRLRSQTKEPTPKQKLKEEPDREARAGVQADEDEDGDEKDEKKHRSQPKDLAAKRRPEEKEPEKVNPQISDEKDEDEKEEKRRKTTPKEPTEKKMARAKTVMNSKTHPPKCIQCGQYLDDPDLKYGQHPPDAVDEPQMLTNEKLSIFDANESGFESYEALPQHKLTCFSVYCKHGHLCPIDTGLIEKNIELFFSGSAKPIYDDDPSLEGGVNGKNLGPINEWWITGFDGGEKALIGFSTSFAEYILMDPSPEYAPIFGLMQEKIYISKIVVEFLQSNSDSTYEDLINKIETTVPPSGLNLNRFTEDSLLRHAQFVVEQVESYDEAGDSDEQPIFLTPCMRDLIKLAGVTLGQRRAQARRQTIRHSTREKDRGPTKATTTKLVYQIFDTFFAEQIEKDDREDKENAFKRRRCGVCEVCQQPECGKCKACKDMVKFGGSGRSKQACQERRCPNMAMKEADDDEEVDDNIPEMPSPKKMHQGKKKKQNKNRISWVGEAVKTDGKKSYYKKVCIDAETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAGTDTVLGATSDPLELFLVDECEDMQLSYIHSKVKVIYKAPSENWAMEGGMDPESLLEGDDGKTYFYQLWYDQDYARFESPPKTQPTEDNKFKFCVSCARLAEMRQKEIPRVLEQLEDLDSRVLYYSATKNGILYRVGDGVYLPPEAFTFNIKLSSPVKRPRKEPVDEDLYPEHYRKYSDYIKGSNLDAPEPYRIGRIKEIFCPKKSNGRPNETDIKIRVNKFYRPENTHKSTPASYHADINLLYWSDEEAVVDFKAVQGRCTVEYGEDLPECVQVYSMGGPNRFYFLEAYNAKSKSFEDPPNHARSPGNKGKGKGKGKGKPKSQACEPSEPEIEIKLPKLRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILLKLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEVRNGASALEISYNGEPQSWFQRQLRGAQYQPILRDHICKDMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTMARKLRYTHHDRKNGRSSSGALRGVCSCVEAGKACDPAARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLAKAIGLEIKLCMLAKARESASAKIKEEEAAKD", - "output": "female germ cell nucleus ; nucleoplasm ; nucleus ; pericentric heterochromatin ; replication fork ; DNA (cytosine-5-)-methyltransferase activity ; DNA binding ; DNA-methyltransferase activity ; methyl-CpG binding ; promoter-specific chromatin binding ; RNA binding ; zinc ion binding ; cellular response to amino acid stimulus ; cellular response to bisphenol A ; DNA methylation involved in embryo development ; DNA methylation on cytosine within a CG sequence ; DNA methylation-dependent heterochromatin formation ; DNA-templated transcription ; negative regulation of gene expression ; negative regulation of gene expression via CpG island methylation ; negative regulation of transcription by RNA polymerase II ; negative regulation of vascular associated smooth muscle cell apoptotic process ; negative regulation of vascular associated smooth muscle cell differentiation involved in phenotypic switching ; positive regulation of gene expression ; positive regulation of vascular associated smooth muscle cell proliferation" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MIYIVALTGGICSGKTTVSDRFKKIGINVIDTDVIGRKIIEKNKKISDSIKKKFGKKILNKDNSINRFLLRNCIFNEKKSRLWLENILHPEILKKSKKKIKLIQSTWCLWVVPLLFEKKIQKKANRILLIDTPIRIQIRRMIKRDKININEAKKIISYQVRRKKRISLSDDIILNKNKNIEKLSLYIHYLNNFYIYLSKQNNPKNMKKII", - "output": "cytoplasm ; ATP binding ; dephospho-CoA kinase activity ; coenzyme A biosynthetic process ; phosphorylation" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MSKVDLNKETGPREVFCGLTSIVWLHRRMPDAFFLVVGSRTCAHLIQSAAGVMIFAEPRFGTAILEEKDLAGLADAHEELDRVVNDLISRRPEIKTLFLVGSCPSEVIKLDLATVAEKLNSRFLGQVRFVNYSGSGIETTFTQGEDGALKALVPLMESTDDEKLLLVGTLANNVEDRFKKIFNNIGITNVESFPPRQSTELPKIGKNTKVLLAQPYLSDTVRDLKHRGCGIIQAPFPLGVEGSTKWVLAAAAAFKIHELKVHEVIAPLANRARQAIEKHKEILRGKKLFLLPESQLEISLARFLHNECEMELIEVGTPYLNRDLMEEELNLLPDDTKIVEGQHVEKQLDRVRASNPDLVVCGMGLANPLEAEGISTKWSIEMVFSPIHGIDQAADLAGLFSRPLTRNQILTSKSLATH", - "output": "4 iron, 4 sulfur cluster binding ; ATP binding ; metal ion binding ; oxidoreductase activity, acting on iron-sulfur proteins as donors ; oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor ; light-independent chlorophyll biosynthetic process ; photosynthesis, dark reaction" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MKMLLLLLCLGLTLVCVHAEEASSTGRNFNVEKINGEWHTIILASDKREKIEDNGNFRLFLEQIHVLENSLVLKFHTVRDEECSELSMVADKTEKAGEYSVTYDGFNTFTIPKTDYDNFLMAHLINEKDGETFQLMGLYGREPDLSSDIKERFAQLCEEHGILRENIIDLSNANRCLQARE", - "output": "cytosol ; extracellular space ; nucleus ; insulin receptor activity ; odorant binding ; pheromone binding ; small molecule binding ; aerobic respiration ; cellular response to lipid ; cellular response to testosterone stimulus ; energy reserve metabolic process ; glucose homeostasis ; heat generation ; locomotor rhythm ; mitochondrion morphogenesis ; negative regulation of DNA-templated transcription ; negative regulation of gluconeogenesis ; negative regulation of insulin secretion involved in cellular response to glucose stimulus ; negative regulation of lipid biosynthetic process ; negative regulation of lipid storage ; positive regulation of gene expression ; positive regulation of glucose metabolic process ; positive regulation of lipid metabolic process ; positive regulation of protein kinase B signaling" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MAKKVQAYVKLQVAAGMANPSPPVGPALGQQGVNIMEFCKAFNAKTDSIEKGLPIPVVITVYADRSFTFVTKTPPAAVLLKKAAGIKSGSGKPNKDKVGKISRAQLQEIAQTKAADMTGADIEAMTRSIEGTARSMGLVVED", - "output": "ribonucleoprotein complex ; ribosome ; large ribosomal subunit rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MEGISALEKNVAELTVMDVYDIASAVGQEFERVIDQYGCEVIGRLMPKVVRVLEILEVLVSRNHINPEMEELRLELDRLRLERMDRIEKEKKHQKELELVEDVWRGEAQDLLNQIAQLQEENKQLVSNLSQKDINLTEEEFQKHEGMSERERQVMKKLKEVVDKQRDEIRAKDRELVLKNEDVEALQQQQSRLMKINHDLRHRVTVVEAQGKALIEQKVELEAYLQTKEQEAASMRLEIGKLRDKLKGEQHTNGEEIKTETLNEESILETEKLSLDLKDSNRPRFTLQELRDVLHERNELKAKVFMLQEELAYYKSEEADEEHKLPQSSPVIDSKAPIPQESGIKRLFSFFSRDKKRMPMMQKNVHFQESFGQWTEYNRDDVYTEQGQEALQHM", - "output": "centrosome ; cilium ; cytosol ; membrane ; protein dimerization activity ; epithelial cell morphogenesis ; protein transport from ciliary membrane to plasma membrane ; regulation of neuron death" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MDVSILRDVRPPVTSYAPNIWADTFSNISLDEEVQKKYAETIEALKQVVRGMLMAAATPIKQMIFIDTLERLGLAYHFETEIEHKLQKIYDDNVCGDDCDLFTTALRFRLLRQHRHHVSCDVFDKFLYEEGKFKGDAEGLLSLYEASHVRFHNEKILEEAERFTRQELSCWIKLQSPLKDKVKRALERPLHREVPILYARHFISIYEKDESMDEHLLKLAKFNFNFLQNLYKKELYDLSRWWNKFDLKTKLPYIRDRLAEAYLWGVGYHFEPQYSYVRKGVVLSIKIIGILDDTYDNYATVNEAQLFTEILDRWSMDEIDRLPDYMKIVLHFVMSAYEEYERDAKIVYGKKFASPYFKETIQQLARGYNQELKWVMEKQMPPFKDYLKNSEITSCIYIMFASIIPGLKSFTQEAIDWIKNEPNFAVKAGLIGRYWDDIGSHKRESKGGEMLTVMDCYMKQYSVSIQETISEFAKAVEDSWKEVNEGWVYTISMSKEITVQFLNYSRMCDASYNRNNGDGYTDPSFAKSNITALFVDPIII", - "output": "magnesium ion binding ; terpene synthase activity ; diterpenoid biosynthetic process" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MAPGQNRVVALVDMDCFFVQVEQRQNPHLRNKPCAVVQYKSWKGGGIIAVSYEARAFGVTRNMWADDAKKLCPDLLLAQVRESRGKANLTKYREASVEVMEIMSYFAVIERASIDEAYIDLTSAVQERLQKLQGQPISADLLPSTYIEGLPRGPTVEETVQKEAIRKQGLLQWLDSLQSDDPTSPDLRLTVGAMIVEEMRAAIESKTGFQCSAGISHNKVLAKLACGLNKPNRQTLVSHGSVPQLFSQMPIRKIRSLGGKLGASVIEVLGIEYMGDLTQFTESQLQSHFGEKNGSWLYAMCRGIEHDPVKPRQLPKTIGCSKNFPGKTALATREQVQWWLLQLALELEERLTKDRNDNDRVATQLVVSIRFQGDRRLSSLRRCCALPRYDAHKMSQDAFAAIRNCNTSGIQTEWSPPLTMLFLCATKFSAAAPPACTDITAFLSSDSSCQPKVPIASSETRTQGSGPAVPTSKEAATSLASFFQKAAKKQRMKETSFVPLNTATEKLSSKPSLVFQSSQTTGSQSFFKQKSLLLQHTQLSNSAAPDPPQASPAAQPSCLPAECVDSGPDDGAVKPVSSKAVSTEMNVAGDSPNVLDSPAYNSQEVTQRATEDQVLCEKCDSLVPVWDMPEHTDYHFALELQKSFLQPCTSKPQAIPAVSPQGKRNPKSPSASSSKRLRPHGMQTLESFFKPLTH", - "output": "cytosol ; nucleoplasm ; nucleus ; replication fork ; site of double-strand break ; damaged DNA binding ; DNA-directed DNA polymerase activity ; metal ion binding ; cellular response to UV-C ; DNA replication ; DNA synthesis involved in DNA repair ; error-prone translesion synthesis ; postreplication repair ; pyrimidine dimer repair ; response to radiation ; response to UV-C" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MDVLTLPAYGKINLTLKVLGRRSDGYHNLSTIFQSIALADRLTFSRCREGIRLETSGLPVPQGPENLAYRAAARLQSRYGFPGVRITLKKQIPLAAGLAGGSADAAATLIGVNALFNLGLTPGQLAREGAALGSDVPFCVIGGTALGRGRGEELSLLPPLPTLWLVLVKPSFGVSTAAVYRGWDASPGQTPMEAPDEERALAAIRRGDRAGIMASLGNDLEAVTCRLYPEVMAIKMRLLAEGAERAVMCGSGPAVFGVAADGETARRIASRLQETYPETIVTRTL", - "output": "4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity ; ATP binding ; isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway ; phosphorylation ; terpenoid biosynthetic process" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MLHRYLPMTEEDKKEMLQTIGVQTIDELFSDIPESVRFKGDLKIKEAKSEPELLKELSQMASKNANLKEYASFLGAGVYDHYAPVIVDHVISRSEFYTAYTPYQPEISQGELQAIFEFQTMICELTGMDVANSSMYDGGTALAEAAMLAAGHTRKKKILVSSAVHPESRAVLETYAKGQHLEVVEINHKDGVTDLDVLQSEVDDTVACVIVQYPNFFGQVEKLADIEKIVHQQKSLFIVSSNPLSLGALTPPGKFGADIVIGDAQPFGIPTQFGGPHCGYFATTKAFMRKIPGRLVGQTVDSDGKRGFVLTLQAREQHIRRDKATSNICSNQALNALAASVAMTALGKQGVKEMARQNISKAQYAKRQFEAKGFTVTFAGPFFNEFVVDCKRPVKEVNDALLQKNIIGGYDLGRDYKEHENHMLVAVTELRTKEEIDTLVNEMGAIQ", - "output": "glycine dehydrogenase (decarboxylating) activity ; glycine decarboxylation via glycine cleavage system ; nucleoside metabolic process" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MKKQIISLGALAVASSLFTWDNKADAIVTKDYSKESRVNENSKYGTLISDWYLKGRLTSLESQFINALDILETYHYGEKEYKDAKDKLMTRILGEDQYLLERKKVQYEEYKKLYQKYKEENPTSKGLKLKTFDQYTIEDLTMREYNELTESLKSAVKDFEKDVEKIENQHHDLKPFTDEMEEKATSRVDDLANKAYSVYFAFVRDTQHKTEALELKAKVDLVLGDEDKPHRISNERIEKEMIKDLESIIEDFFIETGLNKPGNITSYDSSKHHYKNHSEGFEALVKETREAVANADESWKTKTVKKYGESETKSPVVKEENKVEDPQSPKFDNQQEVKTTAGKAEETTQPVAQPLVKIPQGTITGEIVKGPEYPTMENKTLQGEIVQGPDFPTMEQSGPSLSDNYTQPTTPNPILEGLEGSSSKLEIKPQGTESTLKGIQGESSDIEVKPQATETTEASQYGPRPQFNKTPKYVKYRDAGTGIREYNDGTFGYEARPRFNKPSETNAYNVTTNQDGTVSYGARPTQNKASETNAYNVTTHANGQVSYGARPTQKKPSETNAYNVTTHANGQVSYGARPTYNKPSETNAYNVTTHGNGQVSYGARPTYKKPSKTNAYNVTTHANGQVSYGARPTQNKPSETNAYNVTTHANGQVSYGARPTQNKPSETNAYNVTTHGNGQVSYGARPTYNKPSKTNAYNVTTHADGTATYGPRVTK", - "output": "peptidase activator activity ; positive regulation of peptidase activity" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MVLIRVLANLLLLQLSYAQKSSELVIGGDECNINEHPFLAFVTSDRRRCAGTLINQEWVLTAAHCNGKYMKIELGVHDKMVRNEDKQTRVPKQKFFCLSSKEYTMWDKDIMLIRLNTPVNNSTHIAPVSLASRPPVVGSVCRIMGWGTISSPKVILPDVPHCANIEIIKYSKCQGVHPELPAKGRVVCAGIWQGGKDSCHGDSGAPLICNGQLQGLLSWGGDPCAQPLQPGLYTDIFDYSDWIQSIIAGNTTATCPP", - "output": "extracellular region ; serine-type endopeptidase activity ; toxin activity ; proteolysis" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MNIITTTTTDTTTALLRLMAWLSPVFPVGSFSYSHGLERAVHDGYVADTATMSDWLRWLVTRGSGWNDAVLCAESWRRAVAKGDLVEVAELAEALAGSRERHMETMLQGEAFLAAARSWPSSVFDRLPADCPYPVAVGAVAGANKVSLGLTLAAFLQAFCINLLQASIRLSVMGQNGVTATMSDLEPVLAETATRIEKTSLSDLGSATYISDIMAMKHETQHSRLFRT", - "output": "cytoplasm ; nickel cation binding ; nitrogen compound metabolic process" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MDKNFYKNSLNIFNSNFSMKANLSEKDKFYADFWEKNQIYQQILRKRRGNPRFILHDGPPYANGDIHIGHALNKILKDIIVRYKTMAGFYSPFVPGWDTHGLPIENKIINQIGSKSTLEIRRKSNDFANSQILAQMKQFKKLNLLTDFKQIYQTNTPNYEAKQLKLFKKMVSRGLVYRALKPVYWSPSSQSALAEAEIEYLEYRSPSLFTSFDIKKGNNFVAENDKLIIWTTTPWTLIANSGVAVGENFDYVRIKNGENFYVLAANLLEKLAVIFDWKHYEIIDNFPGRAILGIKYLHPIFEKICPIVSGNHVSLDVGSGLVHLAPLFGEDDYWIGRENNLEMVMHVNDDGKFNENAGQFSGQFYADSNKLITEFLEKKSKILHLSFIDHSFPHDWRTLKPVIYRGTPQWFVSIEKIKKDLEKAIEEIEFPENWLKKRLTKMVVERKDWLISRQRSWGIPLIIFYDQNKDPVLDKPEIFDYIISLVEKFGSRIWYEKTTDELLPEKYQNLGWTKENDILDVWFDSGVSFFAANISDEKPPFDIYFEGSDQYRGWFNSSLINSVIYFGFSPYKKLLSHGFVVDAKGNKMSKSRGNGVDPLLILSKYGCDIFRLWVANSEYYNDIVYSEAIFEQNVEIYRKIRNTVRFLITNLADFKPTKYELTEVDLYIFNKIQKLKNEIIQNYDQNRFVRVVKIINNFIIEFSNFYLSIVKDILYADKKESLKRRQVQYNLYELLQVLNIAIAPIMPTTAEEIYSFIQKNNKQISVHMEEFFKESHFDEELDAKWNEFFQIKDSVYQLIEQKIKSKEIKRPNEVGVLLKTDSDFIKSIDLKKLLMVAKVEFSNGKTEILQLNWEKCPRCWNHFEKINKVCARCFEVLSEIVPEKNS", - "output": "cytoplasm ; aminoacyl-tRNA editing activity ; ATP binding ; isoleucine-tRNA ligase activity ; tRNA binding ; zinc ion binding ; isoleucyl-tRNA aminoacylation" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MRRAEVARLIDHTLLAPAATDEEVLALCAEAARLGVGAVCVAPTHVYLAAASTYRSSHEAEPAFAVASVIGFPHGTHLTVIKAEEARRAVADGATEIDMVIDIANALDENWRAIETEISEVRLSVPPHVILKVILETALLPDANIIAACRAAEAGGAEFVKTSTGFHPAGGASVRAVRAMAEAVGGRLGIKASGGIRTAEKAKDMLEAGATRLGLSASADVLAGFPA", - "output": "cytoplasm ; deoxyribose-phosphate aldolase activity ; carbohydrate catabolic process ; deoxyribonucleotide catabolic process ; deoxyribose phosphate catabolic process" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MREIVHVQGGQCGNQIGAKFWEVISDEHGVDPTGTYHGDSDLQLERINVYYNEATGGRYVPRAVLMDLEPGTMDSVRAGPYGQLFRPDNFIFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAEGCDCLQGFQITHSMGGGTGSGMGTLLIAKVREEYPDRMMCTYSVFPSPKVSDTVVEPYNATLSVHQLVENADEVMVIDNEALYDICFRTLKLTTPTYGDLNHLVSACISGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMIGFVPLTSRGSQQYRALTVPELTQQMFDAKNMMCAADPRHGRYLTASALFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKASVCDIPPKGLKMSATFIGNSTAIQEMFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEGDEEEAEGEAAA", - "output": "cytoplasm ; microtubule ; GTP binding ; GTPase activity ; metal ion binding ; structural constituent of cytoskeleton ; microtubule-based process" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MISSRIGGAGGVELSRVNQQHDTVPAQTAHPNAVTAGMNPPLTPDQSGSHATESSSAGAARLNVAARHTQLLQAFKAEHGTAPVSGAPMISSRAALLIGSLLQAEPLPFEVMAEKLSPERYQLKQFQGSDLQQRLEKFAQPGQIPDKAEVGQLIKGFAQSVADQLEHFQLMHDASPATVGQHAKADKATLAVSQTALGEYAGRASKAIGEGLSNSIASLDEHISALDLTLQDAEQGNKESLHADRQALVDAKTTLVGLHADFVKSPEAKRLASVAAHTQLDNVVSDLVTARNTVGGWKGAGPIVAAAVPQFLSSMTHLGYVRLSTSDKLRDTIPETSSDANMLKASIIGMVAGIAHETVNSVVKPMFQAALQKTGLNERLNMVPMKAVDTNTVIPDPFELKSEHGELVKKTPEEVAQDKAFVKSERALLNQKKVQGSSTHPVGELMAYSAFGGSQAVRQMLNDVHQINGQTLSARALASGFGGAVSASSQTLLQLKSNYVDPQGRKIPVFTPDRAESDLKKDLLKGMDLREPSVRTTFYSKALSGIQSSALTSALPPVTAQAEGASGTLSAGAILRNMALAATGSVSYLSTLYTNQSVTAEAKALKAAGMGGATPMLDRTETALNNIRHPNRESLPHTFQKSTLSGIPRVAENAYHMGRGALQLPTQMAVDTVRVVDEGVLNAVASAREALKQPTKDDDALRALEEGLLDPR", - "output": "extracellular region ; host cell membrane ; membrane" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MAGRKGGRAKRRKVCFFTSNGITRIDYKDVDLLKRFVSERGKILPRRVTGTSAKYQRKLTVAIKRARQMALLPYVGE", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MQLRDLAPRSPNVAAPPYNGLPPPHLLLGYQAMHRALNDYLFDNRVFMQIGYDSPPQRPRRLFWTCLTDCSYAVNVGQYMRFLDLDNFHGTFTQMHNAVLMDRVAADMGRAHLRGRGIDVGRHGQVLPQLDAEHHSLLSGNGAGGLQEGVLMRTASAADAELLAAIRQLRVALCHYLFCYAYDLFQTEERYRFLPGSDVFLEPNWLSYFAEAFAELDTQQLVRDAERKFRGRRDVEEPTETMARCFMSTLASDAVSLAGTGLSGGAITLCSRRVTDRTGLRPRDRHGRAITASEARRIRPRAVRAFVDRLPRVTRRRRRPPSPAPPPEEIEEAAMEVEEPEEEEEELLDEVIRTALEAIGALQDELSGAARRHELFRFANDFYRMLLTARDAGLMGESFLRKWVLYFFLAEHIASTLYYLYSHFIANREFRRYVDVLTLQVLVVGWDVNAQQVFKRIWSEQSNPATIFETLWERILRDFLMMVERTGQFEGMDDADQQLFLSDIQYRDRSGDIEEVLKQLNLSEELIDSIDISFRIKFKGIVAIATNEEIKANLRRVLRHRREDIEAAARRGQPL", - "output": "host cell nuclear matrix ; double-stranded DNA binding ; single-stranded DNA binding ; DNA replication ; viral DNA strand displacement replication" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEEEYEDEEEVQADDM", - "output": "cytoplasm ; microtubule ; GTP binding ; GTPase activity ; metal ion binding ; structural constituent of cytoskeleton ; microtubule cytoskeleton organization ; mitotic cell cycle" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MNNAPHLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVAPSTTMQEQLRPMLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGDQGGFVLAPQDNLF", - "output": "cytosol ; bacterial-type flagellum organization ; negative regulation of bacterial-type flagellum assembly ; protein folding" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MQVPGTMPAPVLKGQALWLPLLLMLSPQASGGLVITPPGPELVLNISSTFVLTCSGPAPVVWERLSQEPLQKMARTQDGTFSSTLTLTNVTGLDTGEYFCTYKGSHGLEPDGRKRLYIFVPDPTMGFLPVDPEELFIFLTEITEITIPCRVTDPRLVVTLHEKKVDIPLPIPYDHQRGFSGTFEDKTYVCKTTIGDKEVDSEAYYVYSLQVSSINVSVNAVQTVVRQGENITIMCIVTGNEVVNFEWTYPRMESGRLVEPVTDFLFNVPSHIRSILHIPSAELGDSGTYICNVSESVNDHRDEKSINVTVVESGYVRLLGELDAVQFAELHRSRALQVVFEAYPPPTVVWFKDNRTLGDSSAGEIALSTRNVSETRYVSELTLVRVKVAEAGYYTMRAFHEDAEAQLSFQLQVNVPVRVLELSESHPASGEQTVRCRGRGMPQPHLTWSTCSDLKRCPRELPPTPLGNSSEEESQLETNVTYWPEDQEFEVVSTLRLRRVDQPLSVRCTLHNLLGHDMQEVTVVPHSLPFKVVVISAILALVVLTIISLIILIMLWQKKPRYEIRWKVIESVSSDGHEYIYVDPMQLPYDSTWELPRDQLVLGRTLGSGAFGQVVEATAHGLSHSQATMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNVVNLLGACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQLCSDKRRPPSAELYSNALPAGLPLPSHVSLPGESDGGYMDMSKDESVDYVPMLDMKGGVKYADIESSSYMAPYDNYVPTAPERTCRATLINESPVLSYTDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNSLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIKRGYRMAQPAHASDEIYEIMQKCWEEKFEIRPPFSQLVLLLERLLGEGYKKKYQQVDEEFLRSDHPAVLRSQARLPGFPGLRSPLDTSSVLYTAVQPNEGDNDYIIPLPDPKPEVADGPLESSPSLASSTLNEVNTSSTISCDSPLEPQEEPEPEPEPQPEPQVVPEPPLDSSCPGPRAEAEDSFL", - "output": "apical plasma membrane ; cytoplasm ; cytoplasmic vesicle ; lysosomal lumen ; nucleus ; plasma membrane ; receptor complex ; ATP binding ; platelet-derived growth factor beta-receptor activity ; platelet-derived growth factor binding ; cell chemotaxis ; cell migration ; cell migration involved in coronary angiogenesis ; cell migration involved in vasculogenesis ; peptidyl-tyrosine phosphorylation ; phosphatidylinositol metabolic process ; phosphatidylinositol-mediated signaling ; platelet-derived growth factor receptor signaling pathway ; positive regulation of cell population proliferation ; positive regulation of ERK1 and ERK2 cascade ; positive regulation of kinase activity ; positive regulation of phosphatidylinositol 3-kinase activity ; positive regulation of phospholipase C activity ; positive regulation of phosphoprotein phosphatase activity ; positive regulation of smooth muscle cell migration ; positive regulation of smooth muscle cell proliferation ; protein autophosphorylation ; retina vasculature development in camera-type eye ; transmembrane receptor protein tyrosine kinase signaling pathway" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MAHMKTRLVYASILMMGALCLYFSMDSFRELPFVFKKSHGKFLQIPDIDCKQKPPFLVLLVTSSHKQLAARMAIRKTWGRETSVQGQQVRTFFLLGTSDSTEEMDATTLESEQHRDIIQKDFKDAYFNLTLKTMMGMEWVYHFCPQTAYVMKTDSDMFVNVGYLTELLLKKNKTTRFFTGYIKPHDFPIRQKFNKWFVSKFEYPWDRYPPFCSGTGYVFSSDVAIQVYNVSESVPFIKLEDVFVGLCLAKLKIRPEELHTKQTFFPGGLRFSVCRFQKIVACHFMKPQDLLTYWQALENSKEQDCPAV", - "output": "Golgi membrane ; membrane ; UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity ; lipid metabolic process ; protein O-linked glycosylation ; response to bacterium" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MGSEQNDSTSFTQSQASEPKLCVKGCGFFGSPSNMDLCSKCYRGICAEEAQTAVAKAAVEKSFKPSPPRSLFIAEPPAVVVEPKPEKAAVVVVSAEPSSSAVPEANEPSRPARTNRCLCCNKKVGIMGFKCKCGSTFCGEHRYPETHDCSFDFKEVGRGEIAKANPVVKADKIQRF", - "output": "DNA binding ; ubiquitin protein ligase activity ; zinc ion binding ; defense response to other organism ; proteasome-mediated ubiquitin-dependent protein catabolic process" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "AEKIKICLQKQVNSSFSLHNVFGGNLYATEEKRMFELVKPKAGASVLNQSTWICFGDSRTDQSNSAFPRSADVSAKTAEKFRSLSGGSLMLSMFGPPGKVDYLYQGCGKHKVFYEGVNWSPHAAIDCYRKNWTDIKLNFQKSIYELASQSHCMSLVNALDKTIPLQATKGVAKNCNNSFLKNPALYTQEVKPLEQICGEENLAFFTLPTQFGTYECKLHLVASCYFIYDSKEVYNKRGCGNYFQVIYDSSGKVVGGLDNRVSPYTGNSGDTPTMQCDMLQLKPGRYSVRSSPRFLLMPERSYCFDMKEKGLVTAVQSIWGKGRKSDYAVDQACLSTPGCMLIQKQKPYIGEADDHHGDQEMRELLSGLDYEARCISQSGWVNETSPFTEEYLLPPKFGRCPLAAKEESIPKIPDGLLIPTSGTDTTVTKPKSRIFGIDDLIIGLFFVAIVEAGIGGYLLGSRKESGGGVTKESAEKGFEKIGNDIQILRSSTNIAIEKLNDRISHDEQAIRDLTLEIENARSEALLGELGIIRALLVGNISIGLQESLWELASEITNRAGDLAVEVSPGCWIIDNNICDQSCQNFIFKFNETAPVPTIPPLDTKIDLQSDPFYWGSSLGLAITTPISLAALVISGIAICRTK", - "output": "host cell plasma membrane ; membrane ; viral envelope ; virion membrane ; host cell surface receptor binding ; sialate 4-O-acetylesterase activity ; sialate 9-O-acetylesterase activity ; endocytosis involved in viral entry into host cell ; fusion of virus membrane with host endosome membrane ; fusion of virus membrane with host plasma membrane ; virion attachment to host cell" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MASVTDGKTGIKDASDQNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILVGNKCDMEEERVVPTEKGRLLAEQLGFDFFEASAKENISVRQAFERLVDAICDKMSDSMDTDPSVLGASKTTRLSDTPPLLQQNCSC", - "output": "cytoplasm ; cytosol ; dopaminergic synapse ; endosome ; Golgi apparatus ; perinuclear region of cytoplasm ; plasma membrane ; synaptic vesicle ; synaptic vesicle membrane ; vesicle ; GDP binding ; GTP binding ; GTP-dependent protein binding ; GTPase activity ; myosin V binding ; antigen processing and presentation ; peptidyl-cysteine methylation ; positive regulation of dopamine uptake involved in synaptic transmission ; protein localization to plasma membrane ; protein secretion ; regulation of exocytosis ; regulation of synaptic vesicle cycle ; regulation of vesicle size ; vesicle docking involved in exocytosis" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MAASSISSPWGKHVFKAILMVLVALILLHSALAQSRRDFAPPGQQKREAPVDVLTQIGRSVRGTLDAWIGPETMHLVSESSSQVLWAISSAISVAFFALSGIAAQLLNALGLAGDYLAQGLKLSPGQVQTFLLWGAGALVVYWLLSLLLGLVLALLGRILWGLKLVIFLAGFVALMRSVPDPSTRALLLLALLILYALLSRLTGSRASGAQLEAKVRGLERQVEELRWRQRRAAKGARSVEEE", - "output": "extracellular exosome ; nuclear outer membrane ; sarcoplasmic reticulum membrane ; voltage-gated monoatomic ion channel activity ; cellular response to gamma radiation ; intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator ; negative regulation of cell death ; regulation of monoatomic ion transmembrane transport" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MNKGRVTQIMGPVVDVKFDGGKLPEIYNALTVKQSNENGTSINLTFEVALHLGDDTVRTVAMSSTDGLVRGTEVEDTGKAISVPVGDATLGRVFNVLGDAIDLDGEVPADVRRDPIHRQAPAFEELSTKVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHEMSDSGVIKKTAMVFGQMNEPPGARQRVALTGLTMAEHFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERITSTNKGSITSIQAVYVPADDYTDPAPATTFAHLDATTNLERRLTQMGIYPAVDPLASTSRALSPEIVGEEHYEVARQVQQTLQRYKELQDIIAILGMDELSEEDKLVVHRARRIQFFLSQNFHVAEQFTGQKGSYVPVKETVRGFKEILEGKYDDLPEDAFRLVGGIEEVIENAKKMMA", - "output": "plasma membrane ; proton-transporting ATP synthase complex, catalytic core F(1) ; ATP binding ; proton-transporting ATP synthase activity, rotational mechanism ; proton-transporting ATPase activity, rotational mechanism" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MNSKQITTLWCAVIVEELIRQEAGFFCISPGSRSTPLTLAVASNPKARFRMFPDERSAGFYALGYARATGMPAVLVCTSGTAVANYFPAVVEASADAQPMLVLSADRPFELLECGANQAIRQQNIFGSYTRWSFELPEPGIATPLASLLSTVDHAVRKSLSLPAGPVHLNLPFREPLEPEAPDPGHPWAAPLETWQASGEPWSRFARPLHEPSAESIVTLRELLAQAERPLFVAGSMSNAADGEAVAALAESLGVPLFADLTSGIRLSSDCTPWQLAFQNEAFVERFQPDVVIHFGGHVIGKQPAMALRKQPPLHYVVVREHPGRFDPDHNVTLTLEASPAAVASALEGCREPVPGIRCRDAFSAASGIIDKMACVPELAVSEISAPRIVSSLAGDGHALFVANSMPARDMDLYAAPVAQKPLQVALNRGVSGIDGIISTAAGFSAGLGKPTTLLIGDISFLHDLNALCLLNHPWNPLIVIVLNNHGGSIFSFLPIASQTDRLDECFATPQNFSIESAARTFGIDYACPETNGDFTQLYAEALTTKKSLIIEIRSDREKNLLLHRSLKARLDPVFEKADCSR", - "output": "2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity ; magnesium ion binding ; manganese ion binding ; thiamine pyrophosphate binding ; menaquinone biosynthetic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MAREYPLERYRNFGIMAHIDAGKTTTTERILFYTGKNHKMGETHEGASTMDWMEQEAERGITITSAATTTFWQRHEDADFTPDDSERCRFNIIDTPGHVDFTIEVERSLAVLDGAICLLDGNAGVEPQTETVWRQADRYKVPRIVFVNKMDKIGADFFKCVAMIKDRTGGTPCPIALPIGAEDKLEGIVDLIKMEEWVWKGEDLGASWVRQPIRDELQDVAEEWRGKMIELAVEQDDEAMEAYLDGNEPDEATLRKLIRKGTLSLSFFPVMAGSAFKNKGVQPLLNAVVDFLPAPTDVPAYLGFAPGDETETRNIERSASDDQPFSALAFKIMNDPFVGSLTFTRIYSGQLKKGDQMLNATKGKRERVGRMMVMHAINREEIEEAFAGEIIALAGLKETTTGDTLCDPAKPVVLETMTFPEPVIEIAVEPKSKADQEKMGLALQRLAAEDPSFRVETDMESGQTIMKGMGELHLDILVDRMKREFKVEANIGAPQVAYRETISQPAEIDYTHKKQTGGTGQFARVKLQIEPTEPGEGYSFESKIVGGAVPKEYIPGVEKGIKSVMDSGPLAGFPVIDFKVALIDGAFHDVDSSVLAFEIAARAGMREGLKKAGAKLLEPIMRVEVVTPEEYTGSIIGDLTSRRGMVRGQDTRGNANVIDAFVPLANMFGYINNLRSMSSGRAVFTMQFDHYEAVPQNISDEIQKKYA", - "output": "cytoplasm ; GTP binding ; GTPase activity ; guanosine tetraphosphate binding ; translation elongation factor activity" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MKVFDYEDVQLIPNKCIVNSRSECDTTVILGKHAFKMPIVPANMQTIINRSIAEFLAENGYFYIMHRFNGSARIPFVKKMKERQWISSISVGVKKEEYLLIEELAKQGLTPDYITIDIAHGHSNSVIEMIQRIKTHLPETFVIAGNVGTPEAVRELENAGADATKVGIGPGKVCITKIKTGFGTGGWQLAALRWCAKAARKPIIADGGIRTHGDIAKSIRFGATMVMIGSLFAGHEESSGETKIENGIAYKEYFGSASEFQKGEKKNVEGKKIWIQHKGSLKDTLIEMHQDLQSSISYAGGRDLEAIRKVDYVIVKNSIFNGDTI", - "output": "GMP reductase complex ; GMP reductase activity ; purine nucleotide metabolic process" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MGARASVLSGGKLDKWEKIQLRPGGKKKYRLKHLVWASRELERFALNPNLLETVEGCRQIIRQLQPSLQTGSEELRSLFNTVATLYWVHQSIQVRDTKEALDKLEEEQNRTQQKTQQGKADKGVSQNYPIVQNLQGQMVHQALSPRTLNAWVKVIEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKDTINEEAAEWDRMHPVQAGPIPPGQIREPRGSDIAGTTSTLQEQITWMTSNPPIPVGEIYKRWIILGLNKIVRMYSPVSILDIRQGPKEPFRDYVDRFFRVLRAEQATQEVKNWMTETLLVQNANPDCRTILKALGSGATLEEMMTACQGVGGPGHKARVLAEAMSQVTNSAVMMQRGNFKGQRRIIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCSERQANFLGKFWPLNKERPGNFLQNRPEPTAPPAESFGFGEKITPSLRQEMKDQEQGPPLTSLKSLFGSDPLSQ", - "output": "host cell nucleus ; host cell plasma membrane ; host multivesicular body ; membrane ; viral nucleocapsid ; virion membrane ; RNA binding ; structural molecule activity ; zinc ion binding ; viral budding via host ESCRT complex" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MEEYSWENFLNDKLLATNQVSAAGLASEEDGVVYECVATPDENNPDFDKWSLFYKEDYDIEIEDENGSKTTKTITEGQSILTMFNEGYASDGIWLGGTKYQFINMDKGLEYEGHSFDVATCAKSKGGMHIIKVGGGHILIVLYDEEKEQDRGNSKNAALAFSKELIESTDTGAA", - "output": "actin cytoskeleton ; cytoplasm ; actin monomer binding ; phospholipid binding ; actin cytoskeleton organization ; cytoplasmic actin-based contraction involved in cell motility" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MDAATLTYDTLRFAEFEDFPETSEPVWILGRKYSVLTEKDEILADVASRLWFTYRKNFPAIGGTGPTSDTGWGCMLRCGQMIFAQALVCRHLGRDWRWTQRKRQPDSYCSVLQAFLDRKDSCYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLKKLAVFDTWSALAVHVAMDNTVVMADIRRLCRSSLPCAGAEAFPADSERHCNGFPAGAEGGGRAAPWRPLVLLIPLRLGLADVNAAYAGTLKHCFRMPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHTTQPAVAAADRCPVPDESFHCQHPPGRMSIAELDPSIAVGFFCETEDDFNDWCQQVSKLSLLGGALPMFELVEQQPSHLACPDVLNLSLDSSDAERLERFFDSEDEDFEILSL", - "output": "autophagosome ; cytoplasmic vesicle ; cytosol ; endoplasmic reticulum ; mitochondrion ; Atg8-specific peptidase activity ; endopeptidase activity ; scaffold protein binding ; autophagy ; lysosomal microautophagy ; mitophagy ; otolith mineralization completed early in development ; protein delipidation ; protein localization to phagophore assembly site ; protein transport ; proteolysis" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MVAEDAPVRGTCRVLFRTTTLIFLCTLLALSISILYESLIIRKQIMSQAGSTGSNFRLGSITDLLNNILSVANQIIYNSAVALPLQLDTLESTLLTAIKSLQTSDKLEQNCSWGAALINDNRYINGINQFYFSIAEGRNLTLGPLLNIPSFIPTATTPEGCTRIPSFSLTKTHWCYTHNVILNGCQDHVSSNQFVSMGIIEPTSAGFPSFRTLKTLYLSDGVNRKSCSISTVPGGCMMYCFVSTQPERDDYLSTAPPEQRIIIMYYNDTIVERIINPPGVLDVWATLNPGTGSGVYYLGWVLFPTYGGVIKDTSLWNNQANKYFIPQMVAALCSQNQATQVQNAKSSYYSSWFGNRMIQSGILACPLQQDLTNECLILPFSNDQVLMGAEGRLYMYGDSVYYYQRSNSWWPMTMLYKVTITFTNGQPSAISAQNVPTQQVPRPGTGDCSATNRCPGFCLKGVYADAWLLTNPSSTSTFGSEATFTGSYLNAATQRINPTMYIANNTQIISSQQFGSSGQEAAYGHTTCFRDTGSVMVYCIYIIELSSSLLGQFQIVPFIRQVTLS", - "output": "host cell plasma membrane ; membrane ; viral envelope ; virion membrane ; exo-alpha-(2->3)-sialidase activity ; exo-alpha-(2->6)-sialidase activity ; exo-alpha-(2->8)-sialidase activity ; host cell surface receptor binding ; viral entry into host cell ; virion attachment to host cell" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MGQKKKKLAKGRLDKFYYMAKEQGYRSRAAFKLIQLNKKYNFLGTAKACLDLCAAPGGWMQVASKYMPVQSLIVGVDLVPIRQVRNCIGLTEDITTQKCRTEIKKALKTWKVDVCLHDGAPNMGTSWVQDAYQQAELTLHALKLATEFLTTGGWFVTKVFRGSDYNSLIWVFNKLFKKVESTKPPSSRNASAEIFVVCQGFLNPKRIDPKLLDPKFVFKEIQEVKKVDVLSEKKKVNRAGYEDGVTVLYKKGFISDFVNSNEHLQDLANFNAFEFDEAAKIFEQHELTTPEIKELVKDLKVLNKNDFQKIIKWKKAMAAYKEKLDNPDEEETEKPEEKKELTAEEMEENLQEEMKEYLALVEKKKRKEKKRQNELKRKHQRKIELTMHIPGDKIEETTDGDLYSMKGKDEFDEDIVADHSDISSDEFDSDDSDDDDDDDNNGDSKLIDDDEYLEQQLDEQYKLYQQRIRKKAAKLDDVKVKKDKIGQDGYNEDDEEFVEEQEESNPLLVGNKRKEPDAQAVSSLFFDNELFGGVEYRNPGDSESEPEQDGDDDQDDENNKPIDISKLKKQKPQAAQPITKKQKTTNSAEFGKQKSKYQKNPTLDDKDDQDDDDDKGNSIKGFEEVPVQEEVEYESDSDEDIDDKIKTKALGEFLIRKKSRQDLIDDSFNKYAFNDTGLPNWFTDDENRHNKAQTPLTKEMVDEIRRKIKEIDDRPIKKIAEAKARKKYRLGKKMEKTRDKASSIVDNPEMSNREKSKAIEKLYSGTDKKNMKPKKIIMIAKKSKTAGGGTGKYKIVDKRMKKDLRAQKNKLKTVGRSKDSSKKSKPSGGKNKK", - "output": "nucleolus ; nucleus ; preribosome, large subunit precursor ; rRNA (guanine) methyltransferase activity ; rRNA (uridine-2'-O-)-methyltransferase activity ; rRNA methyltransferase activity ; maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) ; maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) ; rRNA methylation" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MVKLVFARHGESEWNKANLFTGWADVDLSEKGTQQAIDAGKLIKEAGIEFDQAYTSVLKRAIKTTNLALEASDQLWVPVEKSWRLNERHYGGLTGKNKAEAAEQFGDEQVHIWRRSYDVLPPNMDRDDEHSAHTDRRYASLDDSVIPDAENLKVTLERALPFWEDKIAPALKDGKNVFVGAHGNSIRALVKHIKGLSDDEIMDVEIPNFPPLVFEFDEKLNVVSEYYLGK", - "output": "2,3-bisphosphoglycerate-dependent phosphoglycerate mutase activity ; gluconeogenesis ; glycolytic process" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MAEQEFRHMVRITRKDVDGNSTIATALTEIRGIGKAFAIAICKVLDLDQDAQIGYIDDESVKQIEAVLENPQEFGIPEWFLNRRNDYETGETKHLIESDLNMTLRDDLNRMKMIRSYKGKRHEVGLPVRGQRTKSTFRHGSSVGVSRTRPTGN", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MKALDQLTFDNRFARLGDAFSTQVLPEPIADPRLVIASKSAMALLDLDPAQADTPVFAELFSGHKLWEGADPRAMVYSGHQFGSYNPRLGDGRGLLLAEVVNDAGEHWDLHLKGAGQTPYSRMGDGRAVLRSSIREFLASEALHALGIATSRALCVIGSSTPVWRETRESAAMLTRLAQSHVRFGHFEYFYYTKQPEQQRVLIDHVLEQHYPECREAEQPYLAMFRTIVERNAELIAHWQAYGFCHGVMNTDNMSILGITFDFGPYAFLDDFDANFICNHSDDRGRYSYANQVPIAHWNLSALAQALTTVIEVEPLKEALGLFLPLYQAHYLDLMRRRLGLTTAEDDDMALVERLLQRMQSGGVDYNLFFRRLGDQPVAEALKGVRDDFIDLAGFDAWGADYLARCEREAGNGDGRRERMHAVNPLYVLRNYLAQKAIEAAEAGDYSEVRRLHQVLSTPFEEQAGMQAYAERPPAWGKHLEISCSS", - "output": "ATP binding ; magnesium ion binding ; nucleotidyltransferase activity" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MANNEESRGLKSLFDWFANRRKAGATNPERQEREIADGLWHKCSKCGVLTYTKDLRANQMVCVECGHHNRVDSDERIRQLIDQNTWRPMDENLRATDPLQFRDRKAYSDRLREMEDKLGLLDAVKTGLGQINSSPVALAVMDFRFMGGSMGSVVGEKITRLIEQATQRRYPVVIICTSGGARMQEGMLSLMQMAKISAALERHRDARLLYIPVLTNPTTGGVTASFAMLGDIILAEPKATIGFAGRRVIEQTLREKLPDDFQTAEDLLKHGFVDDIVPRTQLKNTLSQLIALHQPVPTTPPMVLWETMSLSSTAVE", - "output": "acetyl-CoA carboxylase complex ; acetyl-CoA carboxylase activity ; ATP binding ; carboxyl- or carbamoyltransferase activity ; zinc ion binding ; fatty acid biosynthetic process ; malonyl-CoA biosynthetic process" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MKNEKRKTGIEPKVFFPPLIIVGILCWLTVRDLDAANVVINAVFSYVTNVWGWAFEWYMVVMLFGWFWLVFGPYAKKRLGNEPPEFSTASWIFMMFASCTSAAVLFWGSIEIYYYISTPPFGLEPNSTGAKELGLAYSLFHWGPLPWATYSFLSVAFAYFFFVRKMEVIRPSSTLVPLVGEKHAKGLFGTIVDNFYLVALIFAMGTSLGLATPLVTECMQWLFGIPHTLQLDAIIITCWIILNAICVACGLQKGVRIASDVRSYLSFLMLGWVFIVSGASFIMNYFTDSVGMLLMYLPRMLFYTDPIAKGGFPQGWTVFYWAWWVIYAIQMSIFLARISRGRTVRELCFGMVLGLTASTWILWTVLGSNTLLLIDKNIINIPNLIEQYGVARAIIETWAALPLSTATMWGFFILCFIATVTLVNACSYTLAMSTCREVRDGEEPPLLVRIGWSILVGIIGIVLLALGGLKPIQTAIIAGGCPLFFVNIMVTLSFIKDAKQNWKD", - "output": "plasma membrane ; (R)-carnitine:4-(trimethylammonio)butanoate antiporter activity ; carnitine transmembrane transporter activity ; transmembrane transporter activity ; 4-(trimethylammonio)butanoate transport ; carnitine metabolic process ; carnitine transport" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MSSENLPQSPERAESPQAPRRKPRVAVVFGGRSSEHGISVVTAGAVMRAIDRTTYDVLPIGITTDGRWALTADEPERMAITDRKVPDVDRLTESAEGSVVLSVDPGSREVVYTEPGSVPKALGEVDVVFPVLHGPYGEDGTLQGLLELSGVPYVGAGVLASAVGQDKEYMKRVFLSFGLPVGPYEVVRPREWDNDPAAARERIVDFAGEHGWPLFIKPARGGSSMGITKVDSVEGLDAAIEEARRHDPKFLVESLLRGREIECGVLEFEDGPRASVPAEIPPVTSHDFYDFEAKYIDSAAGLVPAPLTEEQTAEVRRLAVAAFDAVSCEGLVRADFFLTEDGTFVINEINTLPGFTPISMYPRMWQESGVDYPELVDRLIQAALSRSTGLR", - "output": "cytoplasm ; ATP binding ; D-alanine-D-alanine ligase activity ; metal ion binding ; cell wall organization ; peptidoglycan biosynthetic process ; regulation of cell shape" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MLPRKREIVAGEVEDLQKKTRAGEGEATREEGDAAMAGRGNEIDEDLHSRQLAVYGRETMKPLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNVELWDLSSNFFLSENDVGQNRAQACVQKLQELNNAVLVSALTGDLTKEHLSKFQAVVFTDISLDKAIEFDDYCHSHQPPIAFIKSEVRGLFGSVFCDFGPEFTVLDVDGEEPHTGIVASISNDNPALVSCVDDERLEFQDGDLVVFSEVHGMTELNDGKPRKVKNARPYSFFLEEDTSSFGAYVRGGIVTQVKPPKVIKFKPLKEAMSEPGEFLMSDFSKFERPPLLHLAFQALDKFRTELSRFPVAGSTDDVQRVIEYAISINDTLGDRKLEEIDKKLLHHFASGSRAVLNPMAAMFGGIVGQEVVKACSGKFHPLYQFFYFDSVESLPVDPLEPGDLKPKNSRYDAQISVFGSTLQNKLEEAKIFMVGSGALGCEFLKNLALMGISCSQNGNLTVTDDDVIEKSNLSRQFLFRDWNIGQPKSTVAATAAMVINPKLHVEALQNRASPETENVFNDAFWENLDAVVNALDNVTARMYIDSRCVYFQKPLLESGTLGAKCNTQMVIPHLTENYGASRDPPEKQAPMCTVHSFPHNIDHCLTWARSEFEGLLEKTPTEVNAFLSNPTTYISAARTAGDAQARDQLERVIECLDRDKCETFQDSITWARLKFEDYFSNRVKQLTFTFPEDSMTSSGAPFWSAPKRFPRPVEFSSSDPSQLSFILAAAILRAETFGIPISEWAKTPNKLAAEAVDKVIVPDFQPKQGVKIVTDEKATSLSSASVDDAAVIEELIAKLEEVSKTLPSGFHMNPIQFEKDDDTNFHMDVIAGFANMRARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKALAGGHKVEDYRNTFANLAIPLFSIAEPVPPKTIKHQELSWTVWDRWTVTGNITLRELLEWLKEKGLNAYSISCGTSLLYNSMFPRHKERLDRKVVDVAREVAKMEVPSYRRHLDVVVACEDDDDNDVDIPLVSVYFR", - "output": "cytoplasm ; nucleus ; ATP binding ; ubiquitin activating enzyme activity ; DNA damage response ; protein ubiquitination ; ubiquitin-dependent protein catabolic process" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MTAVHKDNLTSEHFIVCALYKFVALPEFEALRKPLLDVMEANEVRGTLLIASEGINGTVSAKRAGIDNLLKWLEQQPSLNNIVTKESYDDECPFYRTKVKLKKEIVTMGVEGIDPLKVVGSYVKPNEWNALISDPEVILIDTRNDYEIEIGTFQNAVDPNTKTFREFPQWAKENLDPSKHKKVAMFCTGGIRCEKSTAYMKEQGFDEVYHLEGGILKYLEEVPKDETMWEGECFVFDNRVAVNHDLQKGSYDQCHACRMPITEDEKLKAEYMEGVSCHHCIDNVSDEQRERFAERQKQIELAQARGEGHIGNEAQAILQQRKEAKNAKKQAQRSK", - "output": "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen ; tRNA modification" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MIRQAIAKVVELRDLSEGEMIEVMNQIMSGECTPAQIGSFITALRMKGETIAEISGAARVMRERATPIRVGRNVLDIDRDDINLDQETILDVVGTGGDGTNTFNISTTVSFIVSACGVKVAKHGNRSVSSACGSADVLEKLGVNLDVTPEQVERCINEIGIGFLFAPALHGAMKHAIGPRREIGIRTIFNILGPLTNPANADCQVMGVYREELVAKMAGVLHHLGCKRGFVVHGRDGMDEITLTGETAAAEVSPEGVRLFTITPEEFGFSRCSMQALKGGDAVANAAIVRAVLGGEPGPRREIVLLNAGFALLAAGRCATVAAGIDLAAQAIDSGAALMQIEKLATLTN", - "output": "anthranilate phosphoribosyltransferase activity ; magnesium ion binding ; tryptophan biosynthetic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MQIIEGKLQLQGNEKIAILTSRFNHIITDRLKEGAMDCFKRHGGDEELLDLVLVPGAYELPLILDKLLESGKYDGVCVLGAIIRGGTPHFDYVSAEATKGIASAMLKYSMPVSFGVLTTDNIEQAIERAGSKAGNKGFEAMSTLIELLSLCQTLKD", - "output": "riboflavin synthase complex ; 6,7-dimethyl-8-ribityllumazine synthase activity ; riboflavin biosynthetic process" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MEVLRRSSVFAAEVMEVFDRSPTDKELVSQAKALCRDYINSRLIRAGVSWSKPEHNTPVPGGKLAEVSAILLRLGDELEYIRPNVYRNIARQLNISLHSETVVTDAFLAVAAQIFTAGITWGKVVSLYAVAAGLAVDCVRHAQPAMVHTIVDCLGEFVRKTLVTWLKRRGGWADITKCVVSTDPSLRSHWLVAAVCSFGHFLKAIFFVLLPER", - "output": "mitochondrial outer membrane ; protein heterodimerization activity ; protein homodimerization activity ; extrinsic apoptotic signaling pathway in absence of ligand ; intrinsic apoptotic signaling pathway in response to DNA damage ; regulation of apoptotic process" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MSLSLWQQCLARLQDELPATEFSMWIRPLQAELSDNTLALYAPNRFVLDWVRDKYLNNINGLLTSFCGADAPQLRFEVGTKPVTQTPQAAVTSNVAAPAQVAQTQPQRAAPSTRSGWDNVPAPAEPTYRSNVNVKHTFDNFVEGKSNQLARAAARQVADNPGGAYNPLFLYGGTGLGKTHLLHAVGNGIMARKPNAKVVYMHSERFVQDMVKALQNNAIEEFKRYYRSVDALLIDDIQFFANKERSQEEFFHTFNALLEGNQQIILTSDRYPKEINGVEDRLKSRFGWGLTVAIEPPELETRVAILMKKADENDIRLPGEVAFFIAKRLRSNVRELEGALNRVIANANFTGRAITIDFVREALRDLLALQEKLVTIDNIQKTVAEYYKIKVADLLSKRRSRSVARPRQMAMALAKELTNHSLPEIGDAFGGRDHTTVLHACRKIEQLREESHDIKEDFSNLIRTLSS", - "output": "cytoplasm ; ATP binding ; DNA replication origin binding ; DNA replication initiation ; regulation of DNA replication" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MSILKKPDLTDPKLRAKLAKGMGHNYYGEPAWPNDLLYVFPVVILGTIACSIGLAILEPSSLGEKSNPFATPLEILPEWYFFPTFNLLRVIPNKLLGVLSMAAVPAGLLTVPFIENVNKFQNPFRRPIATTIFLISTVITIWLGIGATMPINNAITLGLF", - "output": "chloroplast thylakoid membrane ; electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity ; electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity ; photosynthetic electron transport chain" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MELSRRDFMKANAAVAAAAAAGIVLPVKNVQADDSGIKWDKAPCRFCGTGCSVLVGTKDGRVVATQGDPDAEVNRGLNCIKGYFLSKIMYGADRVQTPLLRMKDGKFHKEGDFTPVSWDQAFSIMAEKVKATLKAKGGNAVGMFSSGQTTIFEGYAKVKLWKAGLRSNTIDPNARHCMASAAVAFLRTFGMDEPMGCYNDIEKTDGFVLWGSNMAEMHPILWSRISDRRLSDNNVKVVVMSTFEHRSFELADTPIIFKPHSDLAILNYIANYIIQNDKVNWDFVNKHTKFKRGETDIGYGLRPEHPLQKAAKNVKNAGKMHDSSFEEFKKIVEPYTLEKAHEISGVPKHQLEALAKMYADPAQKLVSFWTMGFNQHTRGVWVNHMIYNVHLLTGKISTPGCGPFSLTGQPSACGTAREVGTFVHRLPADMVVMNPKHVEICEKAWKLPKGTIPTVPGYAAVMQSRMLKDGKLNFLWQMCTNNMQGGPNINEEIFPGWRNPENFIVVSDPYPSVSAVAADLILPTCMWVEKEGAYGNAERRTQFWYQQVKGPAQSKSDLWQIVEFAKYFKAEEVWNEELMAQMPEYRGKTLYEILYLNGEVDKYQVPTNIPGYLNDEADDFGFYIQKGLFEEYAQFGRGHGHDLADFETYHQARGLRWPVVDGKETLWRYREGFDPYVKAGEDFRFYGYPDGKAIILGVPYESPAESPDEEYDLWLSTGRVLEHWHTGTMTRRVPELHRSFPNNLVWMHPSDAKKRGLRHGDKVKVITRRGEMISHLDTRGRNKCPEGLIFTTFFDAGQLANKLTLDATDPISGETDFKKCAAKVVKA", - "output": "periplasmic space ; 4 iron, 4 sulfur cluster binding ; electron transfer activity ; iron ion binding ; molybdenum ion binding ; molybdopterin cofactor binding ; nitrate reductase (cytochrome) activity ; nitrate reductase activity ; Mo-molybdopterin cofactor biosynthetic process ; nitrate assimilation" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MDSNPCQDVSGDTSSTPMANNNPTNDSTISSQNHSKIGLRKHQQQHYHQHSHSQMHSHSQQSPYINQLEYFTNNQFSRSFNSLILEDANDANTNNSSTTTLNKKTINKSPPFNIKQDLLNDSIDTFLDNSNTETIEDGDVTTTDDDHDFDDEDIEDPEAVQYTPTLNILKSKKVDSFDIISSKHRKSNSQITYNSHVRKPSEEDTSSSMATIRLSNNSQSSIKRSSKYLNLSIDSNLKTVDGGKIPDEIDDISLNEIDVAVAPNDFSSPLSARKPDIFAAITAANGNSNNQFKRPHKLVSQSPSPSSKNKFRISSSTTSSPQSNLHSPSKLGSKGFKMFKNANRDAIMSSSRVMTPEKPKMVSKIFGKSAKIRRAYTPTHTSTPMAVSSLNPPSSSTSNSTTAAITSTSPPANEHYDIDNDFDSPSKNRKSSNISASSIIIYQDENHIKSNHARKSSNPIPYPPTEPLPTNISASVAETGKGSTTTKSNLSKGCPLFDDKENKASYQFVKPLQTAFNSSGLVKKNSISGSSDRKLPPETPIKRNPLMILNTNKVVPPYSSGFAEGKDVMGDQHDIYSHIPCQNQRFPGSVNPNTTTNNNNTQQHHDSDLSIEVGRNNSYDASSSTINNTSYIKIFPSSELKKEQVLQRPQEDLELVFNSDIELDDNIIPETPTKKSLLPNQHHQHHLPLYTQSKSPLLKFDTEKDGRRNLSIVLDKSNATKREISEPPSTPINMSFAKNSFKKPMNNAERGDDPDSIIAQRIDIMPSLDEADSVSVYPSKIDEHLIEKFGMKNIKYIGSGAFSIAFECLFNNEKFAIKRTKKPLIGKLEKQTIKREIEALRVLTSIKEDEATNMQEQEEGKEYLVYFIEAWDFNNYYYIMTEFCEGGTLFDFLEENKHYKIDEFRIWKILIEILNGLKFIHSKNYLHLDLKPANIFITFEGSLKIGDFGLATKLPILEKDFDLEGDRNYIAPELINDKIYTPFADIFSLGLIILEIAANIILPDNGTPWRKLRSGDLSDAGRLSSDNISMFLQHNPNTNSNISGSGSRSGSGSTGGNGSAGDGSTNSTNFSYNSLSGNSLTLNPPVKAVHGTSDTNNTLASELSKNIEGLIPSWAPDFLVHGDSMNLDKLVNKMLRPNPFDRPSACNILEMPECLIVENRRKCGATIFEGEFGSPPDE", - "output": "cellular bud neck ; nucleus ; ATP binding ; metal ion binding ; protein serine kinase activity ; protein serine/threonine kinase activity ; cell morphogenesis ; protein phosphorylation" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "CNQSTLQMLLEIFVWIGYVSSGVNPLVYTLFNKTFRDAFGRYITCNYKATKSVKTVRKCSNKIYFRNPMTENSKFFMKHGMRNGINSTMYQSPVRL", - "output": "neuron projection ; plasma membrane ; synapse ; G protein-coupled serotonin receptor activity ; behavior ; heart development ; regulation of behavior ; smooth muscle contraction ; vasoconstriction" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MTDLSDIRREYAKGGLRRADLPQNPMDLFELWMTQARDAELSDPTAMCVATVDEHGQPFQRIVLLKRFDDTGFVFFTNLGSRKAQQIAANNKVSLHFPWHPLERQVSVLGEAQALSTAEVLKYFMTRPKDSQIAAWVSQQSSKLSARQVLEGKFFEMKAKFAKGDVPLPSFWGGYLVRPSSIEFWQGGEHRLHDRFIYTRHDAEWEIDRLAP", - "output": "FMN binding ; pyridoxamine-phosphate oxidase activity ; pyridoxine biosynthetic process" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "ASEDGGRGPYVQADLAYAYEHITHDYPKPTDPSKGKISTVSDYFRNIRTHSIHPRVSVGYDFGGWRIAADYARYRKWSDNKYSVSIKNMRVHKHNSNRKNLKTENQENGSFHAVSSLGLSAIYDFQINDKFKPYIGARVAYGHVRHSIDSTKKITGLLTTSTPGIMSGVYKVLRTPGAHRESDSIRRVGLGVIAGVGFDITPKLTLDAGYRYHNWGRLENTRFKTHEASLGVRYRF", - "output": "cell outer membrane ; porin activity" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MKLQVLVLVLLMSWFGVLSWVQAEFFTSIGHMTDLIYAEKDLVQSLKEYILVEEAKLAKIKSWASKMEALTSRSAADPEGYLAHPVNAYKLVKRLNTDWPALGDLVLQDASAGFVANLSVQRQFFPTDEDESGAARALMRLQDTYKLDPDTISRGELPGTKYQAMLSVDDCFGLGRSAYNEGDYYHTVLWMEQVLKQLDAGEEATVTKSLVLDYLSYAVFQLGDLHRAVELTRRLLSLDPSHERAGGNLRYFERLLEEERGKSLSNQTDAGLATQENLYERPTDYLPERDVYESLCRGEGVKLTPRRQKKLFCRYHHGNRVPQLLIAPFKEEDEWDSPHIVRYYDVMSDEEIERIKEIAKPKLARATVRDPKTGVLTVASYRVSKSSWLEEDDDPVVARVNRRMQHITGLTVKTAELLQVANYGMGGQYEPHFDFSRSDDEDAFKRLGTGNRVATFLNYMSDVEAGGATVFPDLGAAIWPKKGTAVFWYNLLRSGEGDYRTRHAACPVLVGCKWVSNKWFHERGQEFLRPCGTTEVD", - "output": "cytosol ; endoplasmic reticulum ; endoplasmic reticulum lumen ; intracellular membrane-bounded organelle ; nucleoplasm ; procollagen-proline 4-dioxygenase complex ; iron ion binding ; L-ascorbic acid binding ; procollagen-proline 4-dioxygenase activity ; peptidyl-proline hydroxylation to 4-hydroxy-L-proline" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MAYSATQSKSGYQAGVKDYRLTYYTPDYTPKDTDVLACFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDLLTDLDRYKGRCYDIEPVPGEDNQYFCFVAYPLDLFEEGSVTNMLTSIVGNVFGFKALKALRLEDVRIPVAYLKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYEALRGGLDFTKDDENINSQPFQRWRDRYLFVMEAVHKAQAETGEIKGHYLNVTAPTCEEMFKRAEFAKELGAPIIMHDYLTAGFTANTSLAKWCRDNGILLHIHRAMHAVIDRQKNHGIHFRVLAKCLRMSGGDHLHSGTVVGKLEGDRAITMGFVDLMRENYVEADRSRGIFFTQDWASMPGVMPVASGGIHVWHMPALVEIFGDDSVLQFGGGTLGHPWGNAPGATANRVALEACIQARNEGRDLAREGNDIIREAAKWSPELAAACELWKEIKFEFKAVDTL", - "output": "carboxysome ; magnesium ion binding ; monooxygenase activity ; ribulose-bisphosphate carboxylase activity ; photorespiration ; reductive pentose-phosphate cycle" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MAGELNAAPVLSTPEDHLFEYAVVPTDDQTKAKSDDELRDIYEITRTAKEVGEGGWRRIGLQFPDHMLCDAPRVVQLLEAELASLPQPTVPTSTADLQSTATACPEPSTTNNGQCGRNVQQNGTGCGCGKQAPAPVESQPKARRVYVLADTSYSACCVDEIAAEHVNADVVVHYGRSCLSPTSRLPVIYVFTKHILDRDAALVKFEKEYPDKEAKVVLMADVTYQVHVPSLLSELQSGGYVNLLATEIVHNPMGRIPNRKVVDAQGKEVEISHGSETSTGLDLRDYSIFHISQPPTALLLALCSRVKNLYIFQTSSDSSSLYSAQRLLGRRYARLLSLTTAGIIGILVNTLSVSNYLSSIDSIRKQIAAAGKKSYTMVVGKLNPAKLANFAEIDGWVVVGCWESSLIEDDAGFYKPVITPFELELALASDDERVWTGEWWGGIEAVKPPIDEKPGEKKSEENENNEAQDTAGAEQASGDGELDSEEESAPPEFDWRTGKLVSHSRPMRMAASKPKSAKKEDSSDKPDAPPRSSALTLRSKAQELASVNGVVSPGAEYLRTQRTWVGLGTDFDEEASMTIEEGRGGVARGYTVGGEGEKHLMS", - "output": "cytoplasm ; protein-containing complex ; 2-(3-amino-3-carboxypropyl)histidine synthase activity ; 4 iron, 4 sulfur cluster binding ; metal ion binding ; peptidyl-diphthamide biosynthetic process from peptidyl-histidine" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MAAAGQAEECLPLPAAESSKTSLPTPPAVPAGKKPKKCLVYPHPPRSSRLSRSVLRWLQGLDLSFFPRNVTRDFSNGYLVAEIFCIYYPWDLRLSSFENGTSLKVKLDNWAQIEKFLAKKKFKLPKELIHGTIHCKAGVPEILIQEIYTLLTHQEIRSIQDDLANFTDYIYQMRLPLVPRNTVSKSIKNNIRLSELLSNPNVLSNELKIEFLILLQMLQRKLSRKLNPGWFDVKPTVGEITIDRLPAHSYKRRYKSRGSKEKAAQPLSKSDNDGNARKEIHVKQSGNPCENTENL", - "output": "axoneme ; cytoplasm ; nucleus ; microtubule binding ; regulation of cytoskeleton organization" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MDELKKLAGVTAAKYVKNGMIVGLGTGSTAYFFVEEIGRRVKEEGLQVVGVTTSNRTTEQARGLGIPLKSADDIDVIDVTVDGADEVDPDFNGIKGGGGALLMEKIVATPTKEYIWVVDESKLVETLGAFKLPVEVVRYGSERLFRVFKSKGYCPSFRETEGDRFITDMGNYIIDLDLKKIEDPKQLANELDHTVGVVEHGLFNSMVNKVIVAGKNGLDILEK", - "output": "ribose-5-phosphate isomerase activity ; pentose-phosphate shunt, non-oxidative branch" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MTQAKDHAMNIGVFIPIGNNGWLLSENAPQYMPSFDLNKQITLKAEQHGLDFVLSMIKLRGFGGKTEFWDHNLESFTLMAGLAAVTSRIKLYATAPTLCLPPAIVARMASTIDSISNGRFGLNLVTGWQRPEYAQMGLWPGDEYFGRRYEYLSEYAQVLRELWETGRSDLKGEFFQMEDCRLSPRPQAEMKIICAGQSAAGMAFTATYADYNFCFGKGVNTPTAFAPTVERLEEAKAKTGRDVSSYVLFMVISDETDEAARAKWEHYKAGADAEAIAWLGLQGAADTKSGADTNIRQMADPTSAVNINMGTLVGSHATVAALLDEVVTVPGTGGVLLVFDDFLKGLDDFGTKIQPLMRSRRHVTGEALAEVA", - "output": "monooxygenase activity ; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen ; uracil oxygenase activity ; nitrogen utilization ; uracil catabolic process" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MLFSFFRNLCRVLYRVRVTGDTKALKGERVLITPNHVSFIDGILLALFLPVRPVFAVYTSISQQWYMRWLKSFIDFVPLDPTQPMAIKHLVRLVEQGRPVVIFPEGRITTTGSLMKIYDGAGFVAAKSGATVIPVRIEGAELTHFSRLKGLVKRRLFPQITLHILPPTQVEMPDAPRARDRRKIAGEMLHQIMMEARMAVRPRETLYESLLSAMYRFGAGKKCVEDVNFTPDSYRKLLTKTLFVGRILEKYSVEGERIGLMLPNAGISAAVIFGAIARRRIPAMMNYTAGVKGLTSAITAAEIKTIFTSRQFLDKGKLWHLPEQLTQVRWVYLEDLKADVTTADKVWIFAHLLMPRLAQVKQQPEEEALILFTSGSEGHPKGVVHSHKSILANVEQIKTIADFTTNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFLYPSPLHYRIVPELVYDRSCTVLFGTSTFLGHYARFANPYDFYRLRYVVAGAEKLQESTKQLWQDKFGLRILEGYGVTECAPVVSINVPMAAKPGTVGRILPGMDARLLSVPGIEEGGRLQLKGPNIMNGYLRVEKPGVLEVPTAENIRGEMERDWYDTGDIVRFDEQGFVQIQGRAKRFAKIAGEMVSLEMVEQLALGVSPDKVHATAIKSDASKGEALVLFTTDNELTRDKLQQYAREHGVPELAVPRDIRYLKQMPLLGSGKPDFVTLKSWVDEAEQHDE", - "output": "plasma membrane ; acyl--phospholipid O-acyltransferase activity ; ATP binding ; long-chain fatty acid ligase activity ; fatty acid metabolic process ; phospholipid biosynthetic process" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MEEDRGSALAAESALEKNVAELTVMDVYDIASLVGHEFERVIDQHGCEAIARLIPKVVRVLEILEVLVSRHHVAPELDELRLELDRLRLERMDRIEKERKHQKELELVEDVWRGEAQDLLSQIAQLQEENKQLMTNLSHKDVSFSEEEFQKHEGMSERERQVMKKLKEVVDKQRDEIRAKDRELGLKNEDVEALQQQQTRLMKINHDLRHRVTVVEAQGKALIEQKVELEADLQTKEQEMGSLRAELGKLRERLQGELNQNGEEEPVAELGGEECVSEAEKVAMDLKDPNRPRFTLQELRDVLHERNELKSKVFLLQEELAYYKSEEIEEENQIPQPPPIAHPRMSPQPESGIKRLFSFFSRDKKRLANTQRNVRIHETFGQWANCHRDDGYTEQGQEALQHL", - "output": "centriole ; centrosome ; ciliary basal body ; cilium ; cytoplasm ; cytosol ; membrane ; dynein light intermediate chain binding ; protein dimerization activity ; small GTPase binding ; cilium assembly ; epithelial cell morphogenesis ; protein transport from ciliary membrane to plasma membrane ; regulation of neuron death" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MTYHIDIQNATGKLLPLSEDEITKLASLALRDHKQDAELTVRLVDVEEMTYLNHTYRKKNKPTNVLAFPCSLPANIELECPLLGDVVICPEVLLAESAQFNKSLHAHWSLILIHGVLHLLGYDHIKDEEASIMQMLEAKLLAELGYANPYEVEENELE", - "output": "cytoplasm ; metalloendopeptidase activity ; RNA endonuclease activity ; zinc ion binding ; rRNA processing" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MAQHTVYFPDAFLTQMREAMPSTPSFDDFLAACQRPLRRSIRVNTLKISVADFLRLTAPYGWTLTPIPWCEEGFWIERDNEDALPLGSTAEHLSGLFYIQEASSMLPVAALFADGNAPQRVMDIAAAPGSKTTQIAARMNNEGTILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRLGGTLVYSTCTLNREENEAVCLWLKETYPDAVEFLPLGDLFPGTNKALTEEGFLHVFPQIYDCEGFFVARLRKTQAIPALPTPKYKVGNFPFSPVKDREAGQIRQAAASVGLNWDENLRPWQRDKELWLFPVGIEALIGKVRFSRLGIKLAETHNKGYRWQHEAVIALASPDNENAFELTPQEAEEWYRGRDVYPQAAPVADDVLVTFQHQPIGLAKRIGSRLKNSYPRELVRDGKLFTSNA", - "output": "cytoplasm ; RNA binding ; rRNA (cytosine) methyltransferase activity" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MNLSSLKPAEGAVKSRKRIGRGPGSGLGGTSTRGHKGAKSRSGYSKKIGFEGGQMPIQRRLPKFGFKNINRVEYKPINLSVLQTLSEANSLSKISVEDLIAAGLVSRNSLVKILANGTVTTALTVEAHAFSKTAEEAIVRAGGSVVKL", - "output": "large ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MSKDQIIEAIKEMTVLELNDLVKAIEEEFGVTAAAPVAVAGGAAEGGAAEQTEFDVVLESAGSSKIGVIKVVREITGLGLKEAKALVDGAPAPIKEGVAKEEAEEIKGKLEEAGASVELK", - "output": "ribonucleoprotein complex ; ribosome ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MTVLHSIDFFSSSSAPVAIEARAPQSAFPEHHHDFYEIVIVEEGAGVHVFNGNPYTLSRGCVCFVRDHDRHLFESTDDLFLTNVLFRAPDAFRFLSGVGHFLPRECDGVYPSHWRVNGQVLQQIKCLIACLEHAPKSDQVEDIALHESVFMQLLVKLWQGCQTQVGDDQEGRLYQLLDWLQNNYSEAVEWPELADRFALPLRTLHRQLKNKTGMTPQRYLTRLHLLQARHQLCYSDNSVTDIAYLCGFGDSNHFSTLFKREFSQSPRDLRSQL", - "output": "cytoplasm ; DNA-binding transcription factor activity ; sequence-specific DNA binding ; positive regulation of DNA-templated transcription ; rhamnose metabolic process" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MSQSPIELKGSSFTLSVIHLHDSRPEVIRQALQEKVDQAPAFLKNAPVVINVATLPNGANWKDLQQAVTSAGLRIVGISGCQDERQKRAIARAGLPLLSEGKGQKMAPEPVVSPPENVPTKTRIINTPVRSGQQIYARNCDLIVISSVSAGAELIADGNIHIYGMMRGRALAGASGDAQCQIFCTHLGAELVSIAGQYWLSDQIPSDYFGQAARLHLLDNALTIQPLN", - "output": "cell morphogenesis ; division septum assembly ; regulation of cell division ; regulation of cell septum assembly" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MKDILKLSIAEMHENLIKKEFSAVELTQAHIDAINNEQLNAFITKTPEVALNAARKADHILTHEQDKITSLTGIPVGIKDLFCTKNIKTTACSNILRNFTPQYDSTVVKRLIDDGAVMLGKLNMDEFAMGSSNSNSCFGPVENPWTRADGVKVVPGGSSGGSSAAVAGFLCAGALGSDTGGSVRQPAAFCGIVGLKPTYGRCSRSGMIAFASSLDQAGVLTRTVKDAALMLQPICGYDTQDSTSANITTPRFLDSITNIIKGKRIGIPKEYELSNKYKEYEEVSEMWLKGIKYLENEGAEIVNISLPHTSYALPVYYIICSAEASSNLARYDGIKYGTRVNSDNINEMYELTRGNNLGTEVKRRILIGAYALSSGYYDAYYNKAQCIRRLVTNDFVESFKSVDYILTPTAPKEAFAMDEQLDTLTMYLNDVFTVPASLAGLPAISIPIGLSKNKLPLSLQIIGNYYDEGGILNIASVIEKYTGNILK", - "output": "glutamyl-tRNA(Gln) amidotransferase complex ; ATP binding ; glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity ; translation" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MKFVEIRDLQVTYMGKDKPSIVVDKLDIEEGESVLITGRSGSGKSTLVSVINGVIPHLINAEIKGEVRVFGFDVKSTPIHEISKYVGTLLQDPDTQAFNYTIIDEVAFGVENYMISRDEMIERVEESMKIYGISHLRDREINTLSGGELQRTILASVLAMRPKALILDEPTSNIDPQGTREILELVKTFRSEGISLVLVEHKIERVLPFVDRIIVVEEGKIAVDVRKDEIVDKADFLYSLGLEIPDYMLFLKKNGFRKIDYEYLRKTYTYRPPSRIGGKGEALYASVKVKTKNGIYLINTKISLKQGTITALMGKNGSGKTTLLKVIVGLIDKKRLIVEEEKVIVNGVDLSKTKLVERGKFIAYLPQFFDVMFIKRTVEDEIKFSMKNRGTYDEKRLGEVLKMFSLDAYRKEDPLVLSMGQRRRVAMASVLAGGAKVILMDEPTSGQDWYHRQILGKELLELRDKGYTILVVTHDSRFVDRFADYLLVMNEGKIVLEGKPEEVFIKSLRHGIEPPLEYELGGLIKNEHFS", - "output": "plasma membrane ; ATP binding ; transmembrane transporter activity ; transmembrane transport" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MAVDHDDFLHLSKPLAPSAVGFNANVAPLTVTIQPQAILSILDHAVRRDIRDTQATRVIGALVGVRSEDGTDVEVRSTFAIPHTENEDQVEVDVEYQKNMLALTLKASPRESLLGWYTTSHELNSFSALIQNFFASPETGTFPHPAVHLTMSTDPGADIEPRCYISAPAAVSPDRAAESCFFIQVPHRTPPTNESDRAALEAIAAGKDDEARTAPVLSDVEALARSLEQTIDMLDRTSEYVGAVLDEEREPSHALGQYLMNNLSLAPKVDSVSIEHDFNNHIQDVLMVSYLTNTIRTQVDLAQRLALANLTDKDEKKEGEDGKAERGGGGRGGRGGKRGGGRGGGQQREPREPREPRESREPREPRESGE", - "output": "eukaryotic 43S preinitiation complex ; eukaryotic 48S preinitiation complex ; eukaryotic translation initiation factor 3 complex, eIF3e ; eukaryotic translation initiation factor 3 complex, eIF3m ; metallopeptidase activity ; translation initiation factor activity ; translation initiation factor binding ; formation of cytoplasmic translation initiation complex" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MVNIRPDEISNIIRKQIEQYNQEVKVINIGTVLQVGDGIARIYGLDKVMAGELVEFEDGTVGIALNLESDNVGVVLMGDGLSIQEGSSVEATGKIAQIPVSDAYLGRVVNALAQPIDGKGQIPAYEFRLIESPAPGIISRRSVYEPMQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQKGQNVICVYVAIGQKASSVAQVVNTFEERGALEYTIVVAETADSPATLQYLAPYTGAALAEYFMYRKQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSQLGEGSMTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLAVEEQVATIYTGVNGYLDVLEVEQVKKFLVQLREYLITNKPQFVEIIRSTKVFTEQAEIILKEAIKEHTEFFLLQEQK", - "output": "chloroplast thylakoid membrane ; proton-transporting ATP synthase complex, catalytic core F(1) ; ATP binding ; proton-transporting ATP synthase activity, rotational mechanism ; proton-transporting ATPase activity, rotational mechanism" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MGINMLDELKEDLVGIDIRFDEPLKRYTYTKVGGPADYLAFPRNRYELFRIVKFANKHNIPWMVLGNASNLIVRDGGIRGFVIMFDKLNGIAVNGYQVEAEAGANLIATTKVACFHSLTGFEFAAGIPGSIGGAVFMNAGAYGGEIAHILVSAQVLTKDGDIRTIDARDMRFGYRRSVLQETGEVVISAKFNLKPGDYEQIKHEMNRLNHLRELKQPLEYPSCGSVFKRPPGHFAGQLIMEANLEGHRIGGVEVSTKHAGFMVNVDQGTAKDYEDLIADVIAKVKENSGVTLEPEVRIIGDKLN", - "output": "cytoplasm ; FAD binding ; UDP-N-acetylmuramate dehydrogenase activity ; cell cycle ; cell division ; cell wall organization ; peptidoglycan biosynthetic process ; regulation of cell shape" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MGFQKFSPFLALSILVLLQAGSLHAAPFRSALESSPADPATLSEDEARLLLAALVQDYVQMKASELEQEQEREGSSLDSPRSKRCGNLSTCMLGTYTQDFNKFHTFPQTAIGVGAPGKKRDMSSDLERDHRPHVSMPQNAN", - "output": "extracellular region ; extracellular space ; hippocampal mossy fiber to CA3 synapse ; neuronal cell body ; neuronal dense core vesicle ; nucleus ; terminal bouton ; calcitonin receptor binding ; hormone activity ; identical protein binding ; activation of adenylate cyclase activity ; activation of protein kinase activity ; adenylate cyclase-activating G protein-coupled receptor signaling pathway ; aging ; artery vasodilation involved in baroreceptor response to increased systemic arterial blood pressure ; cellular response to nerve growth factor stimulus ; cellular response to tumor necrosis factor ; detection of temperature stimulus involved in sensory perception of pain ; embryo implantation ; feeding behavior ; inflammatory response ; monocyte chemotaxis ; negative regulation of bone resorption ; negative regulation of DNA-templated transcription ; negative regulation of ossification ; negative regulation of smooth muscle contraction ; neuropeptide signaling pathway ; ossification ; positive regulation of cytosolic calcium ion concentration ; positive regulation of cytosolic calcium ion concentration involved in phospholipase C-activating G protein-coupled signaling pathway ; regulation of cytosolic calcium ion concentration ; regulation of heart contraction ; response to heat ; response to pain ; smooth muscle contraction" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MVYSYTEKKRIRKDFGKRPQVLDVPYLLSIQLDSFQKFIEQDPEGQYGLEAAFRSVFPIQSYSGNSELQYVSYRLGEPVFDVQECQIRGVTYSAPLRVKLRLVIYEREAPEGTVKDIKEQEVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSDKGKTHSSGKVLYNARIIPYRGSWLDFEFDPKDNLFVRIDRRRKLPATIILRALNYTTEQILDLFFEKVVFEIRDNKLQMELIPERLRGETASFDIEANGKVYVEKGRRITARHIRQLEKDDIKHIEVPVEYIAGKVVSKDYVDESTGELICAANMELSLDLLAKLSQSGHKRIETLFTNDLDHGPYISETVRVDPTNDRLSALVEIYRMMRPGEPPTREAAESLFENLFFSEDRYDLSAVGRMKFNRSLLRDEIEGSGILSKDDIIDVMKKLIDIRNGKGEVDDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVKERLSLGDLDTLMPQDMINAKPISAAVKEFFGSSQLSQFMDQNNPLSEITHKRRISALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYAQTNEYGFLETPYRRVVDGVVTDEIHYLSAIEEGNYVIAQANSNLDDEGHFVEDLVTCRSKGESSLFSRDQVDYMDVSTQQVVSVGASLIPFLEHDDANRALMGANMQRQAVPTLRADKPLVGTGMERAVAVDSGVTAVAKRGGTVQYVDASRIVIKVNEDEMYPGEAGIDIYNLTKYTRSNQNTCINQMPCVSLGEPVERGDVLADGPSTDLGELALGQNMRVAFMPWNGYNFEDSILVSERVVQEDRFTTIHIQELACVSRDTKLGPEEITADIPNVGEAALSKLDESGIVYIGAEVTGGDILVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDSSLRVPNGVSGTVIDVQVFTRDGVEKDKRALEIEEMQLKQAKKDLSEELQILEAGLFSRIRAVLVSGGVEAEKLDKLPRDRWLELGLTDEEKQNQLEQLAEQYDELKHEFEKKLEAKRRKITQGDDLAPGVLKIVKVYLAVKRRIQPGDKMAGRHGNKGVISKINPIEDMPYDENGTPVDIVLNPLGVPSRMNIGQILETHLGMAAKGIGDKINAMLKQQQEVAKLREFIQRAYDLGADVRQKVDLSTFSDDEVLRLAENLRKGMPIATPVFDGAKEAEIKELLKLGDLPTSGQITLFDGRTGEQFERPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGNHQMEPGMPESFNVLLKEIRSLGINIELEDE", - "output": "DNA-directed RNA polymerase complex ; DNA binding ; DNA-directed 5'-3' RNA polymerase activity ; ribonucleoside binding ; DNA-templated transcription" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MNLVTRPGRVGIMGGTFDPIHYGHLVTAEAARWEFALQKVIFVPSGRPPHKKDYPVTDAEYRYQMTLLATASNPYFEVSRSEIDREGFSYTVDTVAEFRREYGPEVQLYFITGADAILEILTWKDVDTLLRECHFIAATRPGFQLNRLEESRPQLPVEGRHRIHLIEVPALAISSTDIRWRVKNNKPIKYLLPEAVEEYIRSRGLYRPRLDGVYEKG", - "output": "ATP binding ; nicotinate-nucleotide adenylyltransferase activity ; NAD biosynthetic process" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MAKTNISPGMQQYLDIKKDYPDAFLLFRMGDFYELFYDDAVKAAQLLEIGLTSRNKNAENPIPMAGVPHHSAQQYIDVLIELGYKVAVAEQMEDPKQAVGVVKREVVQVITPGTVVDSAKPDSANNFLVAVDFDGCRYGLAYMDVSTGEFCVTDLADFTSVRSEIQNLKAKEVLLGFDLSEEEQTILVKQMNLLLSYEETVYEDKSLIDGQLTTVELTAAGKLLQYVHKTQMRELSHLQALVHYEIKDYLQMSYATKSSLDLVENARTNKKHGSLYWLLDETKTAMGMRLLRSWIDRPLVSKEAILERQEIIQVFLNAFIERTDLSNSLKGVYDIERLSSRVSFGKANPKDLLQLGHTLAQVPYIKAILESFDSPCVDKLVNDIDSLPELEYLIRTAIDPDAPATISEGSIIRTGFDERLDHYRKVMREGTGWIADIEAKERQASGINNLKIDYNKKDGYYFHVTTSNLSLVPEHFFRKATLKNSERYGTAELAKIEGQMLEAREESSSLEYDIFMCIRAQVETYINRLQKLAKILATVDVLQSLAVVAETNHYIRPQFNDNHVITIQEGRHAVVEKVMGVQEYIPNSISFDQQTSIQLITGPNMSGKSTYMRQLALTVIMAQMGSFVAADHVDLPLFDAIFTRIGAADDLISGQSTFMVEMMEANQAIKRASDNSLILFDELGRGTATYDGMALAQAIIEYIHDRVGAKTIFATHYHELTDLSTKLTSLVNVHVATLEKDGDVTFLHKIAEGPADKSYGIHVAKIAGLPKSLLKRADEVLTRLETQSRSTEIMSVPPQVESSSAVRQGQLSLFGDEEKAHEIRQALEAIDVMNMTPLQAMTTLYELKKLL", - "output": "ATP binding ; ATP-dependent DNA damage sensor activity ; damaged DNA binding ; mismatched DNA binding ; mismatch repair" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MHAYLHCLSHSPLVGYVDPAQEVLDEVNGVIASARERIAAFSPELVVLFAPDHYNGFFYDVMPPFCLGVGATAIGDFGSAAGELPVPVELAEACAHAVMKSGIDLAVSYCMQVDHGFAQPLEFLLGGLDKVPVLPVFINGVATPLPGFQRTRMLGEAIGRFTSTLNKRVLFLGSGGLSHQPPVPELAKADAHMRDRLLGSGKDLPASERELRQQRVISAAEKFVEDQRTLHPLNPIWDNQFMTLLEQGRIQELDAVSNEELSAIAGKSTHEIKTWVAAFAAISAFGNWRSEGRYYRPIPEWIAGFGSLSARTEN", - "output": "3-carboxyethylcatechol 2,3-dioxygenase activity ; ferrous iron binding ; 3-phenylpropionate catabolic process" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MAVTKLVLVRHGESQWNKENRFTGWYDVDLSEKGVSEAKAAGKLLKEEGFSFDFAYTSVLKRAIHTLWNVLDELDQAWLPVEKSWKLNERHYGALQGLNKAETAEKYGDEQVKQWRRGFAVTPPELTKDDERYPGHDPRYAKLSEKELPLTESLALTIDRVIPYWNDTILPRMKSGERVIIAAHGNSLRALVKYLDNMSEDEILELNIPTGVPLVYEFDENFKPIKHYYLGNADEIAAKAAAVANQGKAK", - "output": "2,3-bisphosphoglycerate-dependent phosphoglycerate mutase activity ; gluconeogenesis ; glycolytic process" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE", - "output": "chloroplast thylakoid membrane ; photosystem II reaction center ; photosynthesis" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MIRVLVIDDSLFIRTVVQDMLSDDPDIQIVGVASDGLEALDKIRELKPDLITLDIEMPRLDGLSMLERKKEIDRFPKTLVLSSLTSEGAEMTKRAIALGADDFMLKPRGIKNIREIGGELKHKIKNICTIAYITAKPVLKDSNARNVVLIGSSAGGPPMLDTIVSKLPSDLNAAVIITQHMPKGGFTAALAARLNRISPLQIRETENGDVLKNGTVLVSRAGFHTIISSVLDKGGSQSGKIILTDSPPVHNVKPAVDKTFISAAQVFGNHCVTAILSGMGNDGGEGTEAIKKAGGVTIVCREEDCLVYGMARSALSRNCVDHVLSLQAIPEKIVETIRAMNG", - "output": "cytoplasm ; phosphorelay response regulator activity ; protein-glutamate methylesterase activity ; protein-glutamine glutaminase activity ; chemotaxis ; protein deamination ; protein demethylation" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MKLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEHLLDLNIKMLVIACNTATAVVLEEMQKQLPIPVVGVIHPGSRTALKVTNTYHVGIIGTIGTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQPLKSTDIDTLILGCTHYPILGPVIKKVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDHLFLTTGKIGLFKEIASKWFGQPIENVKHIHLEKE", - "output": "glutamate racemase activity ; cell wall organization ; peptidoglycan biosynthetic process ; regulation of cell shape" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MAEHSAPVLEIDPKYGPFDKHTPMMQQYLRLKSGHPNTLVFYRMGDFYELFFEDAEKASRLLDITLTARGSSNGHPIRMAGIPFHAAEQYLAKLVKLGESVAICEQIGDPATAKGPVERKVVRVVTPGTLTDAALLSDKINNHLLAIAHLPAKRGAAPLIGLAWLNLVGGELRVMECSPDQLDRELERIRPAEVLADDATLNTIQVDVARTRLPDWHFDVEAGTRRLREQLGVASLVAFGAETLTAALAAAGALLNYAAATQGQSLRHVIGLTVEHESEFIGLDTATRRNLELTETLRGQESPTLFSLLDTCATSMGSRLLRHWLHHPLRDRAIPQARQQAIEVLLGGDWQTLRSTLRTLSDVERITGRLALLSARPRDLSSLRDTLARLPEIREELPQSDAAPLLIELYAALTLPEDAHALLQRAVMAEPAAMVRDGGVIARGYDADLDELRDISENCGQFLVDLEARERERTGIANLRVEYNRVHGFYIEVTNGQAAKVPDDYRRRQTLKNAERYITPELKAFEDKALSAQDRALSREKLLYEELLQKLLPHLAEFKRIAAALAQADVLATLAERAHALSWSRPTLTDAPGIELTRARHPVVEQQVEQFVANDCMLQEARKLLLITGPNMGGKSTFMRQTALVVLLAYVGAFVPAEAAVIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLMDEIGRGTSTFDGLALAWAIARHLLSHNRSHTLFATHYFELTQLPQEFAQAANVHLSAVEHGDGIVFLHAVQEGPASQSYGLQVAQLAGVPQPVIRAARKRLAWLEQHSADTGATPQLDLFALAADMPIVDEGDADAETPDSALADALAGIDPDDMTPREALDALYRLKALASPAA", - "output": "ATP binding ; ATP-dependent DNA damage sensor activity ; damaged DNA binding ; mismatched DNA binding ; mismatch repair" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MAKVIGIDLGTTNSCVAVMEGGEPIVIANPEGNRTTPSVVAFSKTGERMTGQVAKRQAITNPERTIISIKRDMGTDHKVDIDGKKFSPQEISSMILQKLKSDAEAYLGETVTQAVITVPAYFSDAQRQATKDSGKIAGLEVLRIINEPTAAALAYGLDKEHDQKIMVYDLGGGTFDVSILEIGDGVFEVLATNGNNKLGGDDFDQRIIDFLVDTFKKESGIDLKNDKMAMQRLKEAAEKAKVELSGVTSSNINLPFITADASGPKHLDVTLTRAKFDEITADLVENTMVPTRQAMQDAGLTPDKIDKILLVGGSTRIPAVQEAVKKYLGKDPFKGINPDECVAVGAAIQAGVLTGDVTGLLLLDVTPLSLGLETLGGVFTKLIERNTTIPTKKSQVFSTAADGQTSVEIHVLQGEREMAQYNKSLGRFQLTGIPSAPRGVPQIEVTFDIDANGIVHVSAKDLGTGNEQKITITASTNLSDSDIDKAVKEAEKFAAEDKQRKEEIDVRNNADSLIYQSEKSLKDLGDKVSADDKSKIESGVNKVKDALKGTDIEVIKKATEELQQSFYDISSKIYQQTQGAQSDPGAAGFGGQQEAPGAGQDENVVDADYKVVDDDK", - "output": "ATP binding ; ATP-dependent protein folding chaperone ; unfolded protein binding" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MSWQQRVDDALTARRATDTLRRRYVVSQGAGRWLVANGRQYLNFSSNDYLGLSQHPQIIRAWQQAAIRFGVGSGGSGHISGYSVAHQALEEELAQWLGYPRALLFISGFAANQAVITALMKKNDRIVADRLSHASLLEAANLSPAQLRRFIHNDTQHLSRLLQSPCVGQQLVVTEGVYSMDGDSAPLAEIQHIARRHHAWLLVDDAHGIGVTGDEGRGTCWQRGVKPELLVVTFGKGFGVSGAAVLCSESVADYLLQFARHLVYSTSMPPAQAQALSASLAVIRSDEGRERREKLAALVQRFRAGVNASRFTLLNAHSAIQPLIVGDNSRALRLAEALRQQGCWATAIRPPTVPVGTARLRLTLTQAHEACDIDRLLEVLHGAGE", - "output": "8-amino-7-oxononanoate synthase activity ; pyridoxal phosphate binding ; biotin biosynthetic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MFDQLESIVGRYEELGELLSDPEVVSDTKRFMELSREEADLRDKVATYNEYKKVLETISDSEEMLGEGGLDDEMKEMLKEELSSAKSQKEVLEEEIKILLLPKDPNDGKNIILEIRGAAGGDEAALFAGDLLNMYQHFSESQGWKFEIMEANITGIGGYKEVSALISGPSVYSKLKYESGAHRVQRVPVTETQGRVHTSTATVLVMPEVEEFEMTIEQKDLRVDIYHASGAGGQNVNKVATAVRMVHLPTGIKVEMQEERTQQKNRDKAIKLLNTKVFDYYQQIELDKQNAERKSTVGTGDRSERIRTYNFPQNRVTDHRIGLTLQKLDSILSGKMDEVIDALIVYDQTKKLEELNK", - "output": "cytoplasm ; translation release factor activity, codon specific" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MFQNNPLLTQLKKNLHAKSPRVEGIVKSTERGFGFLEVDPQKSYFIPPKNMKNVMHGDKIIALLTTEKDREIVEPEKLIEPFLNRFVGKIEKKDNRLFIVPDYPFLKDLITCQPNKNCINIFQNGDWAVAQLKKHKLKGDHLFYAELTEKITQEDDPLIPWWVTLARHDLDRKEPLAEDDDLILKESDNRKDLTDLDFITIDNTNTKDIDDALFVSEKNNGDISLIVAIADPTAYIKHGSKLDVIASKRIFTNYLPGFNIPMLPRNLSEDICSLNPNKRRPVLACHITVLKNGNISNKIEFFLAWIKSKSKLSYDHVSDWIEKIGSWIPPTKSIANQILILHRLCLLRIKWRKKNAVLFKDSIEYRFHVSEHGKIIDVLIEKRRIAHKIIEESMIVANISAANFLSKNIGFGIYNVHSGFDLVNAENAVSFLRSYNLNFTVKEITTLKGFCNLRRVLNIISNNYIDSRIRRFQSFGDFSTIPGPHFALGFSEYATWTSPIRKYSDMINHRLLKSIIKKEKSIKPGEDIKIKISEQRRRNRMAERDVLDWLYTIFLQKKKYQNQKFNAEITDISRSGIRARLIENGANVFIPGTLIHPIREELNFNQESGKVFINGIMHYKISDLIQVTLSDIRLKTRSIIAKPVFEKFK", - "output": "cytosol ; exoribonuclease II activity ; RNA binding ; mRNA catabolic process" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MLKPPLPLRSLLFLQLPLLGVGLNPKFLTPSGNEDIGGKPGTGGDFFLTSTPAGTLDVSTLPLPKVQCFVFNVEYMNCTWNSSSEPQPNNLTLHYGYRNFNGDDKLQECGHYLFSEGITSGCWFGKKEIRLYETFVVQLQDPREHRKQPKQMLKLQDLVIPWAPENLTLRNLSEFQLELSWSNRYLDHCLEHLVQYRSDRDRSWTEQSVDHRHSFSLPSVDAQKLYTFRVRSRYNPLCGSAQHWSDWSYPIHWGSNTSKENIENPENPSLFALEAVLIPLGSMGLIVSLICVYCWLERTMPRIPTLKNLEDLVTEYQGNFSAWSGVSKGLAESLQPDYSERLCHVSEIPPKGGEGPGGSPCSQHSPYWAPPCYTLKPEP", - "output": "cell surface ; external side of plasma membrane ; receptor complex ; cytokine binding ; cytokine receptor activity ; interleukin-15 receptor activity ; cytokine-mediated signaling pathway ; interleukin-15-mediated signaling pathway ; positive regulation of phagocytosis" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MKILEDRIRQDGTVLTGNVLKVDNFLNHQVDPQLMNELGQEFARRFQDAHITKILTVESSGIAPAVMAGLHLNVPVIFARKHKSLTLTDNLYTAKVYSYTKQVTNEISIDRRFLAADDRVLIIDDFLANGQAVQGLLDIAKTAQITVAGVGVVIEKRFQKGHQMVTDAGIQLEALASIASFEAGQVIFAQD", - "output": "cytoplasm ; xanthine phosphoribosyltransferase activity ; purine ribonucleoside salvage ; xanthine metabolic process ; XMP salvage" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MQISQAGINLIKSFEGLQLKAYKAVPTEKHYTIGYGHYGSDVSPRQVITAKQAEDMLRDDVQAFVDGVNKALKVSVTQNQFDALVSFAYNVGLGAFRSSSLLEYLNEGRTALAAAEFPKWNKSGGKVYQGLINRRAQEQALFNSGTPKNVSRGTSSTKTTPKYKVKSGDNLTKIAKKHNTTVATLLKLNPSIKDPNMIRVGQTINVTGSGGKTHKVKSGDTLSKIAVDNKTTVSRLMSLNPEITNPNHIKVGQTIRLS", - "output": "host cell cytoplasm ; lysozyme activity ; cell wall macromolecule catabolic process ; defense response to bacterium ; killing of cells of another organism ; peptidoglycan catabolic process ; viral release from host cell by cytolysis" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MPREQGVRVVARNRRATHDYTIGDTWEAGLVLQGTEVKSLRAGKATLTDAFAQVDERGEVWMYNLHIPEYAFGTWRNHDVMRKRKLLLNKREIAKLSREADGPGKTIVPLQLYFKDGYAKVEIAVGTGKRDWDKRQAIRERDAKREAQRALANRVRNRKR", - "output": "cytoplasm ; RNA binding ; trans-translation" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "VDLTAEEKAAVLALWGKVNEDEVGGEALGRLLVVYPWTQRFFDSFGDLSTPAAVLGNAKVKAHGKKVLHSFGDGVHNLDNLKGTYAALSELHCDKLHVDPENFRLLGNVLVVVLAQHFGQEFTPELQAAYQKVVAGVANALAHKYH", - "output": "hemoglobin complex ; heme binding ; metal ion binding ; oxygen binding ; oxygen carrier activity" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MKRRKTALMMLSVLMVLAIFLSACSGSKSSNSSAKKSAGKPQQGGDLVVGSIGEPTLFNSLYSTDDASTDIENMLYSFLTKTDEKLNVKLSLAESIKELDGGLAYDVKIKKGVKFHDGKELTADDVVFTYSVPLSKDYKGERGSTYEMLKSVEKKGDYEVLFKLKYKDGNFYNNALDSTAILPKHILGNVPIADLEENEFNRKKPIGSGPFKFKEWKQGQYIKLEANDDYFEGRPYLDTVTYKVIPDANAAVAQLQAGDINFFNVPATDYKTAEKFNNLKIVTDLALSYVYIGWNEKNELFKDKKVRQALTTALDRESIVSQVLDGDGEVAYIPESPLSWNYPKDIDVPKFEYNEKKAKQMLAEAGWKDTNGDGILDKDGKKFSFTLKTNQGNKVREDIAVVVQEQLKKIGIEVKTQIVEWSALVEQMNPPNWDFDAMVMGWSLSTFPDQYDIFHSSQIKKGLNYVWYKNAEADKLMKDAKSISDRKQYSKEYEQIYQKIAEDQPYTFLYYPNNHMAMPENLEGYKYHPKRDLYNIEKWWLAK", - "output": "ATP-binding cassette (ABC) transporter complex ; outer membrane-bounded periplasmic space ; peptide transmembrane transporter activity ; establishment of competence for transformation ; peptide transport ; protein transport ; sporulation resulting in formation of a cellular spore" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MIWTRLPLYGPSKPSTGGWQPLRFDGGAFHVKGTAELARALLVLRLCAWPPLVTHGLAFQAWSQRLLGSRLSGALLRASIYGQFVAGETAEEVRNCVGQLQALGLQPLLAVPTEEEPDSTAKTSEVWYEENLSAMLRCVDLSRALVDAHGPARNSLMQLKVTALASTRLCKELSAWIQRPRGSSELSPERLAEAMDSGRNLQLSCLSTEQNQHLQASLSRLHRVAQHARAKCVRLLVDAEYTFINPALSLLVAALAVRWNSPEEGGPWVWNTYQAYLKDTHQRLEQDAEAAHKAGLAFGVKLVRGAYLDKERSMTQLQGKEDCTQPDYEATSRSYSRCLELMLRCVSNHGPPCHLMVASHNEESVRQATKRMWELGIPLDGPVCFGQLLGMCDHVSLALGQAGYMVYKSIPYGCLEEVIPYLIRRAQENRSVLQGARREQALLSQELWRRLLGRTA", - "output": "mitochondrial inner membrane ; mitochondrion ; FAD binding ; oxidoreductase activity, acting on the CH-NH group of donors ; proline dehydrogenase activity ; proline catabolic process to glutamate" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MKILISDNISLELFCKNPIKILEKSNKGIIGVLKNKSPIFYVITPYILKKIFDLECNLLDLDKTKQQISKKFSMHPQWTPDKDFIRQAALWGITLTEEILESELASFISYWQAEGCFFHHIQWQQKLARSLQKSRSISYMSQKKRDITYIPTPDQTVPNGFRGK", - "output": "primosome complex ; DNA replication, synthesis of RNA primer" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MKLTTFAPEFAEALPILEQIEAAGFEAYFVGGSVRDNLLGLPIHDVDIATSAYPAEIKQIFKRTVDTGIQHGTVMILDHGNGYEVTTFRTETGYQDFRRPDSVTFVRSLEEDLKRRDFTINALAMRADGEIIDLFDGIADLKAHKIRAVGVADERFHEDALRMMRAVRFESQLGFSVTETTQAAIEKHAALLEKIAIERIHVEFMKLMQGIERQNGLRTFIDTGLYRYCPDLADQLLALERLTALPTEQLHDESAVWLVVTYLLGQTPAQAGRFLKHWKSANDVIDAVKAGLVLLPKLLTATADQWDLYQAGQAVLVISLQIAQMVTTATIPTADWLERYDRLQIKQKADLAINGQILMQNGFQPGPILGKALAILERKVVLDELPNTTEALLKAAK", - "output": "ATP binding ; CCA tRNA nucleotidyltransferase activity ; magnesium ion binding ; tRNA binding ; RNA repair ; tRNA 3'-terminal CCA addition" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MSNGAFDAIFEYAWGQIDKPISGDFIYGKDLPKLIEIIENIFQKAQKSGSYELRLPLFSEINKDLFRTFSNTKTFFKIHKEEFDDIFFNLVNHPLREILENAFIGVDSIPSDFIVSMNLNSPSKFLVENKNKNTEGAGISTPRKKLTESPIKLLSRXNIGKALEVQVEELKRELTAKQSLLQENERQVSELKIRLETYQEKYASIQQRFSDLQKARQVEDNQNSSRTSDPGSPLVTGIDQKAILEEFRRRLQRQTDTISFLKDQIRRERGLNCSNDKVSHSKRKHATTDGDGTFKNFISAVPSNIWVKATIRIIVCFALLAGVLPYIRKYVYAHDTPSQNSRLQLSWWENSGILSKIVWFFEDQTDLETEYRSNANVDDAYSRVFGI", - "output": "cytoplasm ; nuclear membrane ; spindle pole body ; protein localization to spindle pole body ; spindle pole body duplication" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MNLIYNFSAGPAMIPRDVLNQAKKELHNWKNLGSSIMEISHRSEEFIQMALEAEKDLRDLLKIPDSFKVLFCQGGARGQFSAIPMNLLNNLQTADYINSGYWSNSAFMEAKKYCTPRSIFIRETNGVKESLLPMHKWNINENSAYIHYCPNETIDGLSIYEEPVFENKIIVGDFSSFILSRSINIKNYDLIYAGAQKNIGPAGITIIIIRKNIIGSSSKMTPSILDYKKISDHHSMFNTPPTFAWYLSGLVFKWLKKQGGLKAIEKLNKKKSDLLYKKIDNSDFYINKINSKHRSQMNVVFHLVNPKLNYIFLKEASKTGLNYLRGHSIVGGMRASLYNAMPLEGVESLVKFMSYFEKRYG", - "output": "cytoplasm ; O-phospho-L-serine:2-oxoglutarate aminotransferase activity ; pyridoxal phosphate binding ; L-serine biosynthetic process ; pyridoxine biosynthetic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MANEFLFTSESVSEGHPDKVADQISDGVLDAILAEDPKARVACETLVSTGLVVISGEITTSAHPNYREIAQDVVRRIGYDNSDIGFDYKSCAVLAAINRQSSDIAQGVNEGEGLDLDQGAGDQGLMFGYATNETPSLMPLPIYYAHRIMQRQAEVRKDGRLPWLRPDAKSQLTVKYVDGKPVAIDTVVVSTQHNPEVSHAQISEAVIEEIIKPVLPKELMQGEVRYLINPTGRFVIGGPHGDCGLTGRKIIVDTYGGAAHHGGGAFSGKDPSKVDRSAAYAGRYVAKNVVAAGLADKCEVQVAYAIGVAKPVSLMVNTFGTGKIADDKIVDLIRAHFDLRPKAIIQTLDLLRPIYSRTAAYGHFGRDEPEFTWEQTDKASALRAAAGL", - "output": "cytoplasm ; ATP binding ; magnesium ion binding ; methionine adenosyltransferase activity ; one-carbon metabolic process ; S-adenosylmethionine biosynthetic process" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MLTLDQARSKMLEQLPFPTQTEYLNLQEAANRICAEDIISPINVPSFDNSAMDGYAVRLSDLQQSLTLSVAGKSFAGNPFQEEWPSKSAVRIMTGAMIPEGTDAVIMQEQVTLNEDGTITFSELPKPNQNIRRIGEDVKKGDVVLEQGAQLTPVSLPLLASLGIAEVKCYRQLKVGVLSTGDELVEVGKPLQSGQIYDTNRFTVKLLLEKLHCEVIDLGLLPDNEAEFEKAFIAAQSQADLVITSGGVSVGEADFTKAVLEKVGQVNFWKIAIKPGKPFAFGKLENAWFCGLPGNPVSALVTFYQLVQPLIAKLQGQKQWKKPPHFSAIATMNLKKAVGRLDFQRGFYYINEQGQIEVQSVGFQGSHLFSAFVKSNCFIVLEQERGNVSAGETVTIEPFNHLLG", - "output": "cytoplasm ; cytosol ; metal ion binding ; molybdopterin molybdotransferase activity ; Mo-molybdopterin cofactor biosynthetic process ; molybdenum incorporation into molybdenum-molybdopterin complex" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MASRAPLELLPLNRSQLSPPNATTCDDAPEAWDLLHRVLPSVIIIICVCGLLGNLLVLAVLLRPRRRLNVAEMYLANLAASDLVFVLGLPFWAANISNQFRWPFGGLLCRLVNGVIKANLFISIFLVVAISRDRYRALVHPMATRRRRQARATCVLIWVAGSLLSVPTFLFRSIEAVPELNNDSACVLLHPPGAWHVARMVELNVLGFLLPLAAIVFFNCHILASLRGRPEVRGARCGGPPDGRTTALILTFVAAFLVCWTPYHFFAFLEFLTQVQVVRGCFWENFKDLGLQYASFFAFINSCLNPVIYVFVGRLFRTRVWDLFKQCAPRRPPAVSWSHRKRVLQLFWQN", - "output": "plasma membrane ; bradykinin receptor activity ; peptide binding ; G protein-coupled receptor signaling pathway ; inflammatory response ; response to lipopolysaccharide ; response to mechanical stimulus" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MKMIKVKVIGRNIEKEIEWREGMKVRDILRAVGFNTESAIAKVNGKVVLEDDEVKDGDFVEVIPVVSGG", - "output": "nucleotide binding" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MQYRDLRDFIRELEKRGELKRIQTPVSPILEMTEICDRTLRKGGPALLFEKPTGFDVPVLGNLFGTPKRVALGMGAEDVAELREIGKLLAFLKEPEPPKGLKDAWSKLPIFKKVISMAPKVVKDAPCHEVIEEGEDVDLNRLPIQHCWPGDVAPLITWGLTITKGPNKERQNLGIYRQQVIGRNKVIMRWLSHRGGALDYREWCQKYPDKPYPVCVALGADPATILGAVTPVPDTLSEYAFAGLLRGHRTELIKAVGSDLQVPASAEIVLEGVIHPGETAPEGPYGDHTGYYNEVDTFPVFTVERITRRREPIYHSTYTGRPPDEPAILGVALNEVFVPILQKQFPEITDFYLPPEGCSYRMAVVTMKKQYPGHAKRVMLGVWSFLRQFMYTKFVIVTDDDINARDWNDVIWAITTRMDPKRDTVMIDNTPIDYLDFASPISGLGSKMGLDATHKWPGETSREWGRAIEKDPAVVARVDALWGELGID", - "output": "plasma membrane ; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity ; metal ion binding ; ubiquinone biosynthetic process" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MTDIIRSDAATLAAKIAIKEVSSTEITRACLDQIEATDETYHAFLHVAADEALAAAAAVDKQVAAGEPLPSALAGVPLALKDVFTTSDMPTTCGSKILEGWRSPYDATLTARLRAAGIPILGKTNMDEFAMGSSTENSAYGPTRNPWNLDRVPGGSGGGSAAALAAFQAPLAIGSDTGGSIRQPAALTATVGVKPTYGTVSRYGLVACASSLDQGGPCARTVLDTALLHQVIAGHDPRDSTSVDAEVPDVVGAARAGAVGDLRGVRVGVVRQLHGGEGYQPGVLASFEAAVEQLTALGAEVSEVDCPHFDHALAAYYLILPSEVSSNLARFDAMRYGLRVGDDGTRSAEEVMAMTRAAGFGPEVKRRIMIGTYALSAGYYDAYYNQAQKVRTLIARDLDAAYRSVDVLVSPTTPTTAFRLGEKVDDPLAMYLFDLCTLPLNLAGHCGMSVPSGLSPDDGLPVGLQIMAPALADDRLYRVGAAYEAARGPLLSAI", - "output": "glutamyl-tRNA(Gln) amidotransferase complex ; ATP binding ; glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity ; translation" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "RLVLEVXASVEADV", - "output": "extracellular region ; toxin activity ; vasodilation" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MEALILEPSLYTVKAILILDNDGDRLFAKYYDDTYPSVKEQKAFEKNIFNKTHRTDSEIALLEGLTVVYKSSIDLYFYVIGSSYENELMLMTVLNCLFDSLSQMLRKNVEKRALLENMEGLFLAVDEIVDGGVILESDPQQVVHRVALRGEDVPLTEQTVSQVLQSAKEQIKWSLLR", - "output": "COPI vesicle coat ; Golgi membrane ; intra-Golgi vesicle-mediated transport ; intracellular protein transport ; retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum ; toxin transport" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MPKCPIPIRISFFSYFLKESRILSSNPVNFSIHLRFSSSVSVSPNPSMEVVENPLEAPISEKMFKSAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINAAIDKCWRNLCT", - "output": "embryo development ending in seed dormancy" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MWERLNCAAEDFYSRLLQKFNEEKKGIRKDPFLYEADVQVQLISKGQPNPLKNILNENDIVFIVEKVPLEKEETSHIEELQSEETAISDFSTGENVGPLALPVGKARQLIGLYTMAHNPNMTHLKINLPVTALPPLWVRCDSSDPEGTCWLGAELITTNNSITGIVLYVVSCKADKNYSVNLENLKNLHKKRHHLSTVTSKGFAQYELFKSSALDDTITASQTAIALDISWSPADEILQIPPLSSTATLNIKVESGEPRGPLNHLYRELKFLLVLADGLRTGVTEWLEPLEAKSAVELVQEFLNDLNKLDGFGDSTKKDTEVETLKHDTAAVDRSVKRLFKVRSDLDFAEQLWCKMSSSVISYQDLVKCFTLIIQSLQRGDIQPWLHSGSNSLLSKLIHQSYHGTMDTVSLSGTIPVQMLLEIGLDKLKKDYISFFIGQELASLNHLEYFIAPSVDIQEQVYRVQKLHHILEILVSCMPFIKSQHELLFSLTQICIKYYKQNPLDEQHIFQLPVRPTAVKNLYQSEKPQKWRVEIYSGQKKIKTVWQLSDSSPIDHLNFHKPDFSELTLNGSLEERIFFTNMVTCSQVHFK", - "output": "RZZ complex ; cell division ; mitotic spindle assembly checkpoint signaling" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MKVTQASCHQGDIARFGARAGNQCVCNGIMFLHALHLGGTSAVLQTEALDAIMEEGARLDARLERELQKKLPAGGRLPVYRLGDEVPRRLESRFGRTVHALSRPFNGTTETCDLDGYMCPGIFDFLRYAHAKPRPTYVLVTVNSLARAVVFTEDHMLVFDPHSSAECHNAAVYHCEGLHQVLMVLTGFGVQLSPAFYYEALFLYMLDVATVPEAEIAARLVSTYRDRDIDLTGVVRESADTAATTTTAAPSLPPLPDPIVDPGCPPGVAPSIPVYDPSSSPKKTPEKRRKDLSGSKHGGKKKPPSTTSKTLATASSSPSAIAAASSSSAVPPSYSCGEGALPALGRYQQLVDEVEQELKALTLPPLPANTSAWTLHAAGTESGANAATATAPSFDEAFLTDRLQQLIIHAVNQRSCLRRPCGPQSAAQQAVRAYLGLSKKLDAFLLNWLHHGLDLQRMHDYLSHKTTKGTYSTLDRALLEKMQVVFDPYGRQHGPALIAWVEEMLRYVESKPTNELSQRLQRFVTKRPMPVSDSFVCLRPVDFQRLTQVIEQRRRVLQRQREEYHGVYEHLAGLITSIDIHDLDASDLNRREILKALQPLDDNAKQELFRLGNAKMLELQMDLDRLSTQLLTRVHNHILNGFLPVEDLKQMERVVEQVLRLFYDLRDLKLCDGSYEEGFVVIREQLSYLMTGTVRDNVPLLQEILQLRHAYQQATQQNEGRLTQIHDLLHVIETLVRDPGSRGSALTLALVQEQLAQLEALGGLQLPEVQQRLQNAQLALSRLYEEEEETQRFLDGLSYDDPPNEQTIKRHPQLREMLRRDEQTRLRLINAVLSMFHTLVMRLARDESPRPTFFDAVSLLLQQLPPDSHEREDLRAANATYAQMVKKLEQIEKAGTGASEKRFQALRELVYFFRNHEYFFQHMVGRLGVGPQVTELYERYQHEMEEQHLERLEREWQEEAGKLTVTSVEDVQRVLARAPSHRVMHQMQQTLTTKMQDFLDKEKRKQEEQQRQLLDGYQKKVQQDLQRVVDAVKGEMLSTIPHQPLEATLELLLGLDQRAQPLLDKFNQDLLSALQQLSKKLDGRINECLHGVLTGDVERRCHPHREAAMQTQASLNHLDQILGPQLLIHETQQALQHAVHQAQFIEKCQQGDPTTAITGSEFEGDFARYRSSQQKMEEQLQETRQQMTETSERLDRSLRQDPGSSSVTRVPEKPFKGQELAGRITPPPADFQQPVFKTLLDQQADAARKALSDEADLLNQKVQTQLRQRDEQLSTAQNLWTDLVTRHKMSGGLDVTTPDAKALMEKPLETLRELLGKATQQLPYLSAERTVRWMLAFLEEALAQITADPTHPHHGSRTHYRNLQQQAVESAVTLAHQIEQNAACENFIAQHQEATANGASTPRVDMVQAVEAVWQRLEPGRVAGGAARHQKVQELLQRLGQTLGDLELQETLATEYFALLHGIQTFSYGLDFRSQLEKIRDLRTRFAELAKRRGTRLSNEGVLPNPRKPQATTSLGAFTRGLNALERHVQLGHQYLLNKLNGSSLVYRLEDIPSVLPATHETDPALIMRDRLRRLCFARHHDTFLEVVDVFGMRQIVTQAGEPIHLVTDYGNVAFKYLALRDDGRPLAWRRRCSGGGLKNVVTTRYKAITVAVAVCQTLRTFWPQISQYDLRPYLTQHQSHTHPAETHTLHNLKLFCYLVSTAWHQRIDTQQELTAADRVGSGEGGDVGEQRPGRGTVLRLSLQEFCVLIAALYPEYIYTVLKYPVQMSLPSLTAHLHQDVIHAVVNNTHKMPPDHLPEQVKAFCITPTQWPAMQLNKLFWENKLVQQLCQVGPQKSTPPLGKLWLYAMATLVFPQDMLQCLWLELKPQYAETYASVSELVQTLFQIFTQQCEMVTEGYTQPQLPTGEPVLQMIRVPRQDTTTTDTNTTTEPGLLDVFIQTETALDYALGSWLFGIPVCLGVHVADLLKGQRILVARHLEYTSRDRDFLRIQRSRDLNLSQLLQDTWTETPLEHCWLQAQIRRLRDYLRFPTRLEFIPLVIYNAQDHTVVRVLRPPSTFEQDHSRLVLDEAFPTFPLYDQDDNSSADNIAASGAAPTPPVPFNRVPVNIQFLRENPPPIARVQQPPRRHRHRAAAAADDDGQIDHVQDDTSRTADSALVSTAFGGSVFQENRLGETPLCRDELVAVAPGAASTSFASPPITVLTQNVLSALEILRLVRLDLRQLAQSVQDTIQHMRFLYLL", - "output": "host cell cytoplasm ; host cell nucleus ; viral tegument ; cysteine-type deubiquitinase activity ; modulation by symbiont of host protein ubiquitination ; proteolysis" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MVATCLQVVGFVTSFVGWIGIIVTTSTNDWVVTCSYTIPTCRKMDELGSKGLWADCVMATGLHHCKPLVDILILPGYAQACRALMIAASVLGLPGILLLLTVLPCIRMGHEPGVAKYRRAQLAGVLLILLALCAIVATIWFPVCAHREITIVSFGYSLYAGWIGAVMCLVGGCVIVCCSGDAQSFGENRFYYSSGSSSPTHAKSAHV", - "output": "axon ; basal part of cell ; bicellular tight junction ; neurofilament ; plasma membrane ; tight junction ; identical protein binding ; structural molecule activity ; axon ensheathment ; bicellular tight junction assembly ; calcium-independent cell-cell adhesion via plasma membrane cell-adhesion molecules ; cell adhesion ; spermatogenesis ; tight junction assembly" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MASINDNYLKLKAGYLFPEIARRVNAFTTANPNAQVIKLGIGDVTEPLPLACRQAMAKAIDDMGDRQTFKGYGPEQGYAWLREKIAQHDFQARGCEVNAEEIFISDGSKCDTGNILDIFGKDNTIAVTDPVYPVYVDTNVMAGHTGDANEKGEYGGLVYLPISAENDFVAAIPSKKVDLIYLCFPNNPTGATATKAYLKQWVDYALAHGSIIFFDAAYEAFITDPTLPHSIYEIEGARDCAIEFRSFSKNAGFTGTRCALTVVPKTLTAKAADGSDVELWKLWNRRQSTKFNGVSYIIQRGAEAVYSPEGQAQVQELIAFYLENARIIREKLAAAGLQVYGGINAPYVWVKTPHGLSSWDFFDKLLHTVNVVGTPGSGFGAAGEGYFRISAFNSRANVEEAMERITSTLKLG", - "output": "L,L-diaminopimelate aminotransferase activity ; pyridoxal phosphate binding ; lysine biosynthetic process via diaminopimelate, diaminopimelate-aminotransferase pathway" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MPKGSGKVLSQNKKANHDYFIEETYETGIVLQGTEIKSIRAGRVNMKDSFAKIERGEVFLHNMHISPYEQGNRYNHDPLRTRKLLMHRKEINKLIGLTKEKGYSLVPLKLYLKNGFAKVLIGLGKGKKTYDKREDLKRKDAKREIERAFRDRQKGF", - "output": "cytoplasm ; RNA binding ; trans-translation" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MNITQAYKRSLWWSMDMVGATGSVERKMLTAVGLQFLAAGGMAFLTVFTAGTVQLIGVGGMLALSVVAFYNTYLIAEADFVEPLVALEDAADDIAAGEFERADIPSSKRDDEIASLVASFDGMQSNLEVASRQADALARQAFDDPALDESVPGAFGESITEMADSLEAYTAELEDKTAELEHQQAELERQSEQLRALVDALSEATDAARAGDLTATVDAAALDVTDDHRAAVEDFNQLLETLADTISDIQSFSDAVLAVSRTTDERVDAVADRSAAVSESVTEIADGANQQTNQLNNIAAEMDTVSATVEEIAASANDVAKTAQAAADRGEDGRGEVEETIEALRALREQSQAVAETVESLAAEVERIDGITALIEDIAEETNMLALNASIEAARTGSDGDGFAVVADEVKDLAEETREQAADISEIVDAVTEKAEDASIAIGEVDAEVERKITKAEGVLRDFEAIVDEVANVNHAVQEISDATDQGAQSVTDVVGMVEEVASVSEETAAESDTVADNAAEQTDATDEVADQMDELAEQTAALAGMLDDFTVPADAGTADQSVADDSPTAQPPAADDEPAAAVVDQPQPASDAEDEEGVPDSGGESVAVSDGGWADDRSSFTWADSQ", - "output": "plasma membrane ; transmembrane signaling receptor activity ; chemotaxis ; signal transduction" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MDSRTGELLTYTQCQTGCYFDDIKNPIYFRLQNTTTMATGNKIITLQIRANHNLRKVLGLQICWLNLVVLSVSPRLSGEALLDRFKFHVMKHLNNLGVISINNVIRSINHFIDLFDQRVFYAPSFYYNIKMRLY", - "output": "viral process" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MGIRVYKPTTNGRRNMTSLDFAEITTSTPEKSLLVALKSKAGRNNNGRITVRHQGGGHKRFYRLVDFKRNKDNVEAVVKTIEYDPNRSANIALVHYTDGVKAYIIAPKGLEVGQRIVSGPEADIKVGNALPLANIPVGTLIHNIELKPGRGGELVRAAGASAQVLGSEGKYVLVRLQSGEVRMILGTCRATVGVVGNEQHGLVNLGKAGRSRWKGIRPTVRGSVMNPNDHPHGGGEGKAPVGRKAPSTPWGKPALGLKTRNKKAKSDKLIVRRRNEK", - "output": "large ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; transferase activity ; translation" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MLSKTHIMFIPFPAQGHMSPMMQFAKRLAWKGVRITIVLPAQIRDSMQITNSLINTECISFDFDKDDGMPYSMQAYMGVVKLKVTNKLSDLLEKQKTNGYPVNLLVVDSLYPSRVEMCHQLGVKGAPFFTHSCAVGAIYYNAHLGKLKIPPEEGLTSVSLPSIPLLGRDDLPIIRTGTFPDLFEHLGNQFSDLDKADWIFFNTFDKLENEEAKWLSSQWPITSIGPLIPSMYLDKQLPNDKGNGINLYKADVGSCIKWLDAKDPGSVVYASFGSVKHNFGDDYMDEVAWGLLHSKYNFIWVVIEPERTKLSSDFLAEAEEKGLIVSWCPQLEVLSHKSIGSFMTHCGWNSTVEALSLGVPMVAVPQQFDQPVNAKYIVDVWQIGVRVPIGEDGVVLRGEVANCIKDVMEGEIGDELRGNALKWKGLAVEAMEKGGSSDKNIDEFISKLVSS", - "output": "UDP-glycosyltransferase activity ; response to molecule of fungal origin ; saponin biosynthetic process ; terpene biosynthetic process ; terpenoid biosynthetic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MCERSLYRAGYVGSLLNLQSPDSFYFSNLRPNGGQLAALPPISYPRGALPWAATPASCAPAQPAGATAFGGFSQPYLAGSGPLGLQPPTAKDGPEEQAKFYAPEAAAGPEERGRTRPSFAPESSLAPAVAALKAAKYDYAGVGRATPGSTTLLQGAPCAPGFKDDTKGPLNLNMTVQAAGVASCLRPSLPDGLPWGAAPGRARKKRKPYTKQQIAELENEFLVNEFINRQKRKELSNRLNLSDQQVKIWFQNRRMKKKRVVLREQALALY", - "output": "chromatin ; nucleus ; transcription regulator complex ; DNA-binding transcription factor activity, RNA polymerase II-specific ; sequence-specific double-stranded DNA binding ; embryonic digit morphogenesis ; pattern specification process ; skeletal system development" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MKALLDLFKQVQQEEVFDAIKIGLASPDKIRSWSFGEVKKPETINYRTFKPERDGLFCAKIFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTLAKVRRERMGHIELASPVAHIWFLKSLPSRLGMVLDMTLRDIERVLYFEAYVVIEPGMTPLKARQIMTEEDYYNKVEEYGDEFRAEMGAEGVRELLRAINIDEQVETLRTELKNTGSEAKIKKYAKRLKVLEAFQRSGIKPEWMILEVLPVLPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELKAPEIIVRNEKRMLQEAVDSLLDNGRRGKAMTGANKRPLKSLADMIKGKGGRFRQNLLGKRVDYSGRSVIVVGPTLKLHQCGLPKLMALELFKPFIFNKLEVMGVATTIKAAKKEVENQTPVVWDILEEVIREHPVMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQMEARTLMLASNNVLFPANGDPSIVPSQDIVLGLYYATREAVNGKGEGLSFTGVSEVIRAYENKEVELASRVNVRITEMVHNEDKSEGAPPFVPKITLYATTVGRAILSEILPHGLPFSVLNKPLKKKEISRLINTAFRKCGLRATVVFADQLMQSGFRLATRAGISICVDDMLVPPQKETIVGDAAKKVKEYDRQYMSGLVTAQERYNNVVDIWSATSEAVGKAMMEQLSTEPVTDRDGNETRQESFNSIYMMADSGARGSAVQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGARKGLADTALKTANSGYLTRRLVDVTQDLVVVEDDCGTSNGVAMKALVEGGEVVEALRDRILGRVAVADVVNPETQETLYESGTLLDETAVEEIERLGIDEVRVRTPLTCETRYGLCAACYGRDLGRGSLVNVGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAVASSVEAKSNGIVRFTATMRYVTNAKGEQIVISRSGEAMITDDFGRERERHKVPYGATLLQLDGATIKAGTQLATWDPLTRPIITEYGGTVKFENVEEGVTVAKQIDDVTGLSTLVVIDVKRRGSQASKSVRPQVKLLDANGEEVKIPGTEHAVQIGFQVGALITVKDGQQVQVGEVLARIPTEAQKTRDITGGLPRVAELFEARSPKDAGILAEVTGTTSFGKDTKGKQRLVITDLEGNQHEFLIAKEKQVLVHDAQVVNKGEMIVDGPADPHDILRLQGIEALSRYIVDEVQDVYRLQGVKINDKHIEVIVRQMLRRVQITDNGDTRFIPGEQVERSDMLDENDRMIAEGKRPASYDNVLLGITKASLSTDSFISAASFQETTRVLTEAAIMGKRDDLRGLKENVIVGRLIPAGTGLAFHKARKAKESSDRERFDQIAAEEAFDFGTPSAPAEEPQHPAAE", - "output": "DNA-directed RNA polymerase complex ; DNA binding ; DNA-directed 5'-3' RNA polymerase activity ; magnesium ion binding ; zinc ion binding ; DNA-templated transcription" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MTMPYYASAEQIMRDRSELARKGIARGRSVVVLTYRDGVLFVAENPSRALHKVSELYDRLGFAAVGKYNEFENLRRAGIVHADMRGYSYDRRDVTGRSLANAYAQTLGTIFTEQPKPYEVEICVAEIGRFGSSTPAQLYRITYDGSIADEQEFVVMGGTTEPIVTAMRESYQRDLDLESAVRLAVGALQKGGPAPAGTTEAEPRTLDVSALEVAVLDSNRPRRAFKRIAGSALEEMLPTPAATEDAPANGDAPS", - "output": "cytoplasm ; proteasome core complex, alpha-subunit complex ; threonine-type endopeptidase activity ; modification-dependent protein catabolic process ; proteasomal protein catabolic process" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MESFSSKSLALQAEKKLLSKMAGRSVAHLFIDETSSEVLDELYRVSKEYTHSRPKAQRVIKDLIKVAVKVAVLHRSGCFGPGELALATRFRQKLRQGAMTALSFGEVDFTFEAAVLAGLLVECRDILLELVEHHLTPKSHDRIRHVFDHYSDPDLLAALYGPDFTQHLGKICDGLRKLLDEGKL", - "output": "cytoplasm ; innate immune response ; negative regulation of inflammatory response ; negative regulation of T cell activation ; regulation of apoptotic process ; T cell activation" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVLDKLKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGEFEAGISKDGQTREHALLAYTLGVKQLIVAVNKMDTTGWSQARFEEIVKETSNFIKKVGFNPKTVPFVPVSGFQGDNMIEPTTNMPWYQGWQKETKAGVVKGKTLLEAIDSIEPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMIVTFAPAGVTTEVKSVEMHHESLDAGLPGDNVGFNVKNVSVKDIRRGNVCGDSKNDPPMGCASFTAQVIILNHPGQISAGYSPVLDCHTAHIACKFAELIEKIDRRSGKKIEESPKFVKSGDACIAKMVPSKPMCVEAFTDYAPLGRFAVRDMRQTVAVGVIKAVEKVAPGAAKVTKAAVKAGAKK", - "output": "cytoplasm ; cytosol ; eukaryotic translation elongation factor 1 complex ; calmodulin binding ; GTP binding ; GTPase activity ; translation elongation factor activity ; cytoplasmic translational elongation ; translation ; translational elongation" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MYSLARPLLFSLDAERAHALALRSIDTAYRTGTTSLLSTRPVPLPTPAFGLMFPNPVGLGAGLDKNGEHIDALLALGFGFVEIGTVTPRAQDGNPKPRMFRLPEYQAVINRMGFNNLGVDALVANVQRARRRGGLLGINIGKNKDTPNEEATSDYRYCMERVYPLADYITVNISSPNTAGLRELQEEQSLRRLISDLRETQEALGAQHGKRVPMLVKVAPDLNDRDIDAAARVLADLAVDGVIATNTTVTRPLIANHPLAAEAGGLSGAPLLGQSTLVLRRLRARLPESIPLIGVGGINSGADAVAKMAAGASLVQCYSGLVYRGPQLVGECVNAIRRRREAPSSGAVAPL", - "output": "cytoplasm ; plasma membrane ; dihydroorotate dehydrogenase (quinone) activity ; 'de novo' pyrimidine nucleobase biosynthetic process ; 'de novo' UMP biosynthetic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MDLVRGLWRKHRRKILVTTTCLGSGYLLYKLYNAHTRKLADLERELANERENDEIIKTQMKAHFDNIQMIADTTTLPHAIHHLSSRVVEEIDVSSIMDKLSKGKGILIPSEKLQLWNELKILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYIDTARGLGSSHLLDELDLIERDDEQKFLTSADFLATSGMPSLISNMQNAVKEVLKGKQLKDVLTTSALRETVMRILDVFMSTGSPHHWVDYLMMSQDATTDVSSSDATVTKFHLLITETREVLTSNDFSNVAEISLKCCAVALVEEMETQTGLATGMQLAKLLPQIEKTMPEISAEPEKNRFLQLIRDLPEVKLFFTLLYANMPQ", - "output": "peroxisomal membrane ; protein-macromolecule adaptor activity ; protein import into peroxisome membrane" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MEPKRIREGYLVKRGSVFNTWKPMWVVLLEDGIEFYKKKSDNSPKGMIPLKGSTLTSPCQDFGKRMFVFKITTTKQQDHFFQAAFLEERDSWVRDTKKAIKCIEGGQKFARKSTRRSIRLPETVDLGALYLSMKDIEKGIKELNLEKDKKIFNHCFTGNCVIDWLVSNKSVRNRQEGLMIASSLLGEGYLQPAGELSKNAADGMAEHPFLDNPDAFYYFPDSGFFCEENSSDDDVILKEEFRGVIIKQGCLLKQGHRRKNWKVRKFILREDPAYLHYYDPAAGGEEPLGAIHLRGCVVTSVESNPDVRKSEEENLFEIITADEVHYFLQAATPKERTEWIKAIQVASRTGK", - "output": "plasma membrane ; actin cytoskeleton reorganization ; intracellular signal transduction" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MYLEKLSLTDFRSYAQVDLTLEPGVTVLVGYNGIGKTNLMEAIGYLATLSSHRVSSDAPLLRFGTERALIRAKLVRGGQSTVLELEINGSRANRGRINRSNPVRARDILGICQTVLFAPEDLALVKGDPSNRRRFLDELLVSLMPRHSATRTDYDRVLKQRNALLKSGRSGKFTAGHEATLDVWDQHMARAGAELLYARLELVERIRPHLKAAYAQLTDGSKEADAIYRSTLQGILDDDGAGAGYAAEPAAVERVEDLRALSVEELTQRYVQAFAASRRKELERGISLVGPHRDDVELILGEAPAKGYASHGETWSMCLSLRLASYYVMLDDARTGGSAPILILDDVFAELDVQRRRKLAAIVSGAEQVLVTAAVDADIPDELAGRRVKVVPGGIDESESR", - "output": "cytoplasm ; ATP binding ; single-stranded DNA binding ; DNA repair ; DNA replication ; SOS response" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MQIVDRSNLEASLKLALSPENNPKRNFVQSVEIIVTFKEVDMKKGDLKLREIVVLPKPPEKTKKVLVVPTIQQLEYAKKAEPNTILTKEELQKLQGNKRAIKKIARQNDWFLIAPDSMALVGRILGPALGPRGKFPTPLPNTADISEYILRFKRSTLVKTKDQPQTQVFIGTESQQIADLAENALAVLNVIESKGYAQKVRNIYVKTTMGKVVKVELR", - "output": "large ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; tRNA binding ; regulation of translation ; translation" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MKNKNSEQNTHSTIGEQDIHYFHEGKHIYAYEFMGAHKACEEGIEGIRFTTWAPNAKSICVIGDFNYWQVEDKNYMEPITDAGLWSVFIPNAKNGDKYKFVVTNKDTNNYVYKSDPYAFFSELRPNTASIITTETQYTWSDDKWLEKRAKTNYYDNPMNVYELHLASWKTKNGKFLTYDELNETLPQYIKEMGYTHVEFMPLHEHPLDASWGYQPTGFYSVNSRHGDIIGLKRLVDKLHNNDIGVILDWVPGHFCKDQHGLIYFDGSPCYEYQEPTKAINKGWGTHNFDLGRNEVKCFLISNAMYWINEFHIDGLRVDAVSNILYLNYDREDGQWIPNIYGGHENLEGIAFLKELNGVLKHTCKGVITIAEESSSWPDISTPVEKGGLGFDFKWNMGWMNDTLRYISLDPVYRKYHHNLITFSMVYHYSEKFILSISHDEVVHGKKSLINKMWGDLWNKYAGLRLYMSYMIGHPGKKLIFMGSEFVQFVEWREYEQLQWQVVDQYESHKQTLHFFKKLNDLYHNETALWQCDYDHHGFRWIDADNSQQSILSFIRSSKDNKQKLIFICNFTPVTYYDYHLGVPDAGSYKEVFNSDNLEFGGSGQVMATEIFSSPQSSHGFEQRITIKIPPMATLVLKLIK", - "output": "1,4-alpha-glucan branching enzyme activity ; 1,4-alpha-glucan branching enzyme activity (using a glucosylated glycogenin as primer for glycogen synthesis) ; cation binding ; hydrolase activity, hydrolyzing O-glycosyl compounds ; glycogen biosynthetic process" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MARIAGVNIPTAKRVPIALTYIHGIGNHVAEQICDAVGIDRARRVNQLSDAEVLAIREYIDANVTVEGDLRRETSMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGKKK", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; tRNA binding ; translation" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MVNRLILMVVVVFITDSVMGTAEVMSHVTAHFGKALEECREESGLPVEVMDEFKHFWREDFEVVHRELGCAIICMSNKFELLQDDTRIHHVKMHDYIKSFPNGQVLSEKMVQLIHNCEKQYDDIADDCDRVVKVAACFKKDAKKEGIAPEVAMIEAVIEKY", - "output": "odorant binding ; response to stimulus ; sensory perception of smell" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MSDSDSEFSIEDSPKKKTAPKKEKASPKKKKDDANESMVMTEEDRNVFTSIDKKGGGSKQMAIEDIYQKKSQLEHILLRPDTYIGSVEHTEKTPMWVYNMEESKLEQRDISYVPGLYKIYDEILVNAADNKQRDPKMNTIKITINKEKNEISVYNNGKGIPVTQHKVEKVYVPELIFGTLLTSSNYNDDEKKVTGGRNGYGAKLCNIFSTKFTLETSSRDYKSAFKQTWIKNMTRDEEPKIVKSTDEDFTKITFSPDLAKFKMKELDDDICHLMARRAYDVAGSSKGVAVFLNGKRIPIKGFEDYVQMYTSQFNNEGEPLKIAYEQVGDRWQVALALSEKGFQQVSFVNSIATTKGGRHVDYVADQMVAKFIDSIKRKLTKTSMNIKPFQIKNHMWVFVNCLIENPTFDSQTKETMTLQQKQFGSTCVLSEKFSKAASSVGITDAVMSWVRFKQMDDLNKKCSKTKTSKLKGIPKLEDANDAGTKNSQQCTLILTEGDSAKTLAVSGLSVVGRDKYGVFPLRGKLLNVREGNMKQIADNAEVNAMIKILGLQYKKKYETEDDFKTLRYGKLMVMADQDQDGSHIKGLVINFIHHFWPSLIQRNFVEEFITPIVKATKGKEEVSFYSLPEYSEWRMNTDNWKSYKIKYYKGLGTSTSKEAKEYFLDMVRHRIRFKYNGADDDNAVDMAFSKKKIEERKDWLSKWMREKKDRKQQGLAEEYLYNKDTRFVTFKDFVNRELVLFSNLDNERSIPCLVDGFKPGQRKVLFACFKRADKREVKVAQLAGAVAEISAYHHGEQSLMGTIVNLAQDYVGSNNINLLLPIGQFGTRLQGGKDSASARYIFTQLSPVTRTLFPAHDDNVLRFLYEENQRIEPEWYCPIIPMVLVNGAQGIGTGWSTNIPNYNPRELVKNIKRLIAGEPQKALAPWYKNFRGKIIQIDPSRFACYGEVAVLDDNTIEITELPIKQWTQDYKEKVLEGLMESSDKKSPVIVDYKEYHTDTTVKFVVKLSPGKLRELERGQDLHQVFKLQAVINTTCMVLFDAAGCLRTYTSPEAITQEFYDSRQEKYVQRKEYLLGVLQAQSKRLTNQARFILAKINNEIVLENKKKAAIVDVLIKMKFDADPVKKWKEEQKLKELRESGEIELDEDDLAAVAVEEDEAISSAAKAVETKLSDYDYLVGMALIKLSEEEKNKLIKESEEKMAEVRVIEKKTWQDLWHEDLDNFVSELDKQEAREKADQDASIKNAAKKLAADAKTGRGPKKNVCTEVLPSKDGQRIEPMLDAATKAKYEKMSQPKKERVKKEPKEPKEPKKVKKEGQDIKKFMSPAAPKTAKKEKSDGFNSDMSEESDVEFDEGIDFDSDDDGVEREDVVSKPKPRTGKGAAKAEVIDLSDDDEVPAKKPAPAKKAAPKKKKSEFSDLSGGDSDEEAEKKPSTSKKPSPKKAAPKTAEPKSKAVTDFFGASKKNGKKAAGSDDEDDESFVVAPREKSGRARKAPPTYDVDSGSDSDQPKKKRGRVVDSDSD", - "output": "chromosome ; cytoplasm ; nucleoplasm ; nucleus ; spindle ; ATP binding ; DNA binding ; DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity ; metal ion binding ; cell division ; DNA topological change ; mitotic sister chromatid segregation ; mitotic sister chromatid separation ; resolution of meiotic recombination intermediates ; sister chromatid segregation" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MAPAVAVVAAAAAFPFRLFSAEARRNTKGSRSKRGSARPLKPSPPPRPSASSSAAGGGGATTFTRLPLRNAPASVEVTLDRFPTANPEPRASTFTRRNGERLGDDEEDEEEEEDEVELGLRGATTFARLPLRDSPDGGDLTIGHFDAGVAPQEGLRSRAISRQLVEHLDDVEEEEEEQVVSRLDIFEGAKGREARAFLPDEDDEDDDVVVFDPEYDGYSDDEEFVATAVEQSPRGDAIAVAELEKLKYDNDDDDDDDDEVVVFHPDDDEEVDVFEDYDDDEEEETKEKGVPAVMRCFDTAKIYAKAGDGGNGVVAFRREKYVPLGGPSGGDGGRGGNVFVEVDGDMNSLLPFRKSVHFRAGRGAHGQGRQQAGAKGDDVVVKVPPGTVVRSAAGDVELLELMRPGQRALLLPGGRGGRGNAAFKSGTNKAPRIAEKGEKGPEMWIDLELKLVADVGIVGAPNAGKSTLLTAISAAKPTIANYPFTTLLPNLGVVSLDFDATMVVADLPGLLEGAHRGYGLGHEFLRHSERCSVLVHVVDGSGEQPEYEFEAVRLELELFSPSLVDKPYIVVYNKMDLPEASERWNKFQEKLQAEGIEPYCISAMNRQGTEDVVLAAYKVLQKDRQRMKDDEEWNGPENLNHVADAIKRERRAPMNEFEIFHDKGTNTWNVVGAGIERFVQMTNWQYSESLKRFQHALEACGVNKTLIKRGVKEGDTVVVGEMEMVWTDEPSKTRSSKTMNSKDDSVRWPEFG", - "output": "chloroplast ; GTP binding ; GTPase activity ; magnesium ion binding" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MTKADQIFKANIQKIINEGSLSEQARPKYKDGRTAHSKYITGAFAEYDLAKGEFPITTLRPIPIKSAIKELFWIYQDQSNSLDVLEAKYNVHYWNEWEVDQTRTIGQRYGAVVKKHDIISKILKQLAENPWNRRNVISLWDYEAFEETKGLLPCAFQIMFDVRRVGEDLYLDASLTQRSNDILVAHHINAMQYVALQMMFAKHFGWKIGKFFYFVNNLHIYDNQFDQAQELLKRQPVASQPKLVLNVPDGTNFFDIKPDDFELQNYDPVKPQLHFDLAI", - "output": "cytoplasm ; thymidylate synthase activity ; dTMP biosynthetic process ; dTTP biosynthetic process ; methylation" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MWIQQLLGLSSMSIRWPGRSLGSHAWILIAMLQLAVDFPSCDSLGPGPEFRLLSRPQRPQRLWSLRSGPPTRLPTPAWSPRAARAERAHGPIQMQTPRARRAHRPRDQVATLGPKGGLTKPPAATRSSPSLASATASSSIVTAGAAEHQGLLRRGRRHTHDTEFNDFDFRGGRPTTETEFIAWGPTGDEDALESNTFPGGFGPTTVSILQTRKTTVATTTTTTAASTATAMTLQTKGVTESLDPWKRTPVGVSTTEPSTSPSSNGKDIQPPRILGETSGLAVHQIITITVSLIMVIAALITTLVLKNCCAPSGHTRRNSHQRKMNQQEESCQNLTDFTPARVPSSVDIFTAYNETLQCSHECVRASVPVYADETLHSTGEYKSTFNGNRTSSADRHLIPVAFVSEKWFEISC", - "output": "adherens junction ; apical plasma membrane ; basolateral plasma membrane ; cell surface ; cell-cell contact zone ; cytoplasmic side of plasma membrane ; plasma membrane ; beta-catenin binding ; protein-containing complex binding ; cell adhesion ; negative regulation of cell-matrix adhesion ; negative regulation of wound healing ; regulation of polarized epithelial cell differentiation" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MKRIAFVFSTAPHGTAAGREGLDALLATSALTDDLTVFFIADGVFQLLSGQKPDAVLARDYIATFKLLGLYDIEQCWVCAASLRERGLDPQTPFVVEATPLEADALRRELANYDVILRF", - "output": "cytoplasm ; tRNA processing" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MIQFQRLHKSYSVDGRQIVALHPLDLRIGPGEVFGIIGHSGAGKSTLIRLINRLEEPSGGRLLIGDEDVTALDGQGLRALRRRIGMIFQHFNLLSSRTVAGNVAFPLELAGTPRAEIDARVAELLARVGLQEHANKYPAQLSGGQKQRVGIARALATRPQILLCDEATSALDPQTTASVLQLLAQINRELGLTIVLITHEMDVIRRVCDRVAVLDAGKLVETGPVTEVFLHPKHATTRRFVSEAEHVDEAELHRDFAAVGGRIVRLTFLGNGTYEPVLGRIARETGVDYNILSGRVDRIKDTPYGQLIVALTGGDQNAARAGFVAAGVQVEDLRV", - "output": "plasma membrane ; ABC-type D-methionine transporter activity ; ATP binding ; ATP hydrolysis activity" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MSGWRLLLTRPDEECAALAASLGEAGVHSSSLPLLAIDPLEETPEQRTLMLDLDRYCAVVVVSKPAARLGLERLDRYWPQPPQQTWCSVGAATAAILEAYGLDVTYPEQGDDSEALLALPAFQDSLRVHDPKVLIMRGEGGREFLAERLRGQGVQVDYLPLYRRRAPDYPAGELLARVRAERLNGLVVSSGQGLQNLYQLAAADWPEIGRLPLFVPSPRVAEMARELGAQRVIDCRGASAPALLAALTSAA", - "output": "uroporphyrinogen-III synthase activity ; protoporphyrinogen IX biosynthetic process ; uroporphyrinogen III biosynthetic process" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MNLMLQNLNNIRTLRAMAREFSIDVLEEMLEKFRVVTKERREEEELQQRQLAEKQEKINAFLELMKADGINPEELFAMDSAMPRSAKKRQPRPAKYRFTDFNGEEKTWTGQGRTPKPIAQALAAGKSLDDFLI", - "output": "cytosol ; nucleoid ; protein-DNA complex ; bent DNA binding ; DNA-binding transcription repressor activity ; minor groove of adenine-thymine-rich DNA binding ; protein dimerization activity ; structural constituent of chromatin ; transcription cis-regulatory region binding" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MNLIAKLEQEEIERALAGKTIPEFAPGDTVIVNVNVVEGNRKRVQAYEGVVIAKRNRGLNSSFIVRKISSGEGVERTFQTYSPLLASIVVKRRGDVRRAKLYYLRERSGKSARIKEKLVSKDRAAAAQQ", - "output": "ribonucleoprotein complex ; ribosome ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MPSQSRSRDRYRGRDTEYTRRRYPDEHDYSHDDHDYDYDDDDDDNDDLEQDVTERRYRRDGYRRPRGESRARAYYERDAAAAAAHDEELLAEERERRRAGASGSPRKSGQHRERDRDRERDREAQSRRRTYEDDGRHRTRDGRRERRREGGGEGGRRERRRGESRRGEAARKHQSSDSTNSASHLLSADALARLGSQYEKEDRRERAHAKDAAKAERKRRKKRAVVGEQERGLRAEKPRDRSRARVASGAYMEEGRGPEMEFRRRGGGGPPMDARWPKGGGWGGSVDGGDAGRPFWKQKKWLIGIGVVILILVIVIPVAVVVSKKHNDKPNATTTQPDGTTPSNSNLDGLSPDSIPGYAKGTFLDPWTWYDTNDFNVTFTNETVGGLSLMGLNSTWDDSARPNDNVPPLNKPFPYGKQPIRGVNLGGWLSLEPFITPSFFQSYSALSGVIDEYTLTQKLGSTAGARLEKHYATFITEQDFADIRDAGLDHVRIQYSYWAVTTYDGDPYVAKTSWRYLLRAIEYCRKYGLRVKLDPHGIPGSQNGWNHSGRQGAIGWLNGTDGELNRKRSLEVHDQVSKFFAQDRYKNVVTIYGLVNEPLMLSLSVEDVLNWTVEATKLVQKNGITAYIALHDGFLNLSKWKSILKTRPDNMLLDTHQYTIFNTGQIVLNHTARVNLICNDWSAMIKEVNSTSGFGPTICGEWSQADTDCAQYLNNVGRGTRWEGTFSLTDSTQYCPTADSGPRCSCANANADPSAYSADYKKFLQTYAEAQMSAFETGQGWFYWTWRTESAAQWSYRTAWKGGFMPQKAYSPSFKCGDTVPDFGSLPEYY", - "output": "plasma membrane ; glucan exo-1,3-beta-glucosidase activity ; cell wall organization ; polysaccharide catabolic process" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MSENPVKRPGKDGSRNKFKPVQEEGGTPGWFRSKGESPQGKFPGFLLFLMAGLLMLFVFLRFFSGTDAPEITYNEYKSVLSRALVTEVTVKTYEDKSAILSGKLNAPAQLQLIDKTTLQTNRFAVRVPSFTLEQADMLTEKGVRLKVEKGSSDLNTFLALFAPWIIFAALYFFLFRRMSGQNGAQAKNIFSFGKSRAKMVSEFEVKTTFKDVAGVDEAIEELQETVEFLTNPEKFQKIGGKIPKGVLLLGPPGTGKTLLAKAIAGEAKVPFFSISGADFVEMFVGVGAARVRDLFEQAKKNAPCIIFIDEIDAVGRSRGAGLGGGHDEREQTLNQLLVEMDGFTTNENVILIAATNRPDVLDSALLRPGRFDRQITIDKPDIRGREAILKIHTRNTPLDGDVDITVLAKSSPGFSGADLANLVNEAALLAARHEQVLITAVNFEQARDKILMGPERRSMFISDEQKKLTAYHEAGHVLVSIHTKGSDPIHKVTIIPRGRSLGLTAYLPLEDRYTHNREYLLAMITYALGGRVAEELVFQECSTGAANDIEKATDIARRMVRQWGMSESLGPINYGDSHKEVFLGKDYSHIREYSEETALQIDVEVRNIIMGCMENAKTVLSEQLAVLHRLAGILIEKESLNAREIQEITGPGQGALPNPVTA", - "output": "plasma membrane ; ATP binding ; ATP hydrolysis activity ; ATP-dependent peptidase activity ; metalloendopeptidase activity ; zinc ion binding ; protein catabolic process ; proteolysis" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MTEARPIILTCGEPAGVGPELAPKALASGVPFVFLGDPRHLPEGTAWAEVTAPGEPVADGVLAVLRHDFPAPARPGQPDPANAPAVIEVIARAVDLAMSGAAGGICTLPINKEALKRGAGFGFPGHTEYLAHLAGDVPVVMMLASTTVQPPCRVVPVTIHIPLSEVPLALTPLRLEQAIRITDAAMRRDFGLAQPRLAIAGLNPHAGENGVMGDEEARWMAPLIERLRREGFDLRGPLPADTMFHPAARARYDAALCAYHDQALIPIKTLDFAGGVNITLGLPFVRTSPDHGTAFDIAGQGIADAESVIAALRMAHEMAARR", - "output": "cytoplasm ; 4-hydroxythreonine-4-phosphate dehydrogenase activity ; cobalt ion binding ; magnesium ion binding ; NAD binding ; zinc ion binding ; pyridoxal phosphate biosynthetic process ; pyridoxine biosynthetic process" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MNHHEVHAVSAFAMSGFEQSLVFAIDGGGDFLSGLMAVGSGTVIAQLVSFPEHNSLGLFYLETIRYLGCGMFDEYKVMGLAPYGDPDRYRELFAQFYELLDSGGYRVHLDRIGPALLRNIQVRRKGMPFTQQHRDVSASLQEALERIVFHTLRHHRKATGMTRLCLAGGVAHNCTLNGKLLYSGLFDDIFVQPAAHDAGCALGAALMVSSELGRPAPRERLPDVYWGPDLGNEQATELELNAWSGHLDIQRSDDIASSAADWMANGAVIGWVQGRSEFGPRALGNRSILADPRPAENKDRINAVVKKRESYRPFAPSALEEDASEFFELPDGTRQLPFMNFVVRVREAKGNVLGAITHVDGTARLQTVSRKTNPAYWDVINAFKKRTSLPILLNTSFNNNAEPIVQSVSDAITTFLTTDLDGLVVGPFLVRKRPASLQDWSALAASLPPYASLHRVRSHIAPDRQETVCEIRMGHSAHSSMRISPELFEILMRIEGEASLGSLFDTALLDQAKREDLVKELRLVWELRGVRLHPLHAACRHDNVQSGT", - "output": "transferase activity ; biosynthetic process" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MSESEVRQTEVIPQWKREEVDELVDFIESYESVGVVGVAGIPSRQLQSMRRELHGSAAVRMSRNTLVNRALDEVNDGFEELKEYIAGQVALIGTNDNPFALFKELEASKTPAPINAGEVAPNDIVIPEGDTGVDPGPFVGELQQVGASARIMDGSIMVTEDSNVLSEGEEVSEELANVLAELGIEPKEVGLDLRGVFSEGVLFEPDELAIDVDEYRADIQSAVSAATNLSVNAVYPTAQTAPTLIAKATSEAKAVGLFANIESPDFMPELISKADAQLRALAANIDDEEALPEELRGVSAADTGAAEEEESTDEEAADADQADAAEDDDAADDDGDDEDAGDALGSLF", - "output": "ribonucleoprotein complex ; ribosome ; large ribosomal subunit rRNA binding ; translation" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MKKKLGLLAMVVALMAIATGCSETGQPITSKSTGIWNEYFVYPLSQLITYFADLFNSNYGLAIVITTLIIRFALLPLMIKQTKSTKAMQALQPEMVKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIFVQMPILFAFYHAIMRTAEIKQHSFLWFDLGHADPFYILPVVAAITTFIQQKLAMAGTAGQNPQMAMMLWLMPIMILIFAINFPAALSLYWVVGNIFGIAQMYFIKGPEIKASKAGKAGGSSK", - "output": "plasma membrane ; membrane insertase activity ; protein insertion into membrane ; protein transport" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MEMSFRWYGEDDPVTLENIGQIPTMKGIVTAIYDVPVGEVWSRERIQQLKEKVEAAGLKISVIESVPVHEDIKLGRPTRDLLIDNYIQTVKNLAAEGIDTICYNFMPVFDWTRTDLAYQYPDGSTALIFDETVSKKMDPVNGELSLPGWDASYSKEEMKAIMDAYAEIDEEKLWENLTYFIKRIIPEAEAVGVKMAIHPDDPPYSIFGLPRIITGLEAIERFVKLYDSKSNGITLCVGSYASDPQNDVLEISRRAFELDRVNFVHARNIKLGDGKSFKESAHPSEYGSIDMYEVIKLCHEFGFEGAIRPDHGRMIWGETGRPGYGLYDRALGATYVSGLYEAVIKGSK", - "output": "mannonate dehydratase activity ; glucuronate catabolic process" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MEEHQALVIDNGSGMCKAGFAGEDAPRAVFPSLIGRPLQRSIMVGMGNKDAYVGDEAMSKKGILALKYPIEHGIITNWDDMEKIWHHTFYNELRVGPEEHGVLLTEAPLNPKANREKMTQIMFETFRVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILMERGYSFNTSAEREIVRDIKEKLCYIAFDFEGEMKKASESTAVDTSYELPDGNIITIGNERFRCPEVLFQPNFIGMEAAGVHETAFNSIGKCDIDIRKDLYSNVVLSGGTTMFEGIAERMTKELTAMAPASMKIRVVAPPERKYSVWIGGSILSSLSTFQSMWITAEEYEDAGCGIVHRKCF", - "output": "cytoplasm ; cytoskeleton ; ATP binding ; hydrolase activity" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MKVSELNLKAKSLLEFHLDDIELSGEISKITIHGSGHWYFDLKDEKSSIACVMFKGFNQFVQTQPKVGDMLDLRGYVSLYEASGRYQFIAKSMQKTSLGDLEAKFLALKEKLEKEGLFDINAKKSIVKFPKKIGIITSFTSAALQDMLKLISQKEYNLCKITIFNALTQGQSAPNSLINALKKANEYDLDAIILARGGGSREDLFCFNDEELARCIFSLKTPVVSAIGHEIDYVISDFVADLRAPTPSAAIDMIFPNKLSLEQGLDELTMRFKSQMLNHLKFYQNKIDHLQNLAKAKSLENAFFLRKQKLDFLQSQLKSVLNLKLLNYENKLNNFEELLAQHKNFFDKSKNLINLQKDGKNISLEKLKKGDIIKLCSINESKEAQIL", - "output": "cytoplasm ; exodeoxyribonuclease VII complex ; exodeoxyribonuclease VII activity ; nucleic acid binding ; DNA catabolic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MEVILLEQVVNLGKLGDKVAVKSGYARNYLIPQGRAVSATKENEAHFESRKAELEKAAGDKVAVAERCKQALADLGSVTIPAKAGTEGKLFGSVGAADIAEALTKAGVEIGKKEVRLPEGALRQVGEYELVIHLHPTVEAPIKVVVTGEEE", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MKSLSILGSTGSIGLSTLDVVRQHPEKFNVTGLAEGHDINLLAEQIKEFRPDIVSVRDKASAGLLREQLGSEKPEILWGIEGAAAVGAAEGSEMVVSAIVGAAGLVPTVSAIKAGKDIALANKETLVVAGQLVSDLVKEHKVTLLPVDSEHSAIFQSLSGHRKEDIERIILTASGGPFRHTSAEDLRHVGPEKALKHPQWTMGAKITIDSATLMNKGLEVIEAHWLFDMPADKIGVVVHPQSIIHSMVEYIDGCVMAQLGAPDMRAPIAYALAWPERCESGIKKLDLTQIGTLTFEQPDMERFPALRLAFDALKAGQTFPAVLNAANEIAVAAFLDKKIGFTDIPAIADRTMQAHDPYTPSGLDEYLAADRWARDTAKTMTN", - "output": "1-deoxy-D-xylulose-5-phosphate reductoisomerase activity ; metal ion binding ; NADPH binding ; isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway ; terpenoid biosynthetic process" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MRQYHNLMKEVLAKGVQKSDRTGTGTISVFGHQMRFNLADGFPMVTTKKLHMKSIVYELLWFLKGSTDNNWLKERGVSIWNEWAAPDGDLGPIYGYQWRSWPAPNGQHIDQISEVVETIKKNPDSRRIIVSAWNVADIPRMALAPCHAFFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTHMVAQQCNLEVGDFIWTGGDCHLYSNHLEQVDLQLSRDFLPLPKLNILRKPDSLFDYEFEDFEIVGYESHPHIKAPVAI", - "output": "cytoplasm ; thymidylate synthase activity ; dTMP biosynthetic process ; dTTP biosynthetic process ; methylation" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MNYFPIFANLAGRPVLVVGGGSVAARKISLLLDAGAQVRVVANQLNAELSALAAENKILWLAEEFRAEHIRTVFLIIAASSDQALNRRVFQLAESCQKPVNVVDDRDYCSFIFPSIINRNPIQIAVSSSGSAPVLARLLREKLEALLPHSLGDMAEISGRWRDAVKAKLKSVTERRRFWEKQFNGRFAALVKNQQTAQAEQELAKQLEQNYQGGFVSLVGAGPGDAGLLTLKGLQEIQQADVVLYDALVSDGILSLVRRDAERIFVGKRARGDRTPQEDTNALMVRLAREGRRVVRLKGGDPFVFGRGGEELETLARHQIPFSVVPGITAAVGATAYAGIPLTHRDYAQSAVFVTGHRKADAPDIEWQTLARSRQTLVIYMGALKAALIAERLQQHGRSPDTPAAVISQGTLPAQKTATGTLANLAELAETAPNPALIVIGEVVGLHEKLAWFGENGEGENRVGQAYPALGGLNAGQRAA", - "output": "NAD binding ; precorrin-2 dehydrogenase activity ; sirohydrochlorin ferrochelatase activity ; uroporphyrin-III C-methyltransferase activity ; cobalamin biosynthetic process ; methylation ; siroheme biosynthetic process" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MMTESEFIRASEALFEHIEDQIDENGWDFDCRFAGNVLTIEAGDGAQIIVNRHTPNQELWIAAKSGGYHFAEQNGKWLATRDGRDFYDVLNEALSAASGEAVEIAEL", - "output": "cytoplasm ; ferric iron binding ; iron-sulfur cluster assembly" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MQVEHEVATEGGQAPASSGHRKGIAGLAVAAIGVVYGDIGTSPLYTLKEVFNGPHAVPVNEANVYGILSLVFWALVTVVSAKYVVFITRADNRGEGGIMALTSLALRVVQPGRRAWWLSVLGVFGAALFYGDGMITPAISVLSAVEGLEVATPAFKPFVIPIALVVLVGLFVMQRRGTGSVGAIFGPVMVCWFLVLAVLGINGITLHPEIIGALDPRWAARFFIDQPLIGWLALGAVVLAITGGEALYADMGHFGRRPIKLAWFSLVFPALYLNYLGQGALILDHPDNVRNPFYMLVPDALVYPMVGMATLATIIASQAVISGAFSLTRQAIQLGYAPRMQTLHTSEHEIGQIYVPGVNWMLLGAVVALVVGFQSSSALASAYGIAVTLTMMIDTVLAFVVVRSLWKWGRAKAVLFLVVFLAVDIAFFSATTVKIFAGGWFPLLIGAAIFTLLRTWKRGRSLLNERIRSDTMPLDIFIQSMFQSPPPRVEGTAVFMTTWLDGVPRALLHNLIHNKVLHERVVLLRVDTADVPHVPEGERVEVEEIDYGFYRVRVHYGFKDDPDIPAALGLCAQRGLPFDMMETSFFLGRETLVSRVGSGMPQWREKLFILLFRNAGSAADYFCIPPNRVVELGTQVEL", - "output": "plasma membrane ; potassium ion transmembrane transporter activity ; symporter activity" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MPGLLVAGTTSDAGKSTLTAGLCRAFARRGVRVAPFKAQNMSNNSMVCQGPGGAGVEIGRAQWVQALAANATPEAAMNPVLLKPGSDHRSHVVLMGRSWGELASSNWFEGRQVLAETAHRAFDDLAARYDVVVAEGAGSPAEINLRAGDYVNMGLACHAELPTIVVGDIDRGGVFAAFFGTIALLSAEDQALVAGFVVNKFRGDLDLLAPGLRDLEGVTGRQVFGTLPWHADLWLDSEDALDLTGRRAASTGAHRVAVVRLPRISNFTDVDALGLEPDLDVVFASDPRGLGDADLIVVPGTRATIADLAWLRARGLDRALMAHVAAGKPLLGICGGFQMLGRVIRDPDGVEGPVAEADGLGLLDVETTFGAEKVLRLPRGQGLGVTASGYEIHHGRITAGDAAQQFLGGARDGQVFGTMWHGSLEGDALREAFLRETLGLTGSGTSFSAARERRLDLLGDLVERHLDVDALLALARHGCAPALPFLPPGAP", - "output": "ABC-type vitamin B12 transporter activity ; catalytic activity ; cobalamin biosynthetic process ; glutamine metabolic process" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MRSALLLACLLATASAFSVRSWLRRARAGDSEENAVLKSRHRYYLYRYAYPPLHRYKGSDSSEEEGDGSEEEEEGGAPSHAGTQAAGEGLTLGDVGPGGDAASAHQDCKGGQKGTRGDSGDEDSDEEEEEEEEEEEEEEVEEQDVSVNGTSTNTTAETPHGNNTVAAEEEEDDDEEEEEEEEEEEEAEATTAAATTAQDEVTTLGDEQRSEVTTAGEQWEYEVTVGARGDEGPTESSYGDQEEPARGDSYRAYEDEYGYYKGHGYDMYGQDYYYNQ", - "output": "extracellular region ; bone mineralization ; cell adhesion ; extracellular matrix organization" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MSHRVLVIGSGGREHAICWKLSQSPKVAQIYALPGSHGIQLVEKCRNLDAKTLDPKDFEAIAKWSKENQIALVVVGPEDPLALGLGDVLQSAGIPCFGPGKQGAQIEADKKWAKDFMLRHGIPTARYESFTDTEKAKAFIRSAPYPALVVKAAGLAAGKGVVVAANAKEACQAVDEILGDLKYGQAGATLVVEELLEGEEVSVLAFTDGKSVRAMLPAQDHKRLGNGDTGPNTGGMGAYCPCPLISQPALELVQKAVLERAVQGLIKERINYQGVLYAGLMLTRDGPRVLEFNCRFGDPETQVILPLLESDLFDVMEACCSGKLDKIPLQWRNGVSAVGVILASAGYPETSTKGCIISGLPAANTPTQLVFHSGLAVNAQKEALTNGGRVLIAIALDGSLKEAAAKATKLAGSISFSGSGAQYRTDIAQKAFKIASASTPGLSYKDSGVDIDAGDALVQRIKPLSRGTQRPGVIGGLGGFGGLFRLKELTYKEPVIAEATQGVGAKIHLALTHEFYENVGYDLFALAANDVLEVGAEPVAFLDYIACGKLQVPLAAQLVKGMADGCRDARCALVGGETAEMPSLYAPGQHDMAGYCVGIVEHSRILPRFDLYQPGDLLIGLPSSGLHCAGFNEILTQLAASKVNLRERSPVDGGDDGLTLAHVLATPTQLYVQQLLPHLQKGDEIKSVAHVTHGLLNDILRLLPDGFETTLDFGAVPVPKIFGWLAGKLKLSAQTILERHNCGIGMVLILPQSSQLWRTSLPGAKVLGVLQRRSKVSGSPVQVRNFVEQLEKVASPFGGLGDRELPEELKKLPSNSDLSAPREECFENAAGRRLTRIPTHYKDPILILGTDGVGTKLKIAQQTNRNTSVGIDLVAMCVNDILCNGAEPISFSSYYACGHWQEQLAKGVHSGVQEGARQANSSFIDSHSAALPLLYEPQVYDLAGFALGIAEHTGILPLLAEIQPGDVLIGLPSSGVHSNGFSLVHAVLKRVGLGLHDKAPFSDKTLGEELLVPTKIYVKALSTLLSRGKHGIKALAHITGGGLSENIPRVLRKDLAVRLDANKFQLPPVFAWLAAAGNISSTELQRTYNCGLGMVLVVAPTEVEDVLKELRYPQRAAVVGEVVARKDPKKSQVVVQNFEASLARTQKMLSQRRKRVAVLISGTGSNLQALIDATRDSAQGIHADVVLVISNKPGVLGLQRATQAGIPSLVISHKDFASREVYDAELTRNLKAARVDLICLAGFMRVLSAPFVREWRGRLVNIHPSLLPKYPGLHVQKQALEAGEKESGCTVHFVDEGVDTGAIIVQAAVPILPDDDEDSLTQRIHKAEHWAFPRALAMLVNGTALISPEVSSQ", - "output": "cytosol ; ATP binding ; metal ion binding ; phosphoribosylamine-glycine ligase activity ; phosphoribosylformylglycinamidine cyclo-ligase activity ; phosphoribosylglycinamide formyltransferase activity ; 'de novo' IMP biosynthetic process ; adenine biosynthetic process ; purine nucleobase biosynthetic process ; purine nucleotide biosynthetic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MRTFNFLSFPQVHRQALVKAVLVAIATVSLLLTSDVINPQSAQAYPFWAQQTAPETPREATGRIVCANCHLAQKPAEIEIPHSVLPDSVFEAVVKIPYDPASQQVLGDGSKGGLNVGAVLMLPDGFKIAPPDRIPEEMQEKLGGVYFQSYKEGQDNVVIVGPLPGDQYKEIVFPVLAPDPSQNKGIHFGKYAVHLGANRGRGQVYPTGEPSNNNAFKASTAGTISQISKTEAGGYEVTITSEAGPVVENIPAGPELIVSEGQAIEVGQFLTSNPNVGGFGQKDTEVVLQNPGRIKGLVLFLGGIMLCQILLVIKKKQVETVQAAEMNF", - "output": "plasma membrane-derived thylakoid membrane ; electron transfer activity ; heme binding ; iron ion binding ; photosynthesis" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MASSSSLTRSGSVHLDEKWKLSKKDGGASRITRSSSTSSSSFNGKKQGRCAFTRKCARLVKEQRARFYIMRRCVIMLICWRDNYSDS", - "output": "plasma membrane ; negative regulation of cell population proliferation ; shoot system development" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MKSSPAELISEAKSSTQNSKMKRAVSVLDFILRLIAVVATLASAIAMGTTDESLPFFTQFIRFRAEYDDLPTLRLFVVASAFASGYLILSLPLSILHITRSSARRTRVILIILDMVMLTSLTAASSAAAAIVYLAHKGNAKANWFAFCQQYDSFCERISGSLIGSFIAIPLFIMLILFSALVLSKR", - "output": "plasma membrane ; cell wall organization" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MAILGLGTDIVEIARIESVIARSGERLARRVLSDNEWAIWKTHHQPVRFLAKRFAVKEAAAKAFGTGIRNGLAFNQFEVFNDELGKPRLRLWGEALKLAEKLGVVNMHVTLADERHYACATVIIES", - "output": "cytoplasm ; holo- synthase activity ; magnesium ion binding ; fatty acid biosynthetic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MYKPKIICLLLGMLSGLVFAPTFFIPALLTLSYLCYIVQKSENWQEAAKFGYLFGFGHFLSGIYWISIGVSVYIADFWWAIPFALFGLPIVLAFFISASCTLSFFAKNNKYYQFIFCICWVLFEWVRSWIFTGLPWNLIGYAFSFSDILIQTLSIIGIYGLSFIVIYISTSAYPLFRKQFTQLKILLASSVLILSVIVIYGAVRLSNNPTNFTDIKVRLVQPSIPQTEKWNEEEFWHNLMLHINLSENSEPTDLIIWSEAALIVPDDIPQVKSELLQMLNSTNAILITGGISDNKKQGDEFELYSAMYALDKNDHKLFEYHKSHLVPFGEYMPLKKILPFKKLTHGLIDYKEGDGGLVYLEKYNLKIKPLICYESIFPDFVRTNNEIVDVIINITNDAWYGKSSGPYQHFHISRSRAVENGLPMIRVANNGISAIVDPFGRTIEKLNLNEINYTQGLIPKKLNSPTIFSQFGNFTILLLIVFILLINYLLALILDN", - "output": "plasma membrane ; N-acyltransferase activity ; lipoprotein biosynthetic process" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MTARRLINIVPNTSKLDPLKEEDSTHLKQNQPKKFSTKELMLSEYTERKSCSLPLSKSRSGSSASSSTTGSNGKNIGTRRPSSNLDFNFASQDVVKNVLGNNNPHVPTAKCIRPISDDSIGTSSTEIFSSSHSNTTSDSLCTSDISSEEGEIANSKMEDNCFFKSMREADHRSNITPLKKSRPGSILQKTRTASSADKTICSMSTITTCIPSRQNSVSTPKLSRTVGLPGSSNTTNSIAASQTSFISENDSPLKHHCMSTATIQEPKLMPITKTPYVHSNSTSVILPYKTTQLTPSQRYRLRKEQNDQSLRKAIKMKEKFYEDQDVNLELQEGDVDGSLIWNIPMASLSTSSFLTLSKFNRKEMSLDSARGDEEILIQENNCEGKQHSSSALCVDKTFHQVHSTRKHTSNSSNTLKESCLDYKELPPTCIPGISPVSDSQYIQDTMKNLSQIYLHSSEKISKSILSGRSRSVQSLPLEFKEASSQGMEDLMLVSEDKLKAVSHFRPSWLPPKDFKERKLQDKQIYKNIDLASMEELQKNKERDEKAKKNEQNKVKFQHLLDRGITRNSSLSELKKIIWETPLISKVRLQIYSQLLQSDNCLITKCFIESFEEVMQLLNKMDFPKDKEFEIRQLIEHDVQEKVFYKNGTDKQVVSDLMLLLQLKSISQQGLVTGDEMLFYHFLTDQSFGTLKETWEMVNLIQMTCFSEICKEKYDSRILNPRGIVAHLLRKDEFKNEFNGGCLNSNTWWNILQRMDHKLFMWVMDVIIVHNGQNFANYPVKMEIFKDKVWEYYRSKKVIVNYKILVSLTVNVLLNYHFGYDNLKHLSDLDDKHFCIPLYTEDSIEEENLNNIFTKWWLHYYRKLR", - "output": "Golgi apparatus ; fungal-type cell wall organization ; protein transport" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MTSRTAPASPVVHVIGAGLAGSEAAWQIARAGVRVVLHEMRPVRTTEAHKTDGLAELVCSNSFRSDDAANNAVGLLHAEMRRLGSLIMQAADANQVPAGGALAVDRDGFSAAVTKALAEHPLIEICREEIDGLPPQEWTNVVIATGPLTSAPLADAIRGLTDESALAFFDAIAPIVHRDSIDMSVAWFQSRYDKVGPGGTGADYLNCPMTREQYDAFVDALIEGEKVDFKDWEKDTPYFDGCLPIEVMAERGRETLRHGPMKPVGLTNPHNPTVKPYAIVQLRQDNKLGTLYNMVGFQTKLKHGAQLRVFRTIPGLENAEFARLGGLHRNTFLNSPKLLDESLRLRASPRLRFAGQMTGCEGYVESASIGLFAGLAAAADLVGQSLAPPPPTTALGALLGHITGGHIETIDAGPRSFQPMNINFGLFPPLANPPTKGPDGKRLRGPEKSVAKKQALSARALADIDAWIAAHLKLPKAA", - "output": "cytoplasm ; 5,10-methylenetetrahydrofolate-dependent tRNA (m5U54) methyltransferase activity ; flavin adenine dinucleotide binding ; methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase (FADH2-oxidizing) activity" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MVIGLSHYLTVSAILFTLGVFGIFLNRKNVIVILMSVELILLSVNINMVAFSHFLNDIVGQVFALFILTVAAAEAAIGLAILVVFYRNRGSIAVEDVNMMKG", - "output": "plasma membrane ; NADH dehydrogenase (quinone) activity ; quinone binding ; ATP synthesis coupled electron transport" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MLMSRIAYCRLDGILLLDKPAGISSNSALQIARRLLRAKKGGHTGSLDPLATGLLPLCFGEATKIAGLLLGSTKAYDADVLLGTTTTTDDAEGAVLLTRPVPTLDAEMVDAVIPQLIGRIRQRAPIYSALKQGGEPLYAKARRGEVVNAPVREVEVHAIELLVLATPRLQLRVTCGSGTYIRSLVRDLGEILGCGAHITALRRRWVAPFQIPKMLTLDALEQALSAGRDPDSLLLPLVEGLAGFPALELDAQRLACFRLGQRLRDHSFQTGRVAVFSRDGIPAGLGEVDSEGLLVPQRLFNL", - "output": "RNA binding ; tRNA pseudouridine synthase activity ; tRNA pseudouridine synthesis" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MVDKKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALNGAYATFIVTNYWESCSQEQEVKQGKLLADLARRLGLHYVVYSGLENIKKLTAGRLAAAHFDGKGEVEEYFRDIGVPMTSVRLPCYFENLLSHFLPQKAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPEKYVGQNIGLSTCRHTAEEYAALLTKHTRKVVHDAKMTPEDYEKLGFPGARDLANMFRFYALRPDRDIELTLRLNPKALTLDQWLEQHKGDFNLL", - "output": "cytosol ; nucleoplasm ; nucleus ; perinuclear region of cytoplasm ; identical protein binding" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MTEAEQKAAFLGGLVVSFKEQMHTDVLVKPGEEAPPIPTHKAVLAARSKVFRNMLDSDECKTSPEESITLPDLSHDELKSLLEFLYSGNLKAPYNQYRSLYLAADKYDISYLQDVCRNHFIASLSSRNVLDILELASIPCDTILKDAAINHIVKHMEEVVVPMKYETFVQRNPDLSVEITRAYLRETKAKAKDHGAPLNGNTRPRIW", - "output": "protein ubiquitination" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MNYTILVTGPPYGTQNSSTAFLFCQSLLKTKHILHSVFFYCDGVLNANNMTTPAIDEFNLINAWQGLNKKHQVKLYVCNSAALRRGVIEDEKLFNMNVKKGNLALSFQLSGLIELAKSIKICDRIIQF", - "output": "cytoplasm ; sulfurtransferase activity ; tRNA processing" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MAKKKSPGTLAENRKARHDYNIEDTIEAGIVLQGTEIKSIRRGSANLKDSYAQVKNGEMYLNNMHIAPYEEGNRFNHDPLRSRKLLLHKREIFKLGEQTREIGYSIVPLKLYLKHGHCKVLLGVARGKKKYDKRQALKEKAVKRDVARDMKARY", - "output": "cytoplasm ; RNA binding ; trans-translation" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MHQKRTAMFQDPQERPRKLPQLCTELQTTIHDIILECVYCKQQLLRREVYDFAFRDLCIVYRDGNPYAVCDKCLKFYSKISEYRHYCYSLYGTTLEQQYNKPLCDLLIRCINCQKPLCPEEKQRHLDKKQRFHNIRGRWTGRCMSCCRSSRTRRETQL", - "output": "host cell cytoplasm ; host cell nucleus ; DNA binding ; identical protein binding ; metal ion binding ; PDZ domain binding ; activation of GTPase activity ; DNA-templated transcription ; modulation by symbiont of host protein ubiquitination ; modulation by virus of host apoptotic process ; positive regulation of transcription by RNA polymerase II ; regulation of proteolysis ; suppression by virus of host transcription ; suppression by virus of host type I interferon-mediated signaling pathway ; suppression by virus of host viral-induced cytoplasmic pattern recognition receptor signaling pathway via inhibition of IRF3 activity" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MELKCLNWFENRGNDSRFLFLKARRADNAVVYLRFVQHFYYVVRADAVADIAQPLAWTRALGPMSVVSIDEIVARSAKIPERQRSEIELCLVASERKLAPPEVFMSDFLNVSWFFVAHDIDPDGCYRVDPALLRDLGSNCFHCDDPGACFAEKIPRFNVTRSGLFLDIECHFEKKFPSVFKNAVSHISFCVVDKDGAERRFTLTNSDMLSDADLEEAARREIPVCLDPADVKFDAEVTLCPEVTLLRVAKRLLEMPLDFVVTFNGHNFDLRYLDSRLSLLTGEHIRFRLPDGTETVNFCVYERTKSSHKGVGGVSSTTFHINNNNGTIYFDLYAFIQRTEKLDSYKLDAISKNAFHCTAVVEDARPDAVRFRGDRSTDADGNAAVFARVLSTGNYVTVDERVCRVLHKRVDEDGFTVDLADPAARAPGDRVTLAFGKDDVSLADMYANYSLDVCLDMARYCLHDACLCLYLWSHYGVETKIAAAASTYLLPQSVVFEYRASTCIKGPLMKLLLENRTVMVRADTKSKFFYEGGRVMAPKQKMHNKHVLIFDYNSLYPNVCIYANLSPETLVGVVVSDNRLDAEVAAVDVRRMFPAPRYIAVPCEPRSPELVAEVAIFDREAKGIIPMLLRSFLDARAKYKKLMKAAETAVDREIYNSMQYTYKITANSVYGLMGFRNSALFSYASAKSCTAIGRTMIAYLERTLDGASVCGTRLSLAAAPDNPLLRDEAFAGRAAELEIDAAVAGERTERVGFRSVYGDTDSVFLEVGASDIAFSRRVGRCLERVINEHVLFANFKVEFEAVYCNLIMQSKKKYTTIKFAVSDGGGSERVSKGTSETRRDVAPFHKLMIRKYKDMLCRALAEEGSGNVGVEILRSLEDELTFEFEARSMPLDWFLLSRTHHKNFKSPDNPNVALVTRYNAANAEAIEIGERYFFAYVCEEGPWRRRIANVKSYERVVDKTFRLDKNERIMYEVYFKRLCTEIVNLLDNKAMCTLFFERLFGSKPVFTG", - "output": "DNA binding ; DNA-directed DNA polymerase activity ; nucleotide binding ; DNA replication ; viral DNA genome replication" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MAKESYKRDKPHVNIGTIGHVDHGKTTLTAAITSVLAKSGKAAAREFGDIDKAPEERERGITISTAHVEYQTDKRHYAHIDCPGHADYIKNMITGAAQMDGAILVVAGTDGPMPQTREHILLARQVNVPALVVFLNKVDIADPELLELVEMELRELLTEYGFPGDDIPIIKGSALNALNGDPEGEKAIMELMDAVDDYIPEPVRDVDKPFLMPVEDVFSISGRGTVGTGRIERGIIKVGNEVEIVGIKPTTKSVVTGIEMFQKTLDEGQAGDNAGLLLRGVDKEALERGMVIAKPGSITPHTKFKAEVYILKKEEGGRHTPFFNGYRPQFYFRTTDVTGSVTLPEGVEMVMPGDNLSVDVELIAPIAMEESLRFAIREGGRTVGAGSVTKIVE", - "output": "cytoplasm ; GTP binding ; GTPase activity ; translation elongation factor activity" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MEIDLGANAFGIDFHPSTNLVAAGLIDGHLHLYRYDSDSSLVRERKVRAHKESCRAVRFIDDGQRIVTASADCSILATDVETGAQVAHLENAHEDAVNTLINVTETTIASGDDKGCVKIWDTRQRSCSHEFNAHEDYISGMTFASDSMKLVVTSGDGTLSVCNLRTSKVQSQSEFSEDELLSVVIMKNGRKVICGTQNGTLLLYSWGFFKDCSDRFVDLAPNSVDALLKLDEDRLITGCDNGIISLVGILPNRIIQPIGSHDYPIEDLALSHDKKFLGSTAHDSMLKLWNLEEILEGSNVNSGNASGAAEDSDSDNDGMDLDNDPSKSSKGSKRKTKSKANTLNATNNFFADL", - "output": "cytoplasm ; nucleus ; determination of bilateral symmetry ; developmental vegetative growth ; embryo development ending in seed dormancy ; embryo sac development ; endosperm development ; polar nucleus fusion" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MAVNTQPIIRLTNVTKSYGEHQVLKNINLDLEAGKFYTLLGPSGCGKTTILRTIAGFTDATSGQVYFDGQVINTLPANQRQVNTVFQDYALFPHMNVAENVAFGLKLHKVPKDEIETRVQKALAMVQLADLGEREISEISGGQQQRVAIARALVMQPKVLLLDEPLSALDAKLRKDMQYELRDLQQRLGITFLFVTHDQEEALAMSDEIFVMNAGEILQGGSPVDIYDEPINHFVANFIGESNIIPGKMLKDFEVEFVGKQFECADAGMQPNEAVEVVLRPEDLDIVAANQGKLVVTVDSQLFRGNYFEIVAYDTDHNEWLVHSTNPAAEGEPIGLTFDPQDIHVMRLNESEAAFDARLEQYEDD", - "output": "ATP-binding cassette (ABC) transporter complex ; ABC-type putrescine transporter activity ; ATP binding ; ATP hydrolysis activity" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MQINPTTSGTAVSQLEEKNLGRVAQIIGPVLDVVFPPGKMPNIYNALVVKGQDADGQEIKVTCEVQQLLGNNRVRAVAMSATDGLTRGMDVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTRTTSPIHRSAPAFIQLDTKLAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNITESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGEDHYETAQRVKETLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLEETIRGFKLILSGELDSLPEQAFYLVGNIDEATAKAINLEVESKLKK", - "output": "chloroplast thylakoid membrane ; proton-transporting ATP synthase complex, catalytic core F(1) ; ATP binding ; proton-transporting ATP synthase activity, rotational mechanism ; proton-transporting ATPase activity, rotational mechanism" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MSFSDQNLIWIDLEMTGLDPEMHKIIEMATIVTDSELNILAEGPVIAIHQPESELAKMDEWCTTTHTASGLVARVRQSQVSEEEAIDQTLAFLKQWVPEGKSPICGNSIGQDRRFLYKHMPRLEAYFHYRYIDVSTIKELTRRWQPEVLKEFSKTGSHLALDDIRESIAELQFYRKAVFKI", - "output": "cytoplasm ; 3'-5'-RNA exonuclease activity ; nucleic acid binding" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MTKEKELHCSFCGKEQKEVDKLIAGTSGYICNECIELCHDMLANADDIEEIDEEFQEEEPKLPTPHEIRAHLDDYVIGQDYAKKVLAVAVYNHYKRLRSEKNTSEVELGKSNILLIGPTGSGKTLLAQTLARMLNVPFAMADATTLTEAGYVGEDVENVLQKLLQNCDYDIEKAQQGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKLVEGTVASIPPQGGRKHPQQEMLRVDTSKILFICGGAFAGLDKIIEKRTNTGGKGIGFGADVRIDEEKVSLTELFKQVEPDDLMKFGLIPEFIGRLPVIAPLSELDEEALVKILTEPKNALTKQYQVLFSLENIELEFTQEALIAMAKKALARKTGARGLRSIVETLLLDTMYDLPSIENLQKVIVEEETVTENKAPVLKFNS", - "output": "ATP binding ; ATP hydrolysis activity ; ATP-dependent protein folding chaperone ; protein dimerization activity ; unfolded protein binding ; zinc ion binding" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MSEIIESTVAFLIGLLKASWTRTAWHFAVLSFVYVIARSIYRVWFHPLSSYPGPKLAALTQLWYARHWMGGRYPFAIEEAHRRYGEVVRIAPNELSFNTAQSFNEIYGHTTKDHKPFIKGTFYEHYQPEPGIVAERNPEKHRETRKLLAHGFSARALKAQESIIAQYSDLFLAQVKKLAKSHFWIDTIHDAGILVTLFEIGRRLPLLWPLILFSLPNGIKKKFDLFLKYSRDLVRTRVARQNTLTREDFFARLLADKSHSQSEEWLLAQANVLVIAGSDTTATALTTLIYYLAAHQDKLWHLQQELRETFDEASDMTSEKLQGMLYLNAVIEEGLRICPPTAFGLPRISPGAMVDGRLIPKGTVVSTSSWTTAHREDYFHDARGFHPERWLPAGHALWNAKFQHDHLSASKPFSLGPRGCLGVNLAYMEMRITLAKLAWKFDWELVNADQLDWESELRFEGFWKLPVPRVRFYCIHV", - "output": "membrane ; heme binding ; iron ion binding ; monooxygenase activity ; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen ; mycotoxin biosynthetic process ; organic cyclic compound biosynthetic process" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MIDDTLLESEERMTQSVEYAREDLTTIRTGRANPSMFNGVQAEYYGVMTPITQMATISVPEPRMLLIKPYEPSIMNAIENAIRNSDLGVNPTNDGQVLRVTVPQLTEERRKEMVRLAKSKGEDARIAIRNIRRKGMDELKRIQKDGEAGEDEVQAAEKELDKTTHEYVSQVDKLIEAKEKELMEV", - "output": "cytoplasm ; translational termination" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MNPAHLLVLPAVCVSFLGASIIPPQSLNLIQFKDMIRCTIPCERTWGEYADYGCYCGKGGSGRPVDALDRCCYVHDNCYGEAQKRNCNPYMKSYSFKCAKRTLFCYDAPGSCARFVCDCDRTAALCFGDSEYIGRHKNIDTKRHCQ", - "output": "extracellular region ; calcium ion binding ; phospholipase A2 activity ; toxin activity ; arachidonic acid secretion ; lipid catabolic process ; phospholipid metabolic process" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MTTALDQLKQYTTVVADTGDFQQLAQYKPQDATTNPSLVLKAVQKDEYKPLLEKTVRDHASKPVGSIIDNLLIAFGTEILKIVPGRVSTEVDARLSFDTKASIDKAHELIKMYDAQGIGRERVLIKLASTWEGIRAAEVLQKDGIKCNMTLLFSLAQAVAAAEAGAQLISPFVGRIYDWYKKNAGSNWDEARDGGANDPGVQSVRRIYAYYKKFGYPTEVMGASFRTTSQILELAGCDLLTISPDLLQKLHDSNDRIERKLSPEASRNADIERVPTDEASFRFLVNDDAMATEKLSEGIRVFAADAIKLEKVIEALR", - "output": "cytoplasm ; transaldolase activity ; carbohydrate metabolic process ; pentose-phosphate shunt" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVASKPFAERYFPNGVTRSSLLKAPAVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPHLQIEKELESGELINLTPGLLQRRMLYWHRFAPESRMMRKVTDALLEYGHKVLRQD", - "output": "DNA binding ; DNA-binding transcription factor activity" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MALCNGDSKLENAGGDLKDGHHHYEGAVVILDAGAQYGKVIDRRVRELFVQSEIFPLETPAFAIKEQGFRAIIISGGPNSVYAEDAPWFDPAIFTIGKPVLGICYGMQMMNKVFGGTVHKKSVREDGVFNISVDNTCSLFRGLQKEEVVLLTHGDSVDKVADGFKVVARSGNIVAGIANESKKLYGAQFHPEVGLTENGKVILKNFLYDIAGCSGTFTVQNRELECIREIKERVGTSKVLVLLSGGVDSTVCTALLNRALNQEQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVINAAHSFYNGTTTLPISDEDRTPRKRISKTLNMTTSPEEKRKIIGDTFVKIANEVIGEMNLKPEEVFLAQGTLRPDLIESASLVASGKAELIKTHHNDTELIRKLREEGKVIEPLKDFHKDEVRILGRELGLPEELVSRHPFPGPGLAIRVICAEEPYICKDFPETNNILKIVADFSASVKKPHTLLQRVKACTTEEDQEKLMQITSLHSLNAFLLPIKTVGVQGDCRSYSYVCGISSKDEPDWESLIFLARLIPRMCHNVNRVVYIFGPPVKEPPTDVTPTFLTTGVLSTLRQADFEAHNILRESGYAGKISQMPVILTPLHFDRDPLQKQPSCQRSVVIRTFITSDFMTGIPATPGNEIPVEVVLKMVTEIKKIPGISRIMYDLTSKPPGTTEWE", - "output": "cytosol ; ATP binding ; GMP synthase (glutamine-hydrolyzing) activity ; GMP synthase activity ; glutamine metabolic process ; GMP biosynthetic process ; purine nucleobase biosynthetic process ; purine ribonucleoside monophosphate biosynthetic process" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MGPSGTAHRMRAPLSWLLLLLLSLQVAVPAGALAETLLDAPGARGASSNPPSPASVVAPGTTPFEESRLPVFTLDYPHVQIPFEITLWILLASLAKIGFHLYHKLPTIVPESCLLIMVGLLLGGIIFGVDEKSPPAMKTDVFFLYLLPPIVLDAGYFMPTRPFFENLGTIFWYAVVGTLWNSIGIGLSLFGICQIEAFGLSDITLLQNLLFGSLISAVDPVAVLAVFENIHVNEQLYILVFGESLLNDAVTVVLYNLFKSFCQMKTIQTVDVFAGIANFFVVGIGGVLIGILLGFIAAFTTRFTHNIRVIEPLFVFLYSYLSYITAEMFHLSGIMAITACAMTMNKYVEENVSQKSYTTIKYFMKMLSSVSETLIFIFMGVSTVGKNHEWNWAFVCFTLAFCLIWRALGVFVLTQVINWFRTIPLTFKDQFIIAYGGLRGAICFALVFLLPATVFPRKKLFITAAIVVIFFTVFILGITIRPLVEFLDVKRSNKKQQAVSEEIHCRFFDHVKTGIEDVCGHWGHNFWRDKFKKFDDKYLRKLLIRENQPKSSIVSLYKKLEIKHAIEMAETGMISTVPSFASLNDCREEKIRKLTPGEMDEIREILSRNLYQIRQRTLSYNRHNLTADTSERQAKEILIRRRHSLRESLRKDNSLNRERRASTSTSRYLSLPKNTKLPEKLQKKNKVSNADGNSSDSDMDGTTVLNLQPRARRFLPDQFSKKASPAYKMEWKNEVDVGSARAPPSVTPAPRSKEGGTQTPGVLRQPLLSKDQRFGRGREDSLTEDVPPKPPPRLVRRASEPGNRKGRLGNEKP", - "output": "apical plasma membrane ; plasma membrane ; potassium:proton antiporter activity ; sodium:proton antiporter activity ; epithelial cell differentiation ; potassium ion transmembrane transport ; protein localization ; proton transmembrane transport ; regulation of intracellular pH ; regulation of pH ; sodium ion import across plasma membrane ; sodium ion transmembrane transport ; sodium ion transport" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MTIVLGRVPKEENDLFDTMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFALIGFMLRQFELARSVQLRPYNAISFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSAIGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL", - "output": "chloroplast thylakoid membrane ; photosystem II ; chlorophyll binding ; electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity ; iron ion binding ; oxygen evolving activity ; photosynthetic electron transport in photosystem II" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MSINATARALLLTEFVSAFFLTMRYFFQPKATINYPFEKNPISPRFRGEHALRRYPNGEERCIACKLCEAICPAQAITIEAGPRRNDGTRRTVRYDIDMVKCIYCGLCQEACPVDAIVEGPNFEFATETREELYYDKAKLLANGDRWEREIAKAIELDAPYR", - "output": "plasma membrane ; 4 iron, 4 sulfur cluster binding ; iron ion binding ; NADH dehydrogenase (quinone) activity ; quinone binding" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MADVPSMDALVALLRRLPGIGPRSAQRISYELLVRKRDLMPQLAAAFQQAHAVVRFCERCNNLSEAPLCAVCRSEHRDRSILCVVESPADLRAIEDTGVFVGEFFVLMGHLSPLDGIGPEALHIDRLSARLGETDLQEVIFATNPTLEGEATAQFLAGLVPDGVTISRIARGVPVGGELEYVDRSTLGRALHGRRLLDE", - "output": "DNA binding ; metal ion binding ; DNA recombination ; DNA repair" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MKICLLCVGRLSIGYLREGAADFEARLQRYLPVRIVELKEEKSGKNDAEYIRRQEGRRILEKIPAGSFVIALDERGRSVSSEKLAALLERHMMESTPELTLIIGGAYGLCDEVKQRADMLMSLSEMTLTHQMARLVLLEQLYRGFTIVRNEPYHNR", - "output": "cytoplasm ; rRNA (pseudouridine-N3-)-methyltransferase activity" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MSKENEVLLNEDIRAREVRCVGDDGTAYGVISRDEALEISNKLGLDLVLIAPDAKPPVCKIMDYGKFRYQQEKKQKEAKKKQKTIEIKEIKLSVKIAQNDINYKVKHASEFLQDGKHVKFRVFLKGREMSTPEAGVAMLEKVWEMIKDEADRDKEPIIEGRYVNMLVTPKKG", - "output": "cytoplasm ; translation initiation factor activity" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MDQREILQQLLKEAQKKKLNSEEFASEFLKLKRQSTKYKADKIYPTTVAQRPKNIKKNRYKDILPYDHSLVELSLLTSDEDSSYINASFIKGVYGPKAYIATQGPLSTTLLDFWRMIWEYRILVIVMACMEFEMGKKKCERYWAEPGETQLQFGPFSISCEAEKKKSDYKIRTLKAKFNNETRIIYQFHYKNWPDHDVPSSIDPILQLIWDMRCYQEDDCVPICIHCSAGCGRTGVICAVDYTWMLLKDGIIPKNFSVFNLIQEMRTQRPSLVQTQEQYELVYSAVLELFKRHMDVISDNHLGREIQAQCSIPEQSLTVEADSCPLDLPKNAMRDVKTTNQHSKQGAEAESTGGSSLGLRTSTMNAEEELVLHSAKSSPSFNCLELNCGCNNKAVITRNGQARASPVVGEPLQKYQSLDFGSMLFGSCPSALPINTADRYHNSKGPVKRTKSTPFELIQQRKTNDLAVGDGFSCLESQLHEHYSLRELQVQRVAHVSSEELNYSLPGACDASCVPRHSPGALRVHLYTSLAEDPYFSSSPPNSADSKMSFDLPEKQDGATSPGALLPASSTTSFFYSNPHDSLVMNTLTSFSPPLNQETAVEAPSRRTDDEIPPPLPERTPESFIVVEEAGEPSPRVTESLPLVVTFGASPECSGTSEMKSHDSVGFTPSKNVKLRSPKSDRHQDGSPPPPLPERTLESFFLADEDCIQAQAVQTSSTSYPETTENSTSSKQTLRTPGKSFTRSKSLKIFRNMKKSVCNSSSPSKPTERVQPKNSSSFLNFGFGNRFSKPKGPRNPPSAWNM", - "output": "cytoplasm ; cytoplasmic side of plasma membrane ; nucleus ; perinuclear region of cytoplasm ; kinase binding ; non-membrane spanning protein tyrosine phosphatase activity ; phosphatase activity ; protein tyrosine kinase binding ; protein tyrosine phosphatase activity ; SH3 domain binding ; ubiquitin protein ligase binding ; autophagy ; cellular response to muramyl dipeptide ; lipid metabolic process ; lipopolysaccharide-mediated signaling pathway ; negative regulation of autophagy ; negative regulation of gene expression ; negative regulation of interleukin-6 production ; negative regulation of interleukin-8 production ; negative regulation of JUN kinase activity ; negative regulation of nucleotide-binding oligomerization domain containing 2 signaling pathway ; negative regulation of p38MAPK cascade ; negative regulation of T cell activation ; negative regulation of T cell receptor signaling pathway ; negative regulation of tumor necrosis factor production ; peptidyl-tyrosine dephosphorylation ; phosphoanandamide dephosphorylation ; positive regulation of CD8-positive, alpha-beta T cell proliferation ; positive regulation of defense response to virus by host ; positive regulation of ERK1 and ERK2 cascade ; positive regulation of gene expression ; positive regulation of granzyme B production ; positive regulation of interferon-alpha production ; positive regulation of interferon-beta production ; positive regulation of NLRP3 inflammasome complex assembly ; positive regulation of protein import into nucleus ; positive regulation of protein K63-linked ubiquitination ; positive regulation of toll-like receptor 3 signaling pathway ; positive regulation of toll-like receptor 4 signaling pathway ; positive regulation of toll-like receptor 7 signaling pathway ; positive regulation of toll-like receptor 9 signaling pathway ; positive regulation of type I interferon production ; positive regulation of type II interferon production ; protein dephosphorylation ; regulation of calcium ion transmembrane transport ; regulation of leukocyte migration ; regulation of natural killer cell proliferation ; regulation of NIK/NF-kappaB signaling ; regulation of peptidyl-tyrosine phosphorylation ; response to lipopolysaccharide ; T cell differentiation ; T cell receptor signaling pathway" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MIGRISGLLLEKFPPLVLVDVQGVGYEIDVPMSTFYNLPAVGTQITLHTHFVVREDAHLLFGFATEGERQAFRQLVKISGVGARTALALLSGLSVADLHQTVSNQDPARLIRIPGIGKKTAERLLLELRDKLDLGVSAIPGAAGARRPSTMGSDVLNALLSLGYNDREANWAVSQLSVDLSVSDGIRQALKFLSKEK", - "output": "cytoplasm ; Holliday junction helicase complex ; ATP binding ; DNA binding ; four-way junction helicase activity ; DNA recombination ; DNA repair ; SOS response" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MVDKRESYTKEDLLASGRGELFGAKGPQLPAPNMLMMDRVVKMTETGGNFDKGYVEAELDINPDLWFFGCHFIGDPVMPGCLGLDAMWQLVGFYLGWLGGEGKGRALGVGEVKFTGQVLPTARKVTYRIHFKRIVNRRLIMGLADGEVLVDGRLIYTAHDLKVGLFQDTSAF", - "output": "cytoplasm ; (3R)-3-hydroxydecanoyl- dehydratase activity ; (3R)-hydroxymyristoyl- dehydratase activity ; trans-2-decenoyl-acyl-carrier-protein isomerase activity ; fatty acid biosynthetic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MSGQGKRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPKHGIEIDFIRISGLRGKGIKALIAAPLRIFNAWRQARAIMKAYKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNGIAGLTNKWLAKIATKVMQAFPGAFPNAEVVGNPVRTDVLALPLPQQRLAGREGPVRVLVVGGSQGARILNQTMPQVAAKLGDSVTIWHQSGKSSQQSVEQAYAEAGQPQHKVTEFIDDMAAAYAWADVVVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAGAAKIIEQPQLSVDAVANTLAGWSRETLLTMAERARAASIPDATERVANEVSRAARA", - "output": "plasma membrane ; UDP-N-acetyl-D-glucosamine:N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol 4-beta-N-acetylglucosaminlytransferase activity ; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity ; carbohydrate metabolic process ; cell cycle ; cell division ; cell wall organization ; lipid glycosylation ; peptidoglycan biosynthetic process ; regulation of cell shape" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MQFTIFTHLTMALSYAVPILIAVAFLTLVERKVLSYMQARKGPNIVGPFGLLQPVADGVKLFIKEPVRPTTSSPILFIATPILALLLAITIWIPLPLPFSLTDLNLGLLFLLSMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVIMLSGNYTLNTLATTQEPLYLIFSTWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMLMNTLTAILFLNPSSLNLPSELFPLILATKTLLLSSGFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCLWHTSLPISYAGIPPHL", - "output": "mitochondrial inner membrane ; respirasome ; NADH dehydrogenase (ubiquinone) activity" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MQKRAIYPGTFDPITNGHIDIVTRATQMFDHVILAIAASPSKKPMFTLEERVALAQQATAHLGNVEVVGFSDLMANFARNQHATVLIRGLRAVADFEYEMQLAHMNRHLMPELESVFLMPSKEWSFISSSLVKEVARHQGDVTHFLPENVHQALMAKLA", - "output": "cytoplasm ; ATP binding ; identical protein binding ; pantetheine-phosphate adenylyltransferase activity ; coenzyme A biosynthetic process" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MQIPKPNNSTWTDDQWEAIVSEGQDILVAAAAGSGKTAVLVERLIRKMTRPEHPVDVDRLLVVTFTNASAAEMKHRITEALEKELAKNPGSLHMRRQLSLMNRANISTLHSFCLQVLRTFYYEIDLDPGFRLADQTEGELLGDEVLDELFEDEYKAGKPSFFELVDRYTSDRHDLDLQWLVKRIYDFSRSHPSPEQWMRAFLSLYDVDAQTKVEELPFYPYIKEDLSLVLRSCQELLERALSLSKEPGGPAPRAENFIDDLEQVNELIRHQDDFEKLYELLPNVNFKRLKTCKGDEYDPVLLEKATDARNQAKKQLEKLKDEYFMRSPAQHLKSLAEMKPIVETLVELVIQFGERFERAKQEKSIVDFSDLEHYCLRILAEQDAEGHLIETEAAKYYQQQFEEVLVDEYQDTNLVQETILKLVSKGEHSSEGNLFMVGDVKQSIYRFRLAEPMLFLNKYKHFQPDGKETGKRIDLNKNFRSRSDVLDSTNFLFKQLMGETVGEIEYDEQAELKLGASYPESKDTTTEMLLVHLDQQEAETGEEREELETVQFEARIIAKKIKELVEQPFQVYDAKQQMTRNLQYRDIVILLRSMPWAPQMMEELKKQGIPVYANLSSGYFEATEVSVILSLLKVIDNPYQDIPLAAVLRSPLVHLDENELALIRTSDKKGTYYDAVKAFMSVTHSDHPTCKKLERFFQLLRKWRDFSINHSVAELIWEVYRDTQYLDYVGGMPGGKQRQANLRALYDRAKQYEKAAFRGLFRFLRFIERMQERGDDLGAAKTFSETEDVVRMMTIHSSKGLEFPVVFTVGLGRNFNMMDLNQSYLLDKELGFGSKYIHPELRISYATLPLVAMKKKMRKELLSEELRVLYVALTRAKEKLFLVGSVKNQVKALSKWQNAATGEEWLLPDFERYQSKTYLDFIGPALIRHQAMSSVLEETGDVVLSHPSTFTISFTQASDLLKEDMSLEKKEQDEIVQALMDGLPVEGYGDADEKVAERLSWKYPYLAASQVGTKQSVSEIKRMKEIQDEYSVPSSIRKARATLYDRPAFMKKKTLTAAEQGTAMHTVMQHIPLPSEEPYDESRIGHLLDSLQQRDLLTDEQVQSINQEGIAAFFSTSIGQKLLKADWVKREVSFSMVLPVKEVYSHIDTEGEPVLIQGMIDCLFETDGKLYLLDYKTDRVQGRYTGGIDAAVPILKKRYETQIALYAKAVERLTNRTLEEKILYFFDGNVEISL", - "output": "3'-5' exonuclease activity ; ATP binding ; ATP hydrolysis activity ; DNA helicase activity ; double-stranded DNA binding ; isomerase activity ; double-strand break repair via homologous recombination" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MTTESLETLVEQLSGLTVLELSQLKKLLEEKWDVTAAAPVVAVAGAAAAGDAPASAEPTEFAVILEDVPSDKKIGVLKVVREVTGLALKEAKEMTEGLPKTVKEKTSKSDAEDTVKKLQEAGAKAVAKGL", - "output": "ribonucleoprotein complex ; ribosome ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MPELPEVETVCRGLEKLIIGKKISSIEIRYPKMIKTDLEEFQRELPSQIIESMGRRGKYLLFYLTDKVLISHLRMEGKYFYYPDQGPERKHAHVFFHFEDGGTLVYEDVRKFGTMELLVPDLLDAYFISKKLGPEPSEQDFDLQVFQAALAKSKKPIKSHLLDQTLVAGLGNIYVDEVLWRAQVHPARPSQTLTAEEATAIHDQTIAVLGQAVEKGGSTIRTYTNAFGEDGSMQDFHQVYDKTGQECVRCGTIIEKIQLGGRGTHFCPNCQRRD", - "output": "8-oxo-7,8-dihydroguanine DNA N-glycosylase activity ; class I DNA-(apurinic or apyrimidinic site) endonuclease activity ; damaged DNA binding ; DNA-(apurinic or apyrimidinic site) endonuclease activity ; zinc ion binding ; base-excision repair" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MQRVQPSAARVKSQKKEKAPPDVPDVILDGERKTRYEKGKFLGKGGFAHCYELRNKSTGELFAGKVVPKALLIKQYQRDKMAQEVQIHRNLQHRNVVKLYHFFEDKSNVYITLELCPRRSLMELHKRRKAVTEPEARYFTYQIVEGVLYLHNLKIVHRDLKLGNLFLNDELQVKIGDFGLATTCDNDERKKTLCGTPNYIAPEVLNKIGHSFEVDLWAIGCILYILLFGHPPFESKSLEETYSRIKNNNYVIPTSASAAASQLIRVLLDPVPSRRPNARAVCRDHFFKSGFMPARLPVSCLTMVPHLNDDEYAEENVSPSGTIDQRGPHQAGRSGLSAIPAHLVSRNSERQQTHRMEAYRQPTDCYLSNLLAQVNDLLATPTADIDDAEAALDSYQSPEALPVFWISKWVDYSDKYGIGYQLCDNSVGVLFNDNSRIMLDTAGTQLTYIEKTEKEHYFDMESAIPSGLQKKMTLLKYFRSYMNDHLLQAGQQVTRKVGDDLARLPTLRVWFRTKSAIVLHLSNGTVQINFFNDHIKMVLCPLMQAVTFIDENKRMFTYKFSHLAENGCPEKFLHRIQYAKCMIQRLVEEHTKEETKHNAPAANAVRLPSTSSNVRLESAADIQPAYPSSSRR", - "output": "centrosome ; cytoplasm ; kinetochore ; nucleus ; spindle pole ; ATP binding ; protein serine kinase activity ; protein serine/threonine kinase activity ; meiotic cell cycle ; mitotic spindle organization ; protein phosphorylation ; regulation of meiosis I" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MSQPLFTATVSAVGGREGKVISSDRVLELDVAMPGTPRAKKLEKATNPEQLFAAGYAACFDSALQLVARTERVKVETEVTANVSLLKDEADQGYKLGVTLQVKGEGVSASELEALVKKAHGVCPYSKATSGNIDVTLEVAE", - "output": "response to oxidative stress" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MSPIIDALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLVVAQLLFLESENPDKDIFLYINSPGGSVTAGMSIYDTMQFIKPNVSTVCMGQACSMGAFLLAGGAPGKRYVLPNSRVMIHQPLGGFQGQASDIQIHAQEILTIKTKLNKLLAEHTGQPLEVIERDTDRDNFMSADQAVEYGLVDAVLTHRSA", - "output": "cytoplasm ; ATP-dependent peptidase activity ; serine-type endopeptidase activity ; proteolysis" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MAKKGAGATRGISPVRPTRAIPIGAYLTVADNSGAKVIQVIGVVEYHGTRRRLASAGVGDMVVATVKKGRPDMRHQVVRAVIIRQRKEYRRLDGMRVKFEDNAAVIVTPEGVPRGTEIRGPVAREAAEKWVRIGSIASIIV", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MAPPLSPGSRVLIALIRVYQRLISPLLGPHCRFTPTCSSYGIEALRRFGVIKGSWLTVKRVLKCHPLHPGGDDPVPPGPFDTREH", - "output": "plasma membrane" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MGDAEGEDEVQFLRTDDEVVLQCSATVLKEQLKLCLAAEGFGNRLCFLEPTSNAQNVPPDLAICCFVLEQSLSVRALQEMLANTVEAGVESSQGGGHRTLLYGHAILLRHAHSRMYLSCLTTSRSMTDKLAFDVGLQEDATGEACWWTMHPASKQRSEGEKVRVGDDIILVSVSSERYLHLSTASGELQVDASFMQTLWNMNPICSRCEEGFVTGGHVLRLFHGHMDECLTISPADSDDQRRLVYYEGGAVCTHARSLWRLEPLRISWSGSHLRWGQPLRVRHVTTGQYLALTEDQGLVVVDASKAHTKATSFCFRISKEKLDVAPKRDVEGMGPPEIKYGESLCFVQHVASGLWLTYAAPDPKALRLGVLKKKAMLHQEGHMDDALSLTRCQQEESQAARMIHSTNGLYNQFIKSLDSFSGKPRGSGPPAGTALPIEGVILSLQDLIIYFEPPSEDLQHEEKQSKLRSLRNRQSLFQEEGMLSMVLNCIDRLNVYTTAAHFAEFAGEEAAESWKEIVNLLYELLASLIRGNRSNCALFSTNLDWLVSKLDRLEASSGILEVLYCVLIESPEVLNIIQENHIKSIISLLDKHGRNHKVLDVLCSLCVCNGVAVRSNQDLITENLLPGRELLLQTNLINYVTSIRPNIFVGRAEGTTQYSKWYFEVMVDEVTPFLTAQATHLRVGWALTEGYTPYPGAGEGWGGNGVGDDLYSYGFDGLHLWTGHVARPVTSPGQHLLAPEDVISCCLDLSVPSISFRINGCPVQGVFESFNLDGLFFPVVSFSAGVKVRFLLGGRHGEFKFLPPPGYAPCHEAVLPRERLHLEPIKEYRREGPRGPHLVGPSRCLSHTDFVPCPVDTVQIVLPPHLERIREKLAENIHELWALTRIEQGWTYGPVRDDNKRLHPCLVDFHSLPEPERNYNLQMSGETLKTLLALGCHVGMADEKAEDNLKKTKLPKTYMMSNGYKPAPLDLSHVRLTPAQTTLVDRLAENGHNVWARDRVGQGWSYSAVQDIPARRNPRLVPYRLLDEATKRSNRDSLCQAVRTLLGYGYNIEPPDQEPSQVENQSRCDRVRIFRAEKSYTVQSGRWYFEFEAVTTGEMRVGWARPELRPDVELGADELAYVFNGHRGQRWHLGSEPFGRPWQPGDVVGCMIDLTENTIIFTLNGEVLMSDSGSETAFREIEIGDGFLPVCSLGPGQVGHLNLGQDVSSLRFFAICGLQEGFEPFAINMQRPVTTWFSKGLPQFEPVPLEHPHYEVSRVDGTVDTPPCLRLTHRTWGSQNSLVEMLFLRLSLPVQFHQHFRCTAGATPLAPPGLQPPAEDEARAAEPDPDYENLRRSAGGWSEAENGKEGTAKEGAPGGTPQAGGEAQPARAENEKDATTEKNKKRGFLFKAKKVAMMTQPPATPTLPRLPHDVVPADNRDDPEIILNTTTYYYSVRVFAGQEPSCVWAGWVTPDYHQHDMSFDLSKVRVVTVTMGDEQGNVHSSLKCSNCYMVWGGDFVSPGQQGRISHTDLVIGCLVDLATGLMTFTANGKESNTFFQVEPNTKLFPAVFVLPTHQNVIQFELGKQKNIMPLSAAMFQSERKNPAPQCPPRLEMQMLMPVSWSRMPNHFLQVETRRAGERLGWAVQCQEPLTMMALHIPEENRCMDILELSERLDLQRFHSHTLRLYRAVCALGNNRVAHALCSHVDQAQLLHALEDAHLPGPLRAGYYDLLISIHLESACRSRRSMLSEYIVPLTPETRAITLFPPGRSTENGHPRHGLPGVGVTTSLRPPHHFSPPCFVAALPAAGAAEAPARLSPAIPLEALRDKALRMLGEAVRDGGQHARDPVGGSVEFQFVPVLKLVSTLLVMGIFGDEDVKQILKMIEPEVFTEEEEEEDEEEEGEEEDEEEKEEDEEETAQEKEDEEKEEEEAAEGEKEEGLEEGLLQMKLPESVKLQMCHLLEYFCDQELQHRVESLAAFAERYVDKLQANQRSRYGLLIKAFSMTAAETARRTREFRSPPQEQINMLLQFKDGTDEEDCPLPEEIRQDLLDFHQDLLAHCGIQLDGEEEEPEEETTLGSRLMSLLEKVRLVKKKEEKPEEERSAEESKPRSLQELVSHMVVRWAQEDFVQSPELVRAMFSLLHRQYDGLGELLRALPRAYTISPSSVEDTMSLLECLGQIRSLLIVQMGPQEENLMIQSIGNIMNNKVFYQHPNLMRALGMHETVMEVMVNVLGGGESKEIRFPKMVTSCCRFLCYFCRISRQNQRSMFDHLSYLLENSGIGLGMQGSTPLDVAAASVIDNNELALALQEQDLEKVVSYLAGCGLQSCPMLVAKGYPDIGWNPCGGERYLDFLRFAVFVNGESVEENANVVVRLLIRKPECFGPALRGEGGSGLLAAIEEAIRISEDPARDGPGIRRDRRREHFGEEPPEENRVHLGHAIMSFYAALIDLLGRCAPEMHLIQAGKGEALRIRAILRSLVPLEDLVGIISLPLQIPTLGKDGALVQPKMSASFVPDHKASMVLFLDRVYGIENQDFLLHVLDVGFLPDMRAAASLDTATFSTTEMALALNRYLCLAVLPLITKCAPLFAGTEHRAIMVDSMLHTVYRLSRGRSLTKAQRDVIEDCLMSLCRYIRPSMLQHLLRRLVFDVPILNEFAKMPLKLLTNHYERCWKYYCLPTGWANFGVTSEEELHLTRKLFWGIFDSLAHKKYDPELYRMAMPCLCAIAGALPPDYVDASYSSKAEKKATVDAEGNFDPRPVETLNVIIPEKLDSFINKFAEYTHEKWAFDKIQNNWSYGENIDEELKTHPMLRPYKTFSEKDKEIYRWPIKESLKAMIAWEWTIEKAREGEEEKTEKKKTRKISQSAQTYDPREGYNPQPPDLSAVTLSRELQAMAEQLAENYHNTWGRKKKQELEAKGGGTHPLLVPYDTLTAKEKARDREKAQELLKFLQMNGYAVTRGLKDMELDSSSIEKRFAFGFLQQLLRWMDISQEFIAHLEAVVSSGRVEKSPHEQEIKFFAKILLPLINQYFTNHCLYFLSTPAKVLGSGGHASNKEKEMITSLFCKLAALVRHRVSLFGTDAPAVVNCLHILARSLDARTVMKSGPEIVKAGLRSFFESASEDIEKMVENLRLGKVSQARTQVKGVGQNLTYTTVALLPVLTTLFQHIAQHQFGDDVILDDVQVSCYRTLCSIYSLGTTKNTYVEKLRPALGECLARLAAAMPVAFLEPQLNEYNACSVYTTKSPRERAILGLPNSVEEMCPDIPVLERLMADIGGLAESGARYTEMPHVIEITLPMLCSYLPRWWERGPEAPPSALPAGAPPPCTAVTSDHLNSLLGNILRIIVNNLGIDEASWMKRLAVFAQPIVSRARPELLQSHFIPTIGRLRKRAGKVVSEEEQLRLEAKAEAQEGELLVRDEFSVLCRDLYALYPLLIRYVDNNRAQWLTEPNPSAEELFRMVGEIFIYWSKSHNFKREEQNFVVQNEINNMSFLTADNKSKMAKAGDIQSGGSDQERTKKKRRGDRYSVQTSLIVATLKKMLPIGLNMCAPTDQDLITLAKTRYALKDTDEEVREFLHNNLHLQGKVEGSPSLRWQMALYRGVPGREEDADDPEKIVRRVQEVSAVLYYLDQTEHPYKSKKAVWHKLLSKQRRRAVVACFRMTPLYNLPTHRACNMFLESYKAAWILTEDHSFEDRMIDDLSKAGEQEEEEEEVEEKKPDPLHQLVLHFSRTALTEKSKLDEDYLYMAYADIMAKSCHLEEGGENGEAEEEVEVSFEEKQMEKQRLLYQQARLHTRGAAEMVLQMISACKGETGAMVSSTLKLGISILNGGNAEVQQKMLDYLKDKKEVGFFQSIQALMQTCSVLDLNAFERQNKAEGLGMVNEDGTVINRQNGEKVMADDEFTQDLFRFLQLLCEGHNNDFQNYLRTQTGNTTTINIIICTVDYLLRLQESISDFYWYYSGKDVIEEQGKRNFSKAMSVAKQVFNSLTEYIQGPCTGNQQSLAHSRLWDAVVGFLHVFAHMMMKLAQDSSQIELLKELLDLQKDMVVMLLSLLEGNVVNGMIARQMVDMLVESSSNVEMILKFFDMFLKLKDIVGSEAFQDYVTDPRGLISKKDFQKAMDSQKQFSGPEIQFLLSCSEADENEMINCEEFANRFQEPARDIGFNVAVLLTNLSEHVPHDPRLHNFLELAESILEYFRPYLGRIEIMGASRRIERIYFEISETNRAQWEMPQVKESKRQFIFDVVNEGGEAEKMELFVSFCEDTIFEMQIAAQISEPEGEPETDEDEGAGAAEAGAEGAEEGAAGLEGTAATAAAGATARVVAAAGRALRGLSYRSLRRRVRRLRRLTAREAATAVAALLWAAVTRAGAAGAGAAAGALGLLWGSLFGGGLVEGAKKVTVTELLAGMPDPTSDEVHGEQPAGPGGDADGEGASEGAGDAAEGAGDEEEAVHEAGPGGADGAVAVTDGGPFRPEGAGGLGDMGDTTPAEPPTPEGSPILKRKLGVDGVEEELPPEPEPEPEPELEPEKADAENGEKEEVPEPTPEPPKKQAPPSPPPKKEEAGGEFWGELEVQRVKFLNYLSRNFYTLRFLALFLAFAINFILLFYKVSDSPPGEDDMEGSAAGDVSGAGSGGSSGWGLGAGEEAEGDEDENMVYYFLEESTGYMEPALRCLSLLHTLVAFLCIIGYNCLKVPLVIFKREKELARKLEFDGLYITEQPEDDDVKGQWDRLVLNTPSFPSNYWDKFVKRKVLDKHGDIYGRERIAELLGMDLATLEITAHNERKPNPPPGLLTWLMSIDVKYQIWKFGVIFTDNSFLYLGWYMVMSLLGHYNNFFFAAHLLDIAMGVKTLRTILSSVTHNGKQLVMTVGLLAVVVYLYTVVAFNFFRKFYNKSEDEDEPDMKCDDMMTCYLFHMYVGVRAGGGIGDEIEDPAGDEYELYRVVFDITFFFFVIVILLAIIQGLIIDAFGELRDQQEQVKEDMETKCFICGIGSDYFDTTPHGFETHTLEEHNLANYMFFLMYLINKDETEHTGQESYVWKMYQERCWDFFPAGDCFRKQYEDQLS", - "output": "calcium channel complex ; cell cortex ; cytoplasm ; extracellular exosome ; I band ; junctional sarcoplasmic reticulum membrane ; organelle membrane ; plasma membrane ; ryanodine receptor complex ; sarcolemma ; sarcoplasmic reticulum ; sarcoplasmic reticulum membrane ; smooth endoplasmic reticulum ; terminal cisterna ; Z disc ; ATP binding ; calcium channel activity ; calcium ion binding ; calcium-induced calcium release activity ; calcium-release channel activity ; calmodulin binding ; ryanodine-sensitive calcium-release channel activity ; voltage-gated calcium channel activity ; calcium ion transport ; cellular response to caffeine ; cellular response to calcium ion ; muscle contraction ; ossification involved in bone maturation ; outflow tract morphogenesis ; protein homotetramerization ; regulation of cytosolic calcium ion concentration ; release of sequestered calcium ion into cytosol ; release of sequestered calcium ion into cytosol by sarcoplasmic reticulum ; response to caffeine ; response to hypoxia ; skeletal muscle fiber development ; skin development ; striated muscle contraction" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MSQFNQNNKQIDVMGIRKILPHRYPFALLDKIVDWSVEDRTIVAQKNVTINEDFFNGHFPDFPVMPGVLIVEAMAQATAILGELMAETLFAHVVEKAGGGRRTFMLAGIDKVRVKRPVVPGDVLVIESRMVKQKNIICTAESVAKVDGQIVCSAELMAAYKDY", - "output": "cytoplasm ; (3R)-hydroxyacyl- dehydratase activity ; (3R)-hydroxymyristoyl- dehydratase activity ; fatty acid biosynthetic process ; lipid A biosynthetic process" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MVRILRWFIRLYQIAISPLLGPRCRYIPTCSQYALEALQTHGAIKGVWLSSKRICRCHPWGGSGYDPVPLKAIRFISFHQIDSQTHHVAVPFRDRLMKQNLSNHLG", - "output": "plasma membrane" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MTTFSSFPSIFVPLVGLVFPAIAMASLSLYVQKTKIF", - "output": "chloroplast thylakoid membrane ; photosystem I ; photosynthesis" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MKPTTIASLQKCKQEKKRFATITAYDYSFAKLFAEEGLNVMLVGDSLGMTVQGHESTLPVTVEDIAYHTTAVRRGAPNCLLLADLPFMAYATPEQAFENAATVMRAGANMVKIEGGEWLVETVKMLTERAVPVCGHLGLTPQSVNIFGGYKVQGRGDEASDRLLSDALALEAAGAQLLVLECVPVELAKRITEALAIPVIGIGAGNVTDGQILVMHDAFGITGGHIPKFAKNFLAETGDIRAAVRQYMAEVESGVYPGEEHSFH", - "output": "cytoplasm ; 3-methyl-2-oxobutanoate hydroxymethyltransferase activity ; metal ion binding ; pantothenate biosynthetic process" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MLLIVGLGNPGAKYQGNRHNIGFMAVDAIHRRHSFSPWAKKFRAEISEGELGGQKVLLIKPQTFMNLSGESVGEAMRFYKLEPSDLVVIYDELDLPAAKARLKTGGGHGGHNGIKSIDAHCGREYRRLRLGIGHPGVKELVQNHVLGDFAKVDRDWLEPLFDALADNADMLVRGEDSQLMNKIALALGGKTEEPAPKPEKKTVAKSHIHQARNHNQPRMPESGPMAEMLKRMFGKKDD", - "output": "cytoplasm ; aminoacyl-tRNA hydrolase activity ; translation" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MNTEIPDLEKQQIDHNSGSDDPQPIHDDMAPVSRIRSSGPNHEYIHIADQKFHRDDFYRAFGGTLNPGGAPQPSRKFGNPAPLGLSAFALTTLVFSLCTVQARGVPNPSIAVGLALFYGGVCQFAAGMWEFVQENTFGAAALTSYGGFWMSWAAIEMNAFGIKDSYNDPIEVQNAVGIYLFGWFIFTLMLTLCTLKSTVAFFGLFFMLMMTFLVLACANVTQHHGTAIGGGWLGIITAFFGFYNAYAGLANPGNSYIVPVPLDMPFVKKD", - "output": "plasma membrane ; acetate transmembrane transporter activity" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MLDIQLLRKDLDGVAKRLADRGYPLDVAAFSALEAERRAIQTRTEELQARRNSLSKQIGAMKGRGEDTSAVMAEVGGIGDEMKASAVKLDEIQARLSELMLEMPNVPHESVPVGRDETENVEVRRWGAPRQFDFDVKDHVDVGTPLGLDFETGAKLSGARFTVLRGPIARLHRALAQFMLDTHTQQHGYSETYTPYIVNPDVLYGTGQLPKFAEDMFRVEKGGAENTVTQYLISTSEISLTNTVRDSIVEASALPIKLTAHSPCFRSEAGSYGRDTRGMIRQHQFDKVEMVQIVAPEASYAALDEMVGHAEAILQKLELPYRVVALCTGDMGFSAAKTFDLEVWLPAQNTYREISSCSNTESFQARRMQARFRNAQGKPELVHTLNGSGLAVGRTLVAVLENYQNADGSVTVPVALRPYMGGVERIDAPSSAA", - "output": "cytoplasm ; ATP binding ; serine-tRNA ligase activity ; selenocysteine biosynthetic process ; seryl-tRNA aminoacylation" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MFPGSVIRKLSHSEEVFAQYEVFTSMTIQLRGVIDVDALSDAFDALLETHPVLASHLEQSSDGGWNLVADDLLHSGICVIDGTAATNGSPSGNAELRLDQSVSLLHLQLILREGGAELTLYLHHCMADGHHGAVLVDELFSRYTDAVTTGDPGPITPQPTPLSMEAVLAQRGIRKQGLSGAERFMSVMYAYEIPATETPAVLAHPGLPQAVPVTRLWLSKQQTSDLMAFGREHRLSLNAVVAAAILLTEWQLRNTPHVPIPYVYPVDLRFVLAPPVAPTEATNLLGAASYLAEIGPNTDIVDLASDIVATLRADLANGVIQQSGLHFGTAFEGTPPGLPPLVFCTDATSFPTMRTPPGLEIEDIKGQFYCSISVPLDLYSCAVYAGQLIIEHHGHIAEPGKSLEAIRSLLCTVPSEYGWIME", - "output": "cytosol ; acyltransferase activity, transferring groups other than amino-acyl groups ; O-acyltransferase activity ; transferase activity ; DIM/DIP cell wall layer assembly ; lipid biosynthetic process" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MSFPSSAASPARSEQAVPEGAAKEPMVTFEGVTKTFGGADGKPGFAALAGIDYTVPKGSITCIIGRSGAGKSTLIRLANGLEKPSTGRVVVDGVDVAALDEKSLRTLRRSVGMIFQHFNLLSSRTAFDNVALPLEIAGLGKKEIEARVAPLLDLVGLSDKAKRYPAELSGGQKQRVGIARALATQPKLLLSDEATSALDPETTQSILELLKRINAELGLTVLLITHEMEVVKTIASQVAVIDRGLIVEEGTTFDIFTAPKHETTRSLLSSSVGVKLPHWVTSGLKQEATDGDRVLVRLVFFGETAFQPLTARLVAEIGPDVNILAGTIEEISGQPFGSLVVSYPASAEVTARANRFYAETGLHTEVLGYVA", - "output": "plasma membrane ; ABC-type D-methionine transporter activity ; ATP binding ; ATP hydrolysis activity" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MPSPTKAAEAATKATATSDCSCSAASVEQRAPSNAANPSSSLATSGKIGGKTQDQTAAINKQKEFAVPNETSDSGFISGPQSSQIFSEEIVPDSEEQDKDQQESAPQKEQPVVLDSGIIDEEEDQEEQEKEEEHQDTTTATADSMRLKHSADTGIPQWTVESHLVSRGEQLNNLGQSSSTQITGRSKVQSSTASTANANPSGSGATSSAPPSSINIMNAWEQFYQQNDDGDTPLHLACISGSVDVVAALIRMAPHPCLLNIQNDVAQTPLHLAALTAQPNIMRILLLAGAEPTVRDRHGNTALHLSCIAGEKQCVRALTEKFGATEIHEAHRQYGHRSNDKAVSSLSYACLPADLEIRNYDGERCVHLAAEAGHIDILRILVSHGADINAREGKSGRTPLHIAIEGCNEDLANFLLDECEKLNLETATYAGLTAYQFACIMNKSRMQNILEKRGAETVTPPDSDYDSSDIEDLDDTKMYDRFGDPRYFVSYNGGNPMTVA", - "output": "cytoplasm ; cytosol ; neuromuscular junction ; subsynaptic reticulum ; NF-kappaB binding ; antimicrobial humoral response ; cellular response to tumor necrosis factor ; cytoplasmic sequestering of NF-kappaB ; dorsal appendage formation ; dorsal/ventral axis specification ; dorsal/ventral pattern formation ; negative regulation of antifungal peptide production ; negative regulation of hemocyte differentiation ; negative regulation of Toll signaling pathway ; nervous system development ; oogenesis" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MEHYISLLVKSIFIENMALSFFLGMCTFLAVSKKVKTSFGLGVAVVVVLTIAVPVNNLVYTYLLKENALVAGVDLTFLSFITFIGVIAALVQILEMILDRFFPPLYNALGIFLPLITVNCAIFGGVSFMVQRDYNFAESVVYGFGSGIGWMLAIVALAGIREKMKYSDVPPGLRGLGITFITVGLMALGFMSFSGVQL", - "output": "Gram-negative-bacterium-type cell wall ; plasma membrane ; oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor ; respiratory electron transport chain ; sodium ion transport" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MFTINAEVRKEQGKGASRRLRAANKFPAIIYGGSEAPIAIELDHDQVMNMQAKAEFYSEVLTLVVDGKEVKVKAQAVQRHAYKPKLTHIDFVRA", - "output": "ribonucleoprotein complex ; ribosome ; 5S rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MDHILALVLALLPLSLCVALPGALDAMDVEKMKSKVTWKAQGLVARIDKHFPDRGLRFDTDKVEGSTSVVASLESYNNLISDRFGGVSQIKTEISSLAGYLNHWREGNCQEQQPKVWPRRNIFNHTVSLEALMRVREFLKLLQKNVDLLERC", - "output": "extracellular region" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "LKCKKLVPLFSKTCPPGKNLCYKMFMVAAPKVPVKRGCINVCPKSSLLVKYVCCNTDKCN", - "output": "extracellular region ; membrane ; other organism cell membrane ; toxin activity ; killing of cells of another organism" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MEAKAVARTIRIAPRKVRLVLDLIRGKNAAEAIAILKLTNKASSPVIEKVLMSALANAEHNYDMNTDELVVKEAYANEGPTLKRFRPRAQGRASAINKRTSHITIVVSDGKEEAKEA", - "output": "large ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MAGWQSYVDNLMCDGCCQEAAIVGYCDAKYVWAATAGGVFQSITPVEIDMIVGKDREGFFTNGLTLGAKKCSVIRDSLYVDGDCTMDIRTKSQGGEPTYNVAVGRAGRVLVFVMGKEGVHGGGLNKKAYSMAKYLRDSGF", - "output": "cytoplasm ; cytoskeleton ; cytosol ; glutamatergic synapse ; postsynapse ; presynapse ; Schaffer collateral - CA1 synapse ; actin binding ; actin monomer binding ; ATP hydrolysis activity ; phosphatidylinositol-4,5-bisphosphate binding ; actin cytoskeleton organization ; modification of postsynaptic actin cytoskeleton ; modulation of chemical synaptic transmission ; negative regulation of actin filament polymerization ; negative regulation of epithelial cell migration ; negative regulation of ruffle assembly ; positive regulation of actin filament bundle assembly ; positive regulation of actin filament polymerization ; positive regulation of ATP-dependent activity ; positive regulation of peptidyl-serine phosphorylation ; positive regulation of stress fiber assembly ; presynaptic modulation of chemical synaptic transmission ; protein stabilization ; regulation of actin filament polymerization ; regulation of synaptic vesicle exocytosis" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MMDKRVVAVAAVLWNVQMLFAAGEVIVPEGYASYYAESFNGRPTASGEIFDMNAYTAAHRTLPFGTVVELTNLDNGKKVIVRINDRGPYAANREIDVSKAAAVALDMLNAGVARVSIHKADPNAHASQQRNDRQTSPGVLPQDSFGVPPTAPTSSAPVMYADPHNPPPAPVGRRAGTPGVPGVANTTDVPASEYGAPPVAYAAPGSTPSRVPYGTAVPGSAAPNSHAQPVPSSSSYAAAAPLPYAAGGGKVSGMKSVYTPTHSGETRGVLWRIQLGAFVREENALRLVVKCARRALILHMSEQSTRCAWCCRGYAPRT", - "output": "lytic endotransglycosylase activity ; cell wall organization ; peptidoglycan metabolic process" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MFFVTPAYAEEAPAAATGTDAHAAPAAGEVHTETGVAEGEHARGPFPPFDSTTYASQLLWLVITFGVFYLLMQKVIAPRIGAILDQRHKRISQDLEEAGRLKAEADAAVQTYEGELAAARAKSHAIGSAARDAAKVKAEEDRRTVEASLSEKIKAAEARIADIKAKAFADVGTIAEETAAAVVEQLIGSTAAQADVAAAVAAAKKEV", - "output": "plasma membrane ; proton-transporting ATP synthase complex, coupling factor F(o) ; proton-transporting ATP synthase activity, rotational mechanism" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "RIRARYPIIAAHLAPGSESRFDFQKYVNRSLEDDFKVVVGISPILWFFAVLFLLSNTHGWVAYLWLPFIPLIIILVVGTKLQVIITQLGLSIQDRGDVVKGAPVVQPGDDLFWFGRPRLVLFLIHFCLFQNAFQLAFFIWSVYEFGIKTCFHEKTEDIVRASGLVPNRDTSATQTTELSKGKLMMADTCLPTEDLVGMVVTAAHSGKRFFVDSIRYD", - "output": "membrane ; defense response ; response to biotic stimulus" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MAAVTFASAITNAITSKPALTGMVQFGSFPPMPLRSTTVTTVATSVAQPKLYTVQFGSLDPVVVKSGAGSLAKATRQQPNVEIDVSLSEAAALEVAKPRSNAVLRMHEEANKERALFLDWEASLKRSSYGIAEDEKVVMTTHGVSKIVPRSSRAMKLKRARERRRAQQPIILKWEPKLSGISIGGGLSASVIEAEEVRTKWPLHKTPSMKKRTVHRICKMNDQGVDMLTRSLVKIFKTKSANIEYIGKKSIKVDFIRKERTKFARIQVAHLLGKRAQRDLLTGMEENHFIDILSKYSGNKTTINPGVVCAGWSGIVVGNGILTQKRSRSPSEAFVIRGEHEGKLYDARIKVTRTMSHKIVHFSAAGANFWKGFDRCFLAYRSDNREHTCYSGLDVTECGEVAALMCLAMFPCGKITCPDCVTDSELSQGQASGPSMKHRLTQLRDVIKSSYPRFKHAVQILDRYEQSLSSANENYQDFAEIQSISDGVEKAAFPHVNKLNAILIKGATVTGEEFSQATKHLLEIARYLKNRTENIEKGSLKSFRNKISQKAHINPTLMCDNQLDRNGNFIWGERGYHAKRFFSNYFEIIDPKKGYTQYETRAVPNGSRKLAIGKLIVPTNFEVLREQMKGEPVEPYPVTVECVSKLQGDFVHACCCVTTESGDPVLSEIKMPTKHHLVIGNSGDPKYIDLPEIEENKMYIAKEGYCYINIFLAMLVNVKESQAKEFTKVVRDKLVGELGKWPTLLDVATACYFLKVFYPDVANAELPRMLVDHKTKIIHVVDSYGSLSTGYHVLKTNTVEQLIKFTRCNLESSLKHYRVGGTEWEDTHGSSNIDNPQWCIKRLIKGVYKPKQLKEDMLANPFLPLYALLSPGVILAFYNSGSLEYLMNHYIRVDSNVAVLLVVLKSLAKKVSTSQSVLAQLQIIERSLPELIEAKANVNGPDDAATRACNRFMGMLLHMAEPNWELADGGYTILRDHSISILEKKLSTNLGRSMERVKLVGALCYKILLVKASNLYTERFANEKRSRFRRQIQRVSHVILRTE", - "output": "host cell plasmodesma ; cysteine-type endopeptidase activity ; serine-type peptidase activity ; proteolysis ; transport of virus in host, cell to cell" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MMFRVTSVGCLLLVIVFLNLVVPTSACRAEGTYCENDSQCCLNECCWGGCGHPCRHPGKRSKLQEFFRQR", - "output": "extracellular region ; potassium channel regulator activity ; toxin activity" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MTVHLIADSATDLPRSYFEEKGIGFIPLRVSLGDKEFEDAVTIHADQIFEAMQNGETPKTSQASPQTIKNVFLQYAETGDPALYIAFSSGLSGTYQTAVMIANEVKEEFPDFDLRVIDSKCASLGYGLAVRHAADLCINGNTIQEIETSVKNFCSQLEHIFTVDDLTYLARGGRISKTSAFVGGLLNIKPLLQMEDGKLVPLEKIRGQKKLFKRIIELMKERGDDWSNQTVGISYAANKEKATDMKHLIEEAFKPKEIIMHPISSAIGSHAGPGTLAIFFLRK", - "output": "lipid binding" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MPVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRSA", - "output": "plasma membrane ; regulation of gene expression" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MAASLSSRLIKGIANLKAVRSSRLTSASVYQNGMMRFSSTVPSDSDTHDDFKPTQKVPPDSTDSLKDIVENDVKDNPVMIYMKGVPESPQCGFSSLAVRVLQQYNVPISSRNILEDQELKNAVKSFSHWPTFPQIFIKGEFIGGSDIILNMHKEGELEQKLKDVSGNQD", - "output": "cytosol ; mitochondrial matrix ; mitochondrion ; 2 iron, 2 sulfur cluster binding ; disulfide oxidoreductase activity ; metal ion binding ; protein lipoylation" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MAAAMVAAVHGVGRQDRSSPGGGGAPQVDTGKYVRYTPEQVEALERVYGECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSRLVYENGYMRQQLHNPSVATTDTSCESVVTSGQHHQQQNPAATRPQRDANNPAGLLAIAEETLAEFLSKATGTAVDWVQMVGMKPGPDSIGIIAVSHNCSGVAARACGLVSLEPTKVAEILKDRPSWYRDCRCVDVLHVIPTGNGGTIELIYMQTYAPTTLAAPRDFWILRYTSGLEDGSLVICERSLTQSTGGPSGPNTPNFVRAEVLPSGYLIRPCEGGGSMIHIVDHVDLDAWSVPEVLRPLYESPKILAQKMTIAALRHIRQIAHESSGEMPYGGGRQPAVLRTFSQRLSRGFNDAVNGFPDDGWSLMSSDGAEDVTIAFNSSPNKLVGSHVNSSQLFSAIGGGILCAKASMLLQNVPPALLVRFLREHRSEWADPGVDAYSAAALRASPYAVPGLRAGGFMGSQVILPLAHTLEHEEFLEVIRLEGHSLCHDEVVLSRDMYLLQLCSGVDENAAGACAQLVFAPIDESFADDAPLLPSGFRVIPLDGKTDAPSATRTLDLASTLEVGSGGTTRASSDTSSTCNTRSVLTIAFQFSYENHLRESVAAMARQYVRTVVASVQRVAMAIAPSRLGGQIETKNPPGSPEAHTLARWIGRSYRFHTGADLLRTDSQSTDSSLKAMWQHSDSIMCCSLKAAPVFTFANQAGLDMLETTLIALQDISLEKILDDDGRKALCTEFPKIMQQGFAYLPGGVCVSSMGRPVSYEQAVAWKVLSDDDTPHCLAFMFVNWSFV", - "output": "nucleus ; DNA binding ; DNA-binding transcription factor activity ; lipid binding" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MTIDRTYPIFTVRWLAVHGLAVPTVSFLGSISAMQFIQR", - "output": "chloroplast thylakoid membrane ; photosystem II reaction center ; electron transfer activity ; heme binding ; iron ion binding ; photosynthetic electron transport chain" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MKLLEEFIKEKGTVLPGNVLKVDAFLNHQIDPGLMQEMGKAFAERFQDLGITKIVTIESSGIAPAVFAGLALSVPVVFARKKKSVTLTDNLYTSTVYSYTKKESNDISVSKQFLTDADTILVIDDFLANGQAALGLLEIAELAGAKVAGIGIVIEKSFQQGRELLNKTGIPVYSLARIASLENEGILFLEEE", - "output": "cytoplasm ; xanthine phosphoribosyltransferase activity ; purine ribonucleoside salvage ; xanthine metabolic process ; XMP salvage" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MANYSTNDFKPGLKVMLDSNPCSIMENEYVKPGKGQAFNRVKLRNLKTGKVLEKTFKSGDTLEAADIVEVEMNYLYNDGEMWHFMDPESFEQIAADKTAMGDAAKWLKDDSNETCTIMLFNGVPLNVNAPNFVVLKVVETDPGVRGDTSGGGGKPAKLETGAVVRVPLFVQQEESVRVDTRTGEYLERA", - "output": "cytoplasm ; translation elongation factor activity" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MSKEPPKNSREKTKNLLLKLQDNICKGLENIDGKAKFTEESWLREEGGGGKSRVLKNGSIFEQAGVNFSEVHGKELPQSIISQRPEAKGHKWFATGTSMVLHPKNPFIPTVHLNYRYFEAGPVWWFGGGADLTPYYPYLTDVRNFHKEHCNACEKVNKNLHKVFKPWCDEYFFLKHRNESRGIGGIFYDYQDGSGRIYKGNNKESKAYKESINIGELNLNWNNLFSLAENCGGAFLDSYQPIIEKRVNQNYTKEQREFQLYRRGRYVEFNLVWDRGTIFGLQTNGRTESILMSLPPLARWEYGYKAKKGSREDYLTKIFTKPQDWQNDKILEKFCKENNIFD", - "output": "cytoplasm ; coproporphyrinogen oxidase activity ; metal ion binding ; protein homodimerization activity ; chlorophyll biosynthetic process ; protoporphyrinogen IX biosynthetic process" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MADKLTHLKQLEAESIHIIREVAAEFDNPVMLYSIGKDSAVMLHLARKAFFPGKLPFPVMHVDTQWKFQEMYRFRDKMVAEMGLELITHVNPDGVAQGINPFTHGSAKHTDIMKTEGLKQALDKYGFDAAFGGARRDEEKSRAKERVYSFRDSKHRWDPKNQRPELWNVYNGKVKKGESIRVFPLSNWTELDIWQYIYLEQIPIVPLYFAAEREVIEKNGTLIMIDDDRILEHLSAEEKARIQKKMVRFRTLGCYPLTGAVESTAATLPDIIQEMLLTRTSERQGRVIDHDGAGSMEEKKRQGYF", - "output": "ATP binding ; sulfate adenylyltransferase (ATP) activity ; hydrogen sulfide biosynthetic process ; sulfate assimilation ; sulfate reduction" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MNIQIVTVGKLKEKYLVQGIAEYLKRLSAYAKVTIVEVPDEKAPEVLSDAEMKQVKDKEGARILAKIPDDAHVIALAIDGKMKSSEEFAADLDKLATYGKSKVTFVIGGSLGLSEAVLKRSNERISFGRLTLPHQLMRLVLVEQVYRAFRIVRGEPYHK", - "output": "cytoplasm ; rRNA (pseudouridine-N3-)-methyltransferase activity" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MPSISININLAFATALLGMLMFRSHMMSSLLCLEGMMLSMFILSTLTILNMQFTMSFTMPILLLVFAACEAAIGLALLVMVSNNYGLDYIQNLNLLQC", - "output": "mitochondrial inner membrane ; respirasome ; NADH dehydrogenase (ubiquinone) activity ; ATP synthesis coupled electron transport" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MAHILGIDLGTTNSCMAVIEGGQPVVIPNAEGFRTTPSVVAFTKTGERLVGHAAKRQAITNPERTIISIKRDMGTNRRIKIDDKEYSPEEISAMILMKLKADAEAYLGEKITQAVITVPAYFTDSQRQATKNAGRIAGLEVLRIINEPTAAALAYGLDKEGHQKIMVYDLGGGTFDVSILEIGEGVIEVLATSGNNRLGGDDFDQRIIDYIADEFMKEHGIDLRKDKVALQRLKDAAERAKIELSSALQTTINLPFITADANGPKHIDMVLTRAKFEELIKDLVEKTREPVETALSDAKLTPEQIDKVILVGGSTRIPYVQEFVKKLTGKEPFKGINPDECVAIGAAIQAGVLGGQVKDILLLDVTPLSLGIETLGGVFTKIIERNTTIPTRKSQIFTTAADGQTQVEIHVLQGERPLAKDNKTLGRFILDGIPPAPRGVPQIEVTFDIDANGIVHVSAKDLGTGREQKITITSQTHLSEEEIQRAIKEAEMYAEQDRKRKELIETRNKADSIIYQTEKLLRDLGDKMTATEKEQIEAKLKALKDVMNGEDKERIERAIDELTKSFYDVSTRLYQQGYTQAGPQGGTNPGGQGGTDGNVNTDYKVY", - "output": "ATP binding ; ATP-dependent protein folding chaperone ; unfolded protein binding" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MLGIGAFKQRIPRPGEALPGREQALPLHNTHLINGHPLRGEFTGLAQVQFGLGCFWGAERKFWKVPGVYTTAAGYAGGQTPNATYSEVCSGQTGHTEAVLVVFDEQAVSFEHLLRTFWESHDPTQGMQQGNDVGTQYRSAIYCTTQAQYAAALASRDAYQQQLTAAGYGAITTEIGFPAPTFYYAEDDHQQYLAKHPNGYCGLGGTGVSCPIGLDA", - "output": "L-methionine:thioredoxin-disulfide S-oxidoreductase activity ; peptide-methionine (S)-S-oxide reductase activity ; protein modification process" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MSRLARLREQLSTRDHFCDGWLLVATLSLMLIGWVMVTSASTEVATSLTGNPWYFSVRHGVFVLCSMVVALLVLRIPMAWWKANGPLLLLVGLALLALVLVAGREVNGSRRWLSVPGIPLNLQASEIAKLCLIVYLAGYLERFLPQVRRHWGAFLRPLMVMAVMGVLLIFEPDYGAVVVMTGCVMGMLLMAGAPWGRFLLLMGLVAALGAALAIAEPYRMARLTSFVDPWADQFASGYQLTQALIAFGRGEWFGTGLGNSVQKLFYLPEAHTDFVFAVLAEELGMIGAVAVIGLFALLVWRAMAVGRRAELAKRPFAAYLCYGIALVIGAQAFINIAVSTGMLPTKGLTLPLLSYGGSSLVISAVMVGMLLRVDIETRQARRREQPAAPRTGEARS", - "output": "cell division site ; plasma membrane ; peptidoglycan glycosyltransferase activity ; cell wall organization ; FtsZ-dependent cytokinesis ; peptidoglycan biosynthetic process ; regulation of cell shape" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MSSRGHSTLPRTLMAPRMISEGDIGGIAQITSSLFLGRGSVASNRHLLQARGITCIVNATIEIPNFNWPQFEYVKVPLADMPHAPIGLYFDTVADKIHSVSRKHGATLVHCAAGVSRSATLCIAYLMKFHNVCLLEAYNWVKARRPVIRPNVGFWRQLIDYERQLFGKSTVKMVQTPYGIVPDVYEKESRHLMPYWGI", - "output": "MAP kinase tyrosine/serine/threonine phosphatase activity ; myosin phosphatase activity ; protein tyrosine phosphatase activity ; RNA binding ; protein dephosphorylation" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MADQLTDDQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYDEFVKVMMAK", - "output": "calcium ion binding" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MSMVYANIFLAFIMSLMGLLMYRSHLMSSLLCLEGMMLSLFVMMTVTILNNHFTLASMAPIILLVFAACEAALGLSLLVMVSNTYGTDYVQNLNLLQC", - "output": "mitochondrial inner membrane ; respirasome ; NADH dehydrogenase (ubiquinone) activity ; ATP synthesis coupled electron transport" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MDKIIKSISKNGHFRAFALDSTLTVKEAQERHQTWPTSTVALGRTLIAGQILGANEKGDTKITVKVLGDGAMGPIIAVADSRGHVKGYVKNRKLDYKKASTGEVLVAPFVGNGFLVVVKDMGLKQPYSGQVDLITGEIGEDLAWYFLSSEQTPSSVGVNVLLNEDSDTVKIAGGFMLQALPDATDEEITEIEHNIKSMPSIATMLTSEEPLKTMLDNIYGDMEYKNLGEFPLEFKCDCSKERFLEGIKSLGREPIEEMIAEDHGAEIICQFCENKYEYSEDELKALLK", - "output": "cytoplasm ; unfolded protein binding ; protein folding" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MNYTLTRILSNSKENRKSLQEDDSATLLIEQHVNSNIYLGKLKHILKSIVKWGRGNSLWPYNFGLSCCYVEMTTSFTAVHDVARFGSEVIRASPRQADFMVIAGTPFIKMAPVIKRLYDQMLEPKWVISMGSCANSGGMYDIYSVVQGVDKFLPVDVYIPGCPPRPEAYIQALLLLKEAIGKEQRPLSWIVGDQGIYRANMESERKRKHNERAKMTYLRSPEEI", - "output": "plasma membrane ; 4 iron, 4 sulfur cluster binding ; iron ion binding ; NADH dehydrogenase (ubiquinone) activity ; quinone binding" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MSKIHVRKKDTVVVISGKDKSKIGEVLSVLPKKGKVIVKDVNVVTKHQKPNRENMQGGIIHKEAPIFSSKVMLYCDKCKSATRISNKILEDGTKVRVCKKCGETF", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQIMSGEELGDIEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVAAVNLWFLESGKSGIFNLGTGRAESFQAVADATLAYHKKGSIEYIPFPDKLKGRYQAFTQADLTNLRNAGYDKPFKTVAEGVTEYMAWLNRDA", - "output": "ADP-glyceromanno-heptose 6-epimerase activity ; NADP binding ; ADP-L-glycero-beta-D-manno-heptose biosynthetic process ; carbohydrate metabolic process" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MSLLHCENSCGSSQSESDCCAAMAASSCGTAAKDDSVSGTASTVTLSSSFMEEIQGYDVEFDPPLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPDNFAKREILSLMVKCPNEGCLHKMELRHLEEHQAHCEFALMSCPQCQRPFQKCHLNIHILKECPRRQVPCENCAVSMAFEDKEIHEQNCPLANVICEYCNTMLIREQMPNHYDLDCPTAPVPCTFSAFGCHEKMQRNHLARHLQENTQSHMRMMAQAVQTLSLAVAPVPQCTMPLYDSVPPTRPSSGRHSEVHNFQETIQQLEGRLVRQDHQIRELTAKMETQSMYVNELKRTIRTLEDKVAEIEAQQCNGIYIWKIGNFGMHLKSQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQLPSAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTILDQSEAAVRQNHEEIMDAKPELLAFQRPTIPRNPKGFGYVTFMHLEALRQRTFIKDDTLLVRCEVSTRFDMGSLRREGFQPRSTDSGI", - "output": "CD40 receptor complex ; cell cortex ; cytosol ; extrinsic component of cytoplasmic side of plasma membrane ; lipid droplet ; nucleus ; perinuclear region of cytoplasm ; histone deacetylase binding ; identical protein binding ; protein kinase B binding ; tumor necrosis factor receptor binding ; tumor necrosis factor receptor superfamily binding ; ubiquitin conjugating enzyme binding ; ubiquitin protein ligase activity ; ubiquitin-protein transferase activity ; ubiquitin-ubiquitin ligase activity ; zinc ion binding ; activation of NF-kappaB-inducing kinase activity ; antigen processing and presentation of exogenous peptide antigen via MHC class II ; bone resorption ; DNA damage response ; I-kappaB kinase/NF-kappaB signaling ; in utero embryonic development ; interleukin-1-mediated signaling pathway ; interleukin-17-mediated signaling pathway ; interleukin-17A-mediated signaling pathway ; lipopolysaccharide-mediated signaling pathway ; myeloid dendritic cell differentiation ; negative regulation of transcription by RNA polymerase II ; neural tube closure ; odontogenesis of dentin-containing tooth ; ossification ; osteoclast differentiation ; positive regulation of I-kappaB kinase/NF-kappaB signaling ; positive regulation of interleukin-12 production ; positive regulation of interleukin-2 production ; positive regulation of interleukin-6 production ; positive regulation of JNK cascade ; positive regulation of JUN kinase activity ; positive regulation of leukocyte adhesion to vascular endothelial cell ; positive regulation of lipopolysaccharide-mediated signaling pathway ; positive regulation of NF-kappaB transcription factor activity ; positive regulation of NIK/NF-kappaB signaling ; positive regulation of osteoclast differentiation ; positive regulation of T cell cytokine production ; positive regulation of T cell proliferation ; positive regulation of transcription by RNA polymerase II ; positive regulation of transcription regulatory region DNA binding ; protein autoubiquitination ; protein K63-linked ubiquitination ; regulation of apoptotic process ; regulation of I-kappaB kinase/NF-kappaB signaling ; regulation of immunoglobulin production ; T cell receptor signaling pathway ; T-helper 1 type immune response ; tumor necrosis factor-mediated signaling pathway" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MWIEIPECYEVLRNVFSKFRRHSLTAAMVKLLMRADTHVSFTVPAEEPVAKCTFSQVLAALSVSLGSMVVGFSSAYTSPALVSMKDRNITSFEVTDQSGSWVGGIMPLAGLVGGILGGPLIEYLGRKNTILATATPFIISWLLIACATHVAMVLVGRALSGFSVGVASLSLPVYLGETVQPEVRGTLGLLPTAFGNIGILLCFVAGNYMDWSELAFLGATLPVPFLILMFLIPETPRWYVSRGRDDRARKALQWLRGKKADVDPELKGIIKSHQDAERHASQSAMLDLLKKTNLKPLLISLGLMFFQQLSGINAVIFYTVQIFQDAGSTIDENLCTIIVGVVNFIATFIATLLIDRLGRKMLLYISDIAMIITLMTLGGFFYVKNNGGDVSHIGWLPLASFVIFVLGFSLGFGPIPWLMMGEILPGKIRGSAASVATAFNWSCTFVVTKTFADIIASIGTHGAFWMFGSVCVVGLVFVIMYVPETQGKSLEDIERKMCGRVRRMSSVANIKPLSFNM", - "output": "plasma membrane ; sugar transmembrane transporter activity ; trehalose transmembrane transporter activity ; trehalose transport" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MARTVNCVYLNKEADGLDFQLYPGDLGKRIFDNVSKEAWGLWQKKQTMLINEKKLNMMNVDDRKFLEEQMTSFLFEGKDVEIEGFVPEKGQE", - "output": "iron ion binding" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MQSFAKITAQGTYVPEKVMDNNDFEKIVETSDEWIQQRTGIIERRIADENEYTSDLSYKAVLDLQEKYQVDLTDVDMIINTTLTPDYKTPSVASYVQAQLGLKNAGAIDINAACAGFTYGLNLANGLITSGQNKKILVIGSETLSKITDYNDRSTCILFGDGAGAFLVEYDKEEMSFIASNAGSDGLKGHNLYCTELSEEMFSDDLENHGYIVQNGRGVYKWAVGNVPNIIHEVLNQSNYSIEDLNWFVPHSANARMIESICEKANIETDKALKSLKYYGNTSSATIPLSIDLAIKEGKIKKDDLILLVGFGGGLAYASTLIRWTI", - "output": "cytoplasm ; 3-oxoacyl- synthase activity ; beta-ketoacyl-acyl-carrier-protein synthase III activity ; fatty acid biosynthetic process" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MEELLIENSQRFTIFPIQHPECWNWYKKLESMTWTAQEVDMCKDIDDWEAMPKPQREFYKQILAFFVVADEIVIENLLTNFMREIKVKEVLYFYTMQAAQECVHSEAYSIQVKTLIPDEKEQQRIFSGIEKHPIIKKMAQWVRQWMDPARNSLGERLVGFAAVEGILFQNHFVAIQFLKEQNIMPGLVSYNEFISRDEGMHCSFACFLISNYVYNIPEEKIIHKILKEAVELVDEFINYAFDKARGRVPGFSKEMLFQYIRYFTDNLCFMMQCKSIYNVGNPFPQMTKFFLNEVEKTNFFELRPTQYQNCVKDDAFAFKLFLDDDDF", - "output": "metal ion binding ; ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor ; deoxyribonucleotide biosynthetic process ; DNA replication" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MQKQRFCLDTTAITDSDVRKSLGVSNISESAEKIMDIIAQARVQLDISCHIPYNTVYKELIGFLVREECAPETLIKVNTWLVKKTPNRYEIKIPAEIFYEYIKDLRERINKGMRISENAMYETALEAYILSKPDEKDREDVLNEVLSKTVNSFRDKYRNTLRGGTLDSAPDLDVLLLAKELDAAVVANDEGIEKWAQRLGLRFVNARDFPFIIQEYLDLWDKK", - "output": "ribonuclease P activity ; tRNA 5'-leader removal" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "AICSLVLYLLTLMLMEKLSSNSVDAQEVELVWTILPAIVLILLALPSLQILYMMDEIDEPDLTLKAIGHQWYWTYEYTDFKDLSFDSYMIPTSELPLGHFRLLEVDHRVVVPMESPIRVIITAGDVLHSWAVPTLGVKTDAIPGRLNQTSFITTRPGIFYGQCSEICGANHSYMPIVVESTPLPHFENWSSLLSTSSSL", - "output": "mitochondrial inner membrane ; respiratory chain complex IV ; copper ion binding ; cytochrome-c oxidase activity" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MQDPEQFSIESILQRLKERFPTEADEISSFFDWDLVHKFTVFLKEKNEAGGFFSKRDSEEILDRHVLESIYHVYRITKKIGSWKGTQLGDAGTGPGIPGFFFRCLKEHPIVVLIDSQKRKLSHTENFVRSNQIDGVKFQFIRAEESKLSLNYVTSRGFIPYPYSIEAICNLLKINGTYVPFLGKHDMDTNLEKKVLSYSGFKLEFSEDLVPLEFLGMRHIKFLKKVSSPRHGYPRAWKEISKESKGANGKDRID", - "output": "cytoplasm ; rRNA (guanine-N7-)-methyltransferase activity" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MAQSIVEAPIRVDTSRKIIHVDMDAFYASIEEREHPAYKTQPLVIAHDPRQTGGRGVVTTANYVARQFGVHSAMPAAKALELCPTAVFKTPNFPLYREVSAQIHRIFHEYTEMIEPIAFDEAYLDVTTNKKHIHSAVELAHRLQQEIWHQTHLTCSTGISYNKFIAKLASDYRKPAGVTIVLPQDAEPFLLREPIEKFRGVGKKTVPKMHDLGIKTGQDLYAQSELDLIKQFGKLGYILYRRVRGSDDRPVEYLRERKSIGKERTFGPFLQSTTEVNTHLKAIAKLVAASMQSHQRHGKTLVLKLRYGDFVTITKRRTFGEFIPNDAALFEQYAEEIFEEVVDDHFNSGIRLLGITLTGLAPLAFENLTLPLYPNDN", - "output": "cytoplasm ; damaged DNA binding ; DNA-directed DNA polymerase activity ; magnesium ion binding ; DNA repair ; DNA-templated DNA replication ; SOS response" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MGVVVYAPASIGNVSVGFDVLGAAVSPVDGTLLGDRVQVKAGTEPFSLNTAGHFVSKLPTDPKENIVYDCWVVFARELDKKGIELKPLEMTLEKNMPIGSGLGSSACSIVAALDALNRFHDQPLNETELLALMGEMEGKISGGIHYDNVAPCYLGGVQLMLEELGIISQEVPCFDEWYWVMAYPGIKVSTAEAREILPSQYRRQDIIAHGRHLAGFIHACHSGQPELAAKMIKDVIAEPYREKLLPGFANARQYAASAGALATGISGSGPTLFSICKQKDVAERVARWLEQNYVQNEEGFVHVCRLDKQGSKVTGSEL", - "output": "cytoplasm ; ATP binding ; homoserine kinase activity ; phosphorylation ; threonine biosynthetic process" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MESPALSEFDLHLFAEGRHWHIYNVLGAHLVNHRGTEGTRFAVWAPNARAVSVIGDFNNWDSGRHAMAVNNGYGVWSLFIPGVKAGHLYKFAITTRNGHHITKTDPYGQAFEHRPSNAAVVTERGHYAWGDGDWLERRNRFDWQQSPISVYEVHPGSWRHHGSGRWLTYRELADQLVPYVLETGFTHIELLPVTEHPLDESWGYQTTGYYAPTSRFGSPDDLRYFVDQCHQNNIGVILDWVPGHFPDDDFALAEFDGTALYEHEDPRRGRHQDWGTLIYNYGRHEVRNFLIGSALFWLDTFHMDGLRVDAVASMLYLNYSRNEGEWLPNEHGGHENLDAIRFLQDLNRVCQSRFPGVLMMAEESTSWPRVTRPPEIGGLGFNLKWNMGWMHDTLHYLQQDPVYRQYHHDKLTFGLLYAFSENFVLPLSHDEVVHGKSSLIQKMPGDDWQQRASLRLLFSYMFSYPGAKLLFMGGEFGQRQEWSERRELDWYLLQYPEHQGLRKLVQDLNGLYRRYPALHRKSFTSEGFEWIDCHDSTQSVISFLRNPGTPEHGPLVIVANFTPIPRHHYRIGVPTGGNWQEIFNSDSTWYGGSNLGNPLLLQAEPTPWMARPCSVELTVPPLGLVMLRPAT", - "output": "1,4-alpha-glucan branching enzyme activity ; 1,4-alpha-glucan branching enzyme activity (using a glucosylated glycogenin as primer for glycogen synthesis) ; cation binding ; hydrolase activity, hydrolyzing O-glycosyl compounds ; glycogen biosynthetic process" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MGHKAGFVALVGRTNVGKSTLLNAILQEKIAITSPKPQTTRNTIRGILTTDEYQVIFVDTPGIHKPKSKLSEFMIEVAKRTLKEVDLILYMIEPDTEVGPGDRYIIEHLKEVDTPVILVVNKIDLVPEKRVEETIKIFKEQYEFKDVVAISAIENKNIDLLKEKIVSLLPEGPKYYLDDYITDQPEKLIVAEIIREKMLHFLEEEVPHGVYVEVESIKEREDKDIIDIEAYIYCEKESHKGIIIGKNGQMLKKIGQSARLDLEEFYGKQVFLDLWVKTRKGWRDNTTLLKKLGYAIDKKTYE", - "output": "cytoplasm ; plasma membrane ; GTP binding ; GTPase activity ; small ribosomal subunit rRNA binding ; ribosomal small subunit biogenesis" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MRLLIWVLFVTLVTFVSNTTATSTFTDPQVTSGDIEALTHLLDVESNADAKRFLRTESKNDLKSDADTNGIDIEDEERGFIPSSITNAFSKMKTGWSNFKSNQFEKAFQRMNQKGETPTTLAKRLDIGKTAEKRFEKTYEKYTAWWINHHTNAGT", - "output": "extracellular region ; host cell endomembrane system ; host cell plasma membrane ; membrane" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MAKKVVDQFKLQIPAGKANPSPPVGPALGQRGVNIMEFCKAFNEKTKDMMGFNIPVVITVYSDRSFTFVTKQPPATDLIKKAAGIQKGSDNPLKNKVGKITQAQLEEIAKTKMPDLNTTDLEAAKRIIAGSCRSMGVEIVD", - "output": "ribonucleoprotein complex ; ribosome ; large ribosomal subunit rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MPSNKSVSDAPITQFVNCRILKNHKLQWEDLWVREGKILNPEKLFFDEQGFADHRVDCENKIIAPGFIDVQLNGGYGIDFSQASSDIRGGVALVAKKILEHGVTSFCPTLVTSPPHIYHKVIPELRVQDGGPEGAGVLGIHLEGPFISEEKRGAHPPKFLRTFQSGGVADLMETYGQLENVAMVTLAPELTNSAAAIHELSSRGITVSVGHSMADLSQAEEAVQNGATFITHLFNAMLPFHHRDPGIVGLLTSDRIPPGRTVYYGMIADGIHTHPAALRIAHRAHPAGLVLVTDAVTAMGLPPGRHTLGQQQIDIQGLHAYVAGTTTLSGSIATMDMCVRHFREASGCTVEAALEAASLHPAQLLGISHRKGTLEFGADADFIVLDDMLTVRETYIAGQQVWRK", - "output": "metal ion binding ; N-acetylgalactosamine-6-phosphate deacetylase activity ; N-acetylglucosamine-6-phosphate deacetylase activity ; carbohydrate metabolic process ; N-acetylglucosamine catabolic process ; N-acetylneuraminate catabolic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MSKKLHLISLGCTKNLVDSEVMLGRLKSYEITPLIEKADVIIVNTCGFIEAAKQESLSVLFEALERRKKGAILVASGCLSERYHEELLREIPEIDIITGVGDYDKIDQMVRERQGFHSGEVFLASEEQERVITGSSVHAYVKLSEGCNQTCSFCAIPQFKGKLHSRTLESTLKEVKNLIAKGFTDFSFIAQDTSSYLRDRGEKEGLIQLIGALDSLEGIKSARILYLYPSTASAKLIQAIQKSQVVQNYFDMPLQHIAESMLKRMKRGANQKKHKELLERMRQVPHSFVRTTLILGHPGESEEEFEELCRFLEEFRFDRVNLFAYSDEEGTSAHKMEGKLDKRVINARLKRLDKIIQKQHRALLKEMVGQEIPVILEGGSSEHEFFYSARDARWAPEIDGEILINETLLPQPAPGHYWAKITQVAGKQLLATLTRRWEK", - "output": "cytoplasm ; 4 iron, 4 sulfur cluster binding ; metal ion binding ; protein methylthiotransferase activity ; peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid ; tRNA modification" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MAKIALPRKFFGRRFEVLEPPYLLSIPKNSFENFVQLKVNPYKRKNVGLEHIFRTSFPFKDPDENFILEYLGYEIGDWECNRCGYKPKDDLLGGWDVDCPQCGAKLVYKEKFTPEECKLKGLTYSAPLRVMLQLKAKTKNGYREFPPKKVYFGEIPLMTETGSFIINGTERIIINQLIRSSGVFFDEKEEKQKDATITRILYRGSIIPDKGSRVEFELSGATDLISARIDRKKLSATAVLRAFGLETAYDILKYFYEDVRKFIVKDKYLYDAQTGEEFTPEDLEHHYIFAIIKFRGKLVGFASSKERDFIEERYIEEWEDLVRLLDDDRIEVLSVTAVPRDVVIKSPYGKSLIDTLANDTSPKDVDKRSPVKVPAEYTLRDYGLMEMYKRLRHIEAITMEIDSVIERARIFFNVFFRDLKRYDLSRVGRVKINAKVHRIPKVLKPADVDLLDQLPPLALAEDYGEYKAGTRVTKDLLKELFKQYKEIKVKDYTEDEARFILPIDLVNILKYLIDLRHGRVKKDDIAHLGNRRVRSVGELLENQARLGIAKMEKVFRDRSAVINPEQPDLKPQDFINPRYVTTAITDFLKTGQLSQYLDNTNPLSELTHKRRLSALGPGGLTRESAKFEIRDVHPSHYGRICPIETPEGQNIGLVTSPTVYARVNEYGFLITPYRKVENGKVTDKIEWLAAYEEENYVIAQSTPTDEEGRLKAEFILARHKNDIRLVKPEQVEYIDVSPRQVISPSSSLIPFLEHDDANRALMGSNMQRQAVPLIFTQAPLIGTGMEKKIARDSHAVVVAKRGGVVEEVDSSKIIIRVNPEEINFDDPLDIGIDIYELRKFQRTNQKTCVNQRPIVRKGEKVEKGQIIADGHSTDRGELALGKDVLVAFMPWRGYNFEDAIVISERLVKEDVYTSIHIEELEVEARETKVGEEEITRQIPGVPERALAHLDEHGIVRVGTYVKPGDILVGKVTPKGETRLTPEEKLLQAIFGEKTRDVKDASLRCPPGVEGIVIDVQVFTRKGTGKKDMLAEKVEREELEALEQELEKKKNLIITGRDKVLKGLVLGRKVEKDAKVGRKTVKKGTVIDEKVFEEFVNYILGRPENFFEDEDLIRKIREIAERTRTQIEMLNKVYEEKKETLLKRRDLPPGVITLVKVFIANKRKIKVGDKMAGRHGNKGVISVVLPVEDMPFLPDGTPVDIVLNPLGVPSRMNVGQILETHLGWAAKELGKKIGEMIEKGRDRKAITEYLKEIFAIGDKDGENAKFIEEFLNSLSEEEFWSVVRDYAERGIPMATPAFEGAEEDAIKELLKKAGLPENGKTTLYDGRTGEPFDFEVTVGYMHMLKLIHMVDDKIHARATGPYSLVTQQPLGGRAQFGGQRLGEMEVWALEAHGAAYTLQEMLTVKSDDVEGRTKVYEAIVKGKYTYTPGIPESFKVLVRELKALGLNVKCLNGEEKPCDEVEVKEEEEK", - "output": "DNA-directed RNA polymerase complex ; DNA binding ; DNA-directed 5'-3' RNA polymerase activity ; ribonucleoside binding ; DNA-templated transcription" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MYAIIRTGGKQYKVQAGDVVQVDKLEQALGAEFEINEVLMVGGESTAVGQPLVKGAKVTVVVTKQAKTRKEIVFKKKRRQGYRKFATHKQEFTELFVKAISFDGKTAKSDEAATVVDVKAVRAEKAQARVAARKERAANKGPAEVVKKAAKKVAKKKVAKKAVKKTVKKATKTGAKKKAAKKTSKKA", - "output": "cytoplasm ; ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MARSKIALIGGGQIGGVLAQLAALRELGDVVLFDIVEGLPQGKTLDIAEAAPVDGFDVSLKGTNTYEDIKGADVVIVTAGLPRKPGMSRDDLIAVNSKIMTTVAEGIKQYAPNAFVIVISNPLDAMVTLCQRITGFPHNRVVGQAGVLDSARFAAFIAWELGVSVKDVTAVTLGGHGDDMVPLVRYTSVCGVPVMELLEQKYGAAKAAEVMAAMVKRTRGAGGEVVALLKTGSAFYSPASSAIAMAESFLKDQKRVLPTCAFLKGEFGVDGLYVGVPVVIGAGGAERVLQLKLNAEEQAMMDKSVKAVKDLVATLK", - "output": "L-malate dehydrogenase activity ; carboxylic acid metabolic process ; tricarboxylic acid cycle" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MHASTGKGSKIKYSRVLFKISGEALMGSRPFGHDMELIDQLCKDISDIYKLGVQVCIVVGGGNIFRGASASLSGCERASSDYIGMLATIINALILQNFLEKNSVNSKVLSAIPMVTICEPYIRRKAIHHLEKGRVVIFAAGTGNPFFTTDTAAALRAVETNCDAILKGTQVNGVYSADPKKNEDAVMYDRLSYMDLLTRDLKVVDASAISLARENSIPIIVFSLKEEKIVNIVKGHGTYTIVSDCE", - "output": "cytoplasm ; ATP binding ; UMP kinase activity ; 'de novo' CTP biosynthetic process ; phosphorylation" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MSASTQQEPSLILITGMSGAGRRATAAALEELGWYVADNLPPELIVRMVELSFSDDSPIEKLAIVTDVRSRDFAGNLTSVLHDLHTGGRRPTVLYLDATDEALIARFDAVRRTHPLQQKGTLQDGIDREREMLTSIRERADIVLDTTNRSIHDLRRELEKFFAAADHSSVRINVQSFGFKHGPPKDIDMLLDARFLPNPYWDPELRPFKGIDAPVSDFVLSQPGAQAFLDHIVGLIHSVLPGYRKEGKFFVSVAIGCTGGHHRSVAIVEELTRRLADDGVLVNLSHRDLER", - "output": "ATP binding ; GTP binding" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MAKKDGAIEVEGRVVEPLPNAMFRIELENGHKVLAHISGKMRQHYIRILPEDRVVVELSPYDLSRGRIVYRYK", - "output": "cytoplasm ; ribosome binding ; rRNA binding ; translation initiation factor activity" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MKPLKGCPVAKDVRVAIVGSCFNSPIADRLVAGAQETFFDFGGDPSSLTIVRVPGAFEIPCAIKKLLSTSGQFHAVVACGVLIQGETSHYEHIADSVAAGVSRLSLDFCLPITFSVITAPNMEAAWERAGIKGPNLGASGMKTALEMASLFSLIGKE", - "output": "cytosol ; riboflavin synthase complex ; 6,7-dimethyl-8-ribityllumazine synthase activity ; riboflavin biosynthetic process" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MRIEEDLKLGFKDVLIRPKRSTLKSRSDVELERQFTFKHSGQSWSGVPIIAANMDTVGTFSMASALASFDILTAVHKHYSVEEWQAFINNSSADVLKHVMVSTGTSDADFEKTKQILDLNPALNFVCIDVANGYSEHFVQFVAKAREAWPTKTICAGNVVTGEMCEELILSGADIVKVGIGPGSVCTTRVKTGVGYPQLSAVIECADAAHGLGGMIVSDGGCTTPGDVAKAFGGGADFVMLGGMLAGHEESGGRIVEENGEKFMLFYGMSSESAMKRHVGGVAEYRAAEGKTVKLPLRGPVENTARDILGGLRSACTYVGASRLKELTKRTTFIRVQEQENRIFNNL", - "output": "GMP reductase complex ; GMP reductase activity ; metal ion binding ; purine nucleotide metabolic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MKLLSLHVQDFRNLAAVELAPSPRATVLLGENGQGKTNLLEAIYFLTTLKPLRAVRLAELVRFGAEQGAVAGDFEGPGGVRRVAVQVAAGGRTATLDGKALGSGARLDDYFEGLASVCFSPDDLLLVKAGPDGRRRFLDRAAFNRWPAVLGEAREYVRALRARNAALRAGPAEVEASFREPLVRAGARILVRRRDLVAELAPRLQAAFAEISGPAAPEAHLAYRAAGGVDVEHPEAEVAARLAHALEARLERDREKGFTSAGPHMDDLVLALGGKGARLYGSQGQQRALVLALKIAEIENLRAALGRPPLLLLDDVSSELDPAKNRFLLGYLAALPAQAFLTSTDRRLIEPAAGPDTAFFEVRSGVVSPLVS", - "output": "cytoplasm ; ATP binding ; single-stranded DNA binding ; DNA repair ; DNA replication ; SOS response" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MGSSPQSSTRTLLGLLFLLLVQLSSALKFDLHASSGHNERCIRNFVFKDQLVVVTAIVSGQRGDGQVVNMHIKDALGNDHGRPKDIAGETRQAFTSVADTAFDVCFENKLVSHHGVANPYKSVELDVEIGADARDWSSVQAAEKLKPVETDLRRIEEMVAEIVNEMEYLRAREQKLRDTNESTNERVKWFAFGTMGMLVGLGVWQVVYLRAYFRYVDFPVSWRVDGVVANCCSCCEQVEASYLRSSRVVFWSPLVMWTRLSWLILR", - "output": "COPII-coated ER to Golgi transport vesicle ; endoplasmic reticulum ; endoplasmic reticulum membrane ; endoplasmic reticulum-Golgi intermediate compartment ; Golgi apparatus ; Golgi membrane ; endoplasmic reticulum to Golgi vesicle-mediated transport ; Golgi organization ; intracellular protein transport" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "EEDRKCPKILMRCKRDSDCLAKCTCQESGYCG", - "output": "extracellular region ; serine-type endopeptidase inhibitor activity ; negative regulation of peptidase activity" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MTINPVSRKVAWLRVVTLAIAAFIFNTTEFVPVGLLSDIAESFHMQTAQVGIMLTIYAWVVAVMSLPFMLLTSQMERRKLLICLFVLFIASHVLSFLAWNFTVLVISRIGIAFAHAIFWSITASLAIRLAPAGKRAQALSLIATGTALAMVLGLPIGRVVGQYFGWRTTFFAIGMGALITLLCLIKLLPKLPSEHSGSLKSLPLLFRRPALMSLYVLTVVVVTAHYTAYSYIEPFVQNVAGLSANFATVLLLILGGAGIIGSLVFGKLGNRHASSLVSIAIALLVVCLLLLLPAADSEAHLAILSIFWGIAIMVIGLGMQVKVLALAPDATDVAMALFSGIFNIGIGAGALVGNQVSLHWSMSAIGYIGDIPACAALVWAVLIFRKWPVTLEEQPH", - "output": "plasma membrane ; carbohydrate transmembrane transporter activity" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLTLMREMTHAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPARWHPEIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVASWKEQRCPKPD", - "output": "ATP binding ; CCA tRNA nucleotidyltransferase activity ; cyclic-nucleotide phosphodiesterase activity ; magnesium ion binding ; phosphatase activity ; tRNA binding ; RNA repair ; tRNA 3'-terminal CCA addition" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MSNIPAELKYSKEHEWLRKEADGTYTVGITEHAQELLGDMVFVDLPEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYAGGWIFKIKASDESELESLLDATAYEALLEDE", - "output": "glycine cleavage complex ; glycine decarboxylation via glycine cleavage system" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MQTSFDVIVIGGGHAGCEAAAAAARLGATTALVTHRFATVGAMSCNPAIGGLGKGHLVREVDALDGLMGRVADQGGIQFRMLNRRKGPAVRGPRAQADRKLYAAAMQALILATPHLSVVEAEADDLLTSDGRITGIRLADGRELGAGAVVITTGTFLRGLIHLGERSWPAGRIDEAPALGLSKSFERLGFALGRLKTGTPPRLDGRSIDWGAVEMQPGDEPPEPFSVLTEKITNPQIECGITRTTPATHAVIRANVHRSPMYSGQIQSSGPRYCPSIEDKIVRFGDRDGHQIFLEPEGLDDPTVYPNGISTSLPEEVQRAILATIPGLQRTTMLRPGYAIEYDHVDPRELEPTLQAKRLRGLFLAGQINGTTGYEEAAAQGLVAGLNAALLASGGGEIAFDRADGYLGVMIDDLVTRGITEPYRMFTSRAEYRLTLRADNADQRLTGQGIALGCVGAERTEFHTAKMAALAQAKALAQSLAITPSQAAKHGLSLNRDGVRRSAFELLAYPEVDWARVEAIWPELAAIEPSIATHLEIDATYDVYLKRQTADVEGFRRDEGLLLTEIDYALVPGLSNEARGRLEKARPRTVGQAGRLDGLTPAALGILAAYLRRDQRRKPAGSAAG", - "output": "cytoplasm ; flavin adenine dinucleotide binding ; tRNA wobble uridine modification" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MAINIIAQLEQEESARLLAARAIPDFRPGDTLRVNVKIKEGERERVQAYEGVCIARAGTGVHESFTVRKISFGEGVERLFPLLSPSIESIEVKRRGVVRRAKLYYLRDRRGKSARIAERAGGPKASASTEA", - "output": "ribonucleoprotein complex ; ribosome ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MKFDLTTAYTLSIPLLASSGTVLATTADTSSKSSTMTAIHTSTGYNNHSDSLWATFNNNVALTWDAPNNEFYLPVITWHNRYTYDKEKTDKYNERPWGFGYGKYRYDKDNDWHSLYAMAFMDSHNRLEPIIGYGFQKMWIPGDLDGFRLGVGFTLSVTARHDYYYVPIPLPLPLFSVEYDQLSFQGTYIPGTYNNGNVFFAWLRWQW", - "output": "cell outer membrane ; acyltransferase activity ; lipid A biosynthetic process" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MALPRLRVNASNEERLVHPNHMVYRKMEMLVNQMLDAEAGVPIKTVKSFLSKVPSVFTGQDLIGWIMKNLEMTDLSDALHLAHLIASHGYLFQIDDHVLTVKNDGTFYRFQTPYFWPSNCWDPENTDYAVYLCKRTMQNKAHLELEDFEAENLAKLQKMFSRKWEFVFMQAEAQYKVDKKRDRQERQILDSQERAFWDVHRPVPGCVNTTEVDFRKLSRSGRPKYSSGGHAALAASTSGIGCTQYSQSVAAAHASLPSTSNGSATSPRKNDQEPSTSSGGESPSTSSAAAGTATTSAPSTSTPPVTTITATINAGSFRNNYYTRPGLRRCTQVQDTLKLEIVQLNSRLSKNVLRTSKVVENYLAYYEQRRVFDPLLTPPGSQADPFQSQPNPWINDTVDFWQHDKITGDIQTRRLKLWEDSFEELLADSLGRETLQKFLDKEYSGENLRFWWEVQKLRKCSSRMVPVMVTEIYNEFIDTNAATSPVNVDCKVMEVTEDNLKNPNRWSFDEAADHIYCLMKNDSYQRFLRSEIYKDLVLQSRKKVSLNCSFSIFAS", - "output": "cytoplasm ; dendrite ; neuron projection ; GTPase activator activity ; dopamine receptor signaling pathway ; feeding behavior ; G protein-coupled receptor signaling pathway ; intracellular signal transduction ; negative regulation of signal transduction ; positive regulation of GTPase activity ; positive regulation of locomotion ; regulation of G protein-coupled receptor signaling pathway ; regulation of oviposition ; rhythmic behavior" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MALSPKRVKYRKVQRGRVKGDATRCNAVDFGAYALVCLEPFWLTSRQIEAARVALNRRIKRGGKLWIRVFPDKPYSKKPAETRMGKGKGSPEYWVAVVKPGTVLFELMGVERALAEQAMLLAGSKLPIKTRFAERVQEI", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; tRNA binding ; translation" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MVWRRRWWRRRRRPVWRRRYRRWRRRRRWRRRPRRRRRPYRRRPYRRYGRRRKVRRRRRRTLVVRQFQPPYQRRCRVSGLEPLLYFGKKEEERHFYGNRQIMKDVDQTEGGGVTDGVFSLEELYESYQEGWNHWSASNQMLPLVRYFGCKITLYRSATDSYIFWWTNRPPFQVDRQFWVGMHPYWMLRRGRKVVMLSKQLKPFAKDHVTIKIGPPALMKTKWYFARDFCKTWLLQWRACFFNPIDPYIPRGANNTTVTFYGFPGHSYPSQSLYYTWQEHLAETNVWGITNESEKTKFEALRKAWNEQATKGPVAGYKAVLQAMNAWASVAAPGPEGSNFAKGTNVALGLANLLWLIYSQYYWQNRSPSPWGLPGATLEAMKHPEAWKPYAYKYSWSHDKGKGNRFAICDWPYKDQHGEQTTPLNFDLEIKDAPLWWCVTAAYDWAIRQGKNPANWSFFVRSDYTWPRADNIILAYSSYFADNVVKNKYADPQHATGGYFTLYRAPNLIDGREAIDIIYRNGPFAPKQEESTGNATIKYRFYFKWGGTQRPPRPQPTDPCQQPRWEGPNFPPFDGRARIDNPSDQDPRSYFWPFDTRRGSLTASAVDRVKRSLDAVTEPSETRLREGEETYGLPPPEKRARWGFPSILPTENPTDEDERYLEAEADTSSSDATDGVPETPFELLQHIQRDRDKRRELRGRLARLILRLRRRQDPELQNYYP", - "output": "T=1 icosahedral viral capsid" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MALHTVLIMLSLLPMLEAQNPEHANITIGEPITNETLGWLSDKWFFMGAAFRKLEYRQAIQMMQTEFFYLTTNLINDTIELRESQTIGDQCVYNSTHLGFQRENGTFSKYEGGVETFAHLIVLRKHGAFMLAFDLNDEKKRGLSLYAKRPDMTLELREVFQKAVKHVGMDESEIIFVDWKKDKCGQQEKKQLELGKETKKDPEEGQA", - "output": "extracellular space ; acute-phase response ; regulation of immune system process" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MSASDLHPVQAGAPQGRRQILVTSALPYANGQIHIGHLVEYIQTDIWARTMRMHGHEIYYIGADDTHGTPVMLRAEQEGVSPKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSEKIYLALKEAGFIAEREIEQAYDPVKQMFLPDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLVNPYSVVSGATPVRKTSTHHFFRLSDPRCEAFLREWVSGLAQPEATNKMREWLGDAGEAKLADWDISRDAPYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCERRGLDFDAWISKDSTTEQYHFIGKDILYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDAGLNPEWLRYYFAAKLNATMEDIDLNLEDFQARVNSDLVGKYVNIASRAAGFLIKRFDGRVQASATNHPLLVTLRDAIPQIAAHYEAREYGRALRQTMELADAVNGYVDTAKPWELAKDPANAVALHETCTVSLEAFRLLSLALKPVLPRVAEGVEAFLGIAPLTWADANKPLSSEQPIRAYQHLMTRVDPKQIDALLAANRSSLQGAAAADAAGATNGNGAKAAKSAKAANAASADDEASPFISIDDFAKIDLRIAKIVACQAVEGSDKLLQLTLDVGEEKTRNVFSGIKSAYQPEQLVGKLTVMVANLAPRKMKFGLSEGMVLAASAADEKAEPGLYILEPHSGAKPGMRVK", - "output": "cytoplasm ; ATP binding ; metal ion binding ; methionine-tRNA ligase activity ; tRNA binding ; methionyl-tRNA aminoacylation" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MTNIRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNVGVILLFTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGISSDTDKIPFHPYYTIKDILGALLLILVLMLLVLFTPDLLGDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILVLVPALHTSKQRSMMFRPISQCIFWILVADLLTLTWIGGQPVEHPYIIIGQLASITYFLLILVLMPVASTIENNLLKW", - "output": "mitochondrial inner membrane ; respiratory chain complex III ; metal ion binding ; ubiquinol-cytochrome-c reductase activity ; respiratory electron transport chain" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MKLLALAVLLLAVCSLEGAFVRRQAEEPNLQSLVAQYFQTMTDYGKDLLEKAKGPELQAQAKAYFEKTQEQLTPLVKKAGTDLINFLSNFMDLRTQPATQ", - "output": "high-density lipoprotein particle ; lipid binding ; lipid transport ; lipoprotein metabolic process ; positive regulation of phagocytosis ; protein stabilization" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MSSPSPPAPVACAAISASEKVDGFTRKSVRKAQRQKRSQGSSQFRSQGSQAELHPLPQLKDATSNEQQELFCQKLQQCCVLFDFMDSVSDLKSKEIKRATLNELVEYVSTNRGVIVESAYSDIVKMISANIFRTLPPSDNPDFDPEEDEPTLEASWPHIQLVYEFFLRFLESPDFQPSIAKRYIDQKFVQQLLELFDSEDPRERDFLKTVLHRIYGKFLGLRAFIRKQINNIFLRFIYETEHFNGVAELLEILGSIINGFALPLKAEHKQFLMKVLIPMHTAKGLALFHAQLAYCVVQFLEKDTTLTEPVIRGLLKFWPKTCSQKEVMFLGEIEEILDVIEPTQFKKIEEPLFKQISKCVSSSHFQVAERALYFWNNEYILSLIEENIDKILPIMFASLYKISKEHWNQTIVALVYNVLKTLMEMNGKLFDDLTSSYKAERQREKKKELEREELWKKLEELQLKKALEKQNNAYNMHSIRSSTSAK", - "output": "centrosome ; chromosome, centromeric region ; cytoplasm ; cytosol ; M band ; membrane ; nucleus ; plasma membrane ; protein phosphatase type 2A complex ; Z disc ; kinase binding ; phosphoprotein phosphatase activity ; protein phosphatase activator activity ; negative regulation of lipid kinase activity ; negative regulation of protein localization to plasma membrane ; positive regulation of protein dephosphorylation ; protein dephosphorylation ; signal transduction" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MPKVRTKDLIEQFQLELISGEEGIHRPIDTSDLSRPGIEMAGFFTYYPADRVQLLGKTELTFFDTLTSDQKQERMKALCTEETPCIIVTRNQDVPDELLQASRESGMPLLRSSQTTTRLSSRLTNYLEGKLAPTTAVHGVLVDIYGVGVLITGQSGVGKSETALELVKRGHRLVADDSVEIRQEDEDMLVGSSPDLIEHLLEIRGLGIINVMTLFGAGAVRNYKRITLVINLEIWDQKKNYDRLGLDEEKMKIIDTELTKITLPVRPGRNLAVIIEVAAMNFRLKRMGVNAAQQFSERLMSAIELGNQE", - "output": "ATP binding ; magnesium ion binding ; phosphorelay sensor kinase activity ; protein serine/threonine kinase activity ; protein serine/threonine/tyrosine kinase activity ; carbohydrate metabolic process ; regulation of carbohydrate metabolic process" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MLNINNKIAKGGYVYSKNIRLAKSKIDKQKCYDVREACSIIKEISFAKFNETVDIAIKLGVNPSHSSQVVRGVAAMPSGTGKTVKVAVICQEEKLDEFKTTGADIVGSLDIIEAIKSGNIDYDVYITTPAMMVAVSQVARILGPKGLMPNPKLGTVTNDVAAVVKKVKSGQVEFKVDKAGNIHAGIGKISFSIDEIEANINALVSAIIKSKPSEAKGTYLNGIYLSTTMGPSVRLEISNFTESGNERR", - "output": "large ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; tRNA binding ; regulation of translation ; translation" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MVMTDPIADFLTRIRNANMVKHDKLELPASKIKKEIAEILKREGFIRDVEYIEDDNAGTIRVFLKYGATGERVITGLKRISKPGLRVYAKSTEVPKVLNGLGIAIVSTSQGVLTDKEARAKQVGGEVLAYVW", - "output": "cytosolic small ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MFLIITRDTMFFTAMKNILSKGNVVHIQNEEEIDVMLHQNAFVIIDTLMNNVFHSNFLTQIERLKPVHVIIFSPFNIKRCLGKVPVTFVPRTITIIDFVALINGSYCSVPEANVSLSRKQHQVLSCIANQMTTEDILEKLKISLKTFYCHKHNIMMILNLKRINELVRHQHIDYLV", - "output": "DNA binding ; regulation of DNA-templated transcription" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MKVKRYINITKPGIIMGNLISVAGGFLLASRGEVDGLLMLMTVLGLSLVVASGCVLNNCIDTDIDAKMQRTRNRATVTGDVSIARALQFGLALAVLGFGLLIRYTNSIAVGFAVLGYAVYVGVYSLYMKRKSVYGTLVGSLSGAVPPVVGYCAASGQFDAGAAILLLMFSLWQMPHSYAIAIFRFDDYAKANIPVLPVAKGIAKTKLHIVLYIAVFAIVSALLPLSGYTGLTFMAVACVTSLWWLFMALRGYRKNIELVVWARQVFGFSILTITALSIGMAFDFQALPPSLLVMLS", - "output": "plasma membrane ; protoheme IX farnesyltransferase activity ; heme O biosynthetic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "VMNLWPGVRLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRNKYAMLARLAVEAGF", - "output": "extracellular space ; plasma membrane ; metal ion binding ; peptidase activity ; cell-cell signaling ; proteolysis" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MSKKIKVGIVGATGYTGVELLRLLAAHPDVEVAAVTSRSEAGTAVADYFPSLRGVYGLAFQTPDEAGLEQCDIVFFATPNGIAMKDAPRLIEQGVRVIDLSADFRIRDIPTWEHWYGMTHAAPDLVSQAVYGLSELNREAVAQARLVANPGCYPTCVSLPLVPLLRQCRLKPGMPLIADCKSGVSGAGRKGNVGSLLCEAGDNFKAYGIAGHRHLPEIRQTIAGLQDGIAEGFVFTPHLAPMIRGMHATVYLHLSDGSDPETVLRDYYRDSPFVDILPTGSAPETRSVRGANLCRISIQQAAQSDVWVVLSVIDNLVKGAAGQAVQNMNIMFGLEETHGLDAIPLLP", - "output": "cytoplasm ; N-acetyl-gamma-glutamyl-phosphate reductase activity ; NAD binding ; NADP+ binding ; protein dimerization activity ; arginine biosynthetic process" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MSYKKLYQLTAIFSLPLTILLVSLSSLRIVGEGNSYVDVFLSFIIFLGFIELIHGIRKILVWSGWKNGS", - "output": "plasma membrane ; bacteriocin immunity" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MPKVIFLPNEDFCPEGMVVDAATGDNLLEVAHNAGVEIHHACDGSCACTTCHVIVREGFDSLNETSDQEEDMLDKAWGLEMDSRLSCQCVVGNEDLVVEIPKYNLNHANEAAH", - "output": "cytosol ; 2 iron, 2 sulfur cluster binding ; electron transfer activity ; metal ion binding ; P450-containing electron transport chain" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MLDIQFIREHTDIVKESQRKRGESVELVDEVLSSDTARREALKAFEEARAQQKEIGKKVASVPADEKAKLIAETKELSQTVAEYKAKADSAAEEYTTAMWRLSNIVEPEAPEGGEDDYVVVKKVGQIRDFAAEGFEPKDHLTLGAGVAGIDMRRGVKVGGSRFYFLRGQVARMQIAMLTMAVDQAEEHGFTLAITPTLVRPEVMRGTGFLNSHADEIYRLREPDDQYLVGTSEVALAGMHENEILDLGNGPLRYCGWSSCYRREAGAAGKDTSGIIRVHQFDKVEMFVYAKQEDSYKEHEHLLAMEQEMLAKVEVPYRIIDTAAGDLGSSAARKFDCEAWVPTQGRYRELTSTSNCTEYQARRLNIRERMEDGGTRPVSTLNGTLATTRWLVAIMENHQQKDGSIEIPKAMRAYMGGKEVIEPTKWEA", - "output": "cytoplasm ; ATP binding ; serine-tRNA ligase activity ; selenocysteine biosynthetic process ; seryl-tRNA aminoacylation" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MKTWKDVIGNEKTQPYFQHILAQVHQARASGKVVYPPQADIFNAFKLTEFDQVKVVLLGQDPYHGPNQAHGLAFSVKPPVAPPPSLMNMYKELSNEYPDFHMPNHGSLEQWAQQGVLLLNTVLTVERGQAHSHADFGWETFTDHVIHALNEQREHLVFLLWGSHAQKKGQFIDRSKHCVLTAPHPSPLSAHRGFFGCGHFTQTNDYLRRHHISEINWQLDNI", - "output": "cytoplasm ; uracil DNA N-glycosylase activity ; base-excision repair" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MGINFDVSRPKARSSINMITKFHTIGLIGKPHHQGTNQTLKRLHHWLTMQGFEVLVEERVAAELGPNIEAVDLLEIGARCDLAIVVGGDGNMLGAARVLARFDLGVIGVNRGNLGFLTDLPPDAFEEALAKVLDGEFDTEHRFLLEAEVYRHGMLKASNTAVNEAVLHPGKIAHMIEFEVYIDDQFMYSQRADGMIVSTPTGSTAYALSAGGAILTPNLQALILVPMFPHTLSCRPIVVDACSTIKMVVSPDNGENLEVSCDGHVHLAVLPGDEIIVRRSSERLRLIHPKGHNYFHVLRTKLGWGSKLF", - "output": "cytoplasm ; ATP binding ; metal ion binding ; NAD binding ; NAD+ kinase activity ; NAD metabolic process ; NADP biosynthetic process ; phosphorylation" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "METLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN", - "output": "chloroplast thylakoid membrane ; photosystem II ; chlorophyll binding ; electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity ; metal ion binding ; photosynthetic electron transport in photosystem II" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MEFLERTYLVNDKAAKMYAFTLESVELQQKPVNKDQCPRERPEELESGGMYHCHSGSKPTEKGANEYAYAKWKLCSASAICFIFMIAEVVGGHIAGSLAVVTDAAHLLIDLTSFLLSLFSLWLSSKPPSKRLTFGWHRAEILGALLSILCIWVVTGVLVYLACERLLYPDYQIQATVMIIVSSCAVAANIVLTVVLHQRCLGHNHKEVQANASVRAAFVHALGDLFQSISVLISALIIYFKPEYKIADPICTFIFSILVLASTITILKDFSILLMEGVPKSLNYSGVKELILAVDGVLSVHSLHIWSLTMNQVILSAHVATAASRDSQVVRREIAKALSKSFTMHSLTIQMESPVDQDPDCLFCEDPCD", - "output": "cytoplasmic vesicle ; Golgi membrane ; plasma membrane ; secretory granule ; secretory granule membrane ; transport vesicle membrane ; protein homodimerization activity ; zinc ion binding ; zinc ion transmembrane transporter activity ; zinc:proton antiporter activity ; insulin processing ; insulin secretion ; intracellular zinc ion homeostasis ; positive regulation of insulin secretion ; regulation of sequestering of zinc ion ; regulation of vesicle-mediated transport ; response to glucose ; response to interleukin-1 ; response to type II interferon ; response to zinc ion ; sequestering of zinc ion ; zinc ion import into organelle ; zinc ion transmembrane transport ; zinc ion transport" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MRHVPRKRFGQNFLRDPGVIQEIVAAVGPAPSDRLVEIGPGEGVLTRELLQSGACLEAIELDRDLVAALKRRFAGVGRLRIHEGDAMKFDLRTIATGERLRVVGNLPYNISTPLLFHLFDQIDVIEDMHFMLQKEVVDRLCAGAGDDHYGRLSVMAALYCQAQHLFDVGPECFHPQPKVVSAVVRLVPHAVPPDAGMVKQVSAVVVAAFGQRRKTLRNALKGLLDETAMVRAGIDPGARAEELSLADYVGLSRQLNP", - "output": "cytoplasm ; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity ; RNA binding" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MTSSSSDRSPLASQLGEVPAPLYARVKQMIVSQIQSGAWPPHHRVPSESELVSQLGFSRMTINRALRELTSDGLLVRMQGVGTFVAEPKGQSALFEVHNIADEIAARGHRHRCQVITLGEEVAGPERALALDVREGQRVFHSLIVHYENDIPVQIEDRYVNAAVAPDYLKQDFTRQTPYAYLTQVAPLTEGEHVVEAILAEPAECKLLQIERGEPCLLIRRRTWSGRVAVTAARLLHPGSRHRLEGRFSS", - "output": "DNA binding ; DNA-binding transcription factor activity ; histidine catabolic process to glutamate and formamide ; histidine catabolic process to glutamate and formate ; negative regulation of DNA-templated transcription" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MTTHLVWFRQDLRLHDNLALAAACRNSSARVLALYIATPRQWATHNMSPRQAELINAQLNGLQIALAEKGIPLLFREVDDFVASVEIVKQVCAENSVTHLFYNYQYEVNERARDVEVERALRNVVCEGFDDSVILPPGAVMTGNHEMYKVFTPFKNAWLKRLREGMPECVAAPKVRSSGSIEPSPSITLNYPRQSFDTAHFPVEEKAAIAQLRQFCQNGAGEYEQQRDFPAVEGTSRLSASLATGGLSPRQCLHRLLAEQPQALDGGAGSVWLNELIWREFYRHLITYHPSLCKHRPFIAWTDRVQWQSNPAHLQAWQEGKTGYPIVDAAMRQLNSTGWMHNRLRMITASFLVKDLLIDWREGERYFMSQLIDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGEKFDHEGEFIRQWLPELRDVPGKVVHEPWKWAQKAGVTLDYPQPIVEHKEARVQTLAAYEAARKGK", - "output": "damaged DNA binding ; deoxyribodipyrimidine photo-lyase activity ; DNA binding ; FAD binding ; photoreactive repair ; phototransduction, visible light ; response to light stimulus" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MPLSYQHFRKLLLLDDEAGPLEEELPRLADEGLNRRVAEDLNLGNLNVSIPWTHKVGNFTGLYSSTVPVFNPEWQTPSFPNIHLQEDIINRCQQYVGPLTVNEKRRLKLIMPARFYPNLTKYLPLDKGIKPYYPEHAVNHYFKTRHYLHTLWKAGILYKRETTRSASFCGSPYSWEQELQHGRLVFQTSTRHGDESFCSQSSGILSRSPVGPCIRSQLKQSRLGLQPQQGSLARGKSGRSGSIWARVHSTTRRSFGVEPSGSGHIDNSASSASSCLYQSAVRKTAYSHLSTSKRQSSSGHAVELHNIPPSCARSQSEGPISSCWWLQFRNSEPCSDYCLTHIVNLLEDWGPCTEHGEHNIRIPRTPARVTGGVFLVDKNPHNTTESRLVVDFSQFSRGSTHVSWPKFAVPNLQSLTNLLSSNLSWLSLDVSAAFYHIPLHPAAMPHLLVGSSGLPRYVARLSSTSRNINYQHGTMQDLHDSCSRNLYVSLLLLYKTFGRKLHLYSHPIILGFRKIPMGVGLSPFLLAQFTSAICSVVRRAFPHCLAFSYMDDVVLGAKSVQHLESLFTSITNFLLSLGIHLNPHKTKRWGYSLNFMGYVIGSWGTLPQEHIVLKIKQCFRKLPVNRPIDWKVCQRIVGLLGFAAPFTQCGYPALMPLYACIQSKQAFTFSPTYKAFLCKQYLHLYPVARQRSGLCQVFADATPTGWGLAIGQSGMRGTFVAPLPIHTAELLAACFARSRSGAKLIGTDNSVVLSRKYTSFPWLLGCAANWILRGTSFVYVPSALNPADDPSRGRLGLYRPLLHLPFRPTTGRASLYAVSPSVPSHLPVRVHFASPLHVAWRPP", - "output": "DNA binding ; DNA-directed DNA polymerase activity ; metal ion binding ; RNA-directed DNA polymerase activity ; RNA-DNA hybrid ribonuclease activity ; DNA replication ; suppression by virus of host innate immune response" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MINHLALNTPYFGILLSVIPFFLATILFEKTNRFFLFAPLFVSMVFGVAFLYLTGIPYKTYKIGGDIIYFFLEPATICFAIPLYKKREVLVKHWHRIIGGIGIGTVVALLIILTFAKLAQFANDVILSMLPQAATTAIALPVSAGIGGIKELTSLAVILNGVIIYALGNKFLKLFRITNPIARGLALGTSGHTLGVAPAKELGPVEESMASIALVLVGVVVVAVVPVFVAIFF", - "output": "plasma membrane ; cytolysis ; killing of cells of another organism ; programmed cell death" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MMNHTPLLLGIRERLIFALDVPSRTQALEWIDQLGDAISFYKIGMELLASGEYFQVLDDLASRGKRVFVDLKFFDIPATVAGVIRRLSQWPISYCTIHGWHAPMMQAATEANTSNMHLLAVTVLTSMTREDLAKMGINREPVDVVVERALAAHMAGMSGVIASGQEAAAIRHAIGSGFSIVCPGIRTNHVPHNDQQRTIGIKAAFANGADAIVVGRPIRMAQDPQAAAEAMQTEIMTALTEPST", - "output": "orotidine-5'-phosphate decarboxylase activity ; 'de novo' pyrimidine nucleobase biosynthetic process ; 'de novo' UMP biosynthetic process" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MPNIKSAIKRVRTTENAEARNISQKNAMRTAVKNAKTAINNNADNKAELVNFAIKSVDKASQSNLIHSNKADRIKSQLMSSSK", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MESLNALLQGMGLMHLGAGQAIMLLVSLLLLWLAIAKKFEPLLLLPIGFGGLLSNIPEAGLALTALESLLAHHDAGQLAVIAAKLHCAPDVHAIKEALALALPSVQNQMENLAVDMGYTPGVLALFYKVAIGSGVAPLVIFMGVGAMTDFGPLLANPRTLLLGAAAQFGIFATVLGALTLNYFGLISFTLPQAAAIGIIGGADGPTAIYLSGKLAPELLGAIAVAAYSYMALVPLIQPPIMKALTSETERKIRMVQLRTVSKREKILFPVVLLMLVALLLPDAAPLLGMFCFGNLMRESGVVERLSDTVQNGLINIVTIFLGLSVGAKLVADKFLQPQTLGILLLGVIAFGIGTAAGVLMAKLLNLCSKNKINPLIGSAGVSAVPMAARVSNKVGLESDAQNFLLMHAMGPNVAGVIGSAIAAGVMLKYVLAM", - "output": "plasma membrane ; decarboxylation-driven active transmembrane transporter activity ; lyase activity ; sodium ion transport" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MSNVTHQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPRYDDADMVIVNTCGFIDSAVQESLEAIGEALNENGKVIVTGCLGAKEDQIREVHPKVLEITGPYSYEQVLQHVHHYVPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGDVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGVWTRLHYVYPYPHVDDVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGAGANELPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIVDEVDEEGAIGRSMADAPEIDGAVYLNGETNVKPGDIVRVKVENADEYDLWGSRV", - "output": "cytoplasm ; 4 iron, 4 sulfur cluster binding ; metal ion binding ; protein methylthiotransferase activity ; peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid ; tRNA modification" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MDGGTFDIQPIGRFYGSNTTIRRPREITCFSYDAEHKFHLGDSSLRYYYTPRLPADLNRGFDTFQKLDDTADEHLDALLETIMALEKETGKRCEADIITWRGMMTKILTAPFDNLNGFEMNATCFQVGGENNLYKIQQKQIQENQRMPPGMASQDLMAYWGYKFETLCLLQQPWDPTPRAEIESREDLVVNNNAQYCSVVRTGIGSTRLIIGGEVDAVWDCKPDRKEDPINWVELKTSAEIRNDRDMIKYERKLLKFWAQSFLLGVPKIIVGFRDNHGIVHRLEELETASIPNKVKKLGRGTWDGNICINFAAAFLEWLKSTIKEGGTWRIRKLEKSSLIQVFKIEETGTGDIISRSFLDWRSRS", - "output": "cytosol ; Las1 complex ; nucleus ; RNA polymerase II termination complex ; 5'-hydroxyl dinucleotide hydrolase ; enzyme regulator activity ; GDP binding ; metal ion binding ; mRNA 5'-diphosphatase activity ; phosphodiesterase decapping endonuclease activity ; RNA binding ; RNA NAD-cap (NAD-forming) hydrolase activity ; cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) ; deadenylation-independent decapping of nuclear-transcribed mRNA ; mRNA processing ; NAD-cap decapping ; nuclear polyadenylation-dependent rRNA catabolic process ; nuclear-transcribed mRNA catabolic process ; nuclear-transcribed mRNA catabolic process, exonucleolytic, 5'-3' ; nucleic acid phosphodiester bond hydrolysis ; positive regulation of termination of RNA polymerase II transcription ; termination of RNA polymerase II transcription, poly(A)-coupled" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MNINKSNLIWLDLEMTGLEPETDKILEIATVVTDADLNILAEGPTIAIHQSNELLDNMDEWCTTQHGKSGLTARCKASTYDEAYAVEQTIAFLKQWVPAGASPMCGNSIGQDRRFMNKYMRELEDFFHYRNLDVSTIKELARRWKPEVLAQVNKKGSHLALDDIKDSIMELKVYREKFFNL", - "output": "cytoplasm ; 3'-5'-RNA exonuclease activity ; nucleic acid binding" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MAAKDVRFSSDARDRMLRGVEILANAVKVTLGPKGRNVVIEKSFGAPRITKDGVSVAKEIELADKFENLGAQLVREVASKQNDAAGDGTTTATILAASIVKEGTKAVAAGLNPMDLKRGIDHAVEAIVADLKANSKKVTSNDEIAQVGTISANGDKSVGDMISTAMQKVGNEGVITVEEAKSLETELDVVEGMQFDRGYLSPYFITNAEKMIAELEDPYILVHEKKLSSLQAMLPVLEAVVQTGKPLVIIAEDVEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLEDIAILTGGTLISEELGIKLENVTLAMLGRAKRIRIDKEATTIIDGAGNKDDIEGRISQIKAQIAETTSDYDREKMQERLAKLAGGVAVLRVGGSTEVEVKEKKDRVDDALNATRAAVEEGVSPGGGVALLRAIKALENLPTDNSDQKAGIEIVRKAIQTPAKQIVDNSGGDGAVVVGKLLESNEYAFGYNAQTGEYGDMVKLGIIDPTKVVRTALQDAASIAGLLITTEATITEAPKKEAPLPPMGGGGMGGMGGMDF", - "output": "cytoplasm ; ATP binding ; ATP-dependent protein folding chaperone ; isomerase activity ; unfolded protein binding ; protein refolding" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MSELLSVALFLASVLIYAWKAGRNTWWFAATLTVLGLFVILNITLYASDYFTGDGINDAVLYTLTNSLTGAGVGKYILPGIGIALALVAVFGALGWVLRRRRHHPHHVGYSLLALLLALGSVDASPAFRQITELVKSQMRDGDPDFAVYYKEPAKTIPNPKLNLVYIYGESLERTYFDNDAFPNLTPELGALKNEGLDFSHTMQLPGTDYTIAGMVASQCGIPLFAPFEGNASASVSSFFPQNICLGDILKNSGYQNYFVQGANLRFAGKDVFLKSHGFDHLYGAEELKTVVADPSYRNDWGFYDDTVLDEAWKKFEALSRSGQRFSLFTLTVDTHHPDGFISRTCNRKRYDYDGKPNQSFSAVSCSQENIAEFINKIKASPWFKDTVIVVSSDHLAMNNTAWKYLNKQDRNNLFFILRGDKPQQETLAVKRNTMDNGATVLDILGGDNFIGLGRSSLSGQSLSEVFLNVKEKVLAMKPDIIRLWNFPKEIKDFTVDRDKNMIAFSGSHFRLPLLLRVSDKRVEPLPESEYSAPLRFQLADFAPRDNFVWIDRCYKMAQLWAPALALSTDWCVSQGQLGGQQTVQHVDKAQWQGKTAFKDTMIDMERYKGNVDTLKIVDNDIRYKADSFIFNVAGAPEEVKQFSGISRPESWGRWSNAQLGDEVKIEYKAPLPKKFDLVITAKAFGDNANRPIPVRVGNEEQTLVLGHDVSTITLHFNNPTDANTLVIAPPAPVSTNEGNILGHSPRKLGIGMVEIKVVNVES", - "output": "plasma membrane ; phosphatidylglycerol-membrane-oligosaccharide glycerophosphotransferase activity ; sulfuric ester hydrolase activity ; glucan biosynthetic process" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MARLKDYYQKELVAKLKTELGLDNIMEVPAIKKITLNMGVGDAAKDKKIMTFALNDLTAIAGQKPVVTKSKKSIAGFKIRDGWPIGAKVTLRGDRMYEFLDRLITIAIPRIRDFRGLSAKSFDGRGNYSLGMREQISFPEIDYDKVDSIRGLDISITTTAKNDDQGRALLKAFGFPFKS", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; tRNA binding ; translation" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MRIIGLTGGIATGKSTVARILERHGIPVADADQMARQALAVGSPIRERVLQRYGRAIQDPSGALDRRQLGRIVFADAAERAWLEAQIHPFVKARLREFLEAHGASAPPEEATEARPSCQCPHGEGHPTVCLMIPLLFEAHMENWASEIWVVTCTPEQQRQRLAQRDLLTAAEIEARLASQWPLEEKARRAHVVLDNSGSLAQLEAQVRQALGAHPREGGAICPTPPSRIE", - "output": "cytoplasm ; ATP binding ; dephospho-CoA kinase activity ; coenzyme A biosynthetic process ; phosphorylation" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MEGIQHPIPRTVEEVFSDFRGRRAGLIKALSTDVQKFYHQCDPEKENLCLYGLPNETWEVNLPVEEVPPELPEPALGINFARDGMQEKDWISLVAVHSDSWLISVAFYFGARFGFGKNERKRLFQMINDLPTIFEVVTGNAKQSKDQSANHNSSRSKSSGGKPRHSESHTKASKMSPPPRKEDESGDEDEDDEQGAVCGACGDNYGGDEFWICCDACEKWFHGKCVKITPAKAEHIKHYKCPSCTTSKKMKA", - "output": "nucleus ; metal ion binding ; methylated histone binding ; transcription cis-regulatory region binding ; transcription coregulator activity ; chromatin organization ; regulation of DNA-templated transcription" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MSNNAAYAVTPVKTTSTSSRTTFHFAAGLCSGLTSSILLQPADLLKTRVQQSQKTASLLPTIKTILSSPHPIRGLWRGTLPSALRTGFGSALYFTSLNALRQGLAQTEASMAIAASSSDGKSRTSSSALPKLSNWGNLATGAVARTAAGFVMMPVTVLKVRYESDYYAYRSLYSAGRDIVRTEGVRGLFSGFGATAARDAPYAGLYVLFYEQLKRRLASVASSEQSEQPLKSTSSSSINFVSGGLAAGLATAITNPFDAVKTRLQLMPGKYGNMIRAVRLMIREDGVRSLFGGLGLRITRKALSSALAWTVYEELILRAEAHWAEKDKIDL", - "output": "mitochondrial inner membrane ; glycine transmembrane transporter activity ; glycine import into mitochondrion ; heme biosynthetic process" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MRAYIYDEESQLSPQDEHESSQSVSKQELEKLGVLYWSIDSIDQVNSIAIQRDYKNRDQIICSPQAMGDIYQQKLDTFFEEHLHEDEEIRWVVEGSGYFDVRDQTDQRWVRIKVEKGDLLVLPPGIFHRFTVDKDNYIKAMRLFKDEPKWVALNRSTESESNPYRKAYIEQVGKAMTMGAF", - "output": "cytoplasm ; nucleus ; acireductone dioxygenase (Ni2+-requiring) activity ; acireductone dioxygenase activity ; iron ion binding ; nickel cation binding ; L-methionine salvage from methylthioadenosine ; methionine metabolic process" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MKITNITTYRLPPRWMFLKIETDEGIVGWGEPVIEGRARTVEAAVHEFGDYLIGQDPARINDLWQVMYRGGFYRGGPIMMSAIAGIDQALWDIKGKVLNAPVWQLMGGLVRDKIKAYSWVGGDRPAEVIDGIKKLRGIGFDTFKLNGCEEMGIIDNSRAVDAAVNTVAQIREAFGNEIEFGLDFHGRVSAPMAKVLIKELEPYRPLFIEEPVLAEQAEYYPRLAAQTHIPIAAGERMFSRFEFKRVLEAGGVAILQPDLSHAGGITECYKIAGMAEAYDVGLAPHCPLGPIALAACLHVDFVSHNAVFQEQSMGIHYNKGAELLDFVKNKEDFNMEGGFFKPLMKPGLGVEIDEARVIELSKNAPDWRNPLWRYEDGSVAEW", - "output": "galactonate dehydratase activity ; magnesium ion binding ; amino acid catabolic process ; D-galactonate catabolic process" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MRQALPLVTRQGDRIAIVSGLRTPFARQATAFHGIPAVDLGKMVVGELLARSEIPADAIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVSRACATSFQAVANVAESLMAGTIRAGIAGGADSSSVLPIGVSKALARVLVDGNKARTTRQRLTLFSRLRLRDLLPVPPAVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWAEGKLAEEVMTTYVPPYKNPFAEDNNIRGASTLADYAKLRPAFDRKHGSVTAANSTPLTDGAAAVIMMTESRAKELGLRPLGYLRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTMADLTLFDMHEAFAAQTLANLQLLGSERFAREVLGRAQATGEVDDAKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGFGLVTACAAGGLGAAMVLEAE", - "output": "cytoplasm ; acetyl-CoA C-acyltransferase activity ; fatty acid beta-oxidation" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MAMTVHCDIVSAERQLFSGLVEIVVASGVEGDLGIMPGHAPLLTRLKPGPVRVKKQNGEEEVFYVSGGFLEVQPKLVTVLADTAERAENMDAAEAERAKARAKEALEGKSSEMDYSRAAATLIEAVAQLRAIQQLKNKR", - "output": "plasma membrane ; proton-transporting ATP synthase complex, catalytic core F(1) ; ATP binding ; proton-transporting ATP synthase activity, rotational mechanism" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MSEAPESIETSPVVTPDVAESVQNQGVEVVQTEAPTEAQVVKTKSKKKRTKDPALYHTRKARIQVDPDSVNTDDRPPQTGTVYNIWFNKWSGGDKEDEKFNQKKADGRCSIARDSGYTRADKVPGSYFCLYFARGLCTQGHKCEFLHRLPVLTDMFSPTTDCFGRDRFFDYRDDMGGIGSISRVNRTLYVGRIHVSDAAKAGALDEIVSRHFSEWGDVDRIRVLHDKGVAFVTYATEVNAQFAKEAMAHQSLDSGEVLNVRWATQDPDPLAQAREQRRLEENAAEAIKRLLPQEYVDELEGRAKKSKPLLEGYEEDDSEKLKRIMNNQKEAGAEPAEEVKQIEPAPEPAAPVSTDTGMFNKSSLSALKALKKKKKTKAKVEE", - "output": "post-mRNA release spliceosomal complex ; Prp19 complex ; U2-type catalytic step 1 spliceosome ; U2-type catalytic step 2 spliceosome ; metal ion binding ; pre-mRNA binding ; U6 snRNA binding ; cell cycle ; mRNA cis splicing, via spliceosome ; positive regulation of cell cycle ; positive regulation of RNA splicing ; spliceosomal snRNP assembly" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MLNVMDKFCWLYEKPTCQGQIKALPEHFIVKENLGFEFAGKGEHFMVKIRKVGENTKYVVNELAKACGVKSRDVSWAGLKDRHAVTEQWISVHLPGKADPDLTDFVAEHPGIEVLETTRHDKKLRPGDLVGNWFQIRLLDLTNPEELALKLEQVKMHGVPNYFGQQRFGHGGNNVIKARSWGNDEFRLRDKSKRSFYLSAARSWLFNMVLSTRIEQGSVNSLMVGDCLQNAGEDNCFLAESITEELQASIDKGLVNITAPLVGDNALPTAADAEAFELAIIANEPSLLKLICDNRMRHERRTLLLKPQEMEWQFDGNDVVLSFALPAGCFATSVVRELLVEQEGSTHANIDQ", - "output": "RNA binding ; tRNA pseudouridine synthase activity ; tRNA pseudouridine synthesis" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MSSGGLLLLLGLLTLWEGLTPVSSKDRPDFCELPDDRGPCRGIFHAFYYNPDQRQCLEFIYGGCYGNANNFKTIDECKRTCAA", - "output": "extracellular region ; serine-type endopeptidase inhibitor activity ; negative regulation of peptidase activity" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MSGEVPPNINIKEPRWDQSTFIGRASHFFTVTDPRNILLTNEQLENARKVVHDYRQGIVPAGLTENELWRAKYAYDSAFHPDTGEKMTLIGRMSAQVPMNMTITGCMMTFYRTTPAVLFWQWINQSFNAVVNYTNRSGDAPLTVNELGTAYVSATTGAVATALGLNALTKRVSPLIGRFVPFAAVAAANCINIPLMRQRELKVGIPVTDENGTRLGESTNAAKQAITQVVISRILMAAPGMAIPPFIMNTLEKKAFLKRFPWMSAPIQVTLVGFCLVFATPLCCALFPQKSSMSVTSLEDELQASIQRTHPEIRRVYFNKGL", - "output": "mitochondrial inner membrane ; mitochondrion ; L-alanine transmembrane transporter activity ; L-serine transmembrane transporter activity ; monoatomic ion transmembrane transporter activity ; serine transmembrane transporter activity ; erythrocyte differentiation ; iron ion transport ; L-alanine transport ; L-serine transport ; one-carbon metabolic process ; serine import into mitochondrion" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MDITASMVKELREKTGAGMMDCKKALTEAEGNMDRAVEVLRERGLAAVAKKSGRIAAEGLVESYIHGGRIGVIVEVNSETDFVAKNQEFKDFVKDVALHIAASNPQYVRREDVDPALVEKEKEILTKQALNEGKPEKIVEKMVEGRIDKFYKEICLLEQPFVKDPDVTVGDLLTEKISKIGENISIRRFTRYEVGEGIEKKEENFAEEVAKQMAQN", - "output": "cytoplasm ; translation elongation factor activity" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MSELPDLSQIAPTLKAEILAEALPYIRQYHGKTVVIKYGGNAMTEERLKQGFARDVILLKLVGINPVIVHGGGPQIDQALKKIGKQGTFIQGMRVTDEETMEVVEWVLGGEVQQDIVTLINHFGGHAVGLTGKDGGLIHARKMLMPDRDNPGQYVDIGQVGEVEAINPAVVKALQDDAFIPVISPIGFGEDGLSYNINADLVAGKLAVVLNAEKLVMMTNIPGVMDKEGNLLTDLSAREIDGLFADGTISGGMLPKISSALDAAKSGVRSVHIIDGRIEHSVLLEILTEQPFGTMIRSH", - "output": "cytoplasm ; acetylglutamate kinase activity ; ATP binding ; arginine biosynthetic process via ornithine ; phosphorylation" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLDKVAYIRFASVYRSFEDIKEFGEEIARLED", - "output": "ATP binding ; DNA binding ; zinc ion binding ; negative regulation of DNA-templated transcription" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MSRLRIFADTNPATPEFDSRDGDAIAAELVKIGVTFERWHASAPVEPGATPEQVMDAYRADIDRISAERGFKTVDVVSIAPDNPKREEMRAKFLDEHFHKEDEVRFFVAGSGLFTLHVDAKVYEIECVKDDLIAVPDGTLHWFDMGPEPHFVAIRFFTEPDGWVGHFTGTEIAKQFPRYAPKKPHKAS", - "output": "acireductone dioxygenase (Ni2+-requiring) activity ; acireductone dioxygenase activity ; iron ion binding ; nickel cation binding ; L-methionine salvage from methylthioadenosine ; L-methionine salvage from S-adenosylmethionine" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MSSGTELLWPGAALLVLLGVAASLCVRCSRPGAKRSEKIYQQRSLREDQQSFTGSRTYSLVGQAWPGPLADMAPTRKDKLLQFYPSLEDPASSRYQNFSKGSRHGSEEAYIDPIAMEYYNWGRFSKPPEDDDANSYENVLICKQKTTETGAQQEGIGGLCRGDLSLSLALKTGPTSGLCPSASPEEDEESEDYQNSASIHQWRESRKVMGQLQREASPGPVGSPDEEDGEPDYVNGEVAATEA", - "output": "extracellular exosome ; membrane raft ; plasma membrane ; SH2 domain binding ; adaptive immune response ; B cell activation ; B cell receptor signaling pathway ; calcium-mediated signaling ; intracellular signal transduction ; mast cell degranulation" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MEKYIKEHTLKPNEIERYGRQLITPDIGVSGQMSLCNSSVLIIGAGGLGCPVALYLSSAGIGTLGLVDYDTVEISNLHRQIGHRESSKGISKAVSLSKTISELNSLIKVNTYETTFTSETAMEIIKNYDIVVDASDNVATRYLVNDACVLTGKPLVSGSALKWEGQITCYNYNNGPCYRCIFPTPPPVETVTKCSDGGVLGPIVGVIGSLQALEVIKILTNNKEGVLSGRLLIYDGMSAVFRTVRIRGKQSGCNVCGDKPTVTQLIDYTQFCQSNYSESAGKVDDRVDKTLIITVEQFNQSIKNNNNNHLLIDVRPKIQFDICSLPNSNNIPIEEIDKKESIEIIEKLIKEKVENNNNNNNNNENRDASDELSVYLVCRRGNKSQDAVKILDEKLKEFRDKFKLLHIKDGLLGWNESIDDSFPIY", - "output": "cytoplasm ; cytosol ; ATP binding ; metal ion binding ; molybdopterin-synthase adenylyltransferase activity ; molybdopterin-synthase sulfurtransferase activity ; nucleotidyltransferase activity ; thiosulfate sulfurtransferase activity ; URM1 activating enzyme activity ; Mo-molybdopterin cofactor biosynthetic process ; tRNA wobble position uridine thiolation" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MSTESMIRDVELAEEALPKKMGGLQNSRRCLCLSLFSFLLVAGATTLFCLLNFGVIGPNKEEKFPNGLPLISSMAQTLTLRSSSQNSSDKPVAHVVANHQAEEQLEWLSQRANALLANGMDLKDNQLVVPADGLYLIYSQVLFKGQGCPDYVLLTHTVSRFAISYQEKVSLLSAIKSPCPKDTPEGAELKPWYEPMYLGGVFQLEKGDLLSAEVNLPKYLDITESGQVYFGVIAL", - "output": "cell surface ; cytoplasm ; external side of plasma membrane ; extracellular region ; extracellular space ; membrane raft ; neuronal cell body ; phagocytic cup ; plasma membrane ; recycling endosome ; cytokine activity ; death receptor agonist activity ; identical protein binding ; protease binding ; transcription cis-regulatory region binding ; tumor necrosis factor receptor binding ; activation of cysteine-type endopeptidase activity involved in apoptotic process ; acute inflammatory response ; animal organ morphogenesis ; antiviral innate immune response ; apoptotic process ; apoptotic signaling pathway ; calcium-mediated signaling ; cell activation ; cellular extravasation ; cellular response to amino acid stimulus ; cellular response to amyloid-beta ; cellular response to lipopolysaccharide ; cellular response to molecule of bacterial origin ; cellular response to nicotine ; cellular response to organic cyclic compound ; cellular response to retinoic acid ; cellular response to toxic substance ; cellular response to type II interferon ; chronic inflammatory response to antigenic stimulus ; circadian rhythm ; cortical actin cytoskeleton organization ; defense response ; defense response to bacterium ; defense response to Gram-positive bacterium ; detection of mechanical stimulus involved in sensory perception of pain ; embryonic digestive tract development ; endothelial cell apoptotic process ; epithelial cell proliferation involved in salivary gland morphogenesis ; extracellular matrix organization ; extrinsic apoptotic signaling pathway ; extrinsic apoptotic signaling pathway via death domain receptors ; glucose metabolic process ; humoral immune response ; I-kappaB kinase/NF-kappaB signaling ; inflammatory response ; intrinsic apoptotic signaling pathway in response to DNA damage ; JNK cascade ; leukocyte migration ; leukocyte migration involved in inflammatory response ; leukocyte tethering or rolling ; lipopolysaccharide-mediated signaling pathway ; liver regeneration ; macrophage activation involved in immune response ; MAPK cascade ; microglial cell activation ; necroptotic signaling pathway ; negative regulation of alkaline phosphatase activity ; negative regulation of amyloid-beta clearance ; negative regulation of apoptotic process ; negative regulation of apoptotic signaling pathway ; negative regulation of bicellular tight junction assembly ; negative regulation of bile acid secretion ; negative regulation of blood vessel endothelial cell migration ; negative regulation of branching involved in lung morphogenesis ; negative regulation of cell population proliferation ; negative regulation of cysteine-type endopeptidase activity involved in apoptotic process ; negative regulation of cytokine production involved in immune response ; negative regulation of DNA-templated transcription ; negative regulation of endothelial cell proliferation ; negative regulation of extrinsic apoptotic signaling pathway in absence of ligand ; negative regulation of fat cell differentiation ; negative regulation of gene expression ; negative regulation of glucose import ; negative regulation of heart rate ; negative regulation of interleukin-6 production ; negative regulation of L-glutamate import across plasma membrane ; negative regulation of lipid catabolic process ; negative regulation of miRNA maturation ; negative regulation of mitotic cell cycle ; negative regulation of myelination ; negative regulation of myoblast differentiation ; negative regulation of myosin-light-chain-phosphatase activity ; negative regulation of osteoblast differentiation ; negative regulation of oxidative phosphorylation ; negative regulation of protein-containing complex disassembly ; negative regulation of signaling receptor activity ; negative regulation of systemic arterial blood pressure ; negative regulation of transcription by RNA polymerase II ; negative regulation of vascular wound healing ; negative regulation of viral genome replication ; osteoclast differentiation ; positive regulation of action potential ; positive regulation of amyloid-beta formation ; positive regulation of apoptotic process ; positive regulation of blood microparticle formation ; positive regulation of calcidiol 1-monooxygenase activity ; positive regulation of calcineurin-NFAT signaling cascade ; positive regulation of cell adhesion ; positive regulation of chemokine (C-X-C motif) ligand 2 production ; positive regulation of chemokine production ; positive regulation of chronic inflammatory response to antigenic stimulus ; positive regulation of cysteine-type endopeptidase activity involved in apoptotic process ; positive regulation of cysteine-type endopeptidase activity involved in execution phase of apoptosis ; positive regulation of cytokine production ; positive regulation of cytokine production involved in inflammatory response ; positive regulation of DNA biosynthetic process ; positive regulation of DNA-binding transcription factor activity ; positive regulation of DNA-templated transcription ; positive regulation of extrinsic apoptotic signaling pathway ; positive regulation of fever generation ; positive regulation of fractalkine production ; positive regulation of gene expression ; positive regulation of glial cell proliferation ; positive regulation of hair follicle development ; positive regulation of hepatocyte proliferation ; positive regulation of heterotypic cell-cell adhesion ; positive regulation of humoral immune response mediated by circulating immunoglobulin ; positive regulation of I-kappaB kinase/NF-kappaB signaling ; positive regulation of I-kappaB phosphorylation ; positive regulation of inflammatory response ; positive regulation of interleukin-1 beta production ; positive regulation of interleukin-18 production ; positive regulation of interleukin-33 production ; positive regulation of interleukin-6 production ; positive regulation of interleukin-8 production ; positive regulation of JNK cascade ; positive regulation of JUN kinase activity ; positive regulation of leukocyte adhesion to arterial endothelial cell ; positive regulation of leukocyte adhesion to vascular endothelial cell ; positive regulation of MAP kinase activity ; positive regulation of MAPK cascade ; positive regulation of membrane protein ectodomain proteolysis ; positive regulation of miRNA transcription ; positive regulation of mitotic nuclear division ; positive regulation of neuron apoptotic process ; positive regulation of neutrophil activation ; positive regulation of NF-kappaB transcription factor activity ; positive regulation of NIK/NF-kappaB signaling ; positive regulation of nitric oxide biosynthetic process ; positive regulation of nitric-oxide synthase activity ; positive regulation of nitrogen compound metabolic process ; positive regulation of osteoclast differentiation ; positive regulation of oxidative stress-induced neuron death ; positive regulation of peptidyl-serine phosphorylation ; positive regulation of phagocytosis ; positive regulation of phosphatidylinositol 3-kinase signaling ; positive regulation of podosome assembly ; positive regulation of programmed cell death ; positive regulation of protein catabolic process ; positive regulation of protein kinase activity ; positive regulation of protein kinase B signaling ; positive regulation of protein localization to cell surface ; positive regulation of protein localization to plasma membrane ; positive regulation of protein phosphorylation ; positive regulation of protein transport ; positive regulation of protein-containing complex assembly ; positive regulation of protein-containing complex disassembly ; positive regulation of receptor signaling pathway via JAK-STAT ; positive regulation of smooth muscle cell proliferation ; positive regulation of superoxide dismutase activity ; positive regulation of synaptic transmission ; positive regulation of synoviocyte proliferation ; positive regulation of transcription by RNA polymerase II ; positive regulation of translational initiation by iron ; positive regulation of type II interferon production ; positive regulation of tyrosine phosphorylation of STAT protein ; positive regulation of vascular associated smooth muscle cell proliferation ; positive regulation of vitamin D biosynthetic process ; protein kinase B signaling ; protein localization to plasma membrane ; regulation of branching involved in salivary gland morphogenesis ; regulation of cell population proliferation ; regulation of endothelial cell apoptotic process ; regulation of establishment of endothelial barrier ; regulation of I-kappaB kinase/NF-kappaB signaling ; regulation of immunoglobulin production ; regulation of inflammatory response ; regulation of insulin secretion ; regulation of osteoclast differentiation ; regulation of protein phosphorylation ; regulation of protein secretion ; regulation of reactive oxygen species metabolic process ; regulation of synapse organization ; regulation of transcription by RNA polymerase II ; response to 3,3',5-triiodo-L-thyronine ; response to activity ; response to bacterium ; response to ethanol ; response to fructose ; response to glucocorticoid ; response to gold nanoparticle ; response to Gram-negative bacterium ; response to hypoxia ; response to isolation stress ; response to lipopolysaccharide ; response to macrophage colony-stimulating factor ; response to mechanical stimulus ; response to nutrient levels ; response to organic cyclic compound ; response to organic substance ; response to paracetamol ; response to radiation ; response to virus ; response to xenobiotic stimulus ; sequestering of triglyceride ; signal transduction ; skeletal muscle contraction ; toll-like receptor 3 signaling pathway ; tumor necrosis factor-mediated signaling pathway ; vascular endothelial growth factor production ; vasodilation" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MKEIIIWSAYLDAEKSRKEGRKIPKELCVNNPKIKDIYNSLRKLGYNAEIVKNKCHPKEWWEIVGYIKVKVNDDIPKLEILKKICENLKK", - "output": "signal recognition particle ; 7S RNA binding ; SRP-dependent cotranslational protein targeting to membrane" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MDSYEKEESVASTSGIQDLQTLSELVGPENAGEGELTIAEEPEENPRRPRRYTKREVKCVSYHAYKEIEDKHPQHIKLQDWIPTPEEMIAQKVQNQDLGTILSFDVTCLKSITSLGRNDPGDDPSIMSHVLPVVTPWPMSQDHYAPTLFGILDRYYQGYLKSPATYQTWKFTCQVDPSGKRFMETQFWVPPLGQVNIQFYKNYQILTCCQAVDPFANIFHGTDEEMFDIDSGPDVWCSPSLCFKVIYEGAMGQKQEQKTWLCRLGHGHRMGACDYRKVDLYAMRQGKENPYGDRGDAALQYAYQVKRGCKAGCLASPVLNYKALQFHRTIMADFTNPRIGEGHLAHGYQAAMEAYGPQRGSNEERVWWNVTRNQGKQGGEYYREGGEEPHYPNTPAPHRRTWDERHKVLKLSSFATPSDIQRWTTKALPYGWKVVTESGNDYTSRRKIRTLTEMTQDEIRKRWESGYCDPFIDSGSDSDGPF", - "output": "extracellular region ; host cell cytoplasm ; host cell nucleus ; positive regulation of DNA-templated transcription ; viral process" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MQELEERIQSEGTVKAGNVLKVDAFLNHQCDVRLFDRMGSAWAAHFAGKHITKILTIEASGIGIACVAAQHFGNVPVVFAKKAQSINLDGDQYTTTVYSFTKQKEFPVIVAKKYLNAGDHVLLIDDFLANGKALRGLIDLCEAAGATVEGIGIAVEKGFQGGGDALRAEGYDVDSLAIVESMNPETGEITFRH", - "output": "cytoplasm ; xanthine phosphoribosyltransferase activity ; purine ribonucleoside salvage ; xanthine metabolic process ; XMP salvage" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYIGWDKHYGFQLYQSDPNGNYGGWKATCIGNNSAAAVSMLKQDYKEGEMTLKSALALAIKVLNKTMDVSKLSAEKVEIATLTRENGKTVIRVLKQKEVEQLIKKHEEEEAKAEREKKEKEQKEKDK", - "output": "nucleus ; P-body ; proteasome core complex ; proteasome core complex, alpha-subunit complex ; ubiquitin-dependent protein catabolic process" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MFPMVTEFMNYGQQTIRAARYIGQGFMITLSHANRLPVTIQYPYEKLITSERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELSTYDRHELNYNQIALGRLPMSIIDDYTIRTILNLPEIKT", - "output": "chloroplast thylakoid membrane ; 4 iron, 4 sulfur cluster binding ; iron ion binding ; NADH dehydrogenase (ubiquinone) activity ; quinone binding ; photosynthesis, light reaction" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MVRSPVSDKFCIPDTLASWPYPRILNPHYAEEKAASAAWTKGFGAFGPKAQDAFDRCDFNLLACLAYPIATPERCRSGCDLMNLFFVIDEHSDTHGEETVRKMKDVVMDAIRNPHKPRPNDEWIGGEIARQFWERAMCYASEISQRRFIDTFDEYLESVVDQAADRDSARIRDIESYINIRRNTIGAKPSFVIMEQGMDIPDNVFENEVFQRLRMATIDMLCLGNDIVSYNIEQARGDDSHNIVRIVMNELDTDVPRAMDWVAQRHTQLEREFFTALSELPTWGEPIDGWVKEYVYGLGNWVRANDQWSFESQRYFGTKGMEIMKSRWLSVLPKVRPAEVGPQLVDQSLL", - "output": "lyase activity ; metal ion binding" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MKNVPYLSAVGAIMYLMVVTRPDLAAAVGVLSQFASDPCPTHWQALKRVLRYLQSTQTYGLEFTRAGTAKLVGYSDADWAGDVESRRSTSGYLFKLNGGCVSWRSKKQRTVALSSTEDEYMALSEATQEAVWLTVRTRRTKG", - "output": "extracellular region ; host cell nucleus" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MSSYSQLFAQHLDTLQQRTRDILQQQGLSGLAIHSGQTHRIFLDDQDYPFKVNPQFKAWLPVLDNPHCWLLVDGVNKPVLLFYRPVDFWHKVAELPNAFWVDFFDIRFLTRPEQVADHLPANKQEWAYLGGHLEVAELLGLGQPNPEAVLNYLHYHRAYKTAYELECLRDANRIGVRGHIAAKDSFMAGASEFEINLAYMKAVGQGANEAPYGNIVAINRNAAILHYTHLSAQRVPDAERYSFLIDAGVDVHGYASDITRTWAWRRGEFADLIAALDAQQQEIIEEIKPGRRYSELHLQMHHRLARLLQATELVDMSVDEMIHTGVTNVFFPHGLGHFLGLQVHDAGGFMQDERGTHLSAPEQFPYLRCTRVMEVGQVFTIEPGLYFIDSLLEPLRLGEQGKRVNWNKVEALRPYGGIRIEDNVVLHANGVENLTRQAGL", - "output": "metal ion binding ; metalloexopeptidase activity ; phosphoric triester hydrolase activity ; proline dipeptidase activity ; proteolysis" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MSGNRGGSYISGIVPSFKERRPFHERQKDVEEIRSQQPNKVPVIIERFDGERSLPLMDRCKFLVPEHITVAELMSIVRRRLQLHPQQAFFLLVNERSMVSNSMSMSNLYSQERDPDGFVYMVYTSQPAFG", - "output": "autophagosome ; autophagosome membrane ; cytoplasm ; cytoplasmic vesicle ; cytosol ; plasma membrane ; microtubule binding ; ubiquitin protein ligase binding ; autophagosome assembly ; autophagy of mitochondrion ; cellular response to nitrogen starvation ; cellular response to toxic substance ; defense response to Gram-positive bacterium ; macroautophagy ; plasma membrane repair ; positive regulation of autophagosome maturation ; xenophagy" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MTRMAEKPISPTKTRTRFEDIQAHYDVSDDFFALFQDPTRTYSCAYFEPPELTLEEAQYAKVDLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERLDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFAEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSVSYHPYEMAARGKKLSFETARFIKFIVTEIFPGGRLPSTEMMVEHGEKAGFTVPEPLSLRPHYIKTLRIWGDTLQSNKDKAIEVTSEEVYNRYMKYLRGCEHYFTDEMLDCSLVTYLKPGAAA", - "output": "methyltransferase activity ; methylation ; mycolic acid biosynthetic process" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MLDFLAITLSGKPPQVIQGETVNLKWQWLGEGILTLVPHRSYTQSVVISAGIHGNETAPIEILNQLVTDLLAGQLPLSVRLLVLLGNPPAIRKGKRYLSNDINRMFGGRYQHYTPSDETRRASTLEQRVMAFFQASHTSERLHYDLHTAIRGSYHPRFGLLPYQQTPYSAAMFRWLRDIELDALVMHTSAGGTFAHFSSERCQAASCTLELGKALPFGENQLSQFSAITQGLRSLVSDSALPARKTENMKYYRVVKSLLRQHPDFKLRVAEDTVNFTRFAQGTLLTEQPNDNYRVEHPYEWILFPNPHVALGLRAGMMLVKMCESELPIT", - "output": "hydrolase activity, acting on ester bonds ; succinylglutamate desuccinylase activity ; zinc ion binding ; arginine catabolic process to glutamate ; arginine catabolic process to succinate" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MDYQTFEKVNKFINVEAYIFFLTQELKQQYKLSLKELLILAYFYYKNEHSISLKEIIGDILYKQSDVVKNIKSLSKKGFINKSRNEADERRIFVSVTPIQRKKIACVINELDKIIKGFNKERDYIKYQWAPKYSKEFFILFMNIMYSKDFLKYRFNLTFLDLSILYVISSRKNEILNLKDLFESIRFMYPQIVRSVNRLNNKGMLIKERSLADERIVLIKINKIQYNTIKSIFTDTSKILKPRKFFF", - "output": "cytoplasm ; DNA binding ; DNA-binding transcription factor activity ; regulation of DNA-templated transcription" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MASLADRVRGNGRIAAGLLLNLLVSICIVFLNKWIYVHYGFPNMSLTLVHFVVTWLGLYVCQKLDIFAPKSLPPSKLLLLALSFCGFVVFTNLSLQNNTIGTYQLAKAMTTPVIIVIQTLCYKKTFSTKIRLTLIPITLGVILNSYYDVKFNFLGTVFAALGVLVTSLYQVWVGAKQHELQVNSMQLLYYQAPMSSAMLLVAVPFFEPVFAEGGIFGPWSVSALLMVLLSGVIAFMVNLSIYWIIGNTSPVTYNMFGHFKFCITLFGGYVLFKDPLSINQGLGMLCTLFGILAYTHFKLSEQEGSKSKLVQRP", - "output": "Golgi apparatus ; membrane ; antiporter activity ; nucleotide-sugar transmembrane transporter activity" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MFKENTIKLGIAPIAWTNDDMPELGAENTFEQCISEMALAGFNGSEVGNKYPRNTVVLKKSLELRNLEIASAWFSTFLTTKPIEETVEEFIKHRDFLHDMGAKVIVVSEQGHSIQGLMDVPLFKNKPVFTEEEWDKLADGLHHLGKLAQEKGLHIVYHHHMGTGVQTTAEIEKLMDMTDPELVSLLFDTGHLVFSGEEPLYILKKYLSRIKHVHLKDIRQEVVDIVKENELSFLQAVKNGAFTVPGDGVIGFDKVFTILANSDYKGWFVVEAEQDPALANPFEYALKARKFIQEKAGL", - "output": "manganese ion binding ; myo-inosose-2 dehydratase activity ; inositol catabolic process" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MTAGLLTAGDPDQVTFEDVVVDFTQEEWGHLEPAQRTLYRDVMLETFGLLVSVGHWLPKPDVISLLEQEAELWAADKGGPRGVCPDLETRPQSKLSTENQGVTEEIPNSALVERFLQESLWHSKDEGAAGHREQGPEKSDSCVVQAACTLVKTLTEEQQQGDGCGENLSLRPDLPTQPMTPERQGAPTWGTHGQRENPDSNAQQKTCAKEKPYGCQECGKAFSHSLALIEHHRTHTGERPYECPECGKGFRNSSALTKHQRIHTGEKPYKCAQCGRTFNQIAPLIQHQRTHTGEKPYECSECGKSFSFRSSFSQHERTHTGEKPYTCSQCGKAFRQSIHLTQHLRIHTGEKPYQCGECGKAFSHSSSLTKHQRIHTGEKPYECQACGKAFTQITPLIQHQRIHTGERPYECSECGRAFSQSTLLTEHRRIHTGEKPYGCNECGKAFSHSSSLSQHERTHTGEKPYACSQCGKAFRQSTHLTQHQRTHTGEKPYECSDCGKAFSHSSSLTKHQRIHTGEKPYECNECGKAFSQLAPLIQHQRIHTGEKPYECNQCGRAFSQSSLLIEHQRIHTKEKPYGCNECGKSFSHSSSLSQHERTHTGEKPYDCQDCGKSFRQRTHLTQHQRIHTGEKPYECRDCGKAFTHSSSFIKHQRTHTG", - "output": "nucleus ; metal ion binding ; RNA polymerase II cis-regulatory region sequence-specific DNA binding ; cytoskeleton organization ; regulation of cell morphogenesis ; regulation of DNA-templated transcription" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "TNTPEQDRYLQAEKYIEFYVIVDNRMYRYYNYDKPAIKIRVYEMINAVNTKFRPLKIHIALIGLEIWSNEDKFEVKPAASVTLKSFREWRQTVLLPRKRNDNAQLLTGINLNGTAVGIAYPGSLCTQRSVFVVQDYNRRMSLVASTMTHELGHNLGIHHDEASCICIPGPCIMLKKRTAPAFQFSSCSIRDYQEYLLRDRPQCILNKPLSTDIVSPAICGNYFVEEGEECDCGSPAACQSACCDAATCKFNGAGAECRAAKHDCDLPELCTGQSAECPTDSLQRNGHPCQNNQGYCYNGKCPTLTNQCIALLGPHFTVSPKGCFDLNMRGDDGSFCRMEDGTKIPCAAKDVKCGRLYCTEKNTMSCLIPPNPDGIMAEPGTKCGDGMVCSKGQCVDVQTAY", - "output": "extracellular region ; metal ion binding ; metalloendopeptidase activity ; toxin activity ; proteolysis" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MQWSDEGLVLGARRHGETSVVLELMTAGHGRHLGLVHGGRSRRMQPVLQPGNRVRAVWRARLDEGLGHFAVEPIESAAGRLMGSRLALYGLAHAAALLRLLPERDPHPSLYAAAQVLVAHLTDPAIAPALMVRFELAVLADLGFGLDLSACAATGSNAYLAYVSPKSGRAVSAAAGEPWRDRLLALPDFLVAREAGGTGATPTPRDVRQGFTLTGYFLDQHVWHPRGVAPPEARELFVALGTADAG", - "output": "DNA recombination ; DNA repair" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MELVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEMLA", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MALNLQDKQAIVAEVSEVAKGALSAVVADSRGVTVDKMTELRKAGREAGVYMRVVRNTLLRRVVEGTPFECLKDTFVGPTLIAYSMEHPGAAARLFKEFAKANAKFEVKAAAFEGELIPASQIDRLATLPTYEEAIARLMATMKEASAGKLVRTLAAVRDAKEAA", - "output": "large ribosomal subunit ; large ribosomal subunit rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MKKSNNNLTLYKGYINREDRERLHGHKSFVIWFTGLPASGKSTIAHLVEKELYKRGCSTYVLDGDNVRYGLCSDLGFSIEERKENIRRVGELVKLFVDAGIIVITSFISPFKEDREKVRSLFKEEDFIEVYTKCPVETCSLRDQKGIYKKAIKGEIKNFTGISAPYEEPENPEITIFTDIDSPIEACQKILRYIKDKLKL", - "output": "adenylylsulfate kinase activity ; ATP binding ; hydrogen sulfide biosynthetic process ; phosphorylation ; sulfate assimilation" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MGVSIVLGSQWGDEGKGKITDMLAQQATLCCRAAGGHNAGHTIVHGNKTYDFHILPSGLISPSCINLIGAGTVVHVPSFFKELASLEEKGLEGASKRIFISDRAHVCLQLHSVVDGLEEAKLGGRKVGTTGKGIGPCYSDKASRRGIRVGEILDEAVFERKLRSLDAGYRARFGDLEYNVEEELAQFKEYRKLLGPYIVDQLAFLQKYKDSPNTLVEGANALMLDLDHGTYPYVTSSSTGLGGAMQALSLNPTSIKSVIGVVKAYTTRVGSGPFPSEQFNADGDKLQSVGREFGVTTGRRRRCGWLDLVVCRYSQAINHYTALNLTKLDVLDDFDEIKVGVAYILPDGTRTENTIPADAEVLEKVKVEYVTLPGWKSNTMGVKKYEDLPDNARAYIEYIERELGGVPVKWIGTGPARDDMIARE", - "output": "cytoplasm ; adenylosuccinate synthase activity ; AMP binding ; GMP binding ; GTP binding ; magnesium ion binding ; sulfinylpropanyl adenylate synthase ; 'de novo' AMP biosynthetic process ; cellular response to cadmium ion ; fumarate metabolic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MENNTAVLGAGFSWGFKSDNVMKCQEQEEQQARENEKSLNSMVANLVQAQGMDPKGRKRRLDEPTNPQPQMMVPPRKYNVSKRRPHHSTISGQPLPLHRGLELMSKDQLQYILIEVMKNYPISQQLVQNKLVDFNFSIEKCEILLKEKLQQLHESIPYSRSHDYQRLSDYAFVRMKPHILEFLNCLVDCVLDRIPPRVDNLHESLKILDMTTDMVTKLPRFQLASNNYYYDKCLEQLACLWCTVIEHIARDVIMTVNDAPLLRNWIQKLELYNELCHGILTKPLNQFKSLAVVDAGVTDSNSTKGTNATRNRWSGSTDNYTVGDNQ", - "output": "cytoplasm ; nucleus ; nuclear protein quality control by the ubiquitin-proteasome system ; proteasome localization ; protein transport" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MSITKDQIIEAVASMSVMEVVELIEAMEEKFGVSAAAAVMAGPAAAEAVEEKTEFDVVLTAAGANKVAVIKAVRGATGLGLKEAKDLVEAAPANLKEAVSKDEAEALKKELEAAGASVEIK", - "output": "ribonucleoprotein complex ; ribosome ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MVHLKALASGTLFASLASSAVISRQAAASINDAFVAHGKKYFGTCSDQALLQNSQNEAIVRADFGQLTPENSMKWDALEPSQGSFSFAGADFLADYAKTNNKLVRGHTLVWHSQLPSWVQGITDKDTLTEVIKNHITTIMQRYKGQIYAWDVVNEIFDEDGTLRDSVFSQVLGEDFVRIAFETAREADPNAKLYINDYNLDSADYAKTKGMVSYVKKWLDAGVPIDGIVSLLPPRDEGLTSCTALTALASTGVSEVAVTELDIEGASSESYLEVVNACLDVSSCVGITVWGVSDKDSWRSSTSPLLFDSNYQAKDAYNAIIDAL", - "output": "extracellular region ; endo-1,4-beta-xylanase activity ; xylan catabolic process" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MSSAHFNRGPAYGLSAEVKNKLAQKYDHQREQELREWIEGVTGRRIGNNFMDGLKDGIILCEFINKLQPGSVKKVNESTQNWHQLENIGNFIKAITKYGVKPHDIFEANDLFENTNHTQVQSTLLALASMAKTKGNKVNVGVKYAEKQERRFEPEKLREGRNIIGLQMGTNKFASQQGMTAYGTRRHLYDPKLGTDQPLDQATISLQMGTNKGASQAGMTAPGTKRQIFEPGLGMEHCDTLNVSLQMGSNKGASQRGMTVYGLPRQVYDPKYCLNPEYPELSEPTHNHHPHNYYNSA", - "output": "actin cytoskeleton ; cytoskeleton ; actin binding ; actin filament binding ; calmodulin binding ; actin filament organization ; actomyosin structure organization ; negative regulation of vascular associated smooth muscle cell proliferation" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MNLQRLSIFGTDNIGVYIYTNNKYTVVPRGLDSETKENIVQILGTELIEAEISRSFLLGIFISGNDNGILLPKSTIDDEFRFLKENLRDCRVEVLNSKVTALGNTILTNNKAALIYPEFNDIEEKIIKETLGVEEIRRGKIAQMITVGSVGVVTNKGGLVHVDTSEKELKELEKLFSVKIDIGTVNFGSVFIRSGLVANDKGTLVGASTTGPEILRIQKALGE", - "output": "ribosome binding ; translation initiation factor activity ; cytosolic ribosome assembly" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MSHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEILGPVLILNDAFGALSCALAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNEPPLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRSEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHYARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVKLGRRR", - "output": "cytoplasm ; 23S rRNA (guanine(1835)-N(2))-methyltransferase activity ; nucleic acid binding" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MALPLSGTRHLTRALLSNVTLMAPPRIPSSVHYGGSRLGCSTRFFSIRCGANRSGSTYSPLNSGSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGSEEEAKKRIYNVSCERYLGFGCEIDEETSTKLEGLPGVLFVLPDSYVDPENKDYGAELFVNGEIVQRSPERQRRVEPQPQRAQDRPRYNDRTRYSRRRENTR", - "output": "chloroplast ; endoplasmic reticulum ; mitochondrion ; protein dimerization activity ; protein homodimerization activity ; cytidine to uridine editing ; endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) ; mitochondrial mRNA modification ; mRNA processing ; plastid organization" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MARTRNRFDRTPFQTAITDLSHDGRGVARRDGEGGKVTFISGALPGELVRAEPTARSRHFDEAKTVEVLEASPQRVAPRCPHFGVCAGCVLQHLEESQQIVAKQRVLMDNLERIGHVTPQAVLPGLTGDNWGYRRKGRFSVRRVEKKAKTLVGFRELDPRFVADLSVCYTVIPQIGEKIPLLAALVEGMDGKRDIPQIEFIAGDDAVALTIRHMQPLSARDQQAWIAFAQEHGFAIFLQPGGVDSVHPLWPQEVPLSFRLPQWDVDLAFRPLDFIQVNASLNQKMIVHALALLDAKPDDRVLDLFCGLGNFTLPLARVVREVVGVEGDAGLVARAKDNAQRNGLDNAQFYAADLTQDQRNAAWMRQGFDKLLLDPPRSGALEVLQQLPLKTFERIVYVSCHPGSLARDAGYLVNEQGFTLVSAGAMDMFPHTAHVESIAVFERR", - "output": "4 iron, 4 sulfur cluster binding ; iron ion binding ; RNA binding ; rRNA (uridine-C5-)-methyltransferase activity" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MDTAFVKDFIDNLLENDGLKLKRAIGVGIFLFNKLKEDAPDYILESLKEVDKLPFEKKKAVLREVRKFLSEYEKRKKEGNFLEKTKRKPIDVFFNPIEKVKILTKTQISTLKALGIETVYDALFYFPEKYEDKRLNTSIKTAKVGEKVALKVKVKEVKIKENERYTLEVVCTDGTGYITLKYRYKNPHFALKAFRKGMEIVVYGKLKSFKGEKYMVHPEVKSPSSEELGKIIPVYYVRKRGELQEISSKTKQKRVRTALTALSESLYRYFPEYMPDYLIEKYNFPDIALCIKELHNPKDISVNALNSFTDLYHKRVIYDELFLFQLALLLKKQEIKKEKAPKVNVDEKFLRKAIEKLPFKLTRAQERAIKEILEDLSRDVPMNRLLQGDVGSGKTIVAILTSLAVVKSGYQVAVMVPTEILAHQHYKKFSEMLKDYGVNVALLTGSLTPSQKKSVYKHVKEGNIHVLVGTHALIQDKVEFKNLGYVIIDEQHRFGVMQRKLLLEKGKGLYPHCLVMSATPIPRTLALSIYGDLDISIIDELPPGRKEVITKLYFESQKEEVYKKVEEELKKGNKVYVIYPLIEESEKLNLKAATEEYERWKKLFPDRKVLLLHGKMPDKEKLAVMEEFKREGDILVSTTVIEVGIDVPEATVMVIEDAHRFGLSQLHQLRGRVGRSDKEAYCLLVVPDEIKNEKNESLKRLRVFVKTTDGFKIAEEDLKLRGPGEIIGVSQSGYFGFRVANLARSQDRALLGVARKDAEELLKNNPNLENLQDLKKLLIKKYGDKMELSFVA", - "output": "ATP binding ; ATP hydrolysis activity ; DNA binding ; DNA helicase activity ; DNA recombination ; DNA repair" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "DRPRPARLSHARFSKNHSGRTHSMKDKAGRKHRPLDVFDFPDHSQLSSFSRLGENEKDEESYETFDPPLHSTAIYADEEEFSKQCGSHLPSTPQEKEAKRSSDTSEIEASENESVKISAKKPRRKLKPISDESESPEESDVRRKVKPTENISTQHEAVSATALPGLSEKPAEAVTPQKTGPQSAESSAEKATLATEHQLETQKNKMLPGKRKKPRSYTTDTSDCAPVWCLKEKKASEIMELDVFLSAFENILLEYEQKIDSRVCKAAINKFHSNLKEELIKMVQEIQMLKTLKRKNAKIISNIEKKRQRLIEVQDELLQVEPELKQLQIKYEELQERKASLRKAAYFLSNLKQLHQDYSDVQEEEPSVKETYDSSSLPALLFKARPLLGAEHHLQNINYQLENLLDQK", - "output": "cytoplasm ; kinetochore ; nucleus" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MKNTTNTKRTKFIFVTGGVLSSLGKGLAAASIGALLESRGLSITFQKLDPYINVDPGTMNPFQHGEVYVTDDGAETDLDMGHYERFTNAVMGQKNNFTSGRIYHTVINKERRGEYLGGTVQVIPHITDEIKKSVRQLDGSVDIAIIEIGGTVGDIEGLPFIEAIRQLRGDLGRDYTLFIHLTLVPYIKTAGEVKTKPTQHSVRELRADGIQPDILVCRTEVPLEENIKAKIALFCDVQQDAVINCVDVDSIYKLPIALHAEGLDSKILELLNIWTANPNIKPWQDLVENIQNPKNEVTIAITGKYVDLTEAYKSLHEALIHGGLANHTKVKLRYVSAEDLESGDPDSYLKGCDGILVPGGFGRRGVEGKIKAITYARENRIPFFGICLGMQLAVVEFARNMAGMSEAHSTELEPNSPDPVIYLTKEWFDYRTNKIQRRDENSDLGGTLRLGAYPCVLQQESHAGDAYGTQEVFERHRHRFEFNNDYRQQLIEKGLVISGTSPDGDLVEIVEIEDHPWFVGCQFHPEFKSKPMQAHPLFRDFISAAVANKKG", - "output": "ATP binding ; CTP synthase activity ; glutaminase activity ; metal ion binding ; 'de novo' CTP biosynthetic process ; glutamine metabolic process" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MAVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKSFELEADGLLAICIQHEMDHLVGKLFIDYLSPLKQQRIRQKVEKLDRLNARA", - "output": "metal ion binding ; peptide deformylase activity ; translation" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MTTTLPAYDEVVARYEPVIGLETHVELGTNTKMFCGCPTDFGGAPNTRVCPVCLGLPGSLPVANRAAVEATIRIGLALNCSIAEWCRFARKNYYYPDMPKNYQISQYDEPLCVDGYLDVEVDGEPVRISIERVHMEEDTGKTLHVGGATGRIHGATESLVDYNRAGIPLVEIVTKPIPGAGAMAPEVARAYVTELRDVLRSLGVSDVRMEEGSLRCDVNTSLNLPGEQWGTRTETKNVNSLRSVERAVRSEMIRQASVLEGGGRITQETRHFHEDTGDTTSGRSKETATDYRYFPEPDLVPVAPDPTWVAELKAALPELPRLHRRRLQQEWGLSDLDMQSILNAGAVELIEATIAAGATPTAARKWWLGELSRRANEAGVELADIGATPEQVAELQGLVDAGKLTDKLARTVLEHVVAGEGSPAKIMADRNLEVVSDTGALTAAVDEAIAANPAIADKVRGGKVAAAGALVGAVMKTTRGQADAKTVRELILERLGVQG", - "output": "asparaginyl-tRNA synthase (glutamine-hydrolyzing) activity ; ATP binding ; glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity ; translation" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MSGSQTLVVKLGTSVLTGGSRRLNRAHIVELVRQCAQQHAKGHRIVIVTSGAIAAGREHLGYPELPATIASKQLLAAVGQSRLIQLWEQLFSIYGIHIGQMLLTRADLEDRERFLNARDTMNALLDNRIVPVINENDAVATAEIKVGDNDNLSALAAILASADKLLLLTDQAGLYTADPRNNPEAELIREVHGIDDVLRGMAGDSVSGLGTGGMATKLQAADVACRAGIDVVIAAGSQVGVIADVIDGTPVGTRFHSLETPLENRKRWIFGAPPAGEITVDDGAVFAIMERGSSLLPKGIRSVKGDFSRGEVIRIRNLNGRDLAHGVSRYNSDALRMLAGHHSQQISEILGYEYGPVAVHRDDMIVS", - "output": "cytoplasm ; ATP binding ; glutamate 5-kinase activity ; RNA binding ; L-proline biosynthetic process ; phosphorylation" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MESYIQNLFAERIGGKSFGKEDVIYKFEKIKRAKQAAKLKYPDMELIDMGVGEPDEMADESVVEVLCEEAKKHVNRGYSDNGVQALKDEIPIYLEKIFGVKDLDPVNEVVHSIGSKPALAYITSVFINPGDVTLMTVPGYPVTATHTKWYGGSVETLPLLEKNNFLPELDAISKEVRENAKILYLNYPNNPTGAQATKKFYKEAVDFAFENDLIVIQDAAYAALTYGDKPLSFLSVKDAKEVGVEIHSFSKAYNMTGWRLAFVAGNELIVRGFAAVKDNYDSGQFIPIQKAGIHCLRHPEITEKTRAKYERRLSKMVKILKEAGFNAKMPGGTFYLYVKAPIGTKDGAKFANAEEFSQFMIKEKLISTVPWDDAGNFVRMAACFEAFKDGEISIEEEDRILNEVKRRLTEVEFVFE", - "output": "cytoplasm ; L,L-diaminopimelate aminotransferase activity ; pyridoxal phosphate binding ; lysine biosynthetic process via diaminopimelate, diaminopimelate-aminotransferase pathway" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MIDTDGYRPNVGIIICNNNAQVLWAKRFGQHSWQFPQGGIKEGETPEQAMYRELYEEVGLKPEHVKLLATSRHWLRYKLPKRLVRWDSPDPVCIGQKQRWFLLQLISDEQQIEFEACGNPEFDAWRWVTYWYPVRQVVSFKCEVYRCALKEFSAVAFSLMKKSSDKKRNKRPRRASFYKKR", - "output": "pyrophosphatase activity" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MVVILEHEIPQGSQLYFGKSARLKRRIEERASQILYTAGFEEIITPSFSFLEHQRDTSSREVLRLSNEKNHQIALRNDTTLDVVRIITKRLGRSTEHRRWFYIQPVFSYPTNEIHQIGAESLGEADAKSMLKVAIEIFRSLELEPILQLSNMRIPLLCAEHSRLGLEVFAKMQVEKIMASEEYLGELLQIKNAQDLQRVTSKVPSFLKEELEKLRALAEGIEYPRFVFAPLYYAPMDYYNGIFFRMFEGNSTLLSGGIYEMDELQSCGFGLYTDQLIEKILRHNEG", - "output": "cytoplasm ; histidine biosynthetic process" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MIKNEQPPLSFEEAMEQLEEVVEQLEQGDVPLEEAISMFQKGMNLSKVCHEKLATVEKQMDQILKEDGNFEETVLQEEQE", - "output": "cytoplasm ; exodeoxyribonuclease VII complex ; exodeoxyribonuclease VII activity ; DNA catabolic process" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MKILLIGPPGSGKGSVSELLTKNNTLKHVSTGNLFRAILKEDSELARKIKEINVSGGKLVPDEITNQVAKSAIDELIKNEQSFILDGYPRTINQALALEQYCNLDYIFYLDIDHQELMKRLTGRWMCPKCAGIYNIHFKKPQVHGLCDNDQATLYQRADDHADAVSIRLDEYDKLTLPLIKHYETNPRFIKINANQPIEDVYKNINNYLKQNK", - "output": "cytoplasm ; intracellular membrane-bounded organelle ; adenylate kinase activity ; ATP binding ; zinc ion binding ; AMP salvage ; phosphorylation" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MATYVIGDLQGCLTPLVQLLEQINYHPEQDKLWFAGDLINRGEESLETLRFIKSLGNNATVVLGNHDLHLLAVSHGYGKLKRGDTLAEILTAGDRDDLMDWLRHQPLFHYDEQLNTVMTHAGIPPCWDLQKAQTLAKEVEDKLKSDSVDEFFATMYGNKPNTWSDDLTGLDRLRAITNYLTRMRFCDENSKLDLESKEGINTATKGYAPWFNYPTKVPEDCHIVFGHWAALEGKTQKERIHALDTGCVWGGSLTALRLEDQQRFSTPCSINRKNP", - "output": "bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MEKLLHWTIAQQSGDKAALEKIGEPDQKALNQLFGGPDEATLMKESIKVVESTDVSLEDKEIALENFEMLIENLDNANNIGNLKLWNPLIDILAKEDTPVELKVLICGIIGTAVQNNPKSQEDFNETEGLSELIELAQDDKKFELQSKALFAISSFIRNFQPGYAKFEKLQGLKLINFDNKNNKYQLRILSLISSILSNGLDDSLKAQFKEAKLPHYLASVLNEDSNTSLVDKSLNIVSQLNQLNYEFSLEEKYEINRGIQVVEGLSEKLNIDDLNNAKQATSS", - "output": "cytosol ; endoplasmic reticulum ; adenyl-nucleotide exchange factor activity ; cytoplasm protein quality control by the ubiquitin-proteasome system ; regulation of translation" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MRLIPLKAAAQVGKWAAAHIVKRINEFQPTAERPFVLGLPTGGTPLATYKALIEMHKAGEVSFKHVVTFNMDEYVGLAADHPESYRSFMYNNFFNHIDIQEENINLLNGNTDDHEAECKRYEDKIKSYGKINLFMGGVGNDGHIAFNEPASSLSSRTRIKTLTEDTRIANSRFFDGDINQVPKYALTIGVGTLLDAQEIMILVTGHNKALALQAAVEGSVNHLWTVSALQLHPKAVIVCDEPSTQELKVKTVKYFTELEAKNIVGF", - "output": "glucosamine-6-phosphate deaminase activity ; carbohydrate metabolic process ; N-acetylglucosamine metabolic process ; N-acetylneuraminate catabolic process" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MPQQNYLDELTPGFTPLLAIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCPTEKLCQRGCTRSGIDKPIDIARLQRFITDFEQQTAMQIYQPGSKTRGKVAIIGAGPAGLQASVTLTHLGYDVTIYEKQPQPGGWLRHGIPAFRLPQSVLDQEIARIVEMGVNIKCNCDVGGSLSLAQLKAEYRAVLMTVGMSCGSDLPLFEQASHVEIAVDFLQRARQADGDISVPRSALIIGGGDVAMDVASTLKILGCPSVTCVAREELAEFPASEKEFTSTQALGVSIIDGFTPVAVSGNKVTFHHVRHSGELTLEAENIILAVGQHARLDNFAEIKAQHNIIDTHNYQTDDPAIFAAGDIVKGDKTVVYAVKTGKEAAQAIHHYLEEACSC", - "output": "dihydropyrimidine dehydrogenase (NAD+) activity ; iron-sulfur cluster binding ; NADH dehydrogenase activity ; pyrimidine nucleobase catabolic process" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MSYLIPYVIEQTNRGERSYDIYSRLLKDRIVFLGTPIDDQVANVVIAQLLFLESEDPDKPVNLYINSPGGSVSAGLGIYDAMQHIKSPVNTTVVGMAASMAALLLAAGTGKRYALPNARVMIHQPHLSGVGGQVTDIEITAREAVKTKQLMAEILAKHSGQSVERILADTERDRWMSAQEAVEYGLVDEVLHPREKASRSAR", - "output": "cytoplasm ; ATP-dependent peptidase activity ; serine-type endopeptidase activity ; proteolysis" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MTKEQIIEAVKSMTVLELNDLVKAIEEEFGVTAAAPVAVAGGAGEAAAEKTEFDVELTSAGAQKIKVIKVVREITGLGLKEAKELVDNTPKVIKEAAAKEEAEEIKAKLEEVGAAVEVK", - "output": "ribonucleoprotein complex ; ribosome ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MELFHHIKSVRDALGKARAAGKTVGFVPTMGNLHNAHLALVQQAKQHCDVVIVSIFVNRLQFGLNEDWDKYPRTLQDDAAKLREIGCDYLFCPEEGEVYPNGMDAQTRVIVPSMANVLCGASRPGHFEGVTTVVTKLFNIVQPDIAVFGIKDYQQLAIIRRMVEDLCIPVEIMAGDIVREADGLAMSSRNGFITAQERPRANQLNQSLNWVKQAILDGRRDFDVLESEAKKQIETAGFRPDYLSISNSKTLEPAANDDTDITVLGAMYTEAARLIDNVSLSVVN", - "output": "cytoplasm ; ATP binding ; pantoate-beta-alanine ligase activity ; pantothenate biosynthetic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MWRLIIIAILFQGLVNSAMLERRKRGVDPETAMNISEIILFRGYPSEEYEVVTGDGYILCLNRIPYGKISQKTKEPKPAVFLQHGLLADGSNWVTNLDYNSLGFALADAGFDVWLGNSRGNTWSQKHINYTIKQKEFWMFSFNEMAMYDIPASVNFVLNKTGQEQLFYVGHSQGTTIGFIAFSVLPELAKKIKMFFGLAPVMTVKFSSGGLVKLGELPEFLLKEIFGTKQIFPQNAVIKWLATHVCGQVLIDELCGNFFFLLCGFNEKNLNMSRVEIYSTHCPAGTSVQNMLHWSQAVKSGEVRAFDWGSRKENMAHYKQPTPPPYKMERMLVPTALWTGGHDWLSDRKDIAILLTLIPNLIYHKEIPEWEHLDFIWGLDAPQRMFRDMIQMMHKVQYAH", - "output": "extracellular region ; sterol esterase activity ; lipid catabolic process" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MPDRLVPATLARRDDGILVSPEYGELPRDASRARAHANRMLAGTGLLARWQGRRTFTIVETGFGTGGRFLATWAAWRDDPARCERLHFVAIEAHPFTREDLRRAVSHLVADTTISENADALIDAWPMHVPGLHRLEFDAGRVVLTLAFGDARDMLQRLVARADAFYLGNVASAAHGDVLSADVIRALARIAADGATYATHSHDDTVKHALEQTGFTSRDVEDCAGEPALRVGEYAPRWRMRRHEPPRALPVAAREAIVIGAGLAGCAVVERLAARGWNITLIERHERIASEASGNPAGVFHPLMTRDDNVASRLTRSGFLHALARWRALEDAGHAFARSTRGMIHLAESADDFARMRDAFDALGAPSDYVSLLDTDAARAHLNLPVAHGGLLFPHGGAVWPAGVCAAQIAAAGERVTLLAGTEVARLERDRDIWRAVDAAGATLAEAPVVVLANAGDAVRLAGLRHVALQPVRGQLTLLPPGSTAPLPCPTIGDGYAVPLDDGTLLIGATFEPDDVDRTMRTVGHIENLARVRHLLPGLIGELPDVDTLRGRVAFRWVVADRVPVIGPLADEAQAVANARALSGAKARDLPRTAGLYGAFGYGSRGLVWAALGAELIASQLEGEPLPLERELVDAVDPARFLIRALRGRQIG", - "output": "cytoplasm ; flavin adenine dinucleotide binding ; oxidoreductase activity, acting on the CH-NH group of donors ; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity ; tRNA wobble base modification" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MSAFTKIGLLGKADDRGTQLTLETITTALIHRGFALCLEARTAEQLNLPEEVETLSLPDLGEWAEIAIVVGGDGNMLGAARALCEYDIGVIGVNRGNLGFLTDLDPDEVMTPLLSVLNGNYHVEERFLLSAEVINNGSSSGTGRAINEIVLHSDKVAHMIEFELYVNDHFVFSQRSDGLICATPTGSTAYSLSGGGPILHPGLDAMTLVTMFPHTLSSRPIVVDGNSEVRLKAAFDNDLLQISCDGHVRMTVHPGDDVIIKKYPKALRMIHPIDHNYYHVLRNKLGWGSRLF", - "output": "cytoplasm ; ATP binding ; metal ion binding ; NAD binding ; NAD+ kinase activity ; NAD metabolic process ; NADP biosynthetic process ; phosphorylation" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MVQIVISSTGAEGLAEWVLMELQGEIEARYSTGLAGNLLGDLHYTTEGIPVLIVGHHILYGKTIHLEKPFAVLVKHTPGKQDCDEPGRGTGTQYLVTALIKNKILFKTRPKPIITNVPKKV", - "output": "Ctf18 RFC-like complex ; nucleoplasm ; DNA binding ; DNA clamp loader activity ; single-stranded DNA helicase activity ; DNA replication ; mitotic sister chromatid cohesion ; positive regulation of DNA-directed DNA polymerase activity" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MTDQPNNDAVANEENGPQFSLQRIYVRDLSFEAPKSPAIFRQEWTPTVSLDLNTRQKQLEGDFYEVVLTLSVTVNNGDEVAFIVEVQQAGIFLIKGLDDGAMSHTLGAFCPNILFPYAREAIDNLVVRGSFPALMLAPVNFDALYAQELQRMQEAGETPTVQ", - "output": "cytoplasm ; unfolded protein binding ; protein folding ; protein tetramerization ; protein transport" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MTERVQVGGLQVAKVLFDFVNNEAIPGTGVSADTFWTGAEAVINDLAPKNKALLAKRDELQAKIDGWHQARAGQAHDAVAYKAFLEEIGYLLPEAEDFQAGTQNVDDEIARMAGPQLVVPVMNARFALNASNARWGSLYDALYGTDVISEEGGAEKGKGYNKVRGDKVIAFARAFLDEAAPLESGSHVDATSYSVKNGALVVALKNGSETGLKNAGQFLAFQGDAAKPQAVLLKHNGLHFEIQIDPSSPVGQTDAAGVKDVLMEAALTTIMDCEDSVAAVDADDKVVIYRNWLGLMKGDLAEEVSKGGSTFTRTMNPDRVYTRADGSELTLHGRSLLFVRNVGHLMTNDAILDKDGNEVPEGIQDGLFTSLIAIHDLNGNTSRKNSRTGSVYIVKPKMHGPEEAAFTNELFGRVEDVLGLPRNTLKVGIMDEERRTTVNLKACIKAAKDRVVFINTGFLDRTGDEIHTSMEAGAVVRKGAMKSEKWIGAYENNNVDVGLATGLQGKAQIGKGMWAMPDLMAAMLEQKIGHPLAGANTAWVPSPTAATLHALHYHKVDVFARQAELAKRTPASVDDILTIPLAPNTNWTAEEIKNEVDNNAQGILGYVVRWIDQGVGCSKVPDINDVGLMEDRATLRISSQLLANWLRHGVISQEQVVESLKRMAVVVDRQNASDPSYRPMAPNFDDNVAFQAALELVVEGTRQPNGYTEPVLHRRRREFKAKNGL", - "output": "cytosol ; magnesium ion binding ; malate synthase activity ; glyoxylate catabolic process ; glyoxylate cycle ; tricarboxylic acid cycle" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MTGGKWQDRVKSVEQRASSFQSSPLSCPYKPRLSQPWQPSSIWRLFPRQNAAIAFAQHIKQDVHIFSLEKEGSDAGQRIFLVTSYSELWHYYSTHRHSLMHCYEVILEGAVCKLYFDLEFHKASNKNLDGKMMVAKLIQYVCEKLEEVYGLHCSAKDVLDLDSSTSDKFSHHLIFMLPNAAFKDNSHVGRFIHDILHPALTNLKKSNPEAPGENRDDVEGTQAKRRKTEENDLGFLTVKNEKGQEQLFVDLGVYTKNRNFRLYKSSKLGKNAAFIVAEDNKFVPNPSKQITKDERIFLASLITNVSFTGQRILTYDMTQKSTAGSECPTLERESHSSDLLGDQKTSPFKEVDEFVLTLVCKDGIQGSIRRWNYFACEQLLVYDIEKFRWCHNVKRFHKSNNIIIVVDLKEEVWYQKCHDPECRRQNYRSSSFPLPQEVCMSHLLMEDEEDQAYLTDELGNIELAVTAPAESTSTTPSEDTEGWGDWPDDPAYLRALQEVEEEEEDEDEEVPDELLLQAVNECE", - "output": "DNA-directed RNA polymerase complex ; mitochondrial matrix ; nucleus ; replication fork ; chromatin binding ; DNA primase activity ; DNA-directed DNA polymerase activity ; manganese ion binding ; zinc ion binding ; error-prone translesion synthesis ; mitochondrial DNA repair ; mitochondrial DNA replication ; R-loop processing ; replication fork processing ; response to UV ; translesion synthesis" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MKNWIVGMVALVTMVPVMAATPWQKITHPVAGSPQSIGGFANGCVIGAQPLPLESADYQVMRSDQRRYFGHPDLLNFIHRLSAQTHQQQLGTVLIGDMAMPAGGRFSSGHASHQSGLDVDIWLQLPKQRWSQQQLLKPQPIDLVAVDGKRVIPALWQPQIESLIKLAAKDNDVTRIFVNPAIKKQLCLDAGADRQWLHKVRPWFAHRAHMHVRLRCPANSLECVDQDTPPPGDGCGAELESWFQPPPPSAKPGKTLPPPLPPSCQALLDNHFATE", - "output": "outer membrane-bounded periplasmic space ; metal ion binding ; metalloendopeptidase activity ; serine-type endopeptidase activity ; peptidoglycan metabolic process ; proteolysis" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MSHIPVLLKETINALNIKKNGIYIDGTFGNGGHTKEILKYLGQSGKLYSIDQDIKSVNKGKKIKDKRFSIIFGKFSKKIPYIYKKNKKKKIDGILLDLGISSNQINQNDRGFSFMKNGLLDMRMNNTTGIPAWKWLKKSSQKEIEKVLRKYGEERYSKKISYAIYNRNKKKTITQTLDLVQIIKKAIPKIDKYKHPATRTFQAIRIHINNEIKELKKTLKISIKILKKKRRLVIICFHSLENRIVKNFFKKHGKTFFIPRGLPITEKKIKKIENKKIKIIKKIKPKKTEIQKNKRSRSAILRIAEML", - "output": "cytoplasm ; rRNA (cytosine-N4-)-methyltransferase activity ; rRNA base methylation" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MEKREFKAESKRLLDIVINSIYTNREIFLRELISNASDAIDKVYYKTLGDSSLTFNKDDYYIKIKPNKEERTLTISDKGIGMTEKELDENLGVIAKSGSLQFKKENEIKDGFDIIGQFGVGFYSGFLVADKITVITKAFGADKAYKWESDGVDGYTISEAEKDSFGTDIILHLKANDEDENYDEFLEEYKLKSLIKKYSDFIRYPIKLDVTKSRVKEGTENEHEEYVEEETVNSMVPLWRRNKNELTDDDYNNFYVEKRFGFDKPLRHMHISVDGMISYNSILYIPENIPYDYYTKEYEKGLELYSNGVLIMEKCSELLPDYFGFVKGIVDSQDLSLNISREMLQHDRQLSRIAKNIKTKIKNELESMMKNDRESYEKFYKSFGRQLKYGVYDDFGMNKDELKDLLMFYSSKEKKMVSLAEYVERMAEDQKYIYYAVGESNERIEKMPQTEMVLDKGYEILYFTEDVDEFAIKMLMNYKEKEFKSVSSGDLGIESEEENKKENEENKGIFEAMKEALGEKISAVKASSRLKNYPVCLSSEGEVSIEMEKILSAMPNNQGVKAQKVLEVNTNHEVFNSLKDALENDKDKFNLYTKLLYNQALLVEGLSIENPVDFTNDICKLMK", - "output": "cytoplasm ; ATP binding ; ATP hydrolysis activity ; ATP-dependent protein folding chaperone ; unfolded protein binding" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MNKLFRSLAFYMLILVISVAIAVQLGGTSQQTTQLVYSDLVRYIQQGEVRSITLSGAYAEGELVSGEKFTVQLPPSSSQAPLVEMLQQHPNIKLDFRQDNTSGIWAMLLQTLVPVVLVLLAFFFIMQQTQGSGNRVMQFGKSRARLVTDDRKRVTFDDVAGIDEVKEELAEIVDFLKHPKRYLELGARIPKGVLLYGPPGTGKTLLAKAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNSPCIVFIDEIDAVGRQRGAGYGGGHDEREQTLNQLLVEMDGFSANEGIIIIAATNRPDVLDPALLRPGRFDRQIVIDRPDLKGRLAIFQVHAKGKPLEPDVDLEVLAKRTPGFTGADIANLMNEAALLAARRRKKKISMQDVEDAIDRVLAGGPEKKSRVISEKEKRVTAYHEAGHAVVGHMLPHMDPLHKITIIPRGRAMGYTLFLPVEDRYNISKSEILDRMTMALGGRAAEEITFGEITSGAQDDIERTTQWARRMVTEWGMSEKLGPLTYGMKQDEVFLARDMTRLRNYSEEVAGLIDEEVRKFVHMAYQRAIDILTEHRDALEKVSEVLLEKETLEGKELQDLLEQLLPPRPKPEPLKPRMVGGGTSQVAPAF", - "output": "plasma membrane ; ATP binding ; ATP hydrolysis activity ; ATP-dependent peptidase activity ; metalloendopeptidase activity ; zinc ion binding ; protein catabolic process ; proteolysis" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MSSYGGGGYSSRGGGGGYSGGYDRNGGGGGGYSGSNGYSGGGGGYGGGGYGGGGGGYGGGGGGYGGGYGGGGGDRMSNLGAGLQKQNWDLDTLPKFEKSFYQEHPNVAARSQAEVDKFRRDHAMTVAGNNVPSPVETFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPGDGPIVLVLAPTRELAVQIQQEITKFGKSSRIRNTCVYGGVPKGPQTRDLSRGVEVCIATPGRLIDMLESGRTNLRRVTYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQTCMWSATWPKEVRALASDFLTDFIQVNIGSMDLAANHRITQVVEVVNESEKRDKMIKHLEKIMEDKESQNKILIFTGTKRVADEITRFLRQDGWPALSIHGDKQQNERDWVLDQFKTGKSPIMVATDVASRGIDVRNITHVLNYDYPNNSEDYIHRIGRTGRAGAKGTAITFFTTDNSKQARDLVGVLQEAKQHIDPRLAEMVRYGGGGGNSRYGGYRGRGGGGFRGGRSQGANGPNAMPMGNRRW", - "output": "cytoplasm ; nucleus ; ATP binding ; ATP hydrolysis activity ; RNA binding ; RNA helicase activity ; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay ; rRNA processing" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MIDTTLPLTDIHRHLDGNIRPQTILELGRQYNISLPAQSLETLIPHVQVIANEPDLVSFLTKLDWGVKVLASLDACRRVAFENIEDAARNGLHYVELRFSPGYMAMAHKLPVAGVVEAVIDGVREGCRTFGVQAKLIGIMSRTFGEAACQQELEAFLAHRDQITALDLAGDELGFPGSLFLSHFNLARDAGWHITVHAGEAAGPESIWQAIRELGAERIGHGVKAIEDRALMDFLAEQQIGIESCLTSNIQTSTVAELAAHPLKTFLEHGIRAGINTDDPGVQGVDIIHEYTVAAPAAGLSREQIRQAQINGLEMAFLSAEEKRALREKVAAK", - "output": "2'-deoxyadenosine deaminase activity ; adenosine deaminase activity ; zinc ion binding ; nucleotide metabolic process ; purine ribonucleoside monophosphate biosynthetic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MKQPSALSALVEALRVLPGVGPKSAQRMAVHLMQHDREGAERLGRSLLFATEHLQHCEKCNTFTEAQICEVCSDEERDPTLLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGIGPKEIHFDRLVRRASDGVVKEVVLATNFTNEGEATAHYLGQTLKARGLAVTRLARGVPVGGELEYVDAGTIARAMLDRRTM", - "output": "DNA binding ; metal ion binding ; DNA recombination ; DNA repair" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MTDDMDKVWPTGLTLAEAEEVHKQLIDGTRVFGAIALFAHFLAAIATPWLG", - "output": "plasma membrane ; plasma membrane light-harvesting complex ; bacteriochlorophyll binding ; electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity ; metal ion binding ; photosynthesis, light reaction" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MAKGQSLQDPFLNALRRERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAISTVVPSRPVSHHSNNAGGGASNNYHHGSNAQGSTAQQDSEETE", - "output": "RNA binding ; regulation of DNA-templated transcription" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MGYGTRKLSDEYEVSEILGRGGFSVVRKGTKKSSIEEEKSQSQVAIKTLRRLGASNNPSGLPRKKDIGEKSTIGFPTMRQVSVSDTLLTNEILVMRRIVENVSPHPNVIDLYDVYEDTNGVHLVLELCSGGELFDRIVAQDKYSETEAATVVHQIASGLEAVHRANIVHRDLKPENCLFLDVRKDSPLKIMDFGLSSVEEFTDPVVGLFGSIDYVSPEALSQGKITTKSDMWSLGVILYILLSGYPPFIAQNNRQKQQMIMNGNFSFYEKTWKGISQPAKNLISSLLTVDPSKRPSALELLSDPWVKGEKAKDVQMDPEIVSRLQSFNARRKLRAAAIASVWSSTIFLRTKKLKSLVGSYDLKEEEIENLRMHFKKICADRDNATLSEFEEVLKAMNMLSLIPFASRIFDLFDNNRDGTVDMREILCGFSSLKNSKGEDALRLCFQMYDTDRSGCISKEEVASMLRALPYDCLPTDITEPGKLDEIFDLMDANNDGKVTFDEFKAAMQRDSSLQDVVLSSIRP", - "output": "cytoplasm ; nucleus ; ATP binding ; calcium ion binding ; calcium-dependent protein serine/threonine kinase activity ; calmodulin binding ; calmodulin-dependent protein kinase activity ; protein serine kinase activity ; intracellular signal transduction ; nodulation ; peptidyl-serine phosphorylation ; protein autophosphorylation" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MTGSKMLFACLALIAFLHPLVHVASAQECTTPNNKAGKCLGIRVCKPLLEMLQTQGHAAADFLRQSVCKYENNNPIVCCPNEESREDRGILVGNEYEPLRPPHCGFSNVSHTRVVGGKPAVLGAWPWIAALGFRYPRNPALEPLWKCGGSLISSRHVLTAAHCAEINELYVVRIGDLNLVRNDDGAHPVQIEIESKIIHPDYISGVTKHDIAILKLVEEVPFSEYVYPICLPVEDNLRNNNFERYYPFVAGWGSLAHHGPGSDDLMEVQVPVISNTECKNSYARFAAAHVTDTVLCAGYTQGGKDACQGDSGGPLMLPKKFTFYQIGVVSYGHKCAAAGYPGVYTRVTSYLDDFILPAMQ", - "output": "extracellular region ; metal ion binding ; peptidase activator activity ; serine-type endopeptidase activity ; toxin activity ; positive regulation of peptidase activity ; proteolysis" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MGQCRSANAEDAQEFSDVERAIETLIKNFHQYSVEGGKETLTPSELRDLVTQQLPHLMPSNCGLEEKIANLGSCNDSKLEFRSFWELIGEAAKSVKLERPVRGH", - "output": "extracellular exosome ; extracellular space ; perinuclear region of cytoplasm ; calcium ion binding ; chemokine receptor binding ; apoptotic process ; calcium ion homeostasis ; defense response to bacterium ; positive regulation of granulocyte chemotaxis ; positive regulation of monocyte chemotaxis ; response to lipopolysaccharide ; toll-like receptor 4 signaling pathway" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MTNYTAINYLLYLLSKRDYSEQDLRRKLVQKEYSQEEIEQAIERAQANNWQSDERYCAGFIRYRSQQGIGPRRLKQELKLKGIKDWLINQELENAEIDWFILAEQVFEKKRPQVWDIKAKQKMWRFMLSRGFYNDHFSHLMDIDYNDTEYE", - "output": "cytoplasm ; regulation of DNA repair" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MGSTCSTPESKEQKRINSVIDKQIRKDEDDEIGNQKLLLLGTGECGKSTILKQINILHSSGFSKADLKNVAGTVYSNIIQGVATLLKAKDHFYYELSTPELDADAQHILSLADSSKDAMPFIPLTFNAIKRLWHDPVVQKTFERRAEFQMMDTLVYFMNELDRINNADYIPTVDDMLRIRIPTMGVVQQTIEIKGTKFRIYDVGGQRSERRKWIHLFDNVNATIFISAINEFNQKLNEDGQTNRMKESIKLFETICNSRWFVQAAMILFLNKRDLFEQKLKTTSINVLFSTYQGSNDYAECVAYIQMRFERLNKYSDIKKIYTHVTCATDTNQIQLVIDSVVDMVIGRNLRGTGME", - "output": "heterotrimeric G-protein complex ; non-motile cilium ; G protein-coupled receptor binding ; G-protein beta/gamma-subunit complex binding ; GTP binding ; GTPase activity ; metal ion binding ; adenylate cyclase-modulating G protein-coupled receptor signaling pathway" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MDHFLKLLPKLTPQLRKGDCGKIAVIGGSLEYTGAPYYAASSVSRLGADLIHVFCAPDAAPVIKGYSPDLIVHPGMNASSILPKLNRMDAIVVGPGLGRNPTLWPLLQEIFNFVKNEKVPFVIDGDGLWFVSEHIEHFPRQMVTTVLTPNIVEFSRLCKSALGEEDVLNVKSSSQLQHLAAELSRKMDVTIYMKGEVDLVVTPNGEVSKCSTDSSLRRCGGQGDVTAGSLGLFLYWAKKNLGDDWTSAHHEAGISSSWLVRTAGRRAFEKHGRSMNTPLLLDEIPKLVRDVETREMKDTVHSDSSKH", - "output": "ATP binding ; ATP-dependent NAD(P)H-hydrate dehydratase activity ; metabolite repair ; nicotinamide nucleotide metabolic process" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MRLQRNSIICALVFLVSFVLGDVNIVSPSSKATFSPSGGTVSVPVEWMDNGAYPSLSKISTFTFSLCTGPNNNIDCVAVLASKITPSELTQDDKVYSYTAEFASTLTGNGQYYIQVFAQVDGQGYTIHYTPRFQLTSMGGVTAYTYSATTEPTPQTSIQTTTTNNAQATTIDSRSFTVPYTKQTGTSRFAPMQMQPNTKVTATTWTRKFATSAVTYYSTFGSLPEQATTITPGWSYTISSGVNYATPASMPSDNGGWYKPSKRLSLSARKINMRKV", - "output": "extracellular region ; fungal-type vacuole ; (1->6)-beta-D-glucan biosynthetic process ; (1->6)-beta-D-glucan metabolic process ; cell wall biogenesis ; fungal-type cell wall organization" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MRLLLTNDDGIMAEGIQVLAKHFEKDNEVIIAAPDVQRSGSGHCITTVPGELIIQEVKLEGINSKAYSITGTPADCARLGVRKLGNNQIDMVISGINNGFNLGIDSLYSGTVSAAIEAAICETPSIAVSLDTKGGNYDYNIAAEYALEVFSIYKDKYKNKDENVVLSLNVPCLPREKIKGLKVCRVGFKYHLQEIYDKGEKTEELSYNYTDIYYVKRGYAALSPLHYDLTNYKILGDINNLFTEK", - "output": "cytoplasm ; metal ion binding ; nucleotide binding ; XMP 5'-nucleosidase activity" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MAGVEQREGAIQVQGQSLFFREALPGGGQAARFSVLLLHGIRFSSETWQNLGTLHRLAQAGYRAVAIDLPGLGRSKEAKAPAPIGELVPSSFLAAVVDALDLGPPVVISPSLSGMYSLPFLTAPGSQLRGYVPVAPICTDKINAADYARVKASVLIVYGDQDPMGQTSFEHLKQLPNHRVLVMEGAGHPCYLDKPEEWHTGLLDFLQGLA", - "output": "cytoplasm ; cytosol ; nucleolus ; nucleoplasm ; acyltransferase activity ; hydrolase activity ; positive regulation of transcription by RNA polymerase II" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MALTADVKDELTKVEVSKTTVRAAELATILRFSGGLHLIGGRIAVESELDTPELARRVRKDLAELYGVRGVVSVISTSGVRRASQYLVRVLDGGETLARQTGLLDAHRRPIRGLPNRLTTGSREELAAVWRGAFLASGSLTDPGRSAALEVTCPGNEAAMALVGAAGRIGVAAKAREVRGVHRVVIRDGEAISAMLVQMGAAQTVSNWEELRQRREVRATANRLVNFDDANLRRSAQAAVAACARVERALEILGDDIPEHLQYAGRLRLAHRDASLDELGHYADPPMTKDAVAGRIRRLLAMADKRASDLGVPSTEASLPADFDEV", - "output": "DNA binding ; cell cycle ; cell division ; regulation of sporulation" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MADDRVAGGATPPPPPPPPPLDASAFTHTPYYCEENVHLLCKELIRSGISDPAGTNLYAVFISNEEKKVPLWYQKASHSGDGFVLWDYHVICIQSRRKNGEVLDLVWDLDSSLPFPCSFIQYVSDAIRPLSFGNSTYRRLFRVIHAPVFLRSFASDRSHMKDHAGNWIQLPPKYESIVAEDGTTNNLNEYITMSMDDVKDLESMADDVYSSKHGVVINETILPEFFSRLPG", - "output": "cytosol ; nucleus ; protein-N-terminal asparagine amidohydrolase activity ; protein-N-terminal glutamine amidohydrolase activity ; defense response to bacterium ; positive regulation of camalexin biosynthetic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MNLLSLLLILLGIILGVVGGYVVARNLLLQKQSQARQTAEDIVNQAHKEADNIKKEKLLEAKEENQILREQTEAELRERRSELQRQETRLLQKEENLERKSDLLDKKDEILEQKESKIEEKQQQVDAKESSVQTLIMKHEQELERISGLTQEEAINEQLQRVEEELSQDIAVLVKEKEKEAKEKVDKTAKELLATAVQRLAADHTSESTVSVVNLPNDEMKGRIIGREGRNIRTLETLTGIDLIIDDTPEAVILSGFDPIRREIARTALVNLVSDGRIHPGRIEDMVEKARKEVDYIIREAGEQATFEVNAHNMHPDLVKIVGRLNYRTSYGQNVLKHSIEVAHLASMLAAELGEDETLAKRAGLLHDVGKAIDHEVEGSHVEIGVELAKKYGENETVINAIHSHHGDVEPTSIISILVAAADALSAARPGARKETLENYIRRLERLETLSESYDGVEKAFAIQAGREIRVIVSPEEIDDLKSYRLARDIKNQIEDELQYPGHIKVTVVRETRAVEYAK", - "output": "plasma membrane ; RNA binding ; RNA endonuclease activity ; mRNA catabolic process" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MQNIHFIGIGGIGISALARFLKEKGFKISGSDLKESKITKELEKEGVKVSIPHHKDNILNKDLVIYSAAIKEENPEFKYAKELGIKCLSRKEALPLILEDKRVFAVAGAHGKSTTSSILASLLDDASVIIGAILKEFGSNMIYKESQNLIFEADESDSSFLNSNPYLAIVTNAEAEHLDHYGNEVSKLHHAYAEFLDTAKIRVINAEDEFLKNYKNESIKLYPSKDIKNCTMCIENFKPFTSFELKDLGEFKIFGMGYHLALDASLAILAALNFLDIETIGARLKNYQGIKKRFDILHADENLVLIDDYGHHPTEIKATLSAAQEYAKLGGYKKITAIFEPHRYTRLAVNLKEFAKAFEGVDELVILPVYAAGEEPIEIDLKAVFPKALFVENIQREGKFLVASKGQVFEEGLIIGFGAGDISNKLRQKNE", - "output": "cytoplasm ; ATP binding ; UDP-N-acetylmuramate-L-alanine ligase activity ; cell cycle ; cell division ; cell wall organization ; peptidoglycan biosynthetic process ; regulation of cell shape" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "METKDLKKLAKAELHCHLDGSLSLDTIRQLAALAQVDVPQDDSELKQLVTAPETCGSLMDYLKTFDFIRPLLQTPQALTLAAYDVVKQAALENVIYIEIRFAPELSMDQGLTATQVVEAVLKGLEQGQKEFGIVAKAIVCGMRQSSLDISREIFANVLEWANKGLVGFDFAGNELDFPPAVLADLIKETQAYGLPFTLHAGECGCPNYIVDAIDLGIKRLGHVTAIHNQKDLLAKFIANDVTAELCFTSNLQTKAARTVEDFPYMQLRQAGAKLSINTDNRTVSDTNLTKEYELFVKHFETSVSDFLEHNRDAIKASFTSPAEKEALLARLDKAYQSYIKK", - "output": "2'-deoxyadenosine deaminase activity ; adenosine deaminase activity ; zinc ion binding ; nucleotide metabolic process ; purine ribonucleoside monophosphate biosynthetic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MNVKIDGRRKINSNVIVPPDKSISHRSIMIGSLANGVTEIENFLFSDDCLATINCFKNLSTDIEIRNDKIIVKGNGFALSAPKQILDCQNSGTTTRLLLGILSTQEFESILTGDSSLKKRPMKRVTVPLSQMGAEFEFLEKEDFLPIKVKGSKKLKPIEYTLPIPSAQVKSALIFASLKAEGKSVIKESPKSRDHTELMLKHAGANIKSWEKDGVYTVEILPSQISSIKIKIPSDISSAAFFIVLALICEGSSVVIENCILNPTRTGIIDVLKQMGAEIKIEDVENRNGELVGKIVARSSNLRGVKVEKNDIPRIIDEIPILAVAAAFAEGKTIIDHASELRVKESDRIKTTVEMLKSFGAECYELENGLEIIGSREKLKSAVVNSYKDHRIAMAASIMACAVEGESTILDADCVSISFPNFYDILFSSTKKI", - "output": "cytoplasm ; 3-phosphoshikimate 1-carboxyvinyltransferase activity ; amino acid biosynthetic process ; aromatic amino acid family biosynthetic process ; chorismate biosynthetic process" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MKVEEILEKALELVIPDEEEVRKGREAEEELRRRLDELGVEYVFVGSYARNTWLKGSLEIDVFLLFPEEFSKEELRERGLEIGKAVLDSYEIRYAEHPYVHGVVKGVEVDVVPCYKLKEPKNIKSAVDRTPFHHKWLEGRIKGKENEVRLLKGFLKANGIYGAEYKVRGFSGYLCELLIVFYGSFLETVKNARRWTRRTVIDVAKGEVRKGEEFFVVDPVDEKRNVAANLSLDNLARFVHLCREFMEAPSLGFFKPKHPLEIEPERLRKIVEERGTAVFAVKFRKPDIVDDNLYPQLERASRKIFEFLERENFMPLRSAFKASEEFCYLLFECQIKEISRVFRRMGPQFEDERNVKKFLSRNRAFRPFIENGRWWAFEMRKFTTPEEGVRSYASTHWHTLGKNVGESIREYFEIISGEKLFKEPVTAELCEMMGVKD", - "output": "ATP binding ; CCA tRNA nucleotidyltransferase activity ; magnesium ion binding ; tRNA binding ; RNA repair ; tRNA 3'-terminal CCA addition" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MNVIEGKMTQDGIKVGIVVARFNEFITSKLLGGAKDGLVRHDVPEENIDVAWVPGAFEIPLIAKKMAKSRKYDAIICLGAVIRGATSHYDYVCNEVSKGIASVSLESEIPVMFGVVTTENIEQAIERAGTKAGNKGYDCALGAIEMINLVRQIG", - "output": "riboflavin synthase complex ; 6,7-dimethyl-8-ribityllumazine synthase activity ; riboflavin biosynthetic process" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MTNMWTLLLLPFFAMLQVHYAWCWSPQDRVLLRDIQTITLYADRYTNARRSAPVPQLKCIGGNAGCHAMVPQVVQCHNRGWDGLDVQWECRVDMDNSYRFGKVEVSCEGFDFPEDPYVLRGSCGLEYTLELTEEGRKRTQDGYRSAGFGSGYFQSNSQSWDSKTDGSSAIVLIFIVILAYGVYKLFLSGPSVQQHPRPDEYGYDHQSQTHSSAPPPGFKSDFTGFSSGYGTGHVNQGPGFWTGLGTGGVLGYLFGNRRAQPYQSPYFNTWTGPSHSESMHQNDRPPQSSGVRTASGFGGTKRR", - "output": "endoplasmic reticulum membrane ; endoplasmic reticulum-plasma membrane contact site ; calcium ion transport ; regulation of store-operated calcium entry" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MSITLSTLLDLKKKSEKFAVMTAYDATFAYEMDQAGVEVILVGDSLGMVLQGHDSTIPVRLEDMVYHTASVRRGARNAFIIADMPFMSYGTPDQAMAGAKQLMQAGAHMVKLEGGAWLCDAIAHLSRQGVPICAHLGLTPQSVNKFGGYKVQGKEASQAQLMLDDAKALEQAGADILLLECVPTKLAKQLTEEACAPVVGIGAGPYTDGQVLVMHDLLGVGAGKKPKFVKNFLAGSDSIQAAFKGYVEAVKSGAFPAEEHSFNI", - "output": "cytoplasm ; 3-methyl-2-oxobutanoate hydroxymethyltransferase activity ; metal ion binding ; pantothenate biosynthetic process" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MALAKRIIPCLDVKDGRVVKGVNFIGLRDAGDPVEAAKRYNGEGADELTFLDITASSDNRDTILHIIEEVAGQVFIPLTVGGGVRTVADIRRLLNAGADKVSINTAAVTRPDLIDEAAGFFGSQAIVAAVDAKAANPENTRWEIFTHGGRNPTGLDAVEWAVEMQKRGAGEILLTGMDRDGTKQGFNLPLTRAVAEAVDIPVIASGGVGNVRHLIEGITEGKADAVLAAGIFHFGEIAIREAKRAMREAGIEVRL", - "output": "cytoplasm ; imidazoleglycerol-phosphate synthase activity ; lyase activity ; histidine biosynthetic process" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MREIVHIQGGQCGNQIGAKFWEVVSDEHGIDPTGTYHGDSDLQLERINVYFNEATGGRYVPRAILMDLEPGTMDSVRSGPYGQIFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVVPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPTFGDLNHLISAVMSGITCCLRFPGQLNADLRKLAVNLIPFPRLHFFMVGFTPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASALFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMSATFIGNSTAIQEMFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDASAEEEGEFEGEEEEA", - "output": "cytoplasm ; microtubule ; GTP binding ; GTPase activity ; metal ion binding ; structural constituent of cytoskeleton ; microtubule-based process" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MSKALANMPGDDYFRHPPVFDTYAEHRAYLKFRHAVALRHFARLGFDQDGLAGLITVADPEHADTYWANPLAHPFSTITPADLIRVDGDSTETVDGQRRVNIAAFNIHAEIHRARPDVQAVIHLHTVYGRAFSAFARKLPPLTQDACPFFEDHEVFDDYTGLVLAKDDGRRIAKQLRGHKAILLKNHGLVTVGETLDAAAWWFTLLDTCCHVQLLADAAGGAEPIPAEVARLTGQQLGSHLLGWNSYQPLHEATLARNPDLAAMAPALPPQTPALAR", - "output": "metal ion binding ; oxidoreductase activity ; antibiotic biosynthetic process" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MATTKHLALAILVLLSIGMTTSARTLLGYGPGGGGGGGGGGEGGGGGYGGSGYGSGSGYGEGGGSGGAAGGGYGRGGGGGGGGGEGGGSGSGYGSGQGSGYGAGVGGAGGYGSGGGGGGGQGGGAGGYGQGSGYGSGYGSGAGGAHGGGYGSGGGGGGGGGQGGGSGSGSGSGYGSGSGGGNGHH", - "output": "extracellular region ; cell wall organization" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MAPNLQPQPQSQLQRPRLKDHRPWSGLSNISKRSFRSCATSAFEADDERSSSDGDMSPRNSEADLRRPVVPRHFGHDARPTSRRELLGWYAYAFAAETYVICGIASFIPILLETLARENGVLVSDRKTPCGSSDSKNDGDGQCIVWVFGMEINTASFAMYTFSVSVLVQALLVVSISCAADHGNYRKKLLLTFAWIGSFAVMSYIFITKDNYILGALLTVISNTSFGASFVLLNSFLPLLVRYHPDVIEANVATTPDLGSSEFESRPLDQSVGQLESSPVTATSPLLHPEDGGRLKPTASHAEITSKELELSTRISAIGIGTGYIAALFLQCICIGVLISLHNTTWGQRVVLFMVGVWWTVFTIPAAMWLRPRPGPPLADNGRKGIMAGLAYILYAWKSLFKTIQQARRLLDIVLFLAGWFLLSDAIATTSSTAILFAKTQLHMKPWALGMINVISTTAGVFGAFGWSWVSRLFNLKAHQTILVCIALFELIPLYGLLGYLPFVKNWGVFGLQQPWEMYPLAAVYGVVLGGLSGYCRSLYGELIPPGSEAAFYALYAITDKGSSVFGPTIVGAIIDRTGTIRPAFWFLAVLVGFPAPLIWFIDVERGRREGAKLAKSITDSIVQEEDESDDGAERRGMLSDYEREHGQSIDDERAGR", - "output": "vacuolar membrane ; amino acid transmembrane export from vacuole ; autophagy" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MKNINPTQTSAWQALQKHYDEMKDVTIAELFAKDSDRFAKFSATFDDLMLVDFSKNRITEETLAKLQDLAKETDLAGAIKSMFSGEKINRTEDRAVLHVALRNRSNTPIIVDDKDVMPEVNAVLEKMKTFSEAIISGQWKGYTGKAITDVVNIGIGGSDLGPFMVTEALRPYKNHLNMHFVSNVDGTHIAEVLKKVNPETTLFLVASKTFTTQETMTNAHSARDWFLKTAGDEKHVAKHFAALSTNAKAVGEFGIDTANMFEFWDWVGGRYSLWSAIGLSIILSVGFDNFVELLSGAHAMDKHFSTTPAEKNLPVLLALIGIWYNNFFGAETEAILPYDQYMHRFAAYFQQGNMESNGKYVDRNGNAVDYQTGPIIWGEPGTNGQHAFYQLIHQGTKMVPCDFIAPAITHNPLSDHHQKLLSNFFAQTEALAFGKSREVVEQEYRDQGKDPAQLEHVVPFKVFEGNRPTNSILLREITPYSLGALIALYEHKIFTQGAILNIFTFDQWGVELGKQLANRILPELGDDKAISSHDSSTNGLINRYKAWRA", - "output": "cytoplasm ; carbohydrate derivative binding ; glucose-6-phosphate isomerase activity ; carbohydrate derivative metabolic process ; gluconeogenesis ; glycolytic process" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MFKFGKKLMTVVLAASMSFGVFAATTGATDYWQNWTDGGGTVNAVNGSGGNYSVNWQNTGNFVVGKGWTYGTPNRVVNYNAGVFSPSGNGYLTFYGWTRNALIEYYVVDNWGTYRPTGTYKGTVNSDGGTYDIYTTMRYNQPSIDGYSTFPQYWSVRQSKRPIGVNSQITFQNHVNAWASKGMNLGSSWSYQVLATEGYQSSGSSNVTVW", - "output": "extracellular region ; endo-1,4-beta-xylanase activity ; xylan catabolic process" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MGLQGPAKVAIIGTGYVGSSTAFALLFSPLVKEMVLVDVNHAKAEGEAMDLAHAATLIRPVEVYAGRPADCAGSRIVIFTAGANQQPGQTRLDLIHRNTAIVRQALPEILHYCPEALVLMVANPVDILTYVAWKISGLPENRVLGSGTVLDSARFRHLLSRHYRVDPRNIHAYVIGEHGDTEVPVWSLANVAGVDLEEFYLMDGMREEEAFRVEISHQVREAAYEIIERKGVTSYGVALALSRIIECILRNEHSVLTISSVIRDLYGIDGEVALSLPCLVGNEGREKVLAIPLVAREKAALKHSATTLQQLIAQLSL", - "output": "cytoplasm ; L-lactate dehydrogenase activity ; glycolytic process" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MQLNDLRSAPGARREKHRPGRGIGSGLGKTGGRGHKGLTSRSGGKVAPGFEGGQQPLHRRLPKFGFVSLKAMDRAEVRTSELAKVEGDVVSLQTLKDANLINQHVQRVKVMLSGEVGRAVTLKGIAATKGARAAIEAAGGKFED", - "output": "large ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MSSNECFKCGRTGHWARECPTGIGRGRGMRSRGRAGFQFMSSSLPDICYRCGESGHLAKDCDLQEDKACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA", - "output": "cytoplasm ; endoplasmic reticulum ; nucleus ; DNA binding ; mRNA binding ; single-stranded RNA binding ; translation regulator activity ; zinc ion binding ; positive regulation of cytoplasmic translation" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MIKSKFIVIEGLEGAGKTNACICIKNLLKKNSIKNVLLVRQPGSTPIAEDIRRLIKKKFNDDNLIKETELLLMYAARIQLVEKKIKPALKNGIWVISDRHDLSSLAYQGGGLGIPKKIIYQLQSLFLNNFIPDLTIYLDVSPEIGLARALKRNPLDLIESRSLFFFKKTRRCYLEKSKLDKKTIIINANLNIKKVTQNITKKMLNWLNKQVI", - "output": "ATP binding ; thymidylate kinase activity ; dTDP biosynthetic process ; dTTP biosynthetic process ; phosphorylation" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MDFALPTTASQASAFMNNSSLTFPVLPNANNEATNETADSGDAEVSKNEGVSGIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKSTALIFASGKMVVLGGKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDVKFPIRLEGLAYSHGTFSSYEPELFPGLIYRMVKPKVVLLIFVSGKIVLTGAKVREEIYQAFEAIYPVLSEFRKH", - "output": "nucleus ; RNA polymerase I transcription regulator complex ; transcription factor TFIID complex ; transcription factor TFIIIB complex ; RNA polymerase I general transcription initiation factor activity ; RNA polymerase II core promoter sequence-specific DNA binding ; RNA polymerase II general transcription initiation factor activity ; RNA polymerase III general transcription initiation factor activity ; RNA polymerase III type 3 promoter sequence-specific DNA binding ; DNA-templated transcription initiation ; transcription initiation at RNA polymerase I promoter ; transcription initiation at RNA polymerase II promoter ; transcription initiation at RNA polymerase III promoter" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MSGEALDEIQWKSPEFIQERGLHTGNVLEYFSLSPFYDRTSNNQQLMMQFQFQQIQIPVNTTFQQFFQEKLREMTGVVFVIAYNREPDFWIIRKQLQLDPQNAVTLQDYYIIGANVYQAPKVYDVLSSRLLSSVLQLRNSIDLLNKMTQFHVSDGGHSYNNAIHQSTSNPTQGQSSGKSISATVGNTGTTATPMTMQTPQTVGPNGPATVQSGANSAAAISKNGSTSSAESADDRKNIYLDDIPLYGRGSTVEMLGLKVNLES", - "output": "mediator complex ; transcription coregulator activity ; regulation of transcription by RNA polymerase II" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MIKKRQTRIAMIAGEMSGDLLGAGVIRELKKHLKNVEFIGVGGPQMLEEGFQSLANMSELSVMGISDVLRRYPQLYFIRERLLKEWTINPPDVFIGIDYPDFNLSVETRLKRQNVKTVHLVSPKVWAWRQKRVYLIKKAVDLVLTLFPFEESFYQQYDVPAQFVGHPLADLIEINPNNADLRKKYNYKPDDTILAVLPGSRIGEIKYIGPLFLEVMQRIAVEMPHVHFIVPIACQELYPVFFKQFQARYSHLKIQIIQGNAREAMAISDVVLTKSGTATLEAMLLKRPMVVAFKWSKFTHAIIAPQVKIPYVALPNLLANKKLVPEFVQEKATANSITESVLNLLACPSQSNLNKQFTAIHHTLRQNANEKAALSILKILETSSA", - "output": "lipid-A-disaccharide synthase activity ; lipid A biosynthetic process" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MAAKGGTVKAASGFNAAEDAQTLRKAMKGLGTDEDAIINVLAYRSTAQRQEIRTAYKTTIGRDLMDDLKSELSGNFEQVILGMMTPTVLYDVQELRKAMKGAGTDEGCLIEILASRTPEEIRRINQTYQLQYGRSLEDDIRSDTSFMFQRVLVSLSAGGRDESNYLDDALMRQDAQDLYEAGEKKWGTDEVKFLTVLCSRNRNHLLHVFDEYKRIAQKDIEQSIKSETSGSFEDALLAIVKCMRNKSAYFAERLYKSMKGLGTDDDTLIRVMVSRAEIDMLDIRANFKRLYGKSLYSFIKGDTSGDYRKVLLILCGGDD", - "output": "apical plasma membrane ; cell surface ; chromaffin granule membrane ; cytoplasm ; cytosol ; membrane ; nuclear membrane ; nucleus ; perinuclear region of cytoplasm ; calcium ion binding ; calcium-dependent phospholipid binding ; calcium-dependent protein binding ; carbohydrate binding ; chondroitin sulfate binding ; heparin binding ; identical protein binding ; NF-kappaB binding ; epithelial cell differentiation ; negative regulation of interleukin-8 production ; negative regulation of NF-kappaB transcription factor activity ; Notch signaling pathway ; regulation of transcription by RNA polymerase II" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MIEVFLFGIVLGLIPITLAGLFVTAYLQYRRGDQLDL", - "output": "chloroplast thylakoid membrane ; cytochrome b6f complex ; electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity ; cytochrome complex assembly ; photosynthesis" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MERRSALPQDFREVLHCLKMRSKYAVLLVFVVGLVIIEKENNFISRVSDKLKQSPQVLPEANETEASPVQAENGSLASLRQLDTAFSQLRTRLRNVTLQLAGELGIAAPEPRRHVLLMATTRTGSSFVGEFFNQQGNIFYLFEPLWHIERTVTFEPGGANAVGSALVYRDVLQQLLLCDLYILESFISPAPEEHLTAALFRRGSSHSLCEEPVCTPSLKKVFEKYHCKNRRCGPLNITLAAEACRRKQHMALKTVRIRQLEFLQPLAEDPRLDLRIIQLVRDPRAVLVSRMVAFSGKYESWKKWAAEGEAPLQEDEVQRLRGNCESIRLSAELGLRQPRWLRGRYMLVRYEDVARAPLRKALEMYRFAGIHPTPQVEEWIRANTQAPQDSNGIYSTQKNSSEQFEKWRFSIPFKLAQVVQDACEPAMRLFGYKLASSAQELTNRSLSLLEEGPPTRIT", - "output": "Golgi membrane ; chondroitin 6-sulfotransferase activity ; N-acetylglucosamine 6-O-sulfotransferase activity ; carbohydrate metabolic process ; chondroitin sulfate biosynthetic process ; N-acetylglucosamine metabolic process" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MTLNKTDRIVITLGKQIVHGKYVPGSPLPAEAELCEEFATSRNIIREVFRSLMAKRLIEMKRYRGAFVAPRNQWNYLDTDVLQWVLENDYDPRLISAMSEVRNLVEPAIARWAAERATSSDLAQIESALNEMIANNQDREAFNEADIRYHEAVLQSVHNPVLQQLSIAISSLQRAVFERTWMGDEANMPQTLQEHKALFDAIRHQDGDAAEQAALTMIASSTRRLKEIT", - "output": "cis-regulatory region sequence-specific DNA binding ; DNA binding ; DNA-binding transcription repressor activity ; identical protein binding ; ligand-activated transcription factor activity ; metal ion binding ; transcription cis-regulatory region binding ; negative regulation of DNA-templated transcription initiation" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MENKHIPILLNEAIKSLNIKSDGIYLDLTVGMGGHSSEILKRLKNGLLVGFDKDLFAIEESRKRLSKIGSNFQLIHSDFNNVADELAKLNINAVDGILVDLGISSPQVDNAERGFSYSKDARLDMRMNTNQALDAHFVVNTYSEDELITIFYNYAEVKLAKQVANAIIKNRPINTTLELAEVIKSAYPAKLLSLKNPCKAVFQAIRIEVNNEFSSINSMLVQALNLLKKDSSLAIITFHSLEDSIIKKFFGNLIKSKHPSKMPIKEEKKYIVKVYSPSKAEISENNRSRSAKLRVLTKLI", - "output": "cytoplasm ; rRNA (cytosine-N4-)-methyltransferase activity ; rRNA base methylation" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MATTTLPNTKQQAAQFANSVADRAKENIDAAKEQLQKALDKLGKTGKKLTLYIPKNYKKGNGLTALIKAAQKLGIEVYHEGKDGPALTNGILNTGKKLLGLTERGLTLFAPELDKWIQGNKHLSNSVGSTGNLTKAIDKVQSVLGTLQAFLNTAFSGMDLDALIKARQNGKNVTDVQLAKASLNLINELIGTISSITNNVDTFSKQLNKLGEALGQVKHFGSFGDKLKNLPKLGNLGKGLGALSGVLSAISAALLLANKDADTATKAAAAAELTNKVLGNIGKAITQYLIAQRAAAGLSTTGPVAGLIASVVSLAISPLSFLGIAKQFDRARMLEEYSKRFKKFGYNGDSLLGQFYKNTGIADAAITTINTVLSAIAAGVGAASAGSLVGAPIGLLVSAITSLISGILDASKQAVFEHIANQLADKIKAWENKYGKNYFENGYDARHSAFLEDSLKLFNELREKYKTENILSITQQGWDQRIGELAGITRNGDRIQSGKAYVDYLKKGEELAKHSDKFTKQILDPIKGNIDLSGIKGSTTLTFLNPLLTAGKEERKTRQSGKYEFITELKVKGRTDWKVKGVPNSNGVYDFSNLIQHAVTRDNKVLEARLIANLGAKDDYVFVGSGSTIVNAGDGYDVVDYSKGRTGALTIDGRNATKAGQYKVERDLSGTQVLQETVSKQETKRGKVTDLLEYRNYKLDYYYTNKGFKAHDELNSVEEIIGSTLRDKFYGSKFNDVFHGHDGDDLIYGYDGDDRLYGDNGNDEIHGGQGNDKLYGGAGNDRLFGEYGNNYLDGGEGDDHLEGGNGSDILRGGSGNDKLFGNQGDDLLDGGEGDDQLAGGEGNDIYVYRKEYGHHTITEHSGDKDKLSLANINLKDVSFERNGNDLLLKTNNRTAVTFKGWFSKPNSSAGLDEYQRKLLEYAPEKDRARLKRQFELQRGKVDKSLNNKVEEIIGKDGERITSQDIDNLFDKSGNKKTISPQELAGLIKNKGKSSSLMSSSRSSSMLTQKSGLSNDISRIISATSGFGSSGKALSASPLQTNNNFNSYANSLATTA", - "output": "cell outer membrane ; extracellular region ; calcium ion binding ; channel activity ; toxin activity ; killing of cells of another organism" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "RRLSLHEYLSMGLLQEAGISVPHGVVARTPDEAYKIAKEIGSKDLVIKAQVLAGGRGKGTFEGGLKGGVKIVFSPEEAKAVSSRMIGKKLFTKQTGEKGRICNQVFVCERRYPRREYYFAITMERSFQGPVLIGSSQGGVNIEDVAAENPDAIIKEPIDIVEGIKKEQAVRLAQKMGFPSNLVDEAAENMIKLYNLFLKYDATMIEINPMVEDASGVVMCMDAKINFDSNSAYRQKKIFDMQDWTQEDERDRQAAKADLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVGGGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVVAVKDLDLKIPVVVRLQGTRVDDAKALITASGLKILACDDLDEAAKMVVKLSEIVTLAKQAHLDVKFQLPI", - "output": "mitochondrion ; ATP binding ; metal ion binding ; succinate-CoA ligase (ADP-forming) activity ; tricarboxylic acid cycle" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MSSGRIVQIIGAVIDVEFPRDQVPNVYEALKVQGAETTLEVQQQLGDGVVRTIAMGSTEGLKRGLDVNSTGKAISVPVGKATLGRIMDVLGNPIDEAGPIGEEEQWEIHRAAPSYAEQAGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKKGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPNVIGQEHYETARGVQYVLQRYKELKDIIAILGMDELSEDDKLLVARARKIQRFLSQPFFVAEVFTGAPGKYVSLKDTIAGFSGILKGDYDHLPEQAFYMVGGIDEAIEKAKKL", - "output": "plasma membrane ; proton-transporting ATP synthase complex, catalytic core F(1) ; ATP binding ; proton-transporting ATP synthase activity, rotational mechanism ; proton-transporting ATPase activity, rotational mechanism" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MKKGTVLNSEISSVISRLGHTDTLVVCDAGLPVPHSTTRIDMALTQGVPSFMQVLDVVTAEMQVETAILATEIKQHNPQLHETLLGHIEQLQQHQGNTIEIRYTTHEQFKQQTADSQAVIRSGECSPYANIILCAGVTF", - "output": "cytoplasm ; D-ribose pyranase activity ; intramolecular lyase activity ; monosaccharide binding ; D-ribose catabolic process" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MTKIIAVTACPSGVAHTYMAAEALESAAKAKGWEVKVETQGSIGLENELTAEDVASADMVILTKDIGIKFEERFAGKTIVRVNISDAVKRADAIMSKIEAHLAQTA", - "output": "cytoplasm ; transmembrane transporter complex ; kinase activity ; protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity ; protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity ; phosphoenolpyruvate-dependent sugar phosphotransferase system ; phosphorylation" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MSVLNTFLVIVALILCYVNDFPVTGHEVQLPPGTKFFCQECQMTAVIHVLKHRGCKPKAIPSFACIGKCTSYVQVSGSKIWQMERTCNCCQESGEREATVVLFCPDAQNEEKRFRKVSTKAPLQCMCRPCGSIEESSIIPQEVAGYSEEGPLYNHFRKSL", - "output": "extracellular region ; hormone activity" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MDFGIGFLSNNVMLPILDFFYGIVPSYGLAIVALTLVVRFAVYPLSAGSIRNMRRMKVVQPIMQKRMQEIQQKYKDNPAEQQKAMAEVYREFGNPLAGCFPLLLQLPILFALFATLRGSPFADVNYQINLQIVPPDQPVLAQPFATKPQNIYVDEGVHFPIQAVVPSGTRIPVGQMVDLQFQTKEGKPFSELVAAYPNSHLQPKWQIIRGQERATIDREGHLQALQPGEVTVQGTIPGIAADKGFLFISALGHVGVIDQGELFITLPDGARQFNWGAIHWDILVMILGFGVSLYVNQLLSGQGSSNNPQQQTVNQLTPIIFSGMFLFFPLPAGVLLYMLIANIFQTVQTFILQREPLPENLQKLVEEQERAEAIKNRAPLPFEGKGAKGAKATKAKGNPSS", - "output": "plasma membrane ; membrane insertase activity ; protein transport" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MFLPKAAVSAFSMHGSLCFLWTVCLSISPLSQQGVQAFQCSNGVSLPSDYVCDFTDHCGDNSEEQQCWSYGRCNFEDRLCSMTEDQTLQPGWTRRSGIISNSPPFWDHNGNISAHFLALVSRVDSISSNLRSRIFLPTNDQQVCQITFYNFSSNQNGKLIAGLQTLCGDPIEHLWQKTEILQSRWERNVITVQSSQQFQVIFQAQMLATHGQEEVIAIDDISFSSGCLPADVCQTCGFDLDTCGLATEASAGRTSWMCTKVREIPSLDSVPWQDQRGHDEGSFVWMRAGHASVSRLVESSAYLNSSVCHCMDGNCRLQFNYTMENSILRVRLYNDKEEKKTWTFNTSTYSTWMKADVLIPEDLKAFKVVLEGTVLSQKSFIGIDQLLVYNFGQTHSQKLCSVNEYTPASRQCLTHSSVCDSGMDHSNGIDEDSEACASLLTWDFESGFCGWEPFPTEDSHWEVVRGLSNGEHLFLEAGHTVSRNQGSFIYFGPQKSTAVARLGSPILTKSLTTFTPCQVRFWYHLSEHSSLSVFTRTSVDGSLLKQSEVTQFSDSQWSQAKVDLHAKAEESTLPFQLVLEATILSSNATVAVDDISISHECEISYKSLRSTSIQNKVADCDFEANSCGWFEASGGDHFDWVWSSQSNLSADLEQQAPPRDHTHGTAQGHFMFILKTSNSLFQTAKLQSPTFSQTGPGCTMSFWFYNYGLSVGAAELQLHLENSRDTTALWRVLYNQGNQWSEATVQLGRLTQPFYLSLEKVSLAVYSGVSAVDDIHFENCALPPPVESCDEPDHFWCRQTKACIGRHQLCDLVDDCGDYTDETGCAPGLQCNFENGICNWEQSTKDDFNWTRYQGPTSTMNTGPMKDHTLGTAKGHYLYIETSGPQGFQDKAVLLSPILNATEAKVCTFRLYYHMFGKHIYRLAIYQRIWSNTKGQLLWQIFGDQGNRWIRKDLSITSRKPFQILIMASVGDGFTGDIAIDDLSFMDCTLYPDNLPMDIPSPPETSVPVTLPPNNCTDDQFVCRSNGHCVGNIQKCDFRYDCIDKSDESSCVLEVCTFEERKLCKWYQPIPANSLHDSNTFRWGLGNGISIHHGEENHRPSVDHTKNTTDGWYLYADSSNGKFGDLADIVTPVISLMGPRCTLVFWTYMNGATVGSLQVLIKMGNTISKVWAQSGQQGPQWKKAEVFLGIHSHVEIVFRAKRGVSYIGDVAVDDVSFQNCSPLLSTNRKCTTDEFMCANKHCIEKDKLCDFVNDCADNSDETTFICGTSSGRCDFEFDLCTWEQDQDEDIDWNLKASNIPATSTEPAVDHTLGNSSGHYIILKSFFPQQPVKTGRISSPVISKRSKDCKIIFNYHMYGSGIAALLLLQVTVTNHTRVLLNLTKEQGNFWQRKELSLSSDEDFRVKFEGRVGEGIRGNIALDDIVLTKSCLPSHHSTREEPAFPLPTGFCPRGYEECQNGRCYSPEQRCNFVDDCGDNSDENECGGSCTFEKGWCGWKNSLAENSDWVLGIGSYKSQRPPKDHTLGNEHGHFMYLEATPVGLHGDKAHFKSATWQESSAACTMSFWYFISAKATGSIQILIKTDKGLWEVWQQSKPDPGNHWRRATILLGKLRNFEVIFQGIRTRDLGGGAAIDDIEFNNCTTVGETTDICSEETDFLCQDKKCIASHLVCDYKPDCSDTSDEAHCGYYTSTAGSCNFETTSGDWTVECGLTQDPEDDLDWSIGSIIPTEGLSRDSDHTPGSGRHFLYVNTSLAEEGSTARIITSHFFPASLGICTVRFWFYMVDPHIVGILKVYLIEKSGLNILMWSMMRNKNTGWTYAHVPLSSNSPFKVAFEADLGGKEDIFIALDDITFTPTCASGGPALPQPPLCEEGQFACIYALQCVSASEKCDGQEDCIDGSDEMNCSLGPSPQPCSDTEFQCFESQCIPSLLLCDGVADCQFNEDESSCVNQSCPSGALACNSSGLCIPAHQRCDGTAHCKDIQVDESSCSECPIHYCRNGGTCVIENIGPTCRCVQGWTGNRCHIRSNLSTEGSVHTQNYIWTLLGIGLGFLLTHIAVAILCSLGIRRRPMRKSEGVGNHSFINPVYRNCINQEKTQSSIYSFPNPFYGAASGSLETVSHHLKS", - "output": "cytoplasm ; cytoplasmic vesicle membrane ; Golgi apparatus ; cholesterol homeostasis ; negative regulation of bile acid biosynthetic process" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MELDDILDAGRGDRLFLLGNEAAVRAAIESGVGVASTYPGTPSSEIGNVLSKIAKRAGIYFEFSINEKVALEVAAAAAASGVRSFTFMKHVGLNVASDSFMSVAYTGVRAGMVVLSADDPSMFSSQNEQDNRHYARLAWVPLLEPSNPQEILEYMNHAFELSEEYRIPVLLRTTTRVSHMRGVVEAGERRAEPVKGFFRKNPEQFVPVPATARVMRRELVEKMKKLKRVADTSELNRVLNEDSESDLGIIASGGAFNYVYDALQTLGLDVPVLKLGFTYPFPAGLVAEFLSGLEGVLVVEEVDSVMEKEVLAVATSEGLDVGVHGKLDGTLPEIYEYSEDIVRRAISGLTGIKSHEKGIEAPELPERPPALCPGCPHRAMYYSVRRAASELGIEGEDLIFPTDIGCYTLGIEPPYSAADYLLSMGSSVGTACGFSAATSQRIVSFIGDSTFFHAGIPPLINAVHNRQRFVLVILDNRTTAMTGGQPHPGLPVDGMGEEAPAISIEDITRACGVEFVETVNPMNIRRSSETIRRALQHESVAVVISRYPCMLSEGAVRGRPVRVDEEKCDLCLECLNELACPAIVEEDGRVFIDPLYCRGCTICLQICPAGAIKPEGKR", - "output": "4 iron, 4 sulfur cluster binding ; indolepyruvate ferredoxin oxidoreductase activity ; metal ion binding ; thiamine pyrophosphate binding ; organic acid metabolic process ; organic substance biosynthetic process ; sulfur compound biosynthetic process" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MASGTTIQPSRPSLTSNDSAVLQALFDAESSPSSAVAIDPSLSPFPEYLHISASDHESLKARELSIIRSLQSDDVSMDTITSAIRDLDALITEHPTYPSAYVNRAQALRLHIEKTAEASTDPEEAIFTPGNTESASRLFSDLGQAISLCTPRSPADPVSTVQARILADSHTHRGYLLLKAARLKKNANGNEMVGGPDKLRDMGPDQLEEMASRDFFFGGRYGNKVAQQLAVQTNPYAKMCGAIVKEALRKEVEGVI", - "output": "cytoplasm ; melanin biosynthetic process from tyrosine ; tyrosine catabolic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MTRIKRGYIARRRRTKLRLFASSFRGAHSRLTRTMTQQRIRALVSAHRDRGKRKRDFRRLWITRINAVIHEMGVFYSYNEFIHNLYKKQLLLNRKILAQIALLNRSCLYTISNDIKK", - "output": "chloroplast ; chloroplast envelope ; chloroplast stroma ; plastid ; ribonucleoprotein complex ; ribosome ; mRNA binding ; rRNA binding ; structural constituent of ribosome ; ribosomal large subunit assembly ; translation" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MIKVEIKPSQAQFTTRSGVSRQGKPYSLNEQLCYVDLGNEYPVLVKITLDEGQPAYAPGLYTVHLSSFKVGQFGSLMIDRLRLVPAK", - "output": "single-stranded DNA binding ; DNA replication ; rolling circle single-stranded viral DNA replication" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MSRAIAADKREDDSQFDSTLRPKSLDDYIGQEKIKGNLRLFIEAARGRGEALDHVLLYGPPGLGKTTLANIVACEMGVNLKSTSGPVIERPGDLAAILTNLEPHDVLFIDEIHRLSHVVEEILYPAMEDFQLDIIIGQGPSARSIKLDLPRFTLVGATTRAGLLSSPLRDRFGVISRMDFYTHDELATIITRSSRILGMEIEPRGADELSRRSRGTPRIANRLLRRVRDFAQVRADGVITRQVVKETLALLEIDEMGFDHMDRMILLTIIDKFSGGPVGLDTIAAAISEESDTIEDVYEPYMIQNGFLNRTPRGRVATLAAYEHFGRSVPAAPQAALL", - "output": "cytoplasm ; ATP binding ; ATP hydrolysis activity ; DNA binding ; four-way junction helicase activity ; DNA recombination ; DNA repair ; SOS response" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MKVLGLDVGDKKIGVALSDELGLTAQGLTVIYRTSLKKDLEEIKKIIDLHHVTEVVIGYPRNMNGTAGPRAELVKRFARELYKFTGIKPVFWDERLSTVEAEKLLISGDISRRKRKKVIDKLAATLILSGYLNYKSKN", - "output": "cytoplasm ; nuclease activity ; rRNA 5'-end processing" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MRIKLNTEDIMRISLFEKMTGANVIDSTSDDEKIVFVVKEGDIGAAIGKGGENVKNATDKFGKKIDLIEYSEDLKQFIKNIFAPIELEDVWVKKFGNDLVVYVRVHPRLRRAIIGDKGKNIDRAVDIAGRLAGVKNIKVVAGLRKDADNRPKKDEIPEKAAESSENVQAEENQ", - "output": "cytoplasm ; RNA binding ; DNA-templated transcription termination ; transcription antitermination" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MSEEQILNTHNASILLSAANKSHYPQDDLPEIALAGRSNVGKSSFINTILGRKSLARTSSKPGKTQLLNFFNVDDKLRLVDVPGYGYAKVSKAERARWGKMIEEYLTTRQNLRAVVSLVDFRHEPSQDDIQMYEFLKYYEIPVIIVATKADKVPRGRWNKHESMVKKSLNFDQTDAFIIFSSVERIGIDESWDTILEYL", - "output": "GTP binding ; metal ion binding ; division septum assembly" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MATLFIADLHLCAEEPAITAGFLRFLAGEARKADALYILGDLFEAWIGDDDPNPLHRQMAAAIKAVSDSGVPCYFIHGNRDFLLGKRFARESGMTLLPEEKVLELYGRRVLIMHGDTLCTDDAGYQAFRAKVHKPWLQTLFLALPLFVRKRIAARMRANSKEANSSKSLAIMDVNQNAVVSAMEKHQVQWLIHGHTHRPAVHELIANQQPAFRVVLGAWHTEGSMVKVTADDVELIHFPF", - "output": "cytoplasm ; extrinsic component of plasma membrane ; manganese ion binding ; UDP-2,3-diacylglucosamine hydrolase activity ; lipid A biosynthetic process" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MTAEDAAAAMSSDSAAGGAASAKAPEGVAGAPNEAALLALLARTGYRMVQENGQRKYGGPPPGWEGPHPQRGCEVFVGKIPRDVYEDELVPVFEAVGRIYELRLMMDFDGKNRGYAFVTYCHKGEAKRAVRELNNHEIRPGRLLGVCCSVDNCRLFIGGIPKMKKREEILEEIAKVTEGVLDVIVYASAADKMKNRGFAFVEYESHRAAAMARRKLMPGRIQLWGHQIAVDWAEPEIDVDEDVMETVKILYVRNLMIETTEDTIKKSFGQFNPGCVERVKKIRDYAFVHFASREDAVLAMNSLNGTELEGSCLEVTLAKPVDKEQYSRYQKAAKGGGAAEAAAPQPGYVYSCDPYTLAYYGYPYNALIGPNRDYFVKAGSIRGRGRGAAGSRAPGPRGSYLGGYSAGRGIYSRYHEGKGKQQEKGYELVPNLEISAVNPVAIKPGTVAIPAIGAQYSMFQAAPAPKMIEDGKIHTMEHMISPIAVQPDPASAAAAAAAAAAAVIPAVSTPPPFQGRPITPVYTVAPNVQRIPAAGLYGAGYVPFAAPATATLATLQKNAAAAAVYGGYAGYIPQAFPAATIQVPIHDVYPTY", - "output": "cytoplasm ; nucleus ; mRNA binding ; mRNA processing ; RNA splicing" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MSEKAILSCRNLGKSYEEGPESVEVLANLQLELHPGERVAIVGKSGSGKSTLLNLLGGLDTPTKGGVWLDGEELSALSEKKRGLLRNRALGFVYQFHHLLPEFTALENVCMPLLIGKTAIPEARQRATALLERVGLGHRLEHKPAELSGGERQRVAIARALVNNPGLVMLDEPTGNLDSHTAEGIQDLMLELSTSMRTAFLVVTHDMNLARQMDRVLQLQEGCLTPI", - "output": "plasma membrane ; ATP binding ; ATP hydrolysis activity ; lipoprotein localization to membrane" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MSALCPLLTPPASEALLLAQARQLSGYTLGELAAMAGITTPKDLKRDKGWIGVLLEIWLGASAGSKPEQDFAALGVELKTIPVDSLGRPLETTFVCVAPLTGNSGVTWETSHVRHKLKRVLWVPVEGDRSIPLAERRVGSPLLWSPSEEEDRQLRLDWEELMDMIVLGQVERITARHGEVLQLRPKAANARALTEAIGARGEPILTLPRGFYLKKNFTQALLARHFLLQNP", - "output": "cytoplasm ; DNA binding ; endonuclease activity ; DNA modification ; mismatch repair" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MSSVSEVNVDIKDFLMSINLEQYLLHFHESGFTTVKDCAAINDSLLQKIGISPTGHRRRILKQLQIILSKMQDIPIYANVHKTKKNDDPSKDYHVPSSDQNICIELSNSGSVQTSSPPQLETVRKNLEDSDASVERSQYPQSDDKLSPPKRDFPTAEEPHLNLGSLNDSLFGSDNIKIESLITKKTVDHTVEEQQTEKVKLITENLSKLPNADSECLSFVGCSTSGTNSGNGTNGLLEGSPPSPFFKFQGEMIVNDLYVPSSPILAPVRSRSKLVSRPSRSFLLRHRPVPEIPGSTKGVSGSYFRERRNVATSTEKSVAWQNSNEENSSSIFPYGETFLFQRLENSKKRSIKNEFLTQGEALKGEAATATNSFIIKSSIYDNRKEKISEDKVEDIWIPREDKNNFLIDTASESEYSTVEECFQSLRRKNSKASKSRTQKALILDSVNRHSYPLSSTSGNADSSAVSSQAISPYACFYGASAKKVKSGWLDKLSPQGKRMFQKRWVKFDGLSISYYNNEKEMYSKGIIPLSAISTVRVQGDNKFEVVTTQRTFVFRVEKEEERNDWISILLNALKSQSLTSQSQAVVTPEKCGYLELRGYKAKIFTVLSGNSVWLCKNEQDFKSGLGITIIPMNVANVKQVDRTVKQSFEIITPYRSFSFTAETEKEKQDWIEAVQQSIAETLSDYEVAEKIWFNESNRSCADCKAPDPDWASINLCVVICKKCAGQHRSLGPKDSKVRSLKMDASIWSNELIELFIVIGNKRANDFWAGNLQKDEELHMDSPVEKRKNFITQKYKEGKFRKTLLASLTKEELNKALCAAVVKPDVLETMALLFSGADVMCATGDPVHSTPYLLAKKAGQSLQMEFLYHNKFSDFPQHDIHSEGVLSQESSQSTFLCDFLYQAPSAASKLSSEKKLLEETNKKWCVLEGGFLSYYENDKSTTPNGTININEVICLAIHKEDFYLNTGPIFIFEIYLPSERVFLFGAETSQAQRKWTEAIAKHFVPLFAENLTEADYDLIGQLFYKDCHALDQWRKGWFAMDKSSLHFCLQMQEVQGDRMHLRRLQELTISTMVQNGEKLDVLLLVEKGRTLYIHGHTKLDFTVWHTAIEKAAGTDGNALQDQQLSKNDVPIIVNSCIAFVTQYGLGCKYIYQKNGDPLHISELLESFKKDARSFKLRAGKHQLEDVTAVLKSFLSDIDDALLTKELYPYWISALDTQDDKERIKKYGAFIRSLPGVNRATLAAIIEHLYRVQKCSEINHMNAHNLALVFSSCLFQTKGQTSEEVNVIEDLINNYVEIFEVKEDQVKQMDIENSFITKWKDTQVSQAGDLLIEVYVERKEPDCSIIIRISPVMEAEELTNDILAIKNIIPTKGDIWATFEVIENEELERPLHYKENVLEQVLRWSSLAEPGSAYLVVKRFLTADTIKHCSDRSTLGSIKEGILKIKEEPSKILSGNKFQDRYFVLRDGFLFLYKDVKSSKHDKMFSLSSMKFYRGVKKKMKPPTSWGLTAYSEKHHWHLCCDSSRTQTEWMTSIFIAQHEYDIWPPAGKERKRSITKNPKIGGLPLIPIQHEGNATLARKNIESARAELERLRLSEKCDKESVDSSLKERASMVAHCLEHKDDKLRNRPRKHRSFNCLEDTEPEAPLGQPKGHKGLKTLRKTEDRNSKATLDSDHKLPSRVIEELNVVLQRSRTLPKELQDEQILK", - "output": "cytoplasm ; GTPase activator activity ; metal ion binding ; phosphatidylinositol-3,4,5-trisphosphate binding ; positive regulation of GTPase activity ; signal transduction" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MQALVNRLWYDRQAGVHWLLVLLLLPLSGLFYLLTSLRRQLFRLGLKASARLDVPVIVVGNITVGGSGKTPTVIYLIELLRRNGYRPGVISRGYGVEFSGCKRVIAGMPANEVGDEPAMIVARTQVPMVIGSDRVAAGKALMDWQAVDVIISDDGLQHYRLKRDIEILVLDGKRRFGNGLLLPAGPLREGRWRQGRVDFTLVNGEGSGPEEFEMALAPGNWRSVADGQVVTANVDKSHESVAIAGIGNPQRFFDTLSEIGVQPSGQHAFDDHQAYSLEAIETVAAGRGVLMTEKDAVKCREFAKSNWWYLPVDAKIAPEFEQQLLTLLKRRENVQQGN", - "output": "ATP binding ; tetraacyldisaccharide 4'-kinase activity ; lipid A biosynthetic process ; phosphorylation" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MIIVTGGAGMIGSNIVKSLNDKGFNDILVVDNLKDGKKFKNLVDLDITDYMDKEDFITQIMAGDDFGPIEAIFHEGACSATTEWDGKYIMMNNYEYSKELLHFCIEREIPFLYASSAATYGETDTFIEEREYEGALNVYGYSKQQFDNYVRRLWADAEEHNETLSQITGFRYFNVYGPREQHKGSMASVAFHLNNQMNAGDNPKLFEGSDEFKRDFVYVGDVAAVNLWFLENGVSGIYNCGTGRAEPFRAVAEAVIKHHGKGEVETIPFPEHLKGAYQEFTQADLTKLRAAGCDVEFKSVADGVAEYMAMINK", - "output": "ADP-glyceromanno-heptose 6-epimerase activity ; NADP binding ; ADP-L-glycero-beta-D-manno-heptose biosynthetic process ; carbohydrate metabolic process" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MRVLFAGTPAVAVPSLDALVQAGFDVVAVLTRPDAPVGRKRVLTPSPVAARAAELGIEVIHAAKVDAEVTARIAAAAPDAAAIVAYGGLIPRAALDVPRHGWINLHFSLLPAWRGAAPVQRAVMAGDDITGAVTFLLEEGLDTGPVFGTLTESVRPDDTSGELLERLSHSGAALLAQTLSAIEAGRAVAVPQSGDVSLAPKLGIDDGRIDWHEPALAIGRRARGVTPEPGAWTTLDGQRVKLEPVALRTDAPALQPGQVLLDGKSVLVGTGSHPVELTRIQPSGKKMMAAADWARGQVALEGVVFE", - "output": "methionyl-tRNA formyltransferase activity" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MQKTISHAFPLGDVTWSNQGRLSIPNAHLESWLLNTGSLTQRLQTRCNDFKVQLVSQRQELATPAEYIQLGVSKMSQQKENWQVREVILHGDNQPWVFARSIIPQALCEADFLELGDKPLGHLIFNDDRFKRQPFQLMCLQPDEAFLHEYGLPPLTEIWGRRSVFCYQQYAMMVAELFLPKAPAYRDSNFDR", - "output": "cytoplasm ; chorismate lyase activity ; pyruvate biosynthetic process ; ubiquinone biosynthetic process" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MAGGFVSQTPGVRNYNYKLTPKVFVTCFIGAFGGLIFGYDLGISGGVTSMEPFLEEFFPYVYKKMKSAHENEYCRFDSQLLTLFTSSLYVAALVSSLFASTITRVFGRKWSMFLGGFTFFIGSAFNGFAQNIAMLLIGRILLGFGVGFANQSVPVYLSEMAPPNLRGAFNNGFQVAIIFGIVVATIINYFTAQMKGNIGWRISLGLACVPAVMIMIGALILPDTPNSLIERGYTEEAKEMLQSIRGTNEVDEEFQDLIDASEESKQVKHPWKNIMLPRYRPQLIMTCFIPFFQQLTGINVITFYAPVLFQTLGFGSKASLLSAMVTGIIELLCTFVSVFTVDRFGRRILFLQGGIQMLVSQIAIGAMIGVKFGVAGTGNIGKSDANLIVALICIYVAGFAWSWGPLGWLVPSEISPLEIRSAAQAINVSVNMFFTFLVAQLFLTMLCHMKFGLFFFFAFFVVIMTIFIYLMLPETKNVPIEEMNRVWKAHWFWGKFIPDEAVNMGAAEMQQKSV", - "output": "plasma membrane ; monosaccharide transmembrane transporter activity ; sucrose:proton symporter activity ; sucrose transport" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MMKTHNLFVSCIESRVQDQGSLYARFHIGTFFRGQALTFGNSIRRALLSEMPGFLMTDVRIQGATHEFAVLPDVEETVLEILLNLKKTVFVPRIPKNQKFETFQGFGFLKNNGPGKVRAADIRLPETVQCVSPEVHIATLTSGAELSLRFNLQFRNFSQLEKREGTFKSKTVAQAKTEDGNVQDTTNELPTLEKNSLFFQQLQNKRNSKDQLFLDTVPMPVQKVNYVIKSLNAKNGSEYIILEIWTDGSLYPQESVEFALRNLTDLFFQFANISKKSN", - "output": "chloroplast ; DNA-directed RNA polymerase complex ; DNA-directed 5'-3' RNA polymerase activity ; protein dimerization activity ; DNA-templated transcription" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MAEITAKLVKELREKSGAGVMDAKKALVETDGDMDKAVELLREKGMAKAAKKADRVAAEGLTGVYVHGNVAAVVEVNAETDFVAKNAQFVELVNATAKVIAEGKPANNDEALALVMPSGETLAEAYVNATATIGEKISFRRFALIEKADEQHFGAYQHNGGRIGVISVVEGGDDALAKQVSMHIAAMKPTVLSYTELDAQFIKDELAQLNHAIELDNESRAMVDKPALPFLKYGSKAQLSDDVITAAEADIKAELAAEGKPEKIWDKIIPGKMDRFMLDNTKVDQAYTLLAQVYIMDDSKTVEAYLDSVNAKAIAFARFEVGEGIEKKANDFESEVAATMAAALNN", - "output": "cytoplasm ; translation elongation factor activity" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MATDGMVLHKRSLSEGGTSTQAWKVLSQTLPSRGPDVDAWWQLTGRHLAVLLDAAAYPIEKQYECLLYHYHYAAPYLGPAPREGASPPTWKSMLQLDGTPFEFSWKWNNPGGEPDVRFGLEPIGPMAGTSLDPLNHLAMREILYKLSSAVPGSDLTWTHHFLATLFDHDYAKYTQKAATMGSSIGTSLVYSLEFQRKSTGLKTYFHPRKLDQQAFLDIPSWEASFRGLHPNSPSRTAVHEFLSTNPEGKLLKPFCLSVDNCSPAKARIKWYFNSPHTNFRAIREIMTLGGRIADTETRTKQFSELFNLLKTVTEEHADFPETSEFPYVPNNGDSIIPNFADAPDMLKGCVYFFDIAPGRNLPAIKVYFPVRNHCRNDLAVTQNLNRWLESRGRGQYGAAFGRALETIADYRRLEDSGGLLSFLSCQFMEDGELDLTSYFNPQAFHSGRLTHRRATRRRGDDRW", - "output": "prenyltransferase activity ; alkaloid metabolic process" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MAVADIKTAKIVKENARSANDTGSPEVQVSLLTARINELTPHFKANTKDHHSRCGLLKMVSRRRRLLDYLKGKDLDCYRALIEKLGLRK", - "output": "cytoplasm ; ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MDGMIAMLPAPLQKLSSHIDFQGQKVAERTYQVILTIAGIIGFLVGFWTQQLSYAMFTVLGASAFTALIILPPWPFLFRKNPIVWHTPAEPQESGDKKKETKKTK", - "output": "endoplasmic reticulum ; signal peptidase complex ; protein targeting to ER ; signal peptide processing" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MANALIEDLKWRGLIYQQTDEEGIEELLNKEQVTLYCGADPTADSLHIGHLLPFLTLRRFQEHGHRPIVLIGGGTGMIGDPSGKSEERVLQTESQVEANVKGLSNQMHRLFEFGSDKGAKLVNNKDWLGQISLISFLRDYGKHVGVNYMLGKDSIQTRLEHGISYTEFTYTILQAIDFGYLNRELNCKIQVGGSDQWGNITSGIELMRRMYGQTEAYGLTIPLVTKSDGKKFGKSESGAVWLDPEKTSPYEFYQFWINQSDEDVIKFLKYFTFLEKEEINRLEQSKNEAPHLREAQKALAENVTKFIHGEAALKDAIRISKALFSGDLKSLSAKELKEGFKDVPQVTLSTKTTNIVEALIETGIASSKRQAREDVNNGAIYINGERQQSVDYELSSKDLIEDEITIIRRGKKKYFMVNYQS", - "output": "cytoplasm ; ATP binding ; RNA binding ; tyrosine-tRNA ligase activity ; tyrosyl-tRNA aminoacylation" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MIWHVQNENFILDSTRIFMKAFHLLLFDGSFIFPECILIFGLILLLMIDSTSDQKDMPWLYFISSTSLVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLINTQMYNSPGISIALIFITVGIGFKLSPAPSHQWTPDVYEGSPTPVVAFLSVTSKVAASASATRIFDIPFYFSSNEWHLLLEILAILSMIVGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNGGYASMITYMLFYISMNLGTFACIVLFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFWCGWQAGLYFLVSIGLLTSVLSIYYYLKIIKLLMTGQNQEITPHVRNYRGSPLRSNNSIELSMIVCVIASTIPGISMSPIIEIAQDTLF", - "output": "chloroplast thylakoid membrane ; NADH dehydrogenase (ubiquinone) activity ; quinone binding ; ATP synthesis coupled electron transport ; photosynthesis, light reaction" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MAFALLRPVGAHVLYSDVRLLSEDEENRSESDASDQSFGCCEGLETTRRGPGPGGGRRASSGAGPVVVVRQRQAANARERDRTQSVNTAFTALRTLIPTEPVDRKLSKIETLRLASSYIAHLANVLMLGDAADDGQPCFRAAGGGKSAVPAADGRQPRSICTFCLSNQRKGGSRRDLGGSCLKVRGVAPLRGPRR", - "output": "nucleus ; RNA polymerase II transcription regulator complex ; bHLH transcription factor binding ; DNA-binding transcription activator activity, RNA polymerase II-specific ; DNA-binding transcription factor activity, RNA polymerase II-specific ; E-box binding ; protein dimerization activity ; ear development ; establishment of epithelial cell apical/basal polarity ; mesenchymal to epithelial transition ; muscle organ morphogenesis ; negative regulation of hematopoietic stem cell differentiation ; neuromuscular process controlling posture ; paraxial mesoderm development ; positive regulation of stem cell differentiation ; positive regulation of transcription by RNA polymerase II ; post-anal tail morphogenesis ; regulation of extracellular matrix organization ; respiratory system process ; skeletal system morphogenesis ; somitogenesis ; stem cell population maintenance" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MLLVIGLGNPGKEYQYTRHNVGFIAIEKIANQYNSSFSTKKKFNCEIAETISDGQKIIFIKPTTYMNLSGKSVISVKTYYNIYPAKIFVIHDDIDLDTGRIKFKTGGGNGGHNGLKSIDGVIGNNYNRIRIGVGRPQNNQDVADYVLNHFSKPEYETVMQAIDRITSNFGLILENKLEEFKNKIA", - "output": "cytoplasm ; aminoacyl-tRNA hydrolase activity ; translation" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MISKPDKNKLRVKRHKRVRGKISGTAARPRLNVFRSNANIYAQLIDDVAGVTLASASSHDAEVSGTKTEQATKVGELIATRGKAAGFEDVIFDRGGYLYHGRVQALAESARENGLKF", - "output": "cytoplasm ; ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MAEFVRAQIFGTTFEITSRYTDLQPVGMGAFGLVCSARDQLTGQPVAVKKIMKPFSTPVLSKRTYRELKLLKHLRHENIISLSDIFISPLEDIYFVTELLGTDLHRLLTSRPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQDPQMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAACIFAEMLEGKPLFPGKDHVNQFSIITELLGTPPDDVIQTICSENTLRFVKSLPKRERQPLASKFKNADPDAVDLLERMLVFDPKKRIRAGEALAHEYLAPYHDPTDEPVAEEKFDWSFNDADLPVDTWKIMYSEILDFHNIDQANDAGQVLVEGAVADGQQAFA", - "output": "cytoplasm ; nucleus ; ATP binding ; MAP kinase activity ; protein serine kinase activity ; protein phosphorylation ; stress-activated MAPK cascade" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MNAPLAGIWPWLPLLLTWLAPEVSSSWWYMRATGGSSRVMCDNVPGLVSRQRQLCHRHPDVMRAIGLGVAEWTAECQHQFRQHRWNCNTLDRDHSLFGRVLLRSSRESAFVYAISSAGVVFAITRACSQGELKSCSCDPKKKGTAKDSKGTFDWGGCSDNIDYGIRFARAFVDAKERKGKDARALMNLHNNRAGRKAVKRFLKQECKCHGVSGSCTLRTCWLAMADFRKTGDYLWRKYNGAIQVVMNQDGTGFTVANKRFKKPTKNDLVYFENSPDYCIRDRDAGSPGTAGRVCNLTSRGMDSCEVMCCGRGYDTSRITRMTKCECKFHWCCAVRCQDCLEALDVHTCKAPKSADWAAPT", - "output": "collagen-containing extracellular matrix ; cytoplasm ; extracellular region ; cytokine activity ; frizzled binding ; atrial cardiac muscle tissue morphogenesis ; canonical Wnt signaling pathway involved in midbrain dopaminergic neuron differentiation ; cardiac epithelial to mesenchymal transition ; cardiac muscle cell proliferation ; cell proliferation in midbrain ; cellular response to transforming growth factor beta stimulus ; epithelial cell proliferation involved in lung morphogenesis ; labyrinthine layer blood vessel development ; lung induction ; mammary gland epithelium development ; mesenchymal cell proliferation ; positive regulation of cardiac muscle cell proliferation ; positive regulation of DNA-binding transcription factor activity ; positive regulation of epithelial cell proliferation involved in lung morphogenesis ; positive regulation of fibroblast proliferation ; positive regulation of mesenchymal cell proliferation ; positive regulation of neurogenesis ; positive regulation of transcription by RNA polymerase II" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MIDPKLLRNDLPMVVAALARRGFDFPEAEYQKLEDLRKASQVKSETLQAERNKLSQQIGKAKSKGEDCADLMAQAAQLESEQAAVEASFNETQKQLDTLLSSVPNLPDDSVPTGKDENDNPEIRRWGTPRTFDFTPKEHADLMQIGLDFTNGVKLAGARFTVLRGALSRLHRAIAQFMLDTHTEEHGYQEMSVPYLVNPQTIYGTGQLPKFEQDLFKTRLSDRDFYLIPTAEVSLTNLVAQEILEESVLPLQFVAHTPCFRSEAGSAGRDVRGMIRQHQFDKVELVHITTPEDSHAALERLTAHAERILQKLELPYRVILLCTGDMGFAARKTYDLEVWLPGQGKYREISSCSNCWDFQARRMQARFRAEGEKRPQLVHTLNGSGLAVGRTLVAILENYQQADGNILIPKALQPYMNGLDRITPSA", - "output": "cytoplasm ; ATP binding ; serine-tRNA ligase activity ; selenocysteine biosynthetic process ; seryl-tRNA aminoacylation" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MINLGSYNLLRHEKDSFLEIIRRIKDGDNLLRNKFIDDFKPFILKCVSQLVGKKNDLTQSDEYSIALIAFNEAIESYDLDKKTKFVSFSKQVIKRRLIDYLRSTKKNNVAVPFSYFNDCNSSFNDSSTGNFEEKFLYDRNSDYSIDFEAREEIKNLELKICEYKMTIEDLIECSPKHRDTIILCLNVANIIIEDESLYQMFNKRKTLPYKELTERFNLCRRTLEKNRKFITAMVLILKSDLEVLKKYIYDTLGR", - "output": "cytoplasm ; DNA binding ; sigma factor activity ; DNA-templated transcription initiation" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "ITCCTRGTCAQHC", - "output": "extracellular region ; host cell postsynaptic membrane ; acetylcholine receptor inhibitor activity ; ion channel regulator activity ; toxin activity" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MKFIIKLFPEITIKSQSVRLRFIKILTTNIRNVLKHLEDDTLAIVRHWDHIELRTKDDNLGPEICDALTRIPGIHHILEVEDRSYSDMHNIFEQTLEAYRETLVGKTFCVRVKRRGKHEFSSGDVERYVGGGLNQHIESAKVNLTRPQVTVNLEVDQDKLILVKARHEGLGGFPIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGGSAHEIGVKQVAHYLWNRFGSSHRVRFIAIDFEPVVGEILEKVEDGQMGVVLKRMMVRAASQVAERYGVQALVTGEALGQVSSQTLTNLRLIDNASDTLILRPLISHDKEHIINLARQIGTEDFAKTMPEYCGVISKSPTVKAVKAKIEEEESHFDFSILDRVVSEAKNVDIREIAQQSREQVVEVETVAELADTDVLLDIRAPDEQEEKPLKLDQVEVRSLPFYKLSSQFADLDQSKTYLLYCDRGVMSRLQALYLREQGYTNVKVYRP", - "output": "cytoplasm ; ATP binding ; CCA tRNA nucleotidyltransferase activity ; tRNA binding ; tRNA U4 sulfurtransferase ; thiamine biosynthetic process ; thiamine diphosphate biosynthetic process ; thiazole biosynthetic process ; tRNA thio-modification" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MAGKGNPVPGPHLNGFPVPTYSYFFPHMLGSLSPPALPGLPISGYSTPSPATIETQSTSSEEIVPSPPSPPPPPRVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHREKNCIINKVTRNRCQYCRLQKCLEVGMSKESVRNDRNKKKKDEKKPECIENYVLSPDTEQMINRVRKAHQETFPSLCQLGKYTTTNSSERRVALDVDLWDKFSELSTKCIIKTVEFAKQLPGFVTLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFAFANQLLPLEMDDAETGLLSAICLLCGDRQDLEQAEKVDILQEPLLEALKIYVRRRRPHKPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENSEGLESGATGSRPSGAPPGSCSPSLSPSSAQSSPPTQSP", - "output": "nucleus ; nuclear receptor activity ; sequence-specific DNA binding ; zinc ion binding ; hindbrain morphogenesis ; liver development ; response to retinoic acid ; retinoic acid receptor signaling pathway" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MSNASLVTAFILTGLPHAPGLDALLFGIFLVVYVLTVLGNLLILLVIRVDSHLHTPMYYFLTNLSFIDMWFSTVTVPKMLMTLVSPSGRAISFHSCVAQLYFFHFLGSTECFLYTVMSYDRYLAISYPLRYTSMMSGSRCALLATGTWLSGSLHSAVQTILTFHLPYCGPNQIQHYFCDAPPILKLACADTSANVMVIFVDIGIVASGCFVLIVLSYVSIVCSILRIRTSDGRRRAFQTCASHCIVVLCFFVPCVVIYLRPGSMDAMDGVVAIFYTVLTPLLNPVVYTLRNKEVKKAVLKLRDKVAHPQRK", - "output": "plasma membrane ; G protein-coupled receptor activity ; olfactory receptor activity ; detection of chemical stimulus involved in sensory perception of smell" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MCFGGRGKDDEAEASRSRELDKQIRADEKRLSKEVKLLLLGAGESGKSTILKQMKLIYAQGFSKNEKLEWRPVIFANILQSFRLIFDAMNEFNIKLEDEDNEKNMVQMMVDYEMRGDEPLPLEYFEPAKKLWQDSGVRQAIEKGNEFALHDNLQYFCSDLDRLWDRNYVPSDQDLLRSRLRTTGITETVFDLGQLTYRMFDVGGQRSERKKWIHCFENVNCLLFLVAISGYDQCLVEDKDGNQMNEALMLWESIANSHWFTKSALILFLNKIDLFKEKLPRSPITNHGFTDYHGPPDDSKQASKYFMDKFRALNRNPDKEIYGHFTNATDTNLLKITMGSVQDMIIQRNLKQLIL", - "output": "cortical dynamic polarity patch ; heterotrimeric G-protein complex ; G protein-coupled receptor binding ; G-protein beta/gamma-subunit complex binding ; GTP binding ; GTPase activity ; metal ion binding ; G protein-coupled receptor signaling pathway ; negative regulation of MAPK cascade ; pheromone response MAPK cascade ; pheromone-dependent signal transduction involved in conjugation with cellular fusion" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MITLRNISFSYNGTKENNLCDISLHIPKGQCVLLCGASGCGKTTLTRLINGLIPHFFEGEFSGEAIINGMNSEEADIAQLSDSVGTVFQNPRTQFFNTDTDSEIVFGLENRGLPPEQLLSRLEKVTEDLQIQNLRERSIFELSGGEKQKIAFASVYAAAPDIFVLDEPSSNMDYHSIKELSELIKKIKLQGKTIIIAEHRIWYLMDIADRVIFMENGKIAHDMDIKTFVDLPEAQIKSMKLRCRNLADVKAETVNVSPDVSVSFGGHTFAVKDITVKLGHTSVLQDISFSTTGGEIIAITGENGAGKTTLARTLCGLTQEAAGSISFDGNPLSRKMRRERSYMVMQDVGHQLFTDSVYAECRLGIKDLPDPAIDEVLTELSLNRLKERHPLSLSGGQKQRLAVAVSVLCGKDILIFDEPTSGLDLKSMQEAGRIIKRLADDKKTVIVITHDIEFIKTICSRVLILSGGKIVKELCGEKKNELEMQLETF", - "output": "plasma membrane ; ATP binding ; ATP hydrolysis activity ; transmembrane transport" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MDAEPFDEVDEYTTYPSLPASVICPVADTKTRYELSWQPSGHHPQEEGDDCAVVTLVYAAWALMASRMTSSERVVFDTIDGRPDRPAARPLRVLCASSQTVGEYLQALRAHTSSEESYMASPDCKSKRHPTSSTLIATRTSGDAKSSNGTIGNGLPSLAGYPLVLDLQLRGSRLQATAMSDSRCTEPWIVFRLLIRLEYCMKGLHEADSRTRLADIDLMSPDDVEQIWKWNGTLPAAVERCMHDMFEDQVYSQPLALAVDAWDGRLTYKELDELSEKLAGHLIDADVGPEVIVPLCFEKSMWMPIAMLGVLKAGGSFTLLEPSFPEQRLRTIVEKVNASVMISSPSNMSLSSRLLKRVVELDSCSVKSFSAHPSRPRNSQPSSTAMFAVFTSGSTGVPKGAILTHTNYSSALAYQLQPLGFTKDSRVFDFASYAFDVSVHNVFATLTSGACLCIPSDEDRHNDISKVMVDMRVTISHLTPSVTRLIDPDSQPFLKTMVFTGEPLSVDDATRWWGKVDVVNEYGPAECTINTVNSRPISPEAATNIGLPVGVAAWITDPENHQVLVPIGCVGELLVEGPLVGRGYIGDPIKTAASFIQDPKWLLRGVSGHPGRKGRLYKTGDLVRYCADGSLSYLGRKDAQVKIRGQRVHLGDVEHWTQVCMPEAQRVFADVIEPQAISPVPTLAVFVQSPEMGENTATNERPVQIRALRADVQAKLSQHLPSYMVPTVSFWMETLPMTPTGKMDRRMLRRIGSSFSAEQLAQARADRRDGPKRQPTCEMEERMRNIWARVLGMLPQDIHLESNFFHLGGDSIASMRVVAYARRLGIQVMVADVFQHPSLHDLAKNCSQTLARAPEDIPAFSLLGPHFNHALFVQDMSTRYALDPMTIQDAYPCTRLQEGLMFLTSKRPGDYIEQNVLELARDLSLEGLRNAWEQAVKAMPILRTRIAQHNHVGLVQLVLDDTADWDEAKGLEKYLAADRKRSMGLGEPLSRFALVRDEEGTCKWLVWTIHHAIYDGWSIRLVTDAVAEAYGGRSIPQGPQFQAFIKYVQDQDERAAVNYWQRNLQGFDSAPFPPNVPSVDQPVADAAVAHSFATPSGAHGCITTSMLIRAAWALVVGRMANSNDVVFGSTLHGRNAAVNGLDEMVAPTIATIPVRVRFCSTQYVPSYLQAITQEAAEMMPYEQTGLQRIAALSSDAEKACKFQTHVVIQPEDCIPGRSLLGQWRSDSQDQWFSTYALTVEVWLRSDDIFASAMFDSRTIQSWVVTGMLQRLEWTMHQLHHATPSQTLGEINMSSAEDLEQIWQWNERVPEPVNRCIHDLLADQVQARPDSPAICAWDGELTYRKLDELSTRMSHSLLQLGAGFHKGLVPLCFDKSMWTAVAILGVLKAGVGFILLDPHLPEQRMRDIVDQVGSKVIVTCPTREILCSRLAEATVAISWDYFSGQLDWTQQELPSVSPSSTAYVVFTSGSTGTPKGVVVTHANAVSAQHHQLEPMGHTPESRLFDFASYSFDVSISNIVSMLACGGCLCVPSESDRTDDMEKSIVSLRVNALDLTPSTLQLLSPERLPAVRQLTLGGEPLREADVEKWCGKTRICNAYGPSECTPTATINSNAMEPQMATHIGKGAGVVTWIVDADDHDELLPLGCTGELLLEGPLVGRGYFNDSAKTAAAFIEDPKWLLRGSISHPGRQGRLYKTGDLVKYNRDGSLAFVGRKDTQVKVRGQRVEPGEIEAVLRSHESVDGAVVVFHRLTDQELWLAAFVTTREDDGKIPQSQSLAHDETQLKQKRIQAWEEEFEGETYLAIGATEAENIGRDFVGWSSMYDGSEINKVEMNEWLDDTIATMLNGGPAGHVLEIGSGSGMMLFNLANHSLQSYIGVDPAMRAVDFTTKAAKSVPDLADKVNVFKGTAEDIMNLDMPIHSELAVMNSVVQYFPSQDYLFNIIQHLASLGSIKTIFVGDIRSHALHKEFMARRALHIAGKDASREEFSGIMENLLKGEPELLVDPGFFTSLPHRIHGVTHVEILPKRMKATNELSSYRYAAVLHVNSHGEQAKDGRAQDIGADEWIDYVSNGLDRQAVSGLLGTASRVAISNIPYSKTIYEREIVNAVEASKNIPKLERESEWLAAALQASQEHSSLCAFDLAELAQLAGYRVECSWARQYSQRGGLDAVFYCGGSGTDSERRTLFRFPTDHEGRPCHVLSTNPLEQQRKSKLRGDLEQLLRSKLPSYMVPQAIKILDKMPVNHTGKIDRSMLSESLQQKAPPTARKRLPSTAPERAMQQIWSKVLSIESSQIGLDDGFIKLGGNSLSAMKVVSMAREEGIRLEVADMFHHSTTSIAHLLQTAAAGVSESGAALPGVTSDRLLSDLARYDCTIAMAQSEAANKRLSATSHGGIRDTRLTVVLTGANGFIGTQILRQLLDHGRFSRVIAIVRGTSASKARQRAIDAAKNAQWWSEFYSSELEVWRGDLALPRLGLGKENWNTLADGTVDVFIHNGASVHFMKSYSALQAANVESTAQVLRVAAENPSMRVVYVSSARCCDPELEREEDVAKALADRPNGYTTTKFIAEALVKRAAARGLGRRDQFAVVSPGLVVGTPTEGVANADDWLWRMTAACIRVGVVNGEESDNWIPIADAAATATTVIETSLGRSSGIVTQVKGGLTMGEFWETLRAIGYTLRGEDSSTCMAAIRQDVEKNRDTHPLGALSDMLQDLADTARSQWADSWRTGGLSSPARLKLALVKSAGFLSKVGVLPLPDGNDEPAQARENLRAFTRSGG", - "output": "ligase activity ; methyltransferase activity ; phosphopantetheine binding ; cellular biosynthetic process ; methylation ; organonitrogen compound biosynthetic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MEILLLAVALSMDCVALSMSNGAKCANYGIFRITKVSFVYGFFQGAMPIIGFFLGALFVGFIEQIDHFVAFAILGFLGVKMIFDSRENSDEITANLGLKELISGAVATSIDALAVGVTFSFTSLNIWFSCAIIAFVCFILSFAATFIGKKLGEIFKDKALILGGLILIFIGFKILITHLGIL", - "output": "plasma membrane ; manganese ion transmembrane transporter activity" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MSSRGHSTLPRTLMAPRMISEGDIGGIAQITSSLFLGRASVASNWHLLQARGITCVINATIEIPNFNWPQFEYVKVPLADIPHAPIRLYFDTVADKIHSVSKKHGATLVHCAAGVSRSATLCIAYLMKFHNLCLLEAYNWVKARRPVIRPNLGFWRQLIDYESQLFGKSSVKMVQTPYGIIPDVYEKESRHLMPYWGI", - "output": "cytoplasm ; nucleus ; MAP kinase tyrosine/serine/threonine phosphatase activity ; myosin phosphatase activity ; protein tyrosine phosphatase activity ; protein dephosphorylation" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MVDKRESYTKEDLLASGRGELFGAKGPQLPAPNMLMMDRVIKMSETGGNYDKGYVEAELDINPDLWFFGCHFIGDPVMPGCLGLDAMWQLVGFYLGWLGGEGKGRALGVGEVKFTGQVLPTAKKVTYRIHFKRIVNRRLIMGLADGEVLVDDRLIYTANDLKVGLFQDTSAF", - "output": "cytoplasm ; (3R)-3-hydroxydecanoyl- dehydratase activity ; (3R)-hydroxymyristoyl- dehydratase activity ; trans-2-decenoyl-acyl-carrier-protein isomerase activity ; fatty acid biosynthetic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MRKSAAPKRPVVQDPVYKSELVTQLVNKILIGGKKSTAERIVYGALEICREKTGTDPVGTLEKALGNVRPDLEVRSRRVGGATYQVPVDVRPERANTLALRWLVTFTRQRRENTMIERLANELLDAANGLGASVKRREDTHKMAEANRAFAHYRW", - "output": "small ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; tRNA binding ; translation" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MLRVESLRKVYDSGDVALDDVSLTVSGSETVAIIGPSGAGKSTLVRCINRLVEPTSGTVWLDEREVTGLPEKQLPAVRRDMGMIFQEYNLIERLTVMENVLSGRLGYVSSWKGFRRKFPQEDVDRAFEILDRVGLSGLENNRADELSGGQRQRVGIARAVIQQPKIMLVDEPTSSLDPDTSRDVMDLLTEIASDEGVPVLLNIHEVDLAVEYADRIVGLADGRIVYDGSTDGLDEGIENKIYRNGRESARSSPSSEPALSDDTELHR", - "output": "plasma membrane ; ABC-type phosphonate transporter activity ; ATP binding ; ATP hydrolysis activity" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQEFKTDLRFQSSAVMALQEAREAYLVGLFEDTNLCAIHAKRVTIMPKDIQLVSRIRGERA", - "output": "nucleosome ; nucleus ; DNA binding ; protein heterodimerization activity ; structural constituent of chromatin" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MGQFISFMQEIPIFLQEALNIALVAVSLICIVKGLVNLYRCGLFQLMVFLVLAGRSCSEETFKIGMHTQFQEVSLSLSALLTNQSHELPMLCLANKTHLYLKSGRSSFKINIDSVTVLTRSADVFVHSPKLGSCFESDEEWVVAWWIEAIGHRWDQDPGLLCRNKTKTEGKLIQINISRADGNVHYGWRLKNGLDHIYRGREEPCFEGKQCLIKIQPEDWPTDCKADHTNTFRFLSRSQKSIAVGRTLKAFFSWSLTDPLGNEAPGGYCLEKWMLVASELKCFGTLQCQVQPKSRLRVCDMLRLFDYNKNAIKTLNEETKTRVNVLSHTINALISDNLLMKNKIRELMSVPYCNYTRFWYVNHTLSGQHSLPRCWMIRNNSYLNSSEFRNEWILESDFLISEMLSKEYSERQGRTPITLVDICFWSTEFFISTLFLHLIGFPTHEHIRGEGCPLPHRLNSMGGCRCGKYLPLKKPTIWHRRH", - "output": "host cell endoplasmic reticulum membrane ; host cell Golgi membrane ; host cell plasma membrane ; membrane ; viral envelope ; virion membrane ; metal ion binding ; fusion of virus membrane with host endosome membrane ; receptor-mediated endocytosis of virus by host cell ; virion attachment to host cell" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MSLAEFDADVVINAQNCIVGRVASEVAQRALGGETVAIVNVEDAVITGSEEDVMSVYETRSELGSDQGPAYPSRPDGIFKRAVRGMLPYKSDRGREALSNVRTYVGNPYDDDGEAIDGTTLDRLSNIKFLSLGEVSANLGATVTW", - "output": "large ribosomal subunit ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MRTVVWQSLSEAQQESILERPAITEGANITAAVAQVIAKVRSEGDAALFELTEKFDRVKPASLRVSREEMDAAAARLSETMKQALEQAYNNISKFHKAQKAQPIKVETMPGVVCEQVTRPINKVGLYIPGGSAPLPSTVLMLGVPAQIAGCRKVVLCSPPPIADEILYVAKLCNIDEVYNLGGGQAIAAMAYGTETVTKVDKIFGPGNAYVTEAKRQVSNDFRGAAIDMPAGPSEVLVIADETADANFIAADLLSQAEHGPDSQVVLVTPSPVLADQVTDAVQKQLKVLSRASIAEKALASSLIIIAESLTQAVSISNYYGPEHLIVQTRNPRELVPLLDNAGSIFLGDWSPESVGDYASGTNHVLPTYGYTRTYSSLGLADFSKRMTVQELTADGLQLLAPTVVTMAEAEGLDAHKRAVTIRVEKLQKAQ", - "output": "cytoplasm ; cytosol ; histidinol dehydrogenase activity ; NAD binding ; zinc ion binding ; histidine biosynthetic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MKTYYEKDANVELLKGKTVAVIGYGSQGHAQAQNLRDSGVEVVVGVRPGKSFEVAKTDGFEVMSVSEAVRTAQVVQMLLPDEQQAHVYKAGVEENLREGQMLLFSHGFNIHFGQINPPSYVDVAMVAPKSPGHLVRRVFQEGNGVPALVAVHQDATGTALHVALAYAKGVGCTRAGVIETTFQEETETDLFGEQTVLCGGVTALVKAGFETLTEGGYRPEIAYFECLHELKLIVDLMYEGGLTNMRHSISDTAEFGDYVTGSRIVTDETKKEMKRVLTEIQQGEFAKKWILENQAGRPTYNAMKKAEQNHQLEKVGAELREMMSWIDAPKELVKK", - "output": "ketol-acid reductoisomerase activity ; magnesium ion binding ; NADP binding ; isoleucine biosynthetic process ; valine biosynthetic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MIESDSDTSDDAPQEYVSASANIPAQFELATAHMKATPEPQPTQQPDAEALHDDDPLTTTQDHPTGPSATASDTIDSTPQPMAPATLSASAVLPSLPSDTAALLETFSQQLQQSNVKCQLKFRPIGGATPSLKQSVYKIAETQQFGVVVKFLRKQLKIKNSQSSQIFCYISSFAPGLDETVGSLYNRYAIRGELTISYCLNQAFG", - "output": "Atg12-Atg5-Atg16 complex ; phagophore assembly site membrane ; autophagosome assembly ; autophagy of mitochondrion ; autophagy of nucleus ; C-terminal protein lipidation ; protein transport" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MTFSVDKVRADFPVLSREVNGLPLAYLDSAASAQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFINARSAEELVFVRGTTEGINLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPTLFDEKTRLLAITHVSNVLGTENPLAEMITLAHQHGAKVLVDGAQAVMHHPVDVQALDCDFYVFSGHKLYGPTGIGILYVKEALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQNRLGVIAFNLGKHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVTGLQRIHRLLG", - "output": "cytoplasm ; cysteine desulfurase activity ; pyridoxal phosphate binding ; selenocysteine lyase activity ; cysteine metabolic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MQDLIKRTLPQDDALNQAIVNDLRSQNWAGFLNYSQVQQLCHNFELTTLKLAMHLLPLAASYSHTAISHFNVGAIAIGEQGDFYFGANQEFANSAIQQTIHAEQSAISHAWLRNERRISDMVVNYTPCGHCRQFMNELHGAEKISIHLPHSQNNPLHSYLPDAFGPKDLDIAAHLLAEENHDLVADHQDDLVNQAILAANQSHCPYSNSPHGIAILFKNSDVVTGRYAENAAFNPSLPALQTALNFAYLNDKKLSDIERIVMAEKALKLSHKTMAETLLSTLTSVELEYYSL", - "output": "cytosol ; cytidine deaminase activity ; deoxycytidine deaminase activity ; zinc ion binding ; cytidine deamination" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MGRDTIADIITSIRNVDMDRKVTVRIASTNITENIVKILLREGFIENVRKHQESNKYFLVLTLRHRRNRKGTYRTILNLKRISRPGLRIYSNYQRIPRILGGMGIVILSTSRGIMTDREARLERIGGEILCYIW", - "output": "chloroplast ; ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MWQAQIFTLYPDFFPGPLNKGLYGKALTNKIWDLKVVNFREAAEDKHKTVDDTPFGGGSGMLLKADILAKSLDENKKEGERIFYLSPKGKKLDQKLALELSKEKSISLICGHFEGVDERLLSTRNIEELSIGDFILSGGETAAFVVLDSVLRLLPGVLGNEQSKNDESFENGLLEYPQYTKPQIWEEKSVPEVLLSGDHNKIKDWRLSQSEAITRVRRPDLWEKYKKN", - "output": "cytoplasm ; tRNA (guanine(37)-N(1))-methyltransferase activity" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MELTTRTLPTRKHIALVAHDHCKQMLMNWVERHQPLLEKHVLYATGTTGNLIQRATGMDVNAMLSGPMGGDQQVGALISEGKIDVLIFFWDPLNAVPHDPDVKALLRLATVWNIPVATNVSTADFIIQSPHFNDAVDILIPDYARYLAERLK", - "output": "methylglyoxal synthase activity ; methylglyoxal biosynthetic process" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MATVERRVQVDPTDKRIHLQPQYEGDVGYGYGYGGRADYKSSGPSSNQIVALIVGVPVGGSLLALAGLTLAGSVIGLMLSVPLFLLFSPVIVPAAITIGLAVTAILASGLFGLTGLSSVSWVLNYLRGTSDTVPEQLDYAKRRMADAVGYAGQKGKEMGQYVQDKAHEAHDTSLTTETTEPGKTRRHT", - "output": "membrane ; monolayer-surrounded lipid storage body ; post-embryonic development ; reproductive structure development" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MFFEILIGASAKAVKDFISHCYSRLKSIYYSFKRWLMEISGQFKAHDAFVNMCFGHMADIEDFEAELAEEFAEREDEVEEARSLLKLLVAQKSKTGVTEAWTDFFTKSRGGVYAPLSCEPTRQELEAKSEKLEKLLEEQHQFEVRAAKKYIKEKGRGFINCWNDLRSRLRLVKDVKDEAKDNARAAAKIGAEMFAPVDVQDLYSFTEVKKVETGLMKEVVKERNGEEEKHLEPIMEEVRSIKDTAEARDAASTWITETVKLKNSTLNADELSLATIARYVENVGDKFKLDIASKTYLKQVASMSVPIPTNKDIKLKMVLQSPEARARREPLDVLDSVGFLEGLCTASGFESPFPILGLPEIAVTDGARLRKVSSNIRYLSQTHLGLVYKAPNASLHNALVAVERRVFTVGKGDKAIYPPRPEHDIFTDTMDYFQKSIIEEVGYCRTYPAQLLANSYSAGKRAMYHKAIASLRTVPYHQKDANVQAFLKKEKHWMTKDIAPRLICPRSKRYNIILGTRLKFNEKKIMHAIDSVFGSPTVLSGYDNFKQGRIIAKKWQKFACPVAIGVDASRFDQHVSEQALKWEHGIYNGIFGDSELALALEHQITNNIKMFVEDKMLRFKVRGHRMSGDINTSMGNKLIMCGMMHAYFKKLGVEAELCNNGDDCVIITDRANEKLFDGMYDHFLQYGFNMVTEKPVYELEQLEFCQSKPVSINGKYRMVRRPDSIGKDSTTLLSMLNQSDVKSYMSAVAQCGLVLNAGVPILESFYKCLYRSSGYKKVSEEFIKNVISYGTDERLQGRRTYNETPITNHSRMSYWESFGVDPKIQQIVERYYDGLTVSAQLQSVKVTTPHLQSILLSIPENHSQIEY", - "output": "nucleotide binding ; RNA binding ; RNA-dependent RNA polymerase activity ; viral RNA genome replication" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MCRAVAGVTRFVFTLALGVGSAHVTHAMKKKTSVSEQPEQRTYEVRTFGCQMNVHDSERLSGLLEDSGYQPAANGEEPDVLVFNTCAVRENADNRLYGTLAMVKPMKDRNPGMQIAVGGCMAQKDKDAVVDRAPWVDVVFGTHNIGSLPTLLERSAHNQRAEVEILDSLEEFPSVLPAKRESAYSGWVSVSVGCNNTCTFCIVPSLRGKEQDRRPGEILAEVQALVDQGVQEVTLLGQNVNAYGVNFADEDLPRDRGAFAKLLRACGEIEGLERLRFTSPHPAEFTDDVIDAMAETPNVCPQLHMPLQSGSDRILKEMRRSYRSKKFLGILDKVRERIPHAAITTDIIVGFPGETEEDFQATLDVVEKARFSCAFTFQYSPRPGTPAATMPDQIPKAVVQERYERLIALQERIQAEDNKELVGTTQELLVQETGGRKDAQRHRMSGRARDGRLVHFTPSEDVRPGDIVEVTITDARPFFLIADGPLVNHRLTKAGDMSGAGQTPTTAPIGVSLGVPTIGIKPQADATAAPKNVHEGCGCD", - "output": "cytoplasm ; 4 iron, 4 sulfur cluster binding ; metal ion binding ; methylthiotransferase activity ; tRNA modification" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MGGLPVSPKYVIKAKMEIKGSVEKHDIIGAIFGQAEGLLGSELDLRELQKTGRVGRIEVNTRSQDGTLVAEIEIPTNLDMAETAIIAATIESIDKVGPYPAKTEVVSIEDVRAEKRQKIIERAVELYKKLLESVPESRELVEEVLRRVRVAEIVEYGEEKLPGGPEVETSDTVILVEGRADVQNLLRHGYKNVIALGGATIPKSIKSLVENKKVILFVDGDRGGELIARNVINALKVDFVARAPPGREVEDLTAKEIARALQNKIPVDEFLQALEREKKQQKEVKAEIVVPPAKLIKSATKKNPEIAQEIVVPAEVYEKLEELKGTLEAVIYDENWQVVEKVPVRDLVNRLKEVERAAHVVLDGIITQRLVDVAYTKGLKSLIGVRIGEIIRKPDNIVLATFSSVKKSEENIQESVSTGESAQTSP", - "output": "DNA-directed RNA polymerase complex ; exosome (RNase complex) ; primosome complex ; DNA primase activity ; metal ion binding ; poly(A) binding" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPSGNYVGDSDLQLERISVYYNEASSHKYVPRAILVDLEPGTMDSVRSGAFGHLFRPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKVREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKLATPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVATVFRGRMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRGLKMSSTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEMYEDDDEESEAQGPK", - "output": "axon ; cell periphery ; cytoplasm ; dendrite ; filopodium ; growth cone ; intercellular bridge ; lamellipodium ; microtubule ; microtubule cytoskeleton ; mitotic spindle ; neuronal cell body ; GTP binding ; GTPase activity ; metal ion binding ; netrin receptor binding ; peptide binding ; structural constituent of cytoskeleton ; axon guidance ; dorsal root ganglion development ; microtubule cytoskeleton organization ; mitotic cell cycle ; netrin-activated signaling pathway ; neuron differentiation" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MTLVDRFLKYVSFDTQSDESTGLTPSTPKQMVFAEYLKTELESLGLEDITLDEHGYLFATLPANIDKKVPTIGFIAHMDTSPDMTGKDVTPRIVKGYDGTDIVLCAEENIILSPAQFPELLDHKGEDLIVTNGKTLLGADDKAGIAEIVSAIVYLKEHPEIKHGKIRIGFNPDEEIGEGAHKFDVGKFGCEWAYTMDGGEVGELEFENFNAAAAKITFKGRNVHPGYAKNKMINSIRVANQFIAMLPSTETPEQTEGYEGFYHLISIQGDVEQSTVSYIIRDHDRAKFEKRKEEIKRLVAQVNTEYGEGTATLELRDQYYNMREKIEPVMHIIDTAFAAMEAVGVKPNVKPIRGGTDGAQLSFKGLPCPNIFAGGLNFHGRYEFVPIQNMEKAMNVIVKIAELVASK", - "output": "cytosol ; metallopeptidase activity ; tripeptide aminopeptidase activity ; zinc ion binding ; peptide catabolic process ; proteolysis" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MELLCCEGTRHAPRAGPDPRLLGDQRVLQSLLRLEERYVPRASYFQCVQKEIKPHMRKMLAYWMLEVCEEQRCEEDVFPLAMNYLDRYLSCVPTRKAQLQLLGTVCLLLASKLRETTPLTIEKLCIYTDQAVAPWQLREWEVLVLGKLKWDLAAVIAHDFLALILHRLSLPSDRQALVKKHAQTFLALCATDYTFAMYPPSMIATGSIGAAVLGLGACSMSADELTELLAGITGTEVDCLRACQEQIEAALRESLREAAQTAPSPVPKAPRGSSSQGPSQTSTPTDVTAIHL", - "output": "cyclin D3-CDK4 complex ; cyclin-dependent protein kinase holoenzyme complex ; cytoplasm ; nucleoplasm ; nucleus ; cyclin-dependent protein serine/threonine kinase activator activity ; cyclin-dependent protein serine/threonine kinase activity ; cyclin-dependent protein serine/threonine kinase regulator activity ; protein kinase binding ; cell division ; G1/S transition of mitotic cell cycle ; hyaluronan biosynthetic process ; mitotic cell cycle phase transition ; negative regulation of transcription by RNA polymerase II ; positive regulation of cell population proliferation ; positive regulation of cyclin-dependent protein serine/threonine kinase activity ; positive regulation of protein phosphorylation ; regulation of cell cycle ; regulation of cell population proliferation ; regulation of cyclin-dependent protein serine/threonine kinase activity ; regulation of insulin receptor signaling pathway ; response to peptide hormone ; signal transduction ; T cell proliferation" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MHLLTLHLLLLLLGSSTKAGEIIGGTECIPHSRPYMAYLEIVTSENYLSACSGFLIRRNFVLTAAHCAGRSITVLLGAHNKTSKEDTWQKLEVEKQFLHPKYDENLVVHDIMLLKLKEKAKLTLGVGTLPLSANFNFIPPGRMCRAVGWGRTNVNEPASDTLQEVKMRLQEPQACKHFTSFRHNSQLCVGNPKKMQNVYKGDSGGPLLCAGIAQGIASYVHRNAKPPAVFTRISHYRPWINKILREN", - "output": "cytoplasm ; cytoplasmic ribonucleoprotein granule ; cytosol ; extracellular region ; extracellular space ; intracellular membrane-bounded organelle ; secretory granule ; endopeptidase activity ; peptide binding ; serine-type endopeptidase activity ; serine-type peptidase activity ; basement membrane disassembly ; cytokine precursor processing ; extracellular matrix disassembly ; positive regulation of angiogenesis ; protein catabolic process ; protein processing ; regulation of inflammatory response" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MTDNTRLRIAMQKSGRLSDDSRELLARCGIKINLHTQRLIAMAENMPIDILRVRDDDIPGLVMDGVVDLGIIGENVLEEELLNRRAQGEDPRYFTLRRLDFGGCRLSLATPVDEAWDGPLSLNGKRIATSYPHLLKRYLDQKGISFKSCLLNGSVEVAPRAGLADAICDLVSTGATLEANGLREVEVIYRSKACLIQRDGEMEESKQQLIDKLLTRIQGVIQARESKYIMMHAPTERLDEVIALLPGAERPTILPLAGDQQRVAMHMVSSETLFWETMEKLKALGASSILVLPIEKMME", - "output": "cytoplasm ; ATP binding ; ATP phosphoribosyltransferase activity ; magnesium ion binding ; histidine biosynthetic process" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MSVGTVLLTALLALVGYLLMKWRSTMRHWQDLGIPCEEPHILMGSMKGVRTARSFNEIWTSYYNKFRGSGPFAGFYWFRRPAVFVLETSLAKQILIKEFNKFTDRGFFHNPEDDPLSGQLFLLDGQKWRTMRNKLSSTFTSGKMKYMFPTVVKVANEFTDVFGQNVAKSPVVEVRELLARFTTDVIGTCAFGIECSSLKDPDAEFREMGRRSLTEQRLGPVGIGFVNSFPNLARRLHMKMTAEPIERFFMRIVRETVAFREQNNIRRNDFMDQLIDLKNKPLMVSQSGESVNLTIEEIAAQAFVFFAAGFETSSTTMGFALYELAQNQDIQNRVRKECQEVIEKCNGELNYESMKDLVYLDQVVSETLRLYTVLPVLNRECLEDYEVPGHPKYVIKKGMPVLIPCGAMHRDEKLYANPNTFNPDNFSPERVKERDSVEWLPFGDGPRNCIGMRFGQMQARIGLALLIKDFKFSVCEKTTIPMTYNKEMFLIASNSGIYLKAERV", - "output": "endoplasmic reticulum membrane ; heme binding ; iron ion binding ; monooxygenase activity ; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MSLLCVRVKRAKFQGSPDKFNTYVTLKVQNVKSTTVAVRGDQPSWEQDFMFEISRLDLGLSVEVWNKGLIWDTMVGTVWIALKTIRQSDEEGPGEWSTLEAETLMKDDEICGTRNPTPHKILLDTRFELPFDIPEEEARYWTYKWEQINALGADNEYSSQEESQRKPLPTAAAQCSFEDPDSAVDDRDSDYRSETSNSFPPPYHTASQPNASVHQFPVPVRSPQQLLLQGSSRDSCNDSMQSYDLDYPERRAISPTSSSRYGSSCNVSQGSSQLSELDQYHEQDDDHRETDSIHSCHSSHSLSRDGQAGFGEQEKPLEVTGQAEKEAACEPKEMKEDATTHPPPDLVLQKDHFLGPQESFPEENASSPFTQARAHWIRAVTKVRLQLQEIPDDGDPSLPQWLPEGPAGGLYGIDSMPDLRRKKPLPLVSDLSLVQSRKAGITSAMATRTSLKDEELKSHVYKKTLQALIYPISCTTPHNFEVWTATTPTYCYECEGLLWGIARQGMRCSECGVKCHEKCQDLLNADCLQRAAEKSCKHGAEDRTQNIIMAMKDRMKIRERNKPEIFEVIRDVFTVNKAAHVQQMKTVKQSVLDGTSKWSAKITITVVCAQGLQAKDKTGSSDPYVTVQVSKTKKRTKTIFGNLNPVWEEKFHFECHNSSDRIKVRVWDEDDDIKSRVKQRLKRESDDFLGQTIIEVRTLSGEMDVWYNLEKRTDKSAVSGAIRLQISVEIKGEEKVAPYHVQYTCLHENLFHYLTDIQGSGGVRIPEARGDDAWKVYFDETAQEIVDEFAMRYGIESIYQAMTHFACLSSKYMCPGVPAVMSTLLANINAYYAHTTASTNVSASDRFAASNFGKERFVKLLDQLHNSLRIDLSTYRNNFPAGSPERLQDLKSTVDLLTSITFFRMKVQELQSPPRASQVVKDCVKACLNSTYEYIFNNCHDLYSRQYQLKQELPPEEQGPSIRNLDFWPKLITLIVSIIEEDKNSYTPVLNQFPQELNVGKVSAEVMWHLFAQDMKYALEEHEKDHLCKSADYMNLHFKVKWLHNEYVRDLPVLQGQVPEYPAWFEQFVLQWLDENEDVSLEFLRGALERDKKDGFQQTSEHALFSCSVVDVFTQLNQSFEIIRKLECPDPSILAHYMRRFAKTIGKVLMQYADILSKDFPAYCTKEKLPCILMNNVQQLRVQLEKMFEAMGGKELDLEAADSLKELQVKLNTVLDELSMVFGNSFQVRIDECVRQMADILGQVRGTGNASPDARASAAQDADSVLRPLMDFLDGNLTLFATVCEKTVLKRVLKELWRVVMNTMERMIVLPPLTDQTGTQLIFTAAKELSHLSKLKDHMVREETRNLTPKQCAVLDLALDTIKQYFHAGGNGLKKTFLEKSPDLQSLRYALSLYTQTTDTLIKTFVRSQTTQGSGVDDPVGEVSIQVDLFTHPGTGEHKVTVKVVAANDLKWQTAGMFRPFVEVTMVGPHQSDKKRKFTTKSKSNNWAPKYNETFHFLLGNEEGPESYELQICVKDYCFAREDRVLGLAVMPLRDVTAKGSCACWCPLGRKIHMDETGLTILRILSQRSNDEVAREFVKLKSESRSTEEGS", - "output": "cytosol ; Golgi apparatus ; membrane ; neuromuscular junction ; plasma membrane ; presynaptic active zone ; presynaptic active zone cytoplasmic component ; presynaptic membrane ; synaptic vesicle membrane ; terminal bouton ; calcium ion binding ; calmodulin binding ; diacylglycerol binding ; GTP-dependent protein binding ; phospholipid binding ; small GTPase binding ; syntaxin-1 binding ; acrosomal vesicle exocytosis ; cellular response to glucose stimulus ; chemical synaptic transmission ; dense core granule priming ; neuromuscular junction development ; neuronal dense core vesicle exocytosis ; positive regulation of apoptotic process ; positive regulation of inhibitory postsynaptic potential ; positive regulation of protein secretion ; positive regulation of synaptic vesicle priming ; presynaptic dense core vesicle exocytosis ; synaptic transmission, glutamatergic ; synaptic vesicle docking ; synaptic vesicle maturation ; synaptic vesicle priming" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MAAQPLRHRSRCATPPRGDFCGGTERAIDQASFTTSMEWDTQVVKGSSPLGPAGLGAEEPAAGPQLPSWLQPERCAVFQCAQCHAVLADSVHLAWDLSRSLGAVVFSRVTNNVVLEAPFLVGIEGSLKGSTYNLLFCGSCGIPVGFHLYSTHAALAALRGHFCLSSDKMVCYLLKTKAIVNASEMDIQNVPLSEKIAELKEKIVLTHNRLKSLMKILSEVTPDQSKPEN", - "output": "Cajal body ; chromatin ; chromocenter ; chromosome, centromeric region ; intracellular membrane-bounded organelle ; nuclear speck ; nucleoplasm ; nucleus ; identical protein binding ; metal ion binding ; cell communication ; cell division ; CENP-A containing chromatin assembly ; chromosome segregation" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MIQEQTYLKVADNSGGKIVKCIKVLNGTNKKYANIGEIIKVVVKTANFKSKIKKSQVLKAMIIRSKTGIKRLDGTIIKFNDNSVILLNNNEQIISTRVFGIILRELKNEKFAKLISLSNEII", - "output": "large ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MSLINKEILPFTAQAFDPKKDQFKEVTQEDLKGSWSVVCFYPADFSFVCPTELEDLQNQYEELQKLGVNVFSVSTDTHFVHKAWHDHSDAISKITYTMIGDPSQTITRNFDVLDEATGLAQRGTFIIDPDGVVQASEINADGIGRDASTLAHKIKAAQYVRKNPGEVCPAKWEEGAKTLQPGLDLVGKI", - "output": "cytoplasm ; NADH-dependent peroxiredoxin activity ; response to oxidative stress" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MADEESSSSSLLSKDLKLPPKTARDIGSVDIKEDEDPFGEISTDARARQRLVSEGSTTAEAEEKDLKETCRVAFDKITQYLNGELTASLEDYTLLEQLNNLTTDKYKEMSTMTKSLITTMEKLDDKYKSLQPYLEQIDRIEDSVSSLEQAAYRLDAYSKKLENKFKRLERR", - "output": "BLOC-1 complex ; BORC complex ; gamma-tubulin complex ; lysosomal membrane ; gamma-tubulin binding ; endosomal transport ; lysosome localization" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MTTETLTQLEQHELFLRRHIGPGADQQQEMLNFVGAESLEDLTAQIVPGAILLNRDLAVGDSCGEAEGLAYIRKIADKNKVFKSYIGMGYHGTEVPSVIQRNVLENPGWYTAYTPYQPEIAQGRLEAILNFQQVSMDLTGLDLASSSLLDEATAAAEAMALSKRVSKAKKANIFFVADDVFPQTIDVIKTRAECFGFEVVVGPAEEAVNYELFGALFQYTNRVGQICDHTELFAKLHEKKALVSVAADIMSLVVLKSPGSMGADVVLGNSQRFGVPMGFGGPHAAFFVTRDEYKRSLPGRIIGVSQDTRGNRALRMAMQTREQHIRREKANSNICTAQVLLANMASFYAVFHGPQGLKVIAERIHRLTDIVAAALTAKGVELVNNTWFDTLSIKGLDVTAVQARALATGLNLRIDSDGVIGVSLSETTTRSDVAELFDVLLGEGHGQDAAALDAAIIANGSSSIPSELVRKDAILTHPTFNRYQSETEMMRYIKRLENKDLALNHSMISLGSCTMKLNAATEMAPITWPEFGNMHPFCPQDQAQGYAQLLEELSTWLVDITGYDAVSLQPNSGAQGEYAGLLAIKQYHESRGDAHRNICLIPQSAHGTNPASAQLAGMKIVVTACDKAGNIDMADLKAKAAEVADNLSCIMVTYPSTHGVYEETIGEICEVIHQHGGQVYLDGANMNAQVGLTSPGFIGADVSHLNLHKTFAIPHGGGGPGMGPIGVKKHLAPFLSGHSVVKHGLESDNNGAVSAAPFGSAGILPITWMYIKLLGKKGLRQSTQVALLNANYVMKKLSAHYPVLYTGRNDRVAHECIIDLRPLKEASGVTEMDIAKRLNDYGFHAPTMSFPVAGTLMIEPTESESKVELDRFIEAMVSIRGEIAKVEAGEWPVDNNPLHNAPHTLADIMDPAFDSRPYSREEAVFPTNAVKANKFWPTVNRIDDVYGDRNLMCSCAPVSDYE", - "output": "glycine dehydrogenase (decarboxylating) activity ; glycine decarboxylation via glycine cleavage system" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MASASTSSSNESESQSVLTWEQVSRLNDVLTEAVPVHGRGNFPTLEVRLKDIVQMVRNRLELRGIMVKDVRLNGSTASHVLVQDIGWSYKDLDVIFRVDLPREEEFQLIKDVVLSTLLDFLPEGVNKEKITPMTLKEAYVQKLVKVYTDQDRWSLISLSNNNGRNVELKFVDSIRRQFEFSVDSFQIILDSVLSYYDLSENPMSQHFHPTVVGESMYGDFVEALGHLTNKTIATKRPEEIRGGGLLKYCNLLVREFKPTDPDEFKALERYMCSRFFIDFPDIVEQQRKLEAYLQSHFIGEERNKYNYLMILRRVVNESTVCLMGHERRQTLNLISLTAFRVLAEQNAIPDVSSVTCYYQPAPYVKDLNFNNYYVASCNQSIPTWLPCN", - "output": "centrosome ; cytoplasm ; nucleus ; polynucleotide adenylyltransferase activity ; RNA adenylyltransferase activity ; RNA binding ; mRNA stabilization ; negative regulation of cell differentiation" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MFDIQEELKKLPDKPGVYIMKDENGEIIYVGKAVVLKNRVRQYFQSLSNQTPKVRAMVAHIKEFEYIVTDTELEALILECNLIKKHRPKFNILLKDDKNYPYIKVTMNEDFPRILMTRRVEKDGAKYFGPYTSAYAVRETIDLVKKLFPVKTCSKVLPRDIGKGRPCLNYHIYQCLGPCQGNVSKEEYRFMMQDVCNFLGGRQEDIIKKLEKDMKEAADNLEFERAARIRDKINSLKHIAEKQKIISTAMEDQDVIAFAKSETDSCIQVFFIRGGKLIGREHFILEGTSDVSDSELMTAFVKQFYSSAAYVPGQIILQEDIDEMEIIEKWLSGKRGTKTYIKVPRRGEKLKLVEMVSKNALIELNQFKERIKKEAALAKEGMEKLKELLNLDRLPRRIEAYDISNTGSTEIVGSMVVFENGSPKKSDYRRFKIKSINVQNDYQSMQEVIFRRLKRAQKEMTEKDEGGGKDVGEKGAGFGTLPDVLLVDGGTGHVNAVRSVLEELDFNIPVYGMVKDDNHRTRGLVTGEREFDLSKDIVLLRFVTAIQDEAHRFALEYNRKLRAKRYSGSVLDNIEGVGPKRKKELIRHFGSVKAIKEAEPGEIAKVKGISRDLAQKIYDYFRQQE", - "output": "cytoplasm ; excinuclease repair complex ; DNA binding ; excinuclease ABC activity ; nucleotide-excision repair ; SOS response" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MLITFEGIDGAGKSTQVAKLVAYLKQQSTPLLSLREPGGTPTAESIRSLLLDNRKSITPIAELLLFSASRAELVETLIRPALAEGKTVILDRFFDSTTAYQGHGRGISLEQLHSIIALSTGDLLPDVTFYLDLEPEEALRRAFSRSGLPLDFAAQSNESDRMEQAGIAFYHKVRNGYLTLMQQHPSRFVALDATQPPDTLHQHIIAEVETRLKLHISPLVAP", - "output": "ATP binding ; thymidylate kinase activity ; dTDP biosynthetic process ; dTTP biosynthetic process ; phosphorylation" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MRILLTNDDGIHAPGIHALWRIFDDWADIFVVAPDTERSATGHGITVHQPLRVEKLSFANPHCHGWAVNGTPADCVKLAMEELLAEPPHIVISGINRGPNLGTDVLYSGTVSAAMEGVIYGVPSIAVSVTGWHTADYTVAAETTRLLCEKLVARGLTPDTFLNVNVPDLPRERIAGIQVTKLGSRRYQNIFDKRTDPRGRTYYWMAGEVHDVDAGEGTDISAVNAGAISVTPIHFDLTNYSLIQEVSDWLGGGSSPFADRNKKDDVETKRKA", - "output": "cytoplasm ; metal ion binding ; nucleotide binding ; XMP 5'-nucleosidase activity" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MSTEVNANQSPNAESRQEAARSGERDKALNLVLGQIERNFGKGSIMRLGDASRMRVETISTGALTLDLALGGGYPKGRVVEVYGPESSGKTTLTLHAIAEVQRRGGVAAFVDAEHALDPVYAASLGVDVENLLVSQPDTGEMALEIVDQLIRSAAVELVVVDSVAALTPRAEIEGEMGDHVIGSQARLMSQAMRKITGNIGKSGCTVIFLNQLRLKIGVTYGNPETTTGGNALKFYASVRLDIRRIQTLKRGTDEYGIRAKVKVAKNKVAPPFRIAEFDILFGKGISTIGCLLDLAEETNIVARKGAWYSYEGDNIGQGRDNTITWLEQNTEAKEKIEKLVRQKLTEGSEVSSNSMRPLTTANRKAA", - "output": "cytoplasm ; ATP binding ; ATP-dependent DNA damage sensor activity ; damaged DNA binding ; single-stranded DNA binding ; DNA recombination ; DNA repair ; SOS response" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MGDGALIVAVAIKGNNSKTKGVVRWALQEFASQEHVVFKLLHVQPRDSNSVSTTRKDLTTSVYKKDVDRKTREMLLPSRDMFVHREVQLDIMVLESDDIADAISKAVQDHGISELVIGASSSIIFSWKLKRSNLSSRIADATPRFCSVHVISKGKLLNVRKSDMDTETSIADDRSESRFSSDSHSGTVSSTSSHQFSSTPLLFQRIQALTTVNQKVGTNIGKQNNEPHHHHHNRAGSLDVDESKLLNQKGFYRTSSSGIGYGGSDISSWRSSQMEEASSSSTYSDPTSSSSQIHKDFELEKLKIELRHIKGMYAVAQSEVIDASKKMQDLNQRRSEEATRLKNLTIREEEADEVVEMERERQEDAENEAELVRECIERETEERLEAEARAEEVRKEKQRLEDALEGGPLQRQQYMKFEWEEIVEATSSFSDELKIGVGGYGSVYRCNLHHTTVAVKVLHSDKSSLTKQFHQELEILSKIRHPHLLLLLGACPERGSLVYEYMHNGSLEERLMKRRPNVDTPQPPPLRWFERFRIAWEIASALYFLHTNEPRPIVHRDLKPANILLDRNNVSKIGDVGLSKMVNLDPSHASTVFNETGPVGTFFYIDPEYQRTGVVTPESDIYAFGIILLQLVTARSAMGLAHSIEKALRDQTGKFTEILDKTAGDWPVKEAKEMVMIGLRCAEMRKRDRPDLGKEILPVLERLKEVASIARNMFADNLIDHHHNAPTHFYCPITKDVMENPCVASDGYTYEKRAIKEWLQKNHKSPMTDLPFPSDSLLPNHSLLSAIKEWRSQLIK", - "output": "chloroplast ; ATP binding ; protein serine kinase activity ; protein serine/threonine kinase activity ; ubiquitin-protein transferase activity ; protein phosphorylation ; protein ubiquitination" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MKLLVEKTNEKAIIPFQAHEGDAGMDLFSVEEITLKPMERKLIHTGIKIQLPKDTEAQIRPRSGLALKHGITVLNTPGTIDEGYRGEIGIILINLGSEEFKVEEGMKIAQMVIKPTLTLKVEEVVELTETTRGENGFGSTGV", - "output": "dUTP diphosphatase activity ; magnesium ion binding ; dUMP biosynthetic process ; dUTP catabolic process" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MLYNLLLPHIHNSHIANLFHYITFRSGLAIIITLSLSFITGPILIKFLRSLQKNGQPIRSDGPESHQTKVGTPTMGGIMIILSSCLSTLLLADLTNKYTWITLFGFISFGIIGFMDDYAKVTKNNHYGVRGKSKLLLQGIISFIICVLLEYLDKSPSHLLNVPFFKNLSLDLGYFYIVFAIFVIVGSSNAVNLTDGLDGLATVPIAFTAGSFALISYLVGNLIYSNYLQLTYIPNTGELTVLCAGLVGSCLGFLWFNAQPAEVFMGDTGSLSLGGVLGIISVITKHEIVLAIVGGLFVIETASVILQVYYFKATKGKRIFKMAPLHHHFEKHGWAESKVVIRFWIISVIFALIGLSSLKLR", - "output": "plasma membrane ; metal ion binding ; phospho-N-acetylmuramoyl-pentapeptide-transferase activity ; UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate transferase activity ; cell cycle ; cell division ; cell wall organization ; peptidoglycan biosynthetic process ; regulation of cell shape" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MKKIEAWLSKKGLKNKRTLIVVIAFVLFIIFLFLLLNSNSEDSGNITITENAELRTGPNAAYPVIYKVEKGDHFKKIGKVGKWIEVEDTSSNEKGWIAGWHTNLDIVADNTKEKNPLQGKTIVLDPGHGGSDQGASSNTKYKSLEKDYTLKTAKELQRTLEKEGATVKMTRTDDTYVSLENRDIKGDAYLSIHNDALESSNANGMTVYWYHDNQRALADTLDATIQKKGLLSNRGSRQENYQVLRQTKVPAVLLELGYISNPTDETMIKDQLHRQILEQAIVDGLKIYFSA", - "output": "extracellular region ; N-acetylmuramoyl-L-alanine amidase activity ; cell wall organization ; peptidoglycan catabolic process" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MRLEDLQEELKKDVFIDSTKLQYEAANNVMLYSKWLNKHSSIKKEMLRIEAQKKVALKARLDYYSGRGDGDEFSMDRYEKSEMKTVLSADKDVLKVDTSLQYWGILLDFCSGALDAIKSRGFAIKHIQDMRAFEAGK", - "output": "DNA binding ; DNA biosynthetic process ; DNA recombination" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "WIMGHMVNAIYQIQEFVALGANSIEFDINFDTDANPIYTYHGVPCDCFRSCLHYEYFSDFLKALREHTLPGNPKYKENLVLFVFDLKTNSLYDSQAYAAGQKLAENIFQYYWANGEGMPVSGYLVLSIPNLQHYDLIKGFRETIKAKGHSELLNRVGYDFSANDNIPDVENAYKKVGIVNHVWQSDGITNCISRGLTRAKEAVSERDGGGVINKVYVWTIDKYQSMRDALDAGVDGIMTNYPDVLVEVLKEDAYKDRFRLARNYDDPFETFKV", - "output": "extracellular region ; lyase activity ; metal ion binding ; phosphoric diester hydrolase activity ; toxin activity ; killing of cells of another organism ; lipid catabolic process" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MRANVLKRKLSLRIKRKKRIRAKISGTQALPRISVFKSNRTLYIQAIDDVKAVTLAAVDGRKIGVKANKEGAKKIAAEFAKALKAKNIEEAVFDRNGYLYHGVIAVLAEALRENGIKL", - "output": "cytoplasm ; ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MPITSSPDLFYLNDCDVVYWYDLTRLVCHYVNLTERDLLANEREKFLTSLDLLTAQITYVYMLFRNLRLVEDSFKKTLKKLIYTLSRFSINANIWFHSTLFEEREAIASQKDPERRSPLLQSILGTFQKFHFLLRLLHFLSNPNELTILPQLTPRFFKDSFNTISWNNPFLRKRLNQHMSHDLPRQMIKAVAGASGIVAENIDEIPASKQGTSCSSETSHHSPSAPFQRRRRGTIFSNVSGSSDESDTIWSKRKKPYPLNEETLSLVRARKKQLDGKLKQMIKSANEYLSNTANFSKMLNFEMNFKTYEEVSGTIPIIDILENLDLTIFLNLRELGDENRVFDEDVAIDDEDEEFLKHSLSSLSYILSDYFNMKQYFHDVVVKFIIVAQHLTLEDPFVFSPMQNDLPTGYYEPMKPSSLNLDNAKDKKNGSQNTDIQEEEDEYEPDPDSLILFHNLINQDSDFNDLKFFNLAHVFKKSCDDYFDVLKLAIEFVNQLILERENLLNYAARMMKNNITELLLRGEEGYGSYDGGETAEKSDTNAVYADSDTKDNDEWRDSQVKLPRYLQREYDSELIWGSNNRIKGGSKHALISYLTDNEKKDLFFDITFLITFRSIFTTTEFLSYLISQYNLDPPEDLCFEEYNEWVTKKLIPVKCRVVEIMTTFFKQYWFLGYDEPDLATLNLDYFAQVAIKENITGSVELLKEVNQKFKHGNIQEATAPMKTLDQQICQDHYSGTLYSTTESILAVDPVLFATQLTILEHEIYCEITIFDCLQKIWKNKYTKSYGASPGLNEFISFANKLTNFISYSVVKEADKSKRAKLLSHFIFIAEYCRKFNNFSSMTAIISALYSSPIYRLEKTWQAVIPQTRDLLQSLNKLMDPKKNFINYRNELKSLHSAPCVPFFGVYLSDLTFTDSGNPDYLVLEHGLKGVHDEKKYINFNKRSRLVDILQEIIYFKKTHYDFTKDRTVIECISNSLENIPHIEKQYQLSLIIEPKPRKKVVPNSNSNNKSQEKSRDDQTDEGKTSTKKDRFPKFQLHKTKKKAPKVSK", - "output": "membrane ; guanyl-nucleotide exchange factor activity ; cell cycle ; cell division ; Ras protein signal transduction" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MSQITIALTKGRIEKDTVKLLTQAGFDMSFMADKGRSLIFESPDSRFRFLLVKGPDVTTYVRHGVADLGIVGKDILFEHPTGYLELLDLNFGLCKFSLASVPSYDPHDHKRKRIATKYPTVATDYFNQKGEDVEIISIQGSVEISPVLGLADAIVDIVETGHTLSANGLLVFEDICRVSARLIANQASLKNNPDIMPFVAKIESLVGRREVAFK", - "output": "cytoplasm ; ATP binding ; ATP phosphoribosyltransferase activity ; histidine biosynthetic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MSAGGPRVGSVSVDSYLFSLPLVALNVGVRRRLSLFLNPRTTAAADWTSLAEEMGFEYLEIREFETRPDPTRSLLDAWQGRSGSSVGRLLELLALLDREDILYELKDRIEEDCQKYIRNQQKQESEKPLQVARVESSVPQTKELGGITTLDDPLGQTPELFDAFICYCPSDIEFVQEMIRQLEQTDYRLKLCVSDRDVLPGTCVWSIASELIEKRCRRMVVVVSDDYLQSKECDFQTKFALSLSPGVQQKRLIPIKYKAMKKDFPSILRFITICDYTNPCTKSWFWTRLAKALSLP", - "output": "cell surface ; cytoplasm ; cytosol ; extrinsic component of cytoplasmic side of plasma membrane ; nucleus ; plasma membrane ; postsynaptic density ; protein-containing complex ; ATP-dependent histone chaperone activity ; identical protein binding ; interleukin-1 receptor binding ; kinase activator activity ; molecular adaptor activity ; protein self-association ; signaling receptor binding ; TIR domain binding ; Toll binding ; Toll-like receptor binding ; 3'-UTR-mediated mRNA stabilization ; apoptotic process ; cell surface receptor signaling pathway ; cellular response to mechanical stimulus ; cellular response to organic substance ; cellular response to oxidised low-density lipoprotein particle stimulus ; cytokine-mediated signaling pathway ; defense response to bacterium ; defense response to Gram-positive bacterium ; defense response to virus ; establishment of endothelial intestinal barrier ; gene expression ; histone methylation ; I-kappaB kinase/NF-kappaB signaling ; immunoglobulin mediated immune response ; induced systemic resistance ; inflammatory response ; innate immune response ; interleukin-1-mediated signaling pathway ; JNK cascade ; leukocyte activation involved in inflammatory response ; lipopolysaccharide-mediated signaling pathway ; microglia differentiation ; MyD88-dependent toll-like receptor signaling pathway ; neurogenesis ; neutrophil activation involved in immune response ; neutrophil-mediated killing of bacterium ; phagocytosis ; positive regulation of chemokine production ; positive regulation of cytokine production involved in inflammatory response ; positive regulation of gene expression ; positive regulation of I-kappaB kinase/NF-kappaB signaling ; positive regulation of interleukin-1 beta production ; positive regulation of interleukin-17 production ; positive regulation of interleukin-23 production ; positive regulation of interleukin-6 production ; positive regulation of interleukin-8 production ; positive regulation of JNK cascade ; positive regulation of lymphocyte proliferation ; positive regulation of macrophage cytokine production ; positive regulation of NF-kappaB transcription factor activity ; positive regulation of NLRP3 inflammasome complex assembly ; positive regulation of smooth muscle cell proliferation ; positive regulation of transcription by RNA polymerase II ; positive regulation of tumor necrosis factor production ; positive regulation of type I interferon production ; regulation of cell population proliferation ; regulation of chemokine (C-X-C motif) ligand 1 production ; regulation of chemokine (C-X-C motif) ligand 2 production ; regulation of gene expression ; regulation of inflammatory response ; regulation of interleukin-6 production ; regulation of neutrophil migration ; regulation of tumor necrosis factor production ; response to amine ; response to amino acid ; response to ethanol ; response to interleukin-1 ; response to lipopolysaccharide ; response to molecule of fungal origin ; response to organic cyclic compound ; response to organonitrogen compound ; response to peptidoglycan ; response to virus ; skin development ; Toll signaling pathway ; toll-like receptor 4 signaling pathway ; toll-like receptor 8 signaling pathway ; type I interferon-mediated signaling pathway" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MTPLQILISNDDGVLAEGVRCLAAAAASRGHRVTVVCPDHERSATGHGLTIHTPIRAERVDELYGPGVKAWSCSGTPADCVKLALSELLAEKPDLVLSGVNHGPNLGTDVFCSGTVAAAMEGTLEGLPALAVSVACFQWRDFQAAAQLAMDVAENALADHWPNNLLLNLNIPPCHLEQMGSLRWTRLSIRHYEEQFSRRVDPHSRTYFWLAGEVVKDLETAGDGPRDWPSDVAQIETNSPSLTPIQPDLFWRGDLSALPAACVANQPVR", - "output": "cytoplasm ; metal ion binding ; nucleotide binding ; XMP 5'-nucleosidase activity" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MGKAAAVGTAVVVAAAVGVAVVLARRRRRRDLELVEGAAAERKRKVAAVIEDVEHALSTPTALLRGISDAMVTEMERGLRGDSHAMVKMLITYVDNLPTGNEQGLFYALDLGGTNFRVLRVQLGGKEKRVVQQQYEEVSIPPHLMVGTSMELFDFIASALSKFVDTEGDDFHLPEGRQRELGFTFSFPVSQTSISSGTLIKWTKGFSINDAVGEDVVSELGKAMERQGLDMKIAALVNDTVGTLAGGRYADNSVVAAIILGTGTNAAYVENANAIPKWTGLLPRSGNMVINTEWGSFKSDKLPLSEFDKAMDFESLNPGEQIYEKLISGMYLGEIVRRILLKLAHDAALFGDVVPSKLEQPFVLRTPDMSAMHHDSSHDLKTVGAKLKDIVGVPDTSLEVRYITSHICDIVAERAARLAAAGIYGVLKKLGRDKMPKDGSKMPRTVIALDGGLYEHYKKFSSCLESTLTDLLGDDVSSSVVTKLANDGSGIGAALLAASHSQYAEID", - "output": "chloroplast outer membrane ; cytosol ; mitochondrion ; ATP binding ; fructokinase activity ; glucokinase activity ; glucose binding ; carbohydrate phosphorylation ; glucose 6-phosphate metabolic process ; glucose metabolic process ; glycolytic process ; intracellular glucose homeostasis ; response to glucose" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MDEPTILLTNDDGIESAGLRAVYDGLSTVGDVTAVAPAEDQSAVGRAISHEVTVHEHELGYAVEGTPSDCVVAGLEALVTDTDLVVAGCNRGANLGAYVLGRSGTVSAAVEATFFDVPAMAVSMYIPVREDAAFADIEANGDSYREAAKATTYLADHAVDAGVFEQCDYLNINAPVAEWGDAQMTVTRPSHLYEMDAEQDGDAVTLHDRIWEHMADGDIPDPEGTDRRAVVDGKVSVSPLTAPHTTEHHEALDAIAETYEPDDGGEAAD", - "output": "cytoplasm ; metal ion binding ; nucleotide binding ; XMP 5'-nucleosidase activity" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQDFFPLTVNYQERTYAAGRIPGSFFRREGRPSEGETLIARLIDRPVRPLFPEGFVNEVQVIATVVSVNPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQYVLNPTQDELKESKLDLVVAGTEAAVLMVESEAELLSEDTMLGAVVFGHEQQQIVIQNINDLVKEAGKPRWDWQQEAVNEALNARVAALAEARLSDAYRITDKQERYAQVDVIKSETIAALVAEDETLDENELGEILHAIEKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTARDAQVLDELMGERTDSFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPEMDKFPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEGDNFVVLSDILGDEDHLGDMDFKVAGSRDGISALQMDIKIEGITKEIMQVALNQAKGARLHILGVMEQAINAPRGDISQFAPRIHTIKINPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAATDGEKAKHAIRRIEEITAEIEVGRIYNGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVEKVTDYLQMGQEVPVKVLEVDRQGRVRLSIKEATEQSQPAAAPEAPAAEQGE", - "output": "cytoplasm ; magnesium ion binding ; polyribonucleotide nucleotidyltransferase activity ; RNA binding ; mRNA catabolic process ; RNA processing" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "STGSLGLDLALGVGGLPRGRVVKIFGPESSGKTTLCLEAIAQCQKNGGICAFIDAEHAFDPVYARKLGIKVEELYLSQPDTGEQALEICDTLVRSGGVDMVVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTGHIKRTNTLVVFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGQIKKGDDVIGNETKVKVIKNKVAPPFRQAEFDILYGEGVSWEGELIDL", - "output": "cytoplasm ; ATP binding ; ATP-dependent DNA damage sensor activity ; single-stranded DNA binding ; DNA recombination ; DNA repair ; SOS response" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MSAETAAANTATAPVPEVQEQESSKSKQVNLTPAPLPTSSPWKLAPTEIPVSTISIEDLDATRKKKNRTPTPKSSTATKWVPIKASITVSGTKRSGSKNGASNGNSNKSKNNKTAASSTSSSNANRKKKHHQHNAKKQQQMKKDGFESAVGEEDSKDATSQENGQSTQQQQPPHHRNHHHSHHHNSNGPQRRKFHNSNNAGMPQNQGFPPQFKPYQGRNARNNNNNRSKYHNHFHHNQQHPQQPMVKLQQQFYPVQPVLMAINNIARQIEYYFSEENLTVDNYLRSKLSKDGFAPLSLISKFYRVVNMSFGGDTNLILAALREIVANEAATVNVAEGTLAAKEGDNVTGEAKEPSPLDKYFVRSKSWSNWLPETFETEINIEKELVGDALDQFMISLPPVPQQEEESSTELASQEQETKEDSAPVAAGESESSL", - "output": "cytoplasmic stress granule ; cytosol ; nucleus ; polysome ; transcription repressor complex ; mRNA binding ; RNA binding ; negative regulation of DNA-templated transcription ; positive regulation of translation ; regulation of translation ; response to oxygen levels" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MQIQFLGTGAGQPSKARNVSSLALKLLDEINQVWLFDCGEGTQNRILETTIRPRKVAKIFITHLHGDHIFGLPGFLSSRSFQSSEEQTDIDIYGPVGIRSFVLASLKVSGTRLPYRIHFHEFDVDTVGQVLETDKFTVFAEKLDHTIPCVGYRVIQKDLEGTLDAEALRAAGVPFGPLFGKIKNGQNVTLEDGTEIIASDYISPPRPGKVVTILGDTRKCHASVRLAVNADVLVHEATYGKGDEKIARKHGHSTNMEAAQVAKDAGVKQLLLNHISPRFLSKDISQLRKDASTIFEQVHIVKDLEEIEL", - "output": "3'-tRNA processing endoribonuclease activity ; zinc ion binding" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MALNDFHVSEPYTLGIELEMQVINPPGYDLSQDSSTLIDAVKPQLTAGEIKHDITESMLEMATGVCRDIDQAAAQLSAMQHVILQAASEHHLGICGGGTHPFQKWQRQEVCDNERYQRTLENFGYLIQQATVFGQHVHVGCANGDDAIYLLHGLSHFVPHFIALSAASPYMQGADTRFACARLNIFSAFPDNGPMPWVSNWQEFAGLFRRLSYTTMIDSIKDLHWDIRPSPAFGTVEVRVMDTPLTLDHAINMAGLIQATAHWLLTERPFKPQEQDYLLYKFNRFQACRYGLEGVLTDAYTGDRRRLADDTLRLLDNVTPSARKLGADSAIDALRLQVKKGGNEAQYMREFIADGGSLIGLVQKHCEIWAGQ", - "output": "ATP binding ; glutamate-cysteine ligase activity ; ligase activity, forming carbon-nitrogen bonds ; cellular modified amino acid biosynthetic process" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MLHNIRIVLVETSHTGNMGSTARAMKTMGLTNLYLVNPLVKPDSQAIALSAGASDVIGNATIVDTLDEALAGCSLVVGTSARSRTLPWPMLEPRECGVRSAREAEHAPVALVFGRERVGLTNDELQKCHYHVAIPANPEYSSLNLAMAVQILAYEVRVAFLDRQQAAAPIVEEEEAPYPLVDDLERFYLHLEQVLSHTGFIRQAHPGQIMSKLRRLFTRARPEAQELNILRGMLTSIEKQDKYPQRGADGSEHNGKN", - "output": "cytoplasm ; RNA binding ; RNA methyltransferase activity ; tRNA processing" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MDVLFSIAKTVSDLKKKVVVGTIYTNVEDIIQQTNELIRTLNGNTFHTGGIGTQPQKEWNFQLPQLGTTLLNLDDNYVQATRSVIDYLASFIEAVCDDEIVREASRNGMQPQSPTLIALASSKFKTINFNNSSQSIKNWSAQSRRENPVYEYKNPMVFEYRNSYILQRANPQYGNVMGLRYYTASNTCQLAAFDSTLAENAPNNTQRFIYNGRLKRPISNVLMKIEAGAPNINNLTILPDPTNQTTWLYNPDQLMNGTFTIEFYNNGQLVDMVRNMGVVTVRTFDSYRITIDMIRPAAMTQYVQRLFPQGGPYPYQAAYMLTLSILDATTESVLCDSHSVDYSIVANVRRDSAMPAGTVFQPGFPWEQTLSNYTVAQEDNLERLLLVASVKRMVM", - "output": "viral envelope ; viral intermediate capsid ; host cell surface receptor binding ; structural molecule activity ; fusion of virus membrane with host plasma membrane" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MTASPKNEMSTVFKRLMTYVMPMKGMLTLSILGLIVYGLVDAAFIAFIKPFIDEGFSQNPTVVAGVELPTSGGFSANKDVMLMAPLVVIGMFTLRGVANFVSTYCISYLSAQLIMDMRQQVFEHYLRLPVSYIDRENSGNLISRVTFDTEQIARASGSALISIVRDSITVIGMLALMFFYSWKLSLCILVIGPLMGVVISIVSKRFRKVSVQIQSAMGGVTATTEQMIKGHKNVLSFGGQETESKRFYEVNDRNRYQNMKLAMAQSVSQPVIMIIGSFALAFVLYAASLDSMKLELTAGTFAAILGAMLAMLQPIKNLTRVNAEFQRGIAACTTVFELLDTLPESDTGAHQVERVQGHLRFDNVSFSYPGQAKPALNNIDFDVKPGKTVALVGRSGSGKSTMASLITRFYTGLEQGDIRLDDVSIYDYSLKSLRSQVALVSQQVTLFNDSIANNIAYAYPGEVSREQILKAATLAHAMEFIEQLPEGLDTQVGENGVLLSGGQRQRIAIARAMLRDAPVLILDEATSALDTESEKAIQLGLDNLRHNRTSIVIAHRLSTIESADEILVIDQGKIIERGTHASLIEKKGAYAGLYQMQFGE", - "output": "plasma membrane ; ABC-type transporter activity ; ATP binding ; ATP hydrolysis activity ; ATPase-coupled lipid transmembrane transporter activity" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MSIEVRNVSKNFNAFKALNNISLDIQSGELVALLGPSGCGKTTLLRIIAGLETPDDGSIVFHGEDVSGHDVRDRNVGFVFQHYALFRHMTVFDNVAFGLRMKPKSERPNETRIAEKVHELLNMVQLDWLADRYPEQLSGGQRQRIALARALAVEPKVLLLDEPFGALDAKVRKELRRWLARLHEDINLTSVFVTHDQEEAMEVADRIVVMNKGVIEQIGSPGEVYENPSNDFVYHFLGDSNRLSLGDEGHVLFRPHEVSLSRQEIEDHHAAEVRDIRPLGATTRVTLKVEGQNELIEAEVVKDHDSLVGLAKGETLFFKPKVWQKL", - "output": "ATP-binding cassette (ABC) transporter complex ; ABC-type sulfate transporter activity ; ABC-type thiosulfate transporter activity ; ATP binding ; ATP hydrolysis activity ; sulfate transport" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MSKIVKVLGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVLKALAAVNGPIADALVGKDAKDQATIDQIMIDLDGTENKSNFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGVFSMPLPMMNIINGGEHADNNVDIQEFMIQPVGAKTLKEAVRMGAEVFHNLAKVLKSKGYNTAVGDEGGFAPNLKSNAEALEVIAEAVAAAGYKLGTDITLAMDCAASEFYDAEKKEYNLKGEGRIFTSNGFSDFLEELTEKFPIVSIEDGLDESDWEGFAYQTEKLGKKIQIVGDDLFVTNTKILKRGIDNGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGSRAPFNGLKEVKGQA", - "output": "cell surface ; extracellular region ; phosphopyruvate hydratase complex ; magnesium ion binding ; phosphopyruvate hydratase activity ; glycolytic process" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MPRLERNVYKGLITSLSRKKPSNSLAVKESPLLTKFERWSGKRMKLFFESEDSFEHYGLRDLKLPHNMLANKLASPIRAERNTRYRIPKEFLIKLNLYKDATNNVLQLKANFNGVTGLGTTYIHNNKKCLEMKFCDISRWSSRQPLKVPPLPIVADKSALLKDYENQLIRELNECFSKLKTTSKHDHNTVKLYVSTENNLLMDVDTQGSLCINLQSITDKLPHTMLETVTNAPIHISAYSNMDFLTTLHRLLGYYRHRNR", - "output": "mitochondrion ; mitochondrial genome maintenance" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MDTKTHSLPITHTQLHSNSRPQSRTCSQCTCTHHRQTFSQSCRQSQRGSRSRSSSQSPATHQNPTGAHSSSGLQSQSPNASPPPKRHKKTMNSHHSPTRPTILHSSCPKNRKNLEGKLNKKKMAKRIQQVYKTKKRS", - "output": "nucleolus ; nucleosome ; DNA binding ; zinc ion binding ; acrosome reaction ; penetration of zona pellucida ; positive regulation of protein processing ; sperm DNA condensation ; spermatogenesis" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MKTLSAKPAEVQHDWYVVDASGKTLGRLATEIARRLRGKHKTSYTPHVDTGDYIVVINAEQVQVTGKKSLDKKYYRHTGFPGGIRETNFEKLIAHKPEAVLEKAVKGMLPKGPLGYAMIKKMKVYAGTEHPHAAQQPQVLDI", - "output": "ribonucleoprotein complex ; ribosome ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MPRSTWFKALLLFVALWAPLSQAETGWQPIQETIRKSDKDNRQYQAIRLDNGMVVLLVSDPQAVKSLSALVVPVGSLEDPEAYQGLAHYLEHMSLMGSKKYPQADSLAEYLKMHGGSHNASTAPYRTAFYLEVENDALPGAVDRLADAIAEPLLDKKYAERERNAVNAELTMARTRDGMRMAQVSAETINPAHPGSKFSGGNLETLSDKPGNPVQQALKDFHEKYYSANLMKAVIYSNKPLPELAKMAADTFGRVPNKESKKPEITVPVVTDAQKGIIIHYVPALPRKVLRVEFRIDNNSAKFRSKTDELITYLIGNRSPGTLSDWLQKQGLVEGISANSDPIVNGNSGVLAISASLTDKGLANRDQVVAAIFSYLNLLREKGIDKQYFDELANVLDIDFRYPSITRDMDYVEWLADTMIRVPVEHTLDAVNIADRYDAKAVKERLAMMTPQNARIWYISPKEPHNKTAYFVDAPYQVDKISAQTFADWQKKAADIALSLPELNPYIPDDFSLIKSEKKYDHPELIVDESNLRVVYAPSRYFASEPKADVSLILRNPKAMDSARNQVMFALNDYLAGLALDQLSNQASVGGISFSTNANNGLMINANGYTQRLPQLFQALLEGYFSYTATEEQLEQAKSWYNQMMDSAEKGKAFEQAIMPAQMLSQVPYFSRDERRKILPSITLKEVLAYRDALKSGARPEFMVIGNMTEAQATTLARDVQKQLGADGSEWCRNKDVVVDKKQSVIFEKAGNSTDSALAAVFVPTGYDEYTSSAYSSLLGQIVQPWFYNQLRTEEQLGYAVFAFPMSVGRQWGMGFLLQSNDKQPSFLWERYKAFFPTAEAKLRAMKPDEFAQIQQAVITQMLQAPQTLGEEASKLSKDFDRGNMRFDSRDKIVAQIKLLTPQKLADFFHQAVVEPQGMAILSQISGSQNGKAEYVHPEGWKVWENVSALQQTMPLMSEKNE", - "output": "periplasmic space ; metal ion binding ; metalloendopeptidase activity ; proteolysis" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MKRDYYEILGVSRSADKDEIKKAYRKLALKYHPDKNPDNKEAEEKFKEANEAYEVLSNDDKRRRYDQFGHAGVGSSAASGGGPGGFGGGGYADINDIFEMFTGGGRARGGGSPFSGFEDIFGGGFSGGGGRRARSTGIHGTDLKIRLKLTLEEIAKGVEKTLKIKKQVVCSECNGTGSKSGKTETCQTCHGSGEVRQASKTMFGQFVNIVACPTCGGEGQVVKDRCTSCYGEGIKQGEVTVKINVPAGVQDGNYLTLQGQGNAGPRGGAPGDLIVIIEEKPHDQFKRNGDDIIYDLAVGFPDLVLGTKVDVPTLDGHVKLTVPAGTQPNTMLRIGGKGIGHLKGGGSGDLYVRVNVFVPKDVSGKDKEMLKELKKSSHISPNHGEQDHEKSIFEKAKDIFG", - "output": "cytoplasm ; ATP binding ; heat shock protein binding ; unfolded protein binding ; zinc ion binding ; DNA replication ; protein folding ; response to heat" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MRILKSHPLLKIVNSYIIDSPQPANLSYLWNFGSLLALCLGIQIVTGVTLAMHYTPSVSEAFNSVEHIMRDVNNGWLVRYLHSNTASAFFFLVYLHIGRGLYYGSYKTPRTLTWAIGTVILIVMMATAFLGYVLPYGQMSLWGATVITNLMSAIPWIGQDIVEFIWGGLYTDEPQCGDVLLKILLNAGKSPILGFAYDLFFIIVLLIGVKIAMTRGKSAGVRSLHTSEASQRLHAGDLTYAYLVGLFEGDGYFSITKKGKYLTYELGIELSIKDVQLIYKIKKILGIGIVSFRKINEIEMVALRIRDKNHLKSFILPIFEKYPMFSNKQYDYLRFRNALLSGIISLEDLPDYTRSDEPLNSIESIINTSYFSAWLVGFIEAEGCFSVYKLNKDDDYLIASFDIAQRDGDILISAIRKYLSFTTKVYLDKTNCSKLKVTSVRSVENIIKFLQNAPVKLLGNKKLQYLLWLKQLRKISRYSEKIKIPSNY", - "output": "mitochondrion ; endonuclease activity ; intron homing ; mRNA processing ; RNA splicing" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MIGILKKVFDVNQRQIKRMQKTVEQIDALESSIKPLTDEQLKGKTLEFKERLTKGETVDDLLPEAFAVVREAATRVLGMRPYGVQLMGGIALHEGNISEMKTGEGKTLTSTLPVYLNALTGKGVHVVTVNEYLAQRDASEMGQLHEFLGLTVGINLNSMSREEKQEAYAADITYSTNNELGFDYLRDNMGLYKEECVQRPLHFAIIDEVDSILVDEARTPLIISGQAQKSTELYMFANAFVRTLENEKDYSFDVKTKNVMLTEDGITKAEKAFHIENLFDLKHVALLHHINQGLRAHVVMHRDTDYVVQEGEIVIVDQFTGRLMKGRRYSEGLHQAIEAKEGVEIQNESMTLATITFQNYFRMYEKLSGMTGTAKTEEEEFRNIYNMNVIVIPTNKPIIRDDRADLIFKSMEGKFNAVVEDIVNRHKKGQPVLVGTVAIETSELISKMLTRKGVRHNILNAKNHAREADIIAEAGIKGAVTIATNMAGRGTDIKLGDDVKNVGLAVIGTERHESRRIDNQLRGRAGRQGDPGVTQFYLSMEDELMRRFGSDNMKAMMDRLGMDDSQPIESKMVSRAVESAQKRVEGNNYDARKQLLQYDDVLRQQREVIYKQRQEVMESDNLRGIIEGMMKSTVERAVALHTQEEIEEDWNIKGLVDYLNTNLLQDGDVKEEELRRLAPEEMSEPIIEKLIERYNEKEKLMPEEQMREFEKVVVFRVVDTKWTEHIDAMDHLREGIHLRAYGQIDPLREYQMEGFAMFESMVASIEEEISRYIMKAEIEQNLERQEVVQGEAVHPSSDGEEAKKKPVVKGDQVGRNDLCKCGSGKKYKNCCGIVQ", - "output": "cell envelope Sec protein transport complex ; cytosol ; plasma membrane ; ABC-type protein transporter activity ; ATP binding ; metal ion binding ; protein-exporting ATPase activity ; intracellular protein transmembrane transport ; protein import ; protein targeting ; protein transport by the Sec complex" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MQDFLALTLQGEQPATREGKQANFSWRWLGEGLLECTPHAQYDKAVVLSAGVHGNETAPIELLSHLCTVLFAGRLKLAVRLLLVLGNPYAMRQGKRYVHDDVNRMFCGGYKNLPVTEESKRAEVLEQTVATFFQESSSQAKRYHYDLHTAIRASLLPTFALFPYQTHSYDADLTASLEAADLDALVYHNAVGKTFTHFTSENFKAASATLELGKALPFGQNDLSQFASIDEVIRNVVSEQALPVRNKPKIRVFQVSDSLIKRDEEFHMNLSAEAPNFSTFTKGEIIATQPSGNYVVEQDQVWILFPNPNVKIGLRAGLVLTETI", - "output": "hydrolase activity, acting on ester bonds ; succinylglutamate desuccinylase activity ; zinc ion binding ; arginine catabolic process to glutamate ; arginine catabolic process to succinate" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "QGYSTVAFDGPPSYGHAPSHHAAQFSNHSFKHEDPIAQQTSLGDQQYSVPPPVYGCHTPTDSCTGSQALLLRTPYNSDNLYQMTSQLECMTWNQMNLGSTLKGHATGYENENHTAPMLYSCGAQYRIHTHGVFRGIQDVRRVPGVAPTIVRSASETNEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGKTSEKPFSCRWPSCQKKFARSDELVRHHNMHQRNMTKLQLAL", - "output": "cytoplasm ; nuclear speck ; nucleoplasm ; nucleus ; DNA-binding transcription activator activity, RNA polymerase II-specific ; DNA-binding transcription factor activity ; double-stranded methylated DNA binding ; hemi-methylated DNA-binding ; RNA binding ; sequence-specific DNA binding ; transcription cis-regulatory region binding ; zinc ion binding ; adrenal cortex formation ; adrenal gland development ; branching involved in ureteric bud morphogenesis ; camera-type eye development ; cellular response to gonadotropin stimulus ; diaphragm development ; epithelial cell differentiation ; germ cell development ; glomerulus development ; gonad development ; heart development ; male genitalia development ; mesenchymal to epithelial transition ; metanephric mesenchyme development ; metanephric S-shaped body morphogenesis ; negative regulation of apoptotic process ; negative regulation of cell growth ; negative regulation of DNA-templated transcription ; negative regulation of female gonad development ; negative regulation of metanephric glomerular mesangial cell proliferation ; negative regulation of translation ; podocyte differentiation ; positive regulation of apoptotic process ; positive regulation of DNA-templated transcription ; positive regulation of heart growth ; positive regulation of male gonad development ; positive regulation of metanephric ureteric bud development ; posterior mesonephric tubule development ; regulation of animal organ formation ; regulation of DNA-templated transcription ; regulation of transcription by RNA polymerase II ; RNA splicing ; sex determination ; thorax and anterior abdomen determination ; tissue development ; ureteric bud development ; vasculogenesis ; visceral serous pericardium development" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MKAVGLVVEYNPFHNGHRYHLAQAKRLTGADVVVAVMSGDFTQRGEPTILDKWSRTLAALQNGVDLVVELPVADAVQPAHRFAMGALSLLNDLQVADVVFGAEHPDWDFAAMVKAEQDFNQAAFHQFNNTYATQFNQQLEAVTGHALTDPNDILAFAYHRAKAAGDFGFHLQPIQRVDNHYADQQLTGAISSAGAIRQAVKGHQDVTETVPVQTASALAKLTTIPNWEQLYPLLANHLIQTPAPLLEQTYQVKEGLENRLKEAAERHRDFTSFLKAVKTKRYTYGRLMRVAFYLTLNLSDQDMANYHPYHRVLGFTAAGQAYLHQVKKELSYPLITKVNQRMKNAELALDYRAGKLYQFFGTPEQDLTRGPIRLV", - "output": "cytoplasm ; ATP binding ; ligase activity, forming carbon-nitrogen bonds ; tRNA binding ; tRNA modification" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MTHQTHSYHMVNPSPWPLTGALSALLMTSGLIMWFHFNSMILLTLGLSTNILTMYQWWRDIIRESTFQGHHTPTVQKGLRYGMILFIVSEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGNRKHMLQALFITIALGLYFTLLQASEYYEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCFLRQVKFHFTSNHHFGFERAAWYWHFVDVVWLFLYVSIYWWGS", - "output": "mitochondrial inner membrane ; respiratory chain complex IV ; cytochrome-c oxidase activity ; aerobic electron transport chain ; respiratory chain complex IV assembly" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MASFPETDFQICLLCKEMCGSPAPLSSSSSASSSSSQTSTSSAGGGGPGAAARRLHVLPCLHAFCRPCLEAHRLPAPGGAGPAEALKLRCPVCDQKVVLAEAAGMDALPSSAFLLSNLLDAVVATADEPPPKNGRAGGGPGGAGGHSNHRHHAHHPAQRAAAPAPQPPPGPAASPGSLLLRRPHGCSSCDEGNAASSRCLDCQEHLCDNCVRAHQRVRLTKDHYIERGPPGPAAASAAQQLGLGPPFAGAPFSILSVFPERLGFCQHHDDEVLHLYCDTCSVPICRECTLGRHGGHSFAYLQDALQDSRALTIQLLADAQQGRQAIQLSIEQAQTVAEQVEMKAKVVQSEVKAVTARHKKALEERECELLWKVEKIRQVKAKSLYLQVEKLRQNLNKLESTISAVQQVLEEGRALDILLARDRMLAQVQELKTIRGLLQPQEDDRVMFTPPDQALYLALKSFGFVSSGAFAPLTKAAGDGIKRALQGKVASFTVMGYDHNGEPRLSGGDLMSVVVLGPDGNLFGAEVSDQQNGTYVVSYRPQLEGEHLVSVTLYNQHIENSPFKVVVKSGRSYVGIGLPVLSFGSEGDGEGKLCRPWGVSVDKEGYIIVADRSNNRIQVFKPCGSFHHKFGTLGSRPGQFDRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLFGPDGVFLNKYGFEGSLWKHFDSPRGVAFNHEGHLVVTDFNNHRLLVIHPDCQSARFLGSEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQMFEANGSFLCKFGAQGSGFGQMDRPSGIAVTPEGLIVVVDFGNNRILIF", - "output": "P-body ; miRNA binding ; translation repressor activity ; ubiquitin protein ligase activity ; ubiquitin-protein transferase activity ; zinc ion binding ; 3'-UTR-mediated mRNA destabilization ; cellular response to organic substance ; fibroblast growth factor receptor signaling pathway ; G1/S transition of mitotic cell cycle ; miRNA metabolic process ; miRNA processing ; miRNA-mediated gene silencing by inhibition of translation ; negative regulation of translation ; neural tube closure ; neural tube development ; positive regulation of miRNA-mediated gene silencing ; post-transcriptional regulation of gene expression ; proteasome-mediated ubiquitin-dependent protein catabolic process ; protein autoubiquitination ; protein polyubiquitination ; protein ubiquitination ; regulation of miRNA-mediated gene silencing ; regulation of neural precursor cell proliferation ; regulation of protein metabolic process ; stem cell proliferation" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MSSGAVLTSQEYITHHLSNLKVGEGFWAVHLDSLGWSVFLGLVFLTIFRSVAKKATSGVPGKLQCAVEMVVGFVDDSVKSTFHGKNALIAPLSLTIFVWILLMNSMDWVPVDLLPHLIHWVTGMPLGDIYMKPVPTADPNITFGLALGVFILIIYYSIKVKGVGGFMKELTTQPFGHWSLYPVNFILETVTMLARPLSLALRLFGNLYAGELIFLLIATIGVFQLPVHFLWAAFHLLVIPLQAFIFMMLTIVYLSLAHEDH", - "output": "plasma membrane ; proton-transporting ATP synthase complex, coupling factor F(o) ; proton-transporting ATP synthase activity, rotational mechanism" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MVNNMTDLTAQDAVWQTRDHLDDPVIGELRNRFGPDAFTVQATRTGVPVVWVKREQLLEVGDFLKKLPKPYVMLFDLHGMDERLRTHRDGLPAADFSVFYHLISIDRNRDIMLKVALSENDLHVPTFTKLFPNANWYERETWEMFGITFDGHPHLTRLLMPPTWEGHPLRKDYPARATEFDPFELTKAKQDLEMEALTFKPEDWGMQRGTENEDFMFLNLGPNHPSSHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDVVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLRDFLDWMPKRLDSYEKAALRNTILKGRSQGVAAYGKKEALDWGCTGAALRATGIDFDVRKSRPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMVEATKGINSYYLTSDGSTMSYRTRIRTPSYAHLQQIPVAVRGSLVSDLIVHLGSIDFVMSDVDR", - "output": "NADH dehydrogenase complex ; plasma membrane ; NAD binding ; NADH dehydrogenase (ubiquinone) activity ; quinone binding ; respiratory electron transport chain" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MTTFYTVVSWLVILGYWVLIAGVTLRILMKRRAVPSAMAWLLIIYILPLVGIIAYLSVGELHLGKRRAERARAMWPSTAKWLNDLKACKHIFAQENSSVASSLFKLCERRQGIAGVKGNQLQLLTDSDDVMQALIRDIQLARHNIEMVFYIWQPGGMADQVAESLMAAARRGIHCRLMLDSAGSVAFFRSPWAAMMRNAGIEVVEALKVNLMRVFLRRMDLRQHRKMVMIDNYIAYTGSMNMVDPRFFKQDAGVGQWVDLMARMEGPVATAMGIVYSCDWEIETGKRILPPSPDVNIMPFEQASGHTIHTIASGPGFPEDLIHQALLTATYAAREYLIMTTPYFVPSDDLLHAICTAAQRGVDVSIILPRKNDSLLVGWASRAFFSELLAAGVKIYQFEGGLLHTKSVLVDGELSLVGTVNLDMRSLWLNFEITLVIDDTGFGADLAAVQDDYISRSRLLDARLWVKRPLWQRITERLFYFFSPLL", - "output": "plasma membrane ; cardiolipin synthase activity ; cardiolipin biosynthetic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MKLILVLLCLISTLFVVKGGLSPTEQQIIVSYHNKWRSSPIGPTPSTTIPALKWNATIAAALQSSLDKCDGKFSTMSQYGTNSEWQSWWTPNTYFNLNATLDNIQKGASFYDWNAKGCNSSANYNCQLWTYAVWSKSTSYGCAKTICPDKSEVSCSYYPAGGFKGVLPYTPKTTTPAPTTPAPTTPKPTTPAPTTPKPTTPAPTTPKPTTPAPTTPKPTTPAPTTPKPTTPAPTTPAPTSTLTVDWTSYQTPIRDQGQCGSCWAFASSAALESRYLIKYGTAQKSTLQLSNQNAVNCIASGCNGGWSGNYFNFFKTPGIAYEKDDPYKAVTGTSCITTSSVARFKYTNYGYTEKTKAALLAELKKGPVTIAVYVDSAFQNYKSGIYNSATKYTGINHLVLLVGYDQATDAYKIKNSWGSWWGESGYMRITASNDNLAIFAYNSYYPTF", - "output": "external side of plasma membrane ; extracellular space ; cysteine-type endopeptidase activity ; cysteine-type peptidase activity ; conjugation with cellular fusion ; proteolysis involved in protein catabolic process ; sexual reproduction" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MPKYKTSEQVLSLMKDRTRVRNIGIIAHVDHGKTTTSDQLLAASGIISPKVAGEALALDYLSVEQQRGITVKAANVSLYHEVEGKGYVINLIDTPGHVDFSGRVTRSLRVLDGSIVVVDSVEGVMTQTETVLRQSLEERVRPILFVNKVDRLVKELKLGPQEMMQKLMDIIKEVNNLINIYAEPELKEKWAINPTLGNVVFGSAKDRWGFSIPMAQKKGINMKHVIDAYSTTDKTKINELASQVPINEALLDAVIKFVPNPVDAQKYRIPKIWKGDLDNELAKSMLNADPNGPVVMMITDMKVDPHAGLVATGRVFSGTIRPGSEVWLVNAKAPQKVLQVSIYMGQFRELADEIPAGNIAAVLGLERARSGETLIDIRYKDLQGSFEKLHYVSEPVVTIAVEPKNPKDLTKMIDALRKLSIEDPNLVVKINEETGEYLLSGMGFLHVEVSLQLLKDNYGVDVVTTPPIVVYRESVRNKSQVFEGKSPNKHNKFYISVEPLNDKTIELISNGTIKEDMDSKEMAKILRDQADWDYDEAKKIIAIDENVNVLIDATSGVQHLREIMDTMLQGYRLAMREGPLAHEPIRGVKVILHDATIHEDPAHRGPAQIYPAVRNAIFAAMLMSKPTLLEPLQKLDIRVPMEFVGNVTAVLSRKRGKVLNMTQSGSVARILAEIPVSESYELASDLRGSTGGRAFWGTEFSKWAPVPDSILTDVILKIRERKGLPKELPKVEDFLS", - "output": "cytoplasm ; GTP binding ; GTPase activity ; translation elongation factor activity" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MARDYYGILGVDRNATDSEIKKAYRKLARKYHPDVNPSEEAAEKFREASVAHEVLTDPDKRRIVDMGGDPMEQGGGAGHPGGFGSGGLGDIFDAFFGGGAGSRGPRSRVQPGSDTLWRTSITLEEAFTGVKKDLTLDTAVLCSKCHGSGSASNAKPKTCGTCHGSGEIQEVQRSFLGNVMTSRPCHTCNGTGEVIPDPCDECAGDGRVRARRDIVADIPAGIQSGMRIRMAGQGEVGAGGGPAGDLYVEVMVRPHAVFTRDGDDLHASIRVPMIDAALGSELEVESLTGEEITVVIPAGTQPNQVITLEGEGMPRLRAEGRGDLMAHVDLFVPTEIDDRTRELLEQIRDYRRDNSSVHREGEEHGGLFDKLKSKFRNR", - "output": "cytoplasm ; ATP binding ; heat shock protein binding ; unfolded protein binding ; zinc ion binding ; DNA replication ; protein folding ; response to heat" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MATQAAPASGVRNGAGPEWGGFEENIQGGGSAVIDMENMDDTSGSSFEDMGELHQRLREEEVDADAAAAEEEDGEFLGMKGFKGQLSRQVADQMWQAGKRQASKAFSLYANIDILRPYFDVEPAQVRSRLLESMIPIKMVNFPQKVAGELYGPLMLVFTLVAILLHGMKTSDTIIREGTLMGTAIGTCFGYWLGVSSFIYFLAYLCNAQITMLQMLALLGYGLFGHCIVLFITYNIHLHALFYLFWLLLGGLSTLRMVAVLVSRTVGPTQRLLLCGTLAALHMLFLLYLHFAYHKVVEGILDTLEGPNIPPMQRVPRDIPAVLPAAKLPVAVVNATAKAIAVTLQSH", - "output": "Golgi apparatus ; plasma membrane ; transport vesicle ; cell differentiation" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MGVFTYETEFTSVIPPPRLFKAFILDADNLIPKIAPQAVKCAEIIEGDGGVGTIKKITFGEGSQFGSVTHKIDGIDKDNFVYSYSLVEGDALSDKIEKISYETKLVASSDGGSIIKSTSNYHTKGDVEIKEEHVKAGKEKASHLFKLVEGYLLANPNEYC", - "output": "abscisic acid binding ; nuclease activity ; protein phosphatase inhibitor activity ; signaling receptor activity ; abscisic acid-activated signaling pathway ; defense response ; response to biotic stimulus" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MGCRACLRPEASGAVQGRWLGAALSGLCLLSALALLEWLGAPTETAWRAAQGNVDAPNVGSSTAQVPRLLTMSVTRRRRYTLTPARLRWDHFNLTYRVLSFPRNLLSPEETRRGLAAAFRMWSDVSPFSFREVAPERPSDLKIGFYPVNHTDCLVSAVHHCFDGPTGELAHAFFPPHGGIHFDDSEYWVLGPTRYSWKKGVWLTNLVHVAAHEIGHALGLMHSQQDQALMHLNATLRGWKALSQDELWGLHRLYGCLDRIFVCASWARKGFCDVRQRLMKRLCPRSCDFCYEFPFPTVATTTSPTRTKTRLVREGRNMTFHCGQKILHKKGKVYWYKDQEPLEFSYPGYLALGEAQLSIIANAVNEGTYTCVVRRHQRVLSTYSWRVRVRN", - "output": "endoplasmic reticulum membrane ; extracellular matrix ; metalloendopeptidase activity ; zinc ion binding ; collagen catabolic process ; extracellular matrix organization ; proteolysis ; reproduction" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MSEEQVNIKKKEKWGIAHIYSSFNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAAEEALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTRPKGGRRGRRV", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MPRPTGKKFDKRRQQQNPLFKRKKFCRFTAAGVEQIDYKDIDTLKDFIGENGKITPARLTGTKAHYQRQLDTAIKRARFLALMPYTDQHKA", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MEVVEVLHMNGGNGDSSYANNSLVQQKVILMTKPITEQAMIDLYSSLFPETLCIADLGCSLGANTFLVVSQLVKIVEKERKKHGFKSPEFYFHFNDLPGNDFNTLFQSLGAFQEDLRKHIGESFGPCFFSGVPGSFYTRLFPSKSLHFVYSSYSLMWLSQVPNGIENNKGNIYMARTSPLSVIKAYYKQYEIDFSNFLKYRSEELMKGGKMVLTLLGRESEDPTSKECCYIWELLAMALNKLVEEGLIKEEKVDAFNIPQYTPSPAEVKYIVEKEGSFTINRLETSRVHWNASNNEKNGGYNVSRCMRAVAEPLLVSHFDKELMDLVFHKYEEIVSDCMSKENTEFINVIISLTKIN", - "output": "metal ion binding ; methyltransferase activity ; aromatic compound biosynthetic process ; methylation ; response to ethylene" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MDATTIISLFILGSILVTSSILLSSFSSRLGIPILVIFLAIGMLAGVDGVGGIPFDNYPFAYMVSNLALAIILLDGGMRTQASSFRVALGPALSLATLGVLITSGLTGMMAAWLFNLDLIEGLLIGAIVGSTDAAAVFSLLGGKGLNERVGSTLEIESGSNDPMAVFLTITLIAMIQQHESSVSWMFVVDILQQFGLGIVIGLGGGYLLLQMINRIALPAGLYPLLALSGGILIFALTTALEGSGILAVYLCGFLLGNRPIRNRYGILQNFDGLAWLAQIAMFLVLGLLVNPSDLLPIAIPALILSAWMIFFARPLSVFAGLLPFRGFNLRERVFISWVGLRGAVPIILAVFPMMAGLENARLFFNVAFFVVLVSLLLQGTSLSWAAKKAKVVVPPVGRPVSRVGLDIHPENPWEQFVYQLSADKWCVGAALRDLHMPKETRIAALFRDNQLLHPTGSTRLREGDVLCVIGRERDLPALGKLFSQSPPVALDQRFFGDFILEASAKYADVALIYGLEDGREYRDKQQTLGEIVQQLLGAAPVVGDQVEFAGMIWTVAEKEDNEVLKIGVRVAEEEAES", - "output": "plasma membrane ; flavin adenine dinucleotide binding ; potassium:proton antiporter activity ; cell volume homeostasis" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MKFQYKEDHPFEYRKKEGEKIRKKYPDRVPVIVEKAPKARVPDLDKRKYLVPSDLTVGQFYFLIRKRIHLRPEDALFFFVNNTIPPTSATMGQLYEDNHEEDYFLYVAYSDESVYGK", - "output": "autophagosome ; cytoplasmic vesicle membrane ; endoplasmic reticulum ; Golgi apparatus ; microtubule ; mitochondrion ; Tat protein binding ; ubiquitin protein ligase binding ; glycophagy" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MAKFIQHIGLVAPLDAANVDTDAIIPKQFLQKVTRTGFGQHLFNDWRFLDDAGKVPNPDFVLNLPRYQGATILLARENFGCGSSREHAPWALTDFGFKVVIAPSFADIFYGNAFNNQLLPVTLSEADIDTLFQLVKENEGIEFVVDLEQQTVNAGGKSYAFEIDPFRRHCMINGLDSIGLTLQHEHNISAYEKQQPEFLR", - "output": "3-isopropylmalate dehydratase complex ; 3-isopropylmalate dehydratase activity ; leucine biosynthetic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MGQSVLRAVFFLVLGLLGHSHGGFPNTISIGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQFSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFVIQMRPALKGAILSLLGYYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQVTARSVGNIKDIQEFRRIIEEMDRRQEKRYLIDCEVERINTILEQVVILGKHSRGYHYMLANLGFTDIVLERVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNAPLKYTSALTHDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTGNIQFDTYGRRTNYTIDVYEMKVSGSRKAGYWNEYERFVPFSDQQISNDSSSSENRTIVVTTILESPYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFSPYEWHLEDNNEEPRDPQSPPDPPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALRTPVNLAVLKLSEQGILDKLKNKWWYDKGECGAKDSGSKDKTSALSLSNVAGVFYILVGGLGLAMMVALIEFCYKSRAESKRMKLTKNTQNFKPAPATNTQNYATYREGYNVYGTESVKI", - "output": "AMPA glutamate receptor complex ; asymmetric synapse ; dendrite ; dendritic shaft ; dendritic spine ; glutamatergic synapse ; membrane ; neuronal cell body ; parallel fiber to Purkinje cell synapse ; perikaryon ; plasma membrane ; postsynaptic density ; postsynaptic density membrane ; postsynaptic membrane ; presynaptic active zone membrane ; presynaptic membrane ; protein-containing complex ; synaptic cleft ; terminal bouton ; AMPA glutamate receptor activity ; amyloid-beta binding ; ionotropic glutamate receptor activity ; ligand-gated monoatomic ion channel activity involved in regulation of presynaptic membrane potential ; PDZ domain binding ; transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential ; modulation of chemical synaptic transmission ; regulation of receptor recycling ; synaptic transmission, glutamatergic" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MGVNAVHWFRKGLRLHDNPALKECIQGADTIRCVYILDPWFAGSSNVGINRWRFLLQCLEDLDANLRKLNSRLFVIRGQPADVFPRLFKEWNITKLSIEYDSEPFGKERDAAIKKLATEAGVEVIVRISHTLYDLDKIIELNGGQPPLTYKRFQTLISKMEPLEIPVETITSEVIEKCTTPLSDDHDEKYGVPSLEELGFDTDGLSSAVWPGGETEALTRLERHLERKAWVANFERPRMNANSLLASPTGLSPYLRFGCLSCRLFYFKLTDLYKKVKRNSSPPLSLYGQLLWREFFYTAATNNPRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSINAGSWMWLSCSSFFQQFFHCYCPVGFGRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNAPEGIQKVAKCLIGINYPKPMVNHAEASRLNIERMKQIYQQLSRYRGLGLLASVPSNPNGNGGFMGYSTENIPGCSSSGSCSQGSGILHYTHGDSQQTHLLKQGRSSMGTGLSGGKRPSQEEDTQSIGPKVQRQSTN", - "output": "cytoplasm ; nucleus ; nucleotide binding ; photoreceptor activity ; circadian regulation of gene expression ; circadian rhythm ; entrainment of circadian clock by photoperiod ; gluconeogenesis ; glucose homeostasis ; negative regulation of circadian rhythm ; negative regulation of DNA-templated transcription ; negative regulation of G protein-coupled receptor signaling pathway ; negative regulation of glucocorticoid receptor signaling pathway ; negative regulation of gluconeogenesis ; negative regulation of protein ubiquitination ; negative regulation of transcription by RNA polymerase II ; positive regulation of protein ubiquitination ; regulation of circadian rhythm ; regulation of DNA damage checkpoint ; response to activity ; response to glucagon ; response to light stimulus ; signal transduction in response to DNA damage" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MTTQQIVLQGPGPWGFRLVGGKDFEQPLAISRVTPGSKAAIANLCIGDLITAIDGEDTSSMTHLEAQNKIKGCADNMTLTVSRSEQKIWSPLVTEEGKRHPYKMNLASEPQEVLHIGSAHNRSAMPFTASPAPSTRVITNQYNSPTGLYSSENISNFNNAVESKTSASGEEANSRPVVQPHPSGSLIIDKDSEVYKMLQEKQELNEPPKQSTSFLVLQEILESDGKGDPNKPSGFRSVKAPVTKVAASVGNAQKLPICDKCGTGIVGVFVKLRDHHRHPECYVCTDCGINLKQKGHFFVEDQIYCEKHARERVTPPEGYDVVTVFRE", - "output": "actin cytoskeleton ; adherens junction ; cytoplasm ; cytoskeleton ; filamentous actin ; stress fiber ; transcription regulator complex ; Z disc ; actin binding ; metal ion binding ; muscle alpha-actinin binding ; transcription coactivator activity ; actin cytoskeleton organization ; establishment or maintenance of actin cytoskeleton polarity ; fibroblast migration ; heart development ; maintenance of cell polarity ; muscle structure development ; regulation of transcription by RNA polymerase II ; response to hypoxia ; stress fiber assembly" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MALLGKRCDVPTNGCGPDRWNSAFTRKDEIITSLVSALDSMCSALSKLNAEVACVAVHDESAFVVGTEKGRMFLNARKELQSDFLRFCRGPPWKDPEAEHPKKVQRGEGGGRSLPRSSLEHGSDVYLLRKMVEEVFDVLYSEALGRASVVPLPYERLLREPGLLAVQGLPEGLAFRRPAEYDPKALMAILEHSHRIRFKLKRPLEDGGRDSKALVELNGVSLIPKGSRDCGLHGQAPKVPPQDLPPTATSSSMASFLYSTALPNHAIRELKQEAPSCPLAPSDLGLSRPMPEPKATGAQDFSDCCGQKPTGPGGPLIQNVHASKRILFSIVHDKSEKWDAFIKETEDINTLRECVQILFNSRYAEALGLDHMVPVPYRKIACDPEAVEIVGIPDKIPFKRPCTYGVPKLKRILEERHSIHFIIKRMFDERIFTGNKFTKDTTKLEPASPPEDTSAEVSRATVLDLAGNARSDKGSMSEDCGPGTSGELGGLRPIKIEPEDLDIIQVTVPDPSPTSEEMTDSMPGHLPSEDSGYGMEMLTDKGLSEDARPEERPVEDSHGDVIRPLRKQVELLFNTRYAKAIGISEPVKVPYSKFLMHPEELFVVGLPEGISLRRPNCFGIAKLRKILEASNSIQFVIKRPELLTEGVKEPIMDSQGTASSLGFSPPALPPERDSGDPLVDESLKRQGFQENYDARLSRIDIANTLREQVQDLFNKKYGEALGIKYPVQVPYKRIKSNPGSVIIEGLPPGIPFRKPCTFGSQNLERILAVADKIKFTVTRPFQGLIPKPDEDDANRLGEKVILREQVKELFNEKYGEALGLNRPVLVPYKLIRDSPDAVEVTGLPDDIPFRNPNTYDIHRLEKILKAREHVRMVIINQLQPFAEICNDAKVPAKDSSIPKRKRKRVSEGNSVSSSSSSSSSSSSNPDSVASANQISLVQWPMYMVDYAGLNVQLPGPLNY", - "output": "cytosol ; nucleoplasm ; nucleus ; DNA-binding transcription factor activity ; DNA-binding transcription factor activity, RNA polymerase II-specific ; DNA-binding transcription repressor activity, RNA polymerase II-specific ; RNA polymerase II cis-regulatory region sequence-specific DNA binding ; negative regulation of transcription by RNA polymerase II ; regulation of DNA-templated transcription ; transcription by RNA polymerase II ; transition between slow and fast fiber" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MAKKITAYIKLQVKAAQANPSPPVGPALGQHGVNIMEFCKAFNARTQGIEPGLPTPVIITVYSDRSFTFETKSTPASVLLKKAAGLTSGSAHPNTVKVGTVTRAQLEDIAKAKNADLTAADMEAAVRTIAGSARSMGLNVEGV", - "output": "ribonucleoprotein complex ; ribosome ; large ribosomal subunit rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MSYKSGFVSIVGRPNVGKSTLLNQVVGTKIAIMSDKPQTTRNKIRAVLTSEKGQIIFIDTPGVQKPRNKLGEFMLKQALTSLDEVDVLLYVVEANSPIGPQENYLLKTLAEVKTPIILVVNKIDVVKMIEAQTLARQIESRLKVAKTYYISALNGTGVSELVEGIFELLPEGPPYYPEGQVTDYPERFIIAEYIREQILHLTREEIPHSVAVVVEEIKPRENSNTVYVSAVIYVERESQKGIIIGKNGQMLKEIGQRARLEIERLLGSNIYLDLWVKVKEDWRNKDVWIRNFGFTEFE", - "output": "cytoplasm ; plasma membrane ; GTP binding ; GTPase activity ; small ribosomal subunit rRNA binding ; ribosomal small subunit biogenesis" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "PFNPETVYALLAMLISFFVLLASARKENSDEGISFNFTNFTRGDQGVTLLGQANIMANGILALTNHTNPTWNTGRALYSKPVPIWDSATGNVASFVTSFSFVVQEIKGAIPADGIVFFLAPEARIPDNSAGGQLGIVNANKAYNPFVGVEFDTYSNNWDPKSAHIGIDASSLISLRTVKWNKVSGSLVKVSIIYDSLSKTLSVVVTHENGQISTIAQVVDLKAVLGEKVRVGFTAATTTGRELYDIHAWSFTSTLVTATSSTSKNMNIASYA", - "output": "carbohydrate binding ; metal ion binding" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MDESALLDLLECPVCLERLDASAKVLPCQHTFCKRCLLGIVSSRKELRCPECRTLVECGVDELPSNILLVRLLDGIRQRPRKAGDGGSAGNSTNALRAQGSVTTNGGLNDAQNTQSGQQRIQARSPPVRGVPQLPCAKALYNYEGKEPGDLKFNKGDIIVLRRQVDENWYHGEINGIHGFFPTNFVQIIKPLPQPPPQCKALYDFEVKDKEADKDCLPFLKDDILTVIRRVDENWAEGMLGDKIGIFPISYVEFNSAAKQLIELDKPSGADTGEGSSGTSHSGNSQKQADAKKNTKKRHSFTSLTMSNKSSQSVQNRHSMEISPPVLISSSNPTAAARISELTGLSCSAPSQDMNPPLLPPPPMATPVITSASSGAAAVAQRNIIGPVEQVPHLRTSARPSVFIAIYPYIPRKEDELELRKGEMFLVFERCQDGWFKGTSMHTSKIGVFPGNYVAPVTRALTTATPAKVAMATATTSNVVNLVTPTPPGAPCQKLPVSGVEFAKTSSTNGVSPAGVPGCHIQTSPQSKVLLHMSGQMTVNQARNAVRTAAAHSQDRPTAAVTPIQAQTPAASALPQQAAASQQVPPPLSAPAAYINAAMNISRPSVPAASAASSALPTAAFEAESSWKSSSGLSGCSFSENVSAPLNSAANKQDKDSKKEKKGLLKLLSGASTKRKPRSSPPHSPTQEVEQTNSEAAAALEGAVGPDIVPVIVNGRAAPCTVDCDSVSASTPAQDNRKPASLDNNIPIAPPPRQPCSSLGSVLNDSRPCERYRVMVSYPPQSEAELELKEGDIVFVHKKREDGWFKGTLQRNGKTGLFPGSFVENI", - "output": "Golgi apparatus ; lamellipodium ; perinuclear region of cytoplasm ; MAP-kinase scaffold activity ; metal ion binding ; ubiquitin protein ligase activity ; neuron migration ; positive regulation of JNK cascade ; protein autoubiquitination ; regulation of CD4-positive, alpha-beta T cell differentiation ; regulation of CD8-positive, alpha-beta T cell proliferation" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MGGKWSKSSVIGWPTVRERMRRAEPAADGVGAASQDLEKHGAITSSNTAATNADCAWLEAQEEEEVGFPVTPQVPLRPMTYKAAVDLSHFLKEKGGLEGLIHSQRRQDILDLWIYHTQGYFPDWQNYTPGPGIRYPLTFGWCYKLVPVEPEKLEEANKGENTSLLHPVSLHGMDDPEREVLEWRFDSRLAFHHVARELHPEYFKNC", - "output": "extracellular region ; host cell Golgi membrane ; host cell plasma membrane ; membrane ; virion component ; ATPase binding ; CD4 receptor binding ; GTP binding ; MHC class I protein binding ; protein kinase binding ; SH3 domain binding ; signaling receptor binding ; thioesterase binding ; modulation by virus of host immune response ; negative regulation of CD4 production ; regulation of calcium-mediated signaling ; suppression by symbiont of host T-cell mediated immune response ; suppression by virus of host antigen processing and presentation of peptide antigen via MHC class I ; suppression by virus of host antigen processing and presentation of peptide antigen via MHC class II ; suppression by virus of host autophagy ; viral life cycle" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MADQEFDIDAYFASQSEGKSVVASTPENQHCGFVAIVGRPNVGKSTLLNNLLGQKISITSRKPQTTRHRIMGVETDGNYQAIYVDTPGLHIEEKRAINRLMNRAASSSLSDVNLVLFVVEGTHWTADDEMVFTKLQKANFPVVLCVNKVDQVKDRNEVMLHMLELSKRMQFVDIVPISAKQGKNTDVLKKHVRDHLPKAVHHFPEEYVTDRSQRFMASEIVREKLMRFTGEELPYSVTVEIERFDYNPDTDGFHINALILVERIGQKKMVIGKNGEKIKTIGREARLDMEELFGRKVYLETWVKVKSGWADDERALRSLGYIDDL", - "output": "cytosol ; plasma membrane ; GTP binding ; GTPase activity ; ribosomal small subunit binding ; rRNA binding ; small ribosomal subunit rRNA binding ; ribosomal small subunit assembly" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MKQAIESFIQSKKVSVNSQKSYTYDLQQFVTVTKGEISQQSLLVYQQSLLDLKPAAQKRKMSAVNQFLYFLYENNLLDRFYKLQTTSGPASVKKKLEREDLTLLFQESPWLEGQLIALLIAYLGLTPSEIAELTSQQVNLDFQVLTVEKGGAKRVLTLPKELIPYMESHLSGRYVFDKKGQTYSRQWFFNRLTEFVQSIGKPDWTAQKLREQYILKQIDEGKSLDQIAKQLGLKTSMSLEKFR", - "output": "cytoplasm ; DNA binding ; tyrosine-based site-specific recombinase activity ; transposition, DNA-mediated" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MNPQLHNIILPIYMDYQATTPLDPRVMEAMLPYFTTKFGNPHSRSHSFGWEAENAVEEARSRVAKLIGADAKEIIFTSGATESNNLAIKGIAKFYGNKKNHIITVVSEHKCVLDACRHLEQEGIKITYLPINPNGIIDLEILKESITNQTMLVSVMAVNNEIGVIQPLKEIGKICRERGVFLHSDIAQGFGKIPINVNEFNIDLASISGHKIYGPKGVGALYVRKKPRIRVTPLINGGGQERGMRSGTLPTPLIVGLGMAAEIAYNEMEKDNKHVSYLFDRFLNNIKQKISEVYLNGDKDQRYKGNLNLSFAGVEGESIILAIKDLAVSSGSACTSASLEPSYVLRSMGIGEELAHTSIRFGIGKFTTEQEIDYAVDLICSKIDKLRELSPLWEMMQQGIDLKKIKWASH", - "output": "cytoplasm ; 2 iron, 2 sulfur cluster binding ; cysteine desulfurase activity ; metal ion binding ; pyridoxal phosphate binding ; cluster assembly" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MSLRHFLTLSDFTKQELENLIKRASELRKMQHAGEIYQPFVGRTLGMIFEKSSTRTRISFETGMGQFGGNAIFLSPNDTQLGRGEPLEDSARVISSMVDIIMIRTFGHEKVETFAKYSSVPIINALTDEFHPCQLLADMQTYYEHRGSIENKIVTWVGDGNNMCASFMQAAHQFGFELRVAAPYGFEPDSALMERFSHCVSLVENVQDAAKDSNLIVTDVWASMGQESEQNTRARRFAPYQVTPSLLDKADPEVVFMHCLPAHRGEEISHDMLDDPRSVVWDEAENRLHAQKALMEFLLKDKIKLPA", - "output": "cytoplasm ; amino acid binding ; ornithine carbamoyltransferase activity ; arginine biosynthetic process" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIHIIPDKTNNTLTIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVSMIGQFGVGFYSAYLVADKVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGEALGRGTKMVLYLKEDQMEYIEERRLKDLVKKHSEFISYPISLWIEKTIEKEISDDEEEEEKKDEEGKVEEVDEEKEKEEKKKKKIKEVSHEWDLVNKQKPIWMRKPEEINKEEYAAFYKSLSNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTKKKPNNIKLYVRRVFIMDNCEDIIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCLELFFEIAENKEDYNKFYEAFSKNLKLGIHEDSQNRTKIAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIFYITGESKKAVENSPFLEKLKKKGIEVLYMVDAIDEYAIGQLKEFEGKKLVSATKEGLKLDETEDEKKKKEELKEKFEGLCKVIKDVLGDKVEKVIVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDSSMGGYMSSKKTMEINPENSIMDELRKRADADKNDKSVKDLVLLLFETALLTSGFSLDEPNTFGSRIHRMLKLGLSIDDDDVVEADADMPPLEDDADAEGSKMEEVD", - "output": "cytosol ; Golgi apparatus ; nucleolus ; perinuclear region of cytoplasm ; plasma membrane ; plastid ; protein-containing complex ; secretory vesicle ; ATP binding ; ATP hydrolysis activity ; ATP-dependent protein folding chaperone ; mRNA binding ; unfolded protein binding ; cellular response to calcium ion ; cellular response to heat ; chaperone-mediated protein complex assembly ; innate immune response ; protein folding ; protein stabilization ; response to heat" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "SCSCKRNFLCC", - "output": "extracellular region ; toxin activity" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MLKRIVQAFFIIFGGVVGIFLIPELFVLLNIQDIPLITNAYTSAAIGAIIFFLISIWGTEYVVNWVKWIEDSLLKAPVPDLLFGSLGLVFGLIIAYLIVNVIPLDNIPYRIFSTIIPVFLAFFLGYLGFQVGFKKKDELISLFSISARMQKKKGTADEEHEVQDKKLKILDTSVIIDGRIADICQTGFLEGVIVIPQFVLEELQHIADSSDVLKRNRGRRGLDILNRIQKELDIEVEIYEGDFEDIQEVDSKLVKLAKLTSGVVVTNDFNLNKVCELQKVAVLNINDLANAVKPVVLPGEEMNVQVIKDGKEHNQGVAYLDDGTMIVVEEGRNYIGKHIDVLVTSVLQTAAGRMIFAKPKLLEKAL", - "output": "metal ion binding ; nuclease activity" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MVPQTETKAGAGFKAGVKDYRLTYYTPDYVVRDTDILAAFRMTPQLGVPPEECGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYDIEPVPGEDNQYIAYVAYPIDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPAYVKTFVGPPHGIQVERDKLNKYGRGLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFVAEAIYKAQAETGEVKGHYLNATAGTCEEMMKRAVCAKELGVPIIMHDYLTGGFTANTSLAIYCRDNGLLLHIHRAMHAVIDRQRNHGIHFRVLAKALRMSGGDHLHSGTVVGKLEGEREVTLGFVDLMRDDYVEKDRSRGIYFTQDWCSMPGVMPVASGGIHVWHMPALVEIFGDDACLQFGGGTLGHPWGNAPGAAANRVALEACTQARNEGRDLAREGGDVIRSACKWSPELAAACEVWKEIKFEFDTIDKL", - "output": "chloroplast ; magnesium ion binding ; monooxygenase activity ; ribulose-bisphosphate carboxylase activity ; photorespiration ; reductive pentose-phosphate cycle" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MNIIIMIIIAYLLGSIQTGLWIGKYFYQVNLRQHGSGNTGTTNTFRILGVKAGIVTLTIDILKGTLATLIPIILGITTVSPFFIGFFAIIGHTFPIFAQFKGGKAVATSAGVLLGFAPSFFLYLLVIFLLTLYLFSMISLSSITVAVVGILSVLIFPLVGFILTDYDWIFTTVVILMALTIIIRHQDNIKRIRKRQENLVPFGLNLSKQKNK", - "output": "plasma membrane ; acyl-phosphate glycerol-3-phosphate acyltransferase activity ; phospholipid biosynthetic process" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MLQPKRTKFRKVHKGRNRGLAQGTDVSFGTFGLKAVGRGRLTARQIEAARRAMTRAVKRQGKIWIRVFPDKPITEKPLAVRMGKGKGNVEYWVALIQPGKVLYEMDGVPEELAREAFKLAAAKLPIKTTFVTKTVM", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; tRNA binding ; translation" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MTCPICGSKTAPSYRPFCSKRCADLDLAKWLNGSYAIPASSEDEEEPLDQEAETPVAPRH", - "output": "DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) inhibitor activity ; zinc ion binding ; regulation of DNA-templated transcription" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MHKLKLHGFNNLTKSLSFCIYDICYTKTADDRDGYIAYIDEQYNANRLTEILTETCSIIGANVLNIARQDYDPQGASVTILVSEEPIDPRDVDTSEHPGPLPNSVVAHLDKSHICVHTYPESHPEGGLCTFRADIEVSTCGVISPLKALNYLIHQLESDIVTIDYRVRGFTRDINGVKHFIDHQINSVQNFMSEDMKSLYHMMDVNVYQENIFHTKMLLKDFDLKHYLFNVNPEELSAAERKRITDLLYHEMQEIYYGRNLPVL", - "output": "adenosylmethionine decarboxylase activity ; spermidine biosynthetic process" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MVAALLGGGGEARGGTVPGAWLCLMALLQLLGSAPRGSGLAHGRRLICWQALLQCQGEPECSYAYNQYAEACAPVLAQHGGGDAPGAAAAAFPASAASFSSRWRCPSHCISALIQLNHTRRGPALEDCDCAQDENCKSTKRAIEPCLPRTSGGGAGGPGAGGVMGCTEARRRCDRDSRCNLALSRYLTYCGKVFNGLRCTDECRTVIEDMLAMPKAALLNDCVCDGLERPICESVKENMARLCFGAELGNGPGSSGSDGGLDDYYDEDYDDEQRTGGAGGEQPLDDDDGVPHPPRPGSGAAASGGRGDLPYGPGRRSSGGGGRLAPRGAWTPLASILLLLLGPLF", - "output": "membrane ; plasma membrane ; cell cycle ; cell fate commitment ; cellular response to vascular endothelial growth factor stimulus ; developmental growth ; negative regulation of mitotic cell cycle ; negative regulation of protein processing ; regulation of apoptotic process ; regulation of ER to Golgi vesicle-mediated transport ; regulation of smoothened signaling pathway" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MLTDTLIQEFQDRNLISQITNEIDLKNILLHNKISLYCGFDITADSLHVGHILPLLCLRRFQNLGHRPVILMGGGTSLIGDPSFKLLERQLNSIELVHTWKQKITKQLSLFLKFNVGKNNALIVDNYEWFKNINVLTFLRDIGKHFSINQMIVRDAIQRRIKRLDQGISFTEFSYNLLQAYDFYFLNKQLDVILQIGGSDQWGNIISGIDLIRRLHKKRAYGITVPLLTKKDGRKFGKTELDTIWLDKMKTSPYKFYQYWMNISDSDIYSFLKMFTFLSLSEIKALKDTTKPTELNSVKKILAEYLTNLVHGSNEVRAIQRITSSLFSGKFSEMKETDFFQLEQDGMPSVQLYNSGNLQQLLVYSRLALSRSHAKSMIVSNSVRINNIIQNNPFYILCNRDKMYHKYTLLSRGKKNFCLLCWTK", - "output": "cytoplasm ; ATP binding ; RNA binding ; tyrosine-tRNA ligase activity ; tyrosyl-tRNA aminoacylation" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MLQPKRTKFRKVHTGRNRGLAKGTEVSFGSFGLKAVGRGRLTARQIEAARRAMTRHIKRQGKIWIRVFPDKPITEKPLEVRQGKGKGNVEYWVAQIQPGKVMYEVDGVPEELAREAFRLAARKLPFKTTFVTKQVM", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; tRNA binding ; translation" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MIKLTRRQIIRRTAGTLFALSPIASAVAKTVRAPQFTAARIWPSHTYTRLTLESTAALKYQHFTLDNPGRLVVDIQNANINTVLHGLSQKVMADDPFIRSIRAGQNTPTTVRLVIDLKQPTHAQVFALPPVGGFKNRLVVDLYPHGMDADDPMMALLNGSLNKTLRGSPEADLAQNTTPQPGRGRNGRRPVIMLDPGHGGEDPGAISPGGLQEKHVVLSIARETKNQLEALGYNVFMTRNEDVFIPLGVRVAKGRARRADVFVSIHADAFTSPSARGTGVYMLNTKGATSSAAKFLEQTQNNADAVGGVPTSGNRNVDTALLDMTQTATLRDSRKLGKLVLEELGRLNHLHKGRVDEANFAVLRAPDMPSILVETAFLSNPAEEKLLGSESFRRQCAQSIASGVQRYINTSVLKRG", - "output": "outer membrane-bounded periplasmic space ; N-acetylmuramoyl-L-alanine amidase activity ; cell wall organization ; peptidoglycan catabolic process" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MAEGQVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALERLKVLDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKMHYRKKKQILRLRKQAEKNVEKKICKFTEVLKTNGLLV", - "output": "cytoplasm ; cytosol ; cytosolic large ribosomal subunit ; cytosolic ribosome ; GAIT complex ; postsynapse ; presynapse ; ribonucleoprotein complex ; ribosome ; synapse ; mRNA binding ; structural constituent of ribosome ; cellular response to type II interferon ; cytoplasmic translation ; homeostatic process ; lung morphogenesis ; macrophage chemotaxis ; negative regulation of formation of translation preinitiation complex ; negative regulation of translation ; response to lipopolysaccharide ; translation at postsynapse ; translation at presynapse" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MRHSVLSISFAVALFLECYTPSTAIPIGKMDDVALEQDTLDSLLRVEVSENSPDSVRGRSSKIVLLADSGLWMNLNRGLPFYKLRAAAAGPDRALTLDRQEAGQDLSPSISIVRRDTMRCMVGRVYRPCWEV", - "output": "synapse ; melanin-concentrating hormone activity ; chemical synaptic transmission ; neuropeptide signaling pathway" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MGKDTIADIITSIRNADMNRKGTVRIASTNITENVVKILLREGFIENARKLVENKNKKEFLVLTLRHRRNRKGPYRPILNLKRISRPGLRIYFNYRRIPRILDGMGIVILSTSRGIMTDRAARLERIGGEILCYIW", - "output": "chloroplast ; ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MTASPDYLVVLFGITAGATGAKLGSDEKELILLLWKVVDLANKKVGQLHEVLVRPDQLELTEDCKEETKIDAENLSSAPQLDQALRQFNQSVSNELNIGVGTSFCLCTDGQLHIRQILHPEASKKNVLLPECFYSFFDLRKEFKKCCPGSPDIDKLDVAAMTESLNFEKSDSVSRYGASQVEDMGNIILAMISEPYNHRFSDPERVNYKFESGTCKMELIDDSTVVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKELLGKRYIELFRSTAAEVQQVLNRFSSAPLIPLPTPPIIPVLPQQFVPPTNVRDCIRLRGLPYAATIEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSTDRAFMAAQKYHKKTMKDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPPPCKLPCLSPPSYTFPAPTAVIPTEAAIYQPSLLLNPRALQPSTAYYPAGTQLFMNYTAYYPSPPGSPNSLGYFPTAANLSSVPPQPGTVVRMQGLAYNTGVKEILNFFQGYQYATEDGLVHTNDQARTLPKEWVCI", - "output": "nuclear body ; nucleoplasm ; nucleus ; ribonucleoprotein complex ; mRNA binding ; alternative mRNA splicing, via spliceosome ; branching involved in salivary gland morphogenesis ; epithelial cell proliferation ; epithelial tube branching involved in lung morphogenesis ; positive regulation of epithelial cell proliferation ; regulation of inner ear auditory receptor cell fate specification ; regulation of RNA splicing" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MSRRYFGTDGIRGRANGLITPELALKVGQAAGLVFQRGDHRHRVVIGKDTRLSGYMIENAMVAGFTSVGMDVLLVGPMPTPAVAMLTKSMRADLGVMISASHNMFEDNGIKLFGPLGFKLSDDVEKQIEQLLDEPMDKKLSESASLGRARRIDGVHDRYIEFAKRTLPRDLSLDGLRVVVDCANGAAYKVVPEALWELGADVISIGVEPDGFNINKECGSTSPEALCRKVREMRADIGIALDGDADRVIMVDERGHVIDGDQLLAVIAQSWKEDGRLARPGIVATVMSNLGLERFLASEGIELVRTSVGDRYVLEAMLRDGYNVGGEASGHIILSDYATTGDGFVAALQILAVVQKLGRPVSEVCHRFDPLPQILKNVRYRAGRPLDDAGVQSAISDAEKRLNGHGRLLIRPSGTEPVIRVMGEGEDRIMVEEVVDTIVDALGNASAAAA", - "output": "magnesium ion binding ; phosphoglucosamine mutase activity ; carbohydrate metabolic process" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MSSRYLFTSESVTEGHPDKICDQISDTIIDAILAQDPQSRVAAEVVVNTGLVLITGEITTKAQVNYIELARKKIADIGYVHAENGFSADSCSVLVALDEQSADIAQGVDKAQETRELLSEEELDAVGAGDQGLMFGFACNETPELMPLPISLAHRVCRQLTAVRKTGQLPYLRPDGKSQVTITYEDGRPVGIDTILISTQHTAKIGEITELSDIQAKIKEDLWKYVVEPIFKDAEIKPNSQTRFLVNPTGKFVIGGPQGDCGLTGRKIIIDTYGGYSRHGGGAFSGKDPTKVDRSAAYACRYIAKNIVAADLAEKCEVQISYAIGVAKPVSMMIETFGTSKVDEDKLLEVVKENFELRPAGIIQNFNLRNLPGERGGRFYQDVAAYGHLGRTDLDLPWEQTDKVELLKQAFSPQLLATAS", - "output": "cytoplasm ; ATP binding ; magnesium ion binding ; methionine adenosyltransferase activity ; one-carbon metabolic process ; S-adenosylmethionine biosynthetic process" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MRHKRSTRRKRASATQLYQTCKASGTCPPDVIPKVEGTTIADQILRYGSLGVFFGGLGIGTGSGTGGRTGYVPLGSTPPSEAIPLQPIRPPVTVDTVGPLDSSIVSLIEESSFIDAGAPAPSIPTPSGFDITTSADTTPAILNVSSIGESSIQTVSTHLNPSFTEPSVLRPPAPAEASGHLIFSSPTVSTHSYENIPMDTFVISTDSGNVTSSTPIPGSRPVARLGLYSRNTQQVKVVDPAFLTSPHRLVTYDNPAFEGFNPEDTLQFQHSDISPAPDPDFLDIVALHRPALTSRRGTVRYSRVGQKATLRTRSGKQIGAKVHYYQDLSPIQPVQEQVQQQQQFELQSLNTSVSPYSINDGLYDIYADDADTIHDFQSPLHSHTSFATTRTSNVSIPLNTGFDTPLVSLEPGPDIASSVTSMSSPFIPISPLTPFNTIIVDGADFMLHPSYFILRRRRKRFPYFFADVRVAA", - "output": "host cell endosome ; host cell Golgi apparatus ; host cell nucleus ; viral capsid ; DNA binding ; structural molecule activity ; microtubule-dependent intracellular transport of viral material towards nucleus ; viral entry into host cell ; viral penetration into host nucleus" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MSWQAYVDDHLMCDIEGHEGHRLTAAAIVGHDGSVWAQSATFPQFKPEEMNGIMTDFNEPGHLAPTGLHLGGTKYMVIQGEAGAVIRGKKGSGGITIKKTGQALVCGIYEEPVTPGQCNMVVERLGDYLLEQGL", - "output": "cytoplasm ; cytoskeleton ; actin binding" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MNNKVNTRDFIVVKGARENNLKNVDIDIPKNKFVVMTGLSGSGKSSLAFDTIYAEGQRRYLESLSSYARQFLGGNEKPDVDSIEGLSPAISIDQKTTSHNPRSTVGTVTEIYDYLRLLFSRIGKPYCPNGHGLISTLSIKQMIDTVYENKEESKIQILSPIISQEKGTFKNKIEELKRQGYLRLRIDGNIYSLDDEIELEKTKKHNIDILIDRIILNNDTVTRSRIYDAIEKSVKEANGKVIVLVDDKELFFSQNHACNECGFSIPELEPRFFSFNSPVGACKSCNGIGFNFLPDTAKIVPDPSLSIKEGAIAYFRSVMMTPTMDLKREMSVWKEHDINLDVPFKELSKKEKNIIFYGDEDIGELKIDVNEQSIYSSSSFLYNNGLVNLIMRRFSETQSERAREYYEKFMSNLSCPSCNGQKLSIEALSVKINNKNIIDLTEKNINDLTNFFIELELNETDRNIAHLALKEIVDRLSFLENVGLNYLTLSRSASTLSGGESQRIRLATQIGSSLTGVLYVLDEPSIGLHQKDNEKLIETLKKMRDLGNTLIVVEHDEDTIRASDYLIDIGPKAGDFGGEVVAAGTVSEVSENKKSITAQYLSGKLKIEVPSKRRHGNGKTIELVGASGNNLKNVTVSFPLNKLIAVTGVSGSGKSTLINETLIKGIEKKLTNPFIVPAPFKDIKGLKNVDKIIKVSQDPIGRTPRSNPATYVSVFDDIRDLFANTKEAKARGFQKGRFSFNVSGGRCENCSGDGLIKIEMHFLPDVFVKCESCNGKKYNQETLQVLYKGKSIYDVLEMSVVEARDFFYEIPEIKRKLDLMVEVGIDYLKLGTSSTHLSGGEAQRIKLAKYLQKRATGKTIYVLDEPTTGLHIHDIAKLITVLNRIVDNGDTVIVVEHNLDLIKCADYVIDLGPDGGINGGQLVAYGTPEEIIEKKAVSYTGLFLEKNMYKDK", - "output": "cytoplasm ; excinuclease repair complex ; ATP binding ; ATP hydrolysis activity ; DNA binding ; excinuclease ABC activity ; zinc ion binding ; nucleotide-excision repair ; SOS response" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MRSPRVIHLACVIAYIVAVEAGDKPVYLPRPTPPRPIHPRLAREVGWELEGQGLSPLSEAELLPEVRERRSPVDKGGYLPRPTPPRPVYRSRRDASLESELSPLSVAEVLPEVRERRSPVDKGGYLPRPTPPRPVYRSRRDASLESELSPLSEAEVLPEVRERRSPVDKGGYLPRPTPPRPVYRSRRVASLESELSPLSEAEVLPEVRERRSPVDKGGYLPRPTPPRPVYRSRRDASLESELSPLSEEEVLPEVRERGSPVDKGGYLPRPTPPRPVYRSRRDASLESELSPLSVAEDLPEVRERRSPVDKGGYLPRPTPPRPVYRSRRDASLESELSPLSEAEVLPEVRERRSPVDKGGYLPRPTPPRPVYRSRRDASLESELSPLSEAEVLPEVRERRSPVDKGGYLPRPTPPRPVYRSRRDASLESELSPLSEAEVLPEVRERRSPVDKGGYLPRPTPPRPVYRSRRDASLESELSPLSEAEVLPEVRERRSPVDKGGYLPRPTPPRPVYRSRRDATLESELSPSSEAEVLPEVRERRSPVDKGGYLPRPTPPRPVYRSRRDASLESELSPLSEAEVLPEVRERRSPVDKGGYLPRPTPPRPVYRSRRDASLESELSPLSEAEGLPEVRERRSPGGQGGYLPRPTPRTPLCRSRRDANLDAEQSPVSEGVVLPEVR", - "output": "extracellular region ; defense response to bacterium ; innate immune response" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MRSKFKDEHPFEKRKAEAERIRQKYADRIPVICEKVEKSDIATIDKKKYLVPSDLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFGNFETA", - "output": "autophagosome membrane ; cytoplasmic vesicle ; autophagy ; protein transport" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MIALATGPRYRVPFRRRREGKTNYYKRRELIKADAPRLVARKTLNHNIAQIVDFAPHGDVTLASAHSIELRNKFGWKGHCGNTPAAYLTGYLCGLRALERGIERAVIDIGLHRPVRGSRVFAMLKGALDAGMDIPHGEEVLPPEDRIRGEHIANLARQIKEEDPEEYERRFSKYLERGLKPEELPEHFEEVKSKIEEEFGGA", - "output": "ribonucleoprotein complex ; ribosome ; 5S rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MTDRNEFLNDINKIVIKIGTSSLTKQNCDSTKENCSIDPTFIENIAAQVSELRKLGKEVIVVSSGAIGVGLYELGIAPKPREIPIRQAAAAVGQSILMQYWSEAFSKHGIKVAQILLTYEFYSDRVSYLNLRNSISTLLEYGVVPIINENDCTCTNEIEAIFGDNDKLSAMVASKIDADLLIILSDIDGLFDKNPKIHEDARLISLVEKITPEIESYGGDPTSFKGVGGMRTKIKAAKICSMAGCYVLIANSEIEDVLLKVLSGKEIGTLFLAERHIQKNRARWIILSRASGTIRVDAGAKAAVLGKNSLLSAGVVDVEGNFDRGDVVRLECEGRVFAKGITDYTSEELMKIKGAHTDEIEGILGYNNYSNVIKKENIGIMEN", - "output": "cytoplasm ; ATP binding ; glutamate 5-kinase activity ; RNA binding ; L-proline biosynthetic process ; phosphorylation" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MGIEGVLERGVVTTTADKLINWARTGSLWPMTFGLACCAVEMMHAGASRYDMDRFGVIFRPSPRQSDVMIVAGTLVNKMAPALRKVYDQMSEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGIIQLQNKIKRNYTIAR", - "output": "plasma membrane ; 4 iron, 4 sulfur cluster binding ; iron ion binding ; NADH dehydrogenase (ubiquinone) activity ; quinone binding" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MIKLVLLRHGESQWNRENRFTGWYDIGLSEKGETESRAAGELLKKEGFTFDVAFTSVLKRAIGTLWNVLEGMDLMWIPVFKNWRLNERHYGALQGMNKAETAQQHGDEQVLVWRRSYDTPPPPLEKNDPRFPGNDPRYATLAPEEVPVTECLKDTVDRFLPLWNDEIAPMIRSGKRVIIAAHGNSLRALVKYLDNISEEDIVGLNIPTGVPLVYELDDDLKPLKSYYLGDQEELQKAIDSVANQGKA", - "output": "2,3-bisphosphoglycerate-dependent phosphoglycerate mutase activity ; gluconeogenesis ; glycolytic process" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MKYNQYAYVETDFQQQVKELIDINFLPKNYQVWDFSSLLAKLVKNAIAEAKTDAAKNAKLAEFAVSDHQTLADFLKEKPTEIGTKQFYNVALQLLGYHVHYDYDFADPTGFMQRNALPFLQDISDNQKLISAFYRLLNTRAKNGQILLDVMAGKGYFTQFWGQNKFKFFNGKSIPVFDTNKVIREVVYVETDLDTDHDGKSDLIQVTVFRPEETNKGLKVPALYTASPYFGGIIANEKRNHNVDENLSDSTEWNDPQYVHSPIVKAEKPDGSSRPATEEAVHKSSYPLNEYMLARGFASVFAGAIGTRGSDGVRITGAPEETESAAAVIEWLHGDRVAYTDRTRTVQTTADWCNGNIGMTGRSYLGTLQIAIATTGVKGLKTVVSEAAISSWYDYYREHGLVIAPEACQGEDLDLLAETCQSNLWDAGSYLKIKPEYDKMQKQLREKEDRNTGQYSDFWEARNYRHHADGIKCSWISVHGLNDWNVKPKNVYKIWQLVKKMPMKHHLFLHQGPHYNMNNLVSIDFTDLMNLWFVHELLGIENNAYNQWPTVMIQDNLQADKWHEEPDWSNDLGQEKIYYPTDEGELFQDGNGKAQKSFTDVGGIEFKKAGISESDWQYKFICGDEKWAKPSLRFETDEFTHPTTIVGRPEVKVRVSASLPKGEISVALVELGERQRLTATPKFLMHGGQELGYRFGTDTLQEFVPDKKTKAKLITKAHMNLQNFKDMKKPEAIDADKFYDLDFLLQPTYYTIPSGSKLALIIYSTDQGMTKRPLEDETYTIDLANTEIKFYEK", - "output": "cytoplasm ; aminopeptidase activity ; dipeptidyl-peptidase activity ; serine-type peptidase activity ; proteolysis" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MRLLLLVGVLLAATWQVGYTRAPTFPDKSKSAADAINEPKGEHVCTVKTIVDDYELRKVIHQVVYNDTEQCLNPLTGFQCVVEKRGQKASYQRQLVQKEKYIKQCCEGYYQTKDNQCQPDCNPPCKKGKCVEPGKCECDPGFGGKICSSSCSIGTWGLGCSKKCDCENGANCDPELGDCICPSGFQGKRCEEECPIDKWGPNCVKSCPCQNGGKCNHEGKCVCTDGWGGEYCLNKCEEGKFGADCKFECTCQNGATCDNTNGKCLCKSGFHGALCEKPCSEGFFGAGCTQKCQCLNNQDCDSETGECKCIGWTGKQCDIGCARGRFGLQCKQKCTCPGLEFQDSNASCDAKTGECQCESGYKGANCDERKCSADTYGADCSKQCSCVMSNTVMCAPNTGFCRCKPGFYGDNCELACSKDSYGPNCEKQAMCDWTHASEADPANGKCVCKSGRSGANCSQPCPIDFYGPNCALQCECNGRGIGCHGFDGKCNCAPGYTGHRCEHHCPALTFGANCEKRCQCPAGVGCNPITGECECPAGRQGLKCDISCPEGSYGPECKLHCKCVNGKCDPETGECSCEPGFGGADCSTSCPKGKYGDACELSCDCSDSYCSRQTGKCICPLGKKGTLCDQPCEANTYGPQCQLTTTPSQCASTDPRNGVCLTCPPGSSGHQCEQNCPQGTYGTDCASKCACADGGHGCDPTTGECICEPGYHGATCSEKCPDGKFGYACAQNCPKCAAGSSCDHISGQCVCPAGLEGATCTRPCGVGFWGNGCRQVCRCTSEFKQCNAQTGECSCPAGFQGDRCDKPCEDGYYGPDCIKKCKCQGTATASCNRVTGVCICHPGFTGEFCHALCPESTFGLRCSKECPKDGCGDGYECDAAIGCCHVDQMSCGKAKQEFEALNGGRAKSSGATWLLILFIIGLCGVLGLAALFYRNKYQKEKDPDMPTVSFHKSPNAEDNREFQNPLYNRQSVFPDSGAFSGSSEGGVGAAPDGLLTLEEEDLEDKKIHGGGASRNMRNHDYASLDEVAGGEGGPATSSSSGVQNRRGQNSGDVRRPLLNSEDVDDDDEDEDFEEIPHENRNSTQKLSLERNSKFSEKNFKKKFLSENPYAHIPSPDPNIQNSTNSRRAQENLYT", - "output": "cell surface ; phagocytic vesicle membrane ; plasma membrane ; scavenger receptor activity ; actin cytoskeleton reorganization ; apoptotic process ; cellular response to unfolded protein ; defense response to bacterium ; engulfment of apoptotic cell ; establishment of protein localization ; phagolysosome assembly ; programmed cell death" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MTELARLKFYATQPHSCSYLPEEQATTLFLDPSQPMDVHVYADLSEMGFRRSGDHLYRPHCQNCNACVPARIPVAQFNPNRQQKRIFKRNVDLQVRPVKPAFSEEYFDLYQRYIEQRHADGDMYPPSRDQFSTFLVRDLPFSRFYEFRLDGRLLAVAVTDLLPNGLSAVYTFYEPQEERRSLGRYAILWQIAEAQRLGLEAVYLGYWIKNCKKMNYKTQYRPIELLINQRWVVLN", - "output": "cytoplasm ; arginyltransferase activity ; leucyltransferase activity ; ubiquitin-dependent protein catabolic process via the N-end rule pathway" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MYLKSLQLRYFRNYREQVIDFAAPKTILVGQNAQGKSNLLEAVELLSTLRSHRSHRDRELVLSGQENGQIIATIERDSGPLDLTLNLRSNGRRTLMVNSEPVRRHLDFLGHLNAVEFSSLDLDLVRGTPAERRNWLDNVLIQLEPFYAHLLQQYNHVLRQRNAFLKSYQREGSLDHTELKLWDQQLASTGTRLTRRRQRLLVRLAPLATHWHQAISGKNEDLQVHYAPNVPLEGDEPEAIYQAFLEKLQQKAIAEQHQGTSLVGPHRDEVELIINQTPARQYGSQGQQRTLVLALKLAELKLIEEVIGEPPLLLLDDVLAELDLQRQNQLLETIQDRFQTLITTTHLGAFDAQWLKSAQILEVAGGVIFNSNHCDRR", - "output": "cytoplasm ; ATP binding ; single-stranded DNA binding ; DNA repair ; DNA replication ; SOS response" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MHLQVYIVNGKRQYTLKKMDPEGKPTLSAHPARFSPDDKYSRHRITIKRRFKALKSEKRPKPL", - "output": "nucleolus ; ribonucleoprotein complex ; snoRNA binding ; pseudouridine synthesis ; rRNA processing" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MKHTVEVMIPEAEIKARIAELGRQITERYKDSGSEMVLVGLLRGSFMFMADLCREVQVPHEVDFMTASSYGSGMSTTRDVKILKDLDEDIRGKDVLIVEDIIDSGNTLSKVREILGLREPKSLAICTLLDKPSRREVDVPVEFVGFSIPDEFVVGYGIDYAQRYRHLPYVGKVVLLDE", - "output": "cytosol ; guanine phosphoribosyltransferase activity ; hypoxanthine phosphoribosyltransferase activity ; magnesium ion binding ; nucleotide binding ; GMP salvage ; guanine salvage ; hypoxanthine metabolic process ; IMP salvage ; purine ribonucleoside salvage" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MAHCLAAVSSFSPSAVRRRLSSQVANVVSSRSSVSFHSRQMSFVSISSRPSSLRFKICCAAMGEAQAKKETVDKVCMIVKKQLAVPDGTPVTAESKFSELGADSLDTVEIVMGLEEEFNITVDETSAQDIATVQDAANLIEKLVTEKTA", - "output": "chloroplast ; acyl carrier activity ; phosphopantetheine binding" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MNYALETNDKEIFDLIHEELDRQNTHLEMIASENFTFPAVMEAMGSVLTNKYAEGYPYKRYYGGCEFVDRVEEIAIERAKKLFGCGFANVQPHAGSQANVAVYNALLKPYDKILGMDLSHGGHLTHGAKVSVTGQTYQSFFYGVELDGYINYDKVEEIAKIVKPQMIVCGFSAYARELDFKRFREIADSVGALLLGDVAHVAGLIVAGEYPNPFPHCHIVTTTTHKTLRGPRGGMILTNDEEIAKKIDKAVFPGMQGGPLMHVIAAKAVGFGENLKPEWKEYAKQVKANAKVLAKVLMARGYTLVSGGTDNHLILVSLLDKEFSGKDADRALGEAGITVNKNTVPGETRSPFVTSGVRIGSAALTARGMREKEFEFIATKIADVLDDVNNAAKHAEIKKEIAEFAKGFPVYTKAIF", - "output": "cytoplasm ; glycine hydroxymethyltransferase activity ; pyridoxal phosphate binding ; glycine biosynthetic process from serine ; tetrahydrofolate interconversion" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MINEIRKDAEIRMEKCVDAFKSHISKVRTGRASPSLLDGIQIDYYGLLTPLRQLANIIAEDSRTLAITVFDRTLAPAVEKAIMASDLGLNPSSAGTVIRVPLPPLTEERRRDLIKVVRAEAEQGRVSVRNVRRDANDKVKALLKDKTIGEDEDRRSQDEIQKLTDAWIKKLDSALAEKEAELMEI", - "output": "cytoplasm ; translational termination" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MSDTIRTLQGRVLSDKMDKSITVAIERKVKHPLYGKFIKRTTKIHAHDEQNQCNAGDIVTIRECRPLSKTKSWTLVEVVTKA", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MNYAYPDEKGHYGIYGGRYVPETLMQSVLELEEAYKEAMEDEAFQKELNHYLKTYVGRETPLYFAENMTEYCGGAKIYLKREDLNHTGAHKINNTIGQALLAVRMGKKKVVAETGAGQHGVATATVCALLGLECVIFMGEEDVRRQKLNVFRMELLGAKVESVAAGSGTLKDAVNEALRYWVSHVHDTHYIMGSVLGPHPFPQIVRDFQSVIGNETKKQYEALEGKLPEAVVACIGGGSNAMGMFYPFVHDEEVALYGVEAAGKGVHTEKHAATLTKGSVGVLHGSMMYLLQNEEGQIQEAHSISAGLDYPGVGPEHSLLKDIGRVSYHSITDDEALEAFQLLTKKEGIIPALESSHAVAYALKLAPQMKEDEGLVICLSGRGDKDVESIKRYMEEV", - "output": "tryptophan synthase activity" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MKMSIRTPPRLLELAGRSLLRDQALAMSTLEELPTELFPPLFMEAFSRRRCEALKLMVQAWPFRRLPLRPLIKMPCLEAFQAVLDGLDALLTQGVRPRRWKLQVLDLQDVCENFWMVWSEAMAHGCFLNAKRNKKPVQDCPRMRGRQPLTVFVELWLKNRTLDEYLTYLLLWVKQRKDLLHLCCKKLKILGMPFRNIRSILKMVNLDCIQEVEVNCKWVLPILTQFTPYLGHMRNLQKLVLSHMDVSRYVSPEQKKEIVTQFTTQFLKLRCLQKLYMNSVSFLEGHLDQLLSCLKTSLKVLTITNCVLLESDLKHLSQCPSISQLKTLDLSGIRLTNYSLVPLQILLEKVAATLEYLDLDDCGIIDSQVNAILPALSRCFELNTFSFCGNPICMATLENLLSHTIILKNLCVELYPAPRESYGADGTLCWSRFAQIRAELMNRVRDLRHPKRILFCTDYCPDCGNRSFYDLEADQYCC", - "output": "Cul2-RING ubiquitin ligase complex ; ubiquitin ligase-substrate adaptor activity ; negative regulation of apoptotic process ; negative regulation of cell differentiation ; negative regulation of DNA-templated transcription ; positive regulation of cell population proliferation ; proteasome-mediated ubiquitin-dependent protein catabolic process ; protein ubiquitination" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MVFSYTEKKRIRKDFGKRPQVLDIPYLLSIQLGSFQKFVKKDPEGQNGLESAFRSVFPIKSYNGNAELRYLDYKLGEPVFDVKECQIRGMTFAAPLRVQLCLVIYERDGSAYNTIKRTQQQEVYMGEIPLMTDNGTFIINGIERVVVSQLHRSPGVFFDSDKGKTHSSGKILYTARIIPYRGSWLDFEFDLKDNLFVRIDRRRKLPVTVLLRALDYTNDQILNTFFNTVVYEFKDDLLFMNLVPERLRGETVSFDIKANDIIYVERGRRITSKHINKLKADNIIKVEVPLNYLMGKVIIKDYLDIKNGELIVAANTEISMDILHNLVKSGFNIIETLFSNDLDYGNYISETLRIDSTVTRFDALVEIYRVMRPGEPPTKEAAEYLFESLFFLEERYDLSDVGRMKFNRSLQRDDISGSGVLTKNDIIDVIKKLIDIRNGKGDVDDIDHLGNRRIRSVGEMAENQFRIGLVRVERAVKERLSLGDLDVLTPQDLINAKPISAAVREFFNSSQLSQFMDQNNPLSEITHKRRISALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYARTNKYGFLETPYRRVCDGKVSNDIHYLSAIEEGDFIIAQANTNLNKDGQFIDDLITCRNKGESGLFRKDQIDYMDVSTQQIVSVAASLIPFLEHDDANRALMGANMQRQAVPVIRSEKPLVGTGMERSVAVDSGVTVVAKRGGMVKYVDASRIVIHVNVNEISVEEAGIDIYNLKKYVRSNQNTCINQRPCVELGELIKKGDVIADGPSTDLGELALGQNMRIAFMPWNGYNFEDSMLVSERVVQEDRFTSIHIQELSCISRDTKLGPEEITSDIPNIGETALSKLDEVGVVYIGAEVVGGDILVGKITPKGETQLTPEEKLLRAIFGEKASDVKDSSLRVPNGICGTVIDVQIFTRDGIKKDKRALNIELTKLNQIKKDLGEELKIFESALFDRVYALLISSGVKKESLLDMNRCAWLNLKLKDITKQNQLLQLSHQYLDLKRIFEEKISIQYQKITQGDELAPGILKVVKVYLAVKRQIQPGDKMAGRHGNKGVISKINPVEDMPYDEYGVPVDIVLNPLGVPSRMNIGQILETHLGMAAKGIGDQINLMLQQHQEINKLRKFIQKAYKLGVGVRQNIDLNTFSDLEVLRLAKNLKSGMPIATPVFDGATEQEIKELLQLSGLPTSGQITLFDGCTGEVFERKVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGASYTLQEMLTVKSDDVNGRTKMYKNIIDGNHMMEPGMPESFNVLLKEIRSLAINIELDD", - "output": "DNA-directed RNA polymerase complex ; DNA binding ; DNA-directed 5'-3' RNA polymerase activity ; ribonucleoside binding ; DNA-templated transcription" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MKLNDVTRGTGLEEHGIINANLIYWTPPTAVLYEQIVERGEGLVSHLGALAVKTGHYTGRAANEKFIVDEPTSRDHINWGKVNRPFDPEKFDSLYKRMTAYMHGKDLFIQDCFAGASPKHRLPIRVIAEKAWHSLFARNMFVKATAAELENHKPRFTVIDMPNFHAVPQIDGTNSETFIIINFAKRLVIIGGTSYAGEIKKSIFTVLNYLLPHHSKVMSMHCSANTGEKGDVAVFFGLSGTGKTTLSAAPNRSLIGDDEHGWDDDGVFNFEGGCYAKIINLSKESEPEIYETTRKFGTILENVAIDTISRRIDLNDDSFTENTRASYPITHIPNIVPSGMGGHPTNVIMLTCDAFGVLPPIARLTPEQAMYHFLSGYTAKVAGTEAGITEPQATFSTCFGAPFMALHPSVYAELLKAKIARHKVNCWLVNTGWSGGAYGVGSRMKIGYSRALVNAALDGTLAAGQFEKDSVFGLDIPRACPGVPGEVLNPRNVWADKAAYDATAKDLVEMFRKNFEQFKANVSQEVACVL", - "output": "cytoplasm ; ATP binding ; metal ion binding ; phosphoenolpyruvate carboxykinase (ATP) activity ; gluconeogenesis" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MSATLPDVAVTEAFTLSAPLRWVGMQDIAIPVHLDAASGSGLAARASVQVDLPRAELKGIHMSRLYRLLDLHLQRPLSPAMLPQLLQALIESHADCASRAARLTLSFALMLRMPALRSEGLSGWRAYPVRIAAQCRAGRTTIQLQVEVLYASTCPCSAALSRQLLSDAFVQQHAWCDALPLQDVAQWLQDHGSYATPHSQRSVAQVCVDLPADTQGFAIQELIGLCEQALATPVQAAVRRPDEQAFARLNGANLMYVEDAARRLRKQLAEHYATFHVAVRHLESLHAHDAVAETGSDDETFFPAAL", - "output": "GTP cyclohydrolase I activity ; 7,8-dihydroneopterin 3'-triphosphate biosynthetic process" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MANYDVLKLDGTKSGSIELSDAVFGIEPNNSVLFEAINLQRASLRQGTHAVKNRSAVSGGGRKPWKQKGTGRARQGTIRAPQWRGGGIVFGPTPRSYAYKMPKKMRRLALRSALSFKAQENGLTVVDAFNFEAPKTKEFKNVLSTLEQPKKVLVVTENEDVNVELSARNIPGVQVTTAQGLNVLDITNADSLVITEAAAKKVEEVLG", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MEVIQYPNSPFKLHQPFPPAGDQPTAIAGLLEGLSDGLAYQTLLGVTGSGKTYTMANVIAQSGRPAIIMAHNKTLAAQLYAEMREFFPENAVEYFVSYYDYYQPEAYVPSRDLFIEKDSAINEHIEQMRLSATKNLMTRNDVIIVATVSAIYGIGDPTEYQQMVLSVKEGDTIEQRDIIATLVSMQYERGDLDFKRGSFRVRGDVIDVYPAESSENALRISLFDDEIDRLDMFDPLSGSLIQRVGRYTVFPSSHYVTPRDTVLRACESIKEELRERIEFFAREQRPVEQQRIEQRTRFDLEMLYEMGFCKGIENYSRHFSGKKEGEPPPTLMDYLPDNAIMFIDESHVTVTQIGGMYKGDASRKQNLVDYGFRLPSARDNRPLKFHEFEKVMPQTIFVSATPAKYEEEHAGQVVEQVVRPTGLVDPQIIIRPVATQVDDLMSEINDRIEKGERVLVTTLTKRMAEQLTDYYSELGIKVRYLHSDIDTVERVEIIRDLRLGLFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSHRSLIQTIGRAARNVNGVAILYADKITDSMKAAIDETERRREKQIKFNEEQGIVPQQIKKQVKDIIDGVYHEEDGSKGRLKGKNKVKVGEIHNEEDAIKEIAKLEKAMQQAARDLQFEEAAVLRDRIRDIKENLLFGAE", - "output": "cytoplasm ; excinuclease repair complex ; ATP binding ; ATP hydrolysis activity ; DNA binding ; excinuclease ABC activity ; nucleotide-excision repair ; SOS response" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MGLHPCSPVDHGVPSWVLVLLLTLGLCSLQATADSVLDPDFRENYFEQYMDHFNFESFSNKTFGQRFLVSDKFWKMGEGPIFFYTGNEGDIWSLANNSGFIVELAAQQEALLVFAEHRYYGKSLPFGVQSTQRGYTQLLTVEQALADFAVLLQALRHNLGVQDAPTIAFGGSYGGMLSAYMRMKYPHLVAGALAASAPVIAVAGLGNPDQFFRDVTADFYGQSPKCAQAVRDAFQQIKDLFLQGAYDTISQNFGTCQSLSSPKDLTQLFGFARNAFTVLAMMDYPYPTNFLGPLPANPVKVGCERLLSEGQRIMGLRALAGLVYNSSGMEPCFDIYQMYQSCADPTGCGTGSNARAWDYQACTEINLTFDSNNVTDMFPEIPFSDELRQQYCLDTWGVWPRPDWLQTSFWGGDLKAASNIIFSNGDLDPWAGGGIQRNLSTSIIAVTIQGGAHHLDLRASNSEDPPSVVEVRKLEATLIREWVAAARLKQPAEAQWPGPK", - "output": "cytoplasmic vesicle ; cytosol ; extracellular region ; lysosome ; vesicle ; aminopeptidase activity ; dipeptidyl-peptidase activity ; serine-type peptidase activity ; lysosomal protein catabolic process ; protein catabolic process ; proteolysis" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MSAPRKVRLPSVKAVDMSMEDMAARLARLESENKALKQQVLRGGACASSTSVPSAPVPPPEPLTARQREVMITQATGRLASQAMKKIEDKVRKSVDGVTTRNEMENILQNLTLRIQVSMLGAKGQPSPGEGTRPRESNDPNATRRARSRSRGREAKKVQISD", - "output": "host cell cytoplasm ; viral tegument ; DNA binding ; identical protein binding ; suppression by virus of host innate immune response" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MSDAKELKQVLTGPIVNNNPIALQVLGVCSALAVTSKLETALVMALALTAVTAFSNLFISMIRNHIPSSVRIIVQMTIIASLVIVVDQLLQAYAYQISKQLSVFVGLIITNCIVMGRAEAYAMKTPPMMSFMDGIGNGLGYGAILLAVGFVRELFGNGSLFGVEILHKISDGGWYQPNGLLLLPPSAFFLIGVLIWIIRTYKPEQVEAKG", - "output": "plasma membrane ; oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor ; sodium ion transport" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MAEGGAADLDTQRSDIATLLKTSLRKGDTWYLVDSRWFKQWKKYVGFDSWDKYQMGDQNVYPGPIDNSGLLKDGDAQSLKEHLIDELDYILLPTEGWNKLVSWYTLMEGQEPIARKVVEQGMFVKHCKVEVYLTELKLCENGNMNNVVTRRFSKADTIDTIEKEIRKIFSIPDEKETRLWNKYMSNTFEPLNKPDSTIQDAGLYQGQVLVIEQKNEDGTWPRGPSTPKSPGASNFSTLPKISPSSLSNNYNNMNNRNVKNSNYCLPSYTAYKNYDYSEPGRNNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQMWSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIVDIFHGLFKSTLVCPECAKISVTFDPFCYLTLPLPMKKERTLEVYLVRMDPLTKPMQYKVVVPKIGNILDLCTALSALSGIPADKMIVTDIYNHRFHRIFAMDENLSSIMERDDIYVFEININRTEDTEHVIIPVCLREKFRHSSYTHHTGSSLFGQPFLMAVPRNNTEDKLYNLLLLRMCRYVKISTETEETEGSLHCCKDQNINGNGPNGIHEEGSPSEMETDEPDDESSQDQELPSENENSQSEDSVGGDNDSENGLCTEDTCKGQLTGHKKRLFTFQFNNLGNTDINYIKDDTRHIRFDDRQLRLDERSFLALDWDPDLKKRYFDENAAEDFEKHESVEYKPPKKPFVKLKDCIELFTTKEKLGAEDPWYCPNCKEHQQATKKLDLWSLPPVLVVHLKRFSYSRYMRDKLDTLVDFPINDLDMSEFLINPNAGPCRYNLIAVSNHYGGMGGGHYTAFAKNKDDGKWYYFDDSSVSTASEDQIVSKAAYVLFYQRQDTFSGTGFFPLDRETKGASAATGIPLESDEDSNDNDNDIENENCMHTN", - "output": "cytoplasm ; cytosol ; mitochondrion ; nuclear body ; nucleoplasm ; nucleus ; cysteine-type deubiquitinase activity ; cysteine-type endopeptidase activity ; deubiquitinase activity ; enzyme activator activity ; identical protein binding ; K48-linked deubiquitinase activity ; SMAD binding ; transforming growth factor beta receptor binding ; ubiquitin modification-dependent histone binding ; BMP signaling pathway ; histone H2B conserved C-terminal lysine deubiquitination ; monoubiquitinated protein deubiquitination ; negative regulation of antifungal innate immune response ; pathway-restricted SMAD protein phosphorylation ; positive regulation of RIG-I signaling pathway ; protein deubiquitination ; protein K27-linked deubiquitination ; regulation of intrinsic apoptotic signaling pathway in response to osmotic stress by p53 class mediator ; transforming growth factor beta receptor signaling pathway ; ubiquitin-dependent protein catabolic process" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MERRKIMKITINYGKRLGKINKFWAKCVGSCHATTALREDWRKQLKKCRDELGFEYIRFHGWLNDDMSVCFRNDDGLLSFSFFNIDSIIDFLLEIGMKPFIELSFMPEALASGTKTVFHYKGNITPPKSYEEWGQLIEELARHLISRYGKNEVREWFFEVWNEPNLKDFFWAGTMEEYFKLYKYAAFAIKKVDSELRVGGPATAIDAWIPELKDFCTKNGVPIDFISTHQYPTDLAFSTSSNMEEAMAKAKRGELAERVKKALEEAYPLPVYYTEWNNSPSPRDPYHDIPYDAAFIVKTIIDIIDLPLGCYSYWTFTDIFEECGQSSLPFHGGFGLLNIHGIPKPSYRAFQILDKLNGERIEIEFEDKSPTIDCIAVQNEREIILVISNHNVPLSPIDTENIKVVLKGIENCREVFVERIDEYNANPKRVWLEMGSPAYLNREQIEELIKASELKKEKVSWGIVNNNEITFDLSVLPHSVVAVTIKNG", - "output": "xylan 1,4-beta-xylosidase activity ; xylan catabolic process" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MMLKPSIDTLLDKVPSKYSLVILEAKRAHELEAGAPATQGFKSEKSTLRALEEIESGNVTIHPDPEGKREAVRRRIEEEKRRKEEEEKKIKEQIAKEKEDGEKI", - "output": "DNA-directed RNA polymerase complex ; DNA binding ; DNA-directed 5'-3' RNA polymerase activity ; DNA-templated transcription" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MARYVFITGGVVSSLGKGIAAAALAALLQARGYRVRIRKLDPYLNVDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFTGRPANQQDNITTGRIYRNIIEKERRGDYLGATVQVIPHVTDEIKNFVLQGNEDYDFVLCEIGGTVGDIEAMPFLEAIRQLGNELPRGTAVYIHLTLMPYIPAAGELKTKPTQHSVKELRSIGIAPDILLVRADREIPESERRKLSLFCNVRESAVIQALDVATIYDVPIAYHKEGLDSEVLSAFGIDPAPKPRMDRWEEVSHRLHNPEGEVTIAVVGKYTGLKDAYKSLIEALHHGGLANKVKVNLDWIEAEVFESEDPAPYLEKVHGILVPGGFGERGAEGKILAAKFARERKVPYFGICFGMQMACIEAARNLVGIEDASSSEFGPTREPVVGLMTEWLKGNMLEKRAAAGDLGGTMRLGAYEAVLKPDSKIAQIYGSTDIHERHRHRYEVNIDYKDRLEAAGLNFAGMSPDGVLPETVEYADHPWFIGVQYHPELKSRPFEPHPLFASFIEAAIEQSRLV", - "output": "ATP binding ; CTP synthase activity ; glutaminase activity ; metal ion binding ; 'de novo' CTP biosynthetic process ; glutamine metabolic process" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MSFKSIFLTGGVVSSLGKGLTAASLALLLERQDLKVAMLKLDPYLNVDPGTMNPYEHGEVYVTDDGVETDLDLGHYHRFSSVQLSKYSIATSGQIYTKVLTKERNGEFLGSTVQVIPHVTNEIINVIQSCADHHKPDILIVEIGGTIGDIESLPFLEAVRQFRCEHPQDCLSIHMTYVPYLRAAKEIKTKPTQHSVQNLRSIGISPDVILCRSEAPLSTEVKRKISLFCNVPEHAVFNAIDLERSIYEMPLLLAKENISDFLLNKLGFSPKPLDLSDWQDLVEALCDKERQHVRIGLVGKYLEHKDAYKSVFEALFHASVPANCSLELVPIAPESEDLLEQLSQCDGCLIPGGFGTRSWEGKISAARYCREQNIPCFGICLGMQALVVEYARNVLDKPLANSMEMNPETPDPVVCMMEGQDSVVKGGTMRLGAYPCRIAPGSLASAAYKTDLVQERHRHRYEVNPSYIERLEEHGLKIAGVCPLGELCEIVEIPNHRWMLGVQFHPEFLSKLAKPHPLFIEFIRAAKAYSLEKANHEHR", - "output": "ATP binding ; CTP synthase activity ; glutaminase activity ; metal ion binding ; 'de novo' CTP biosynthetic process ; glutamine metabolic process" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MEDDAPVIYGLEFQARALTPQTAETDAIRFLVGTQSLKYDNQIHIIDFDDENNIINKNVLLHQAGEIWHISASPADRGVLATCYNRTSDSKVLTCAAVWRMPKELESGSHESPDDSSSTAQTLELLCHLDNTAHSNMACVVWEPMGDGKKIISLADNHILLWDLQESSSQAVLASSASLGGKGQLKFTSGRWSPHHNCTQVATANDTTLRGWDTRTMSQIYCIENAHGQLVRDLDFNPNKQYYLASCGDDCKVKFWDTRNVTEPVKTLEEHSHWVWNVRYNHSHDQLVLTGSSDSRVILSNMVSISSEPFGHLVDDDDISDQEDHRSEEKSKEPLQDNVIATYEEHEDSVYAVDWSSADPWLFASLSYDGRLVINRVPRALKYHILL", - "output": "trans-Golgi network ; endocytic recycling ; positive regulation of endocytic recycling ; positive regulation of retrograde transport, endosome to Golgi ; regulation of insulin secretion" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MNETSNRDHQVTSKEILDVAFEKSKSKFTTPRQTIQDTEELQSYQQTKRKEFEQHINKNRLNLGQWTRYAKWEIENNHDFPRARSILERALDVNIQHVPFWIQYIQLELSHKNINHARNLMERAINTLPRVNKLWFLYVQTEEMLKNYPMVRAVFERWLDWHPDTSAWDAYINFEARYEEKENVRTIFKKYVHEFPNAGTWYKWIKYEMENNRDDVNTVRAVFESAVDTLLSNKSEENDDDEEFATIISSWTSWEVSCGEASRANEIFKLLLDNKTNKLEISDQTKSSIYTAFVEFEKNFGNKDSIEQSVLIKRRIKYEQEIQNDPYDYDSWWKYMTLLQNSSNKSDLENAFKKVTGNVVHDKHKSIKWRRYIMFWIWYAFWEEMTNNNPVSAREIWNNCLKVIPHKSFTFAKVWIGYSEFELRNSEDGLAKARKILGRAIGQTSINKPKIKIFKYYIDLEKKLGDWNRVRLLFQKWLEVSLLTTSSSELVIEKYVEFESSIEEYDRCDSILSSARQLSENPEYSSSFNLQRLLEITVEFYKEEMQYDKIREIYRALLDKDPNAHNWISFALFESSIPSAEQLEEYLQGDNEEFEATVDESQIESTRNIFEEAMTYFKDKDDKESRLVIIEAWRDFEEVNGSDESLSKVTKRLPVIVRKRRTVGSIEEEYIDYIFPDDESKKLPGKMSKFLANAKKWAQQN", - "output": "chromatin ; post-mRNA release spliceosomal complex ; Prp19 complex ; U2-type catalytic step 1 spliceosome ; U2-type catalytic step 2 spliceosome ; U2-type post-mRNA release spliceosomal complex ; U2-type prespliceosome ; chromatin binding ; DNA replication origin binding ; cis assembly of pre-catalytic spliceosome ; DNA replication initiation ; mRNA splicing, via spliceosome ; spliceosomal complex assembly" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MNIFRLTGDLSHLAAIIILLLKIWKSRSCAGISGKSQLLFALVFTTRYLDLFTSFISLYNTSMKLIYIACSYATVYLIYMKFKATYDGNHDTFRVEFLIVPVGGLSFLVNHDFSPLEILWTFSIYLESVAILPQLFMISKTGEAETITTHYLFFLGLYRALYLVNWIWRYYFEGFFDLIAVVAGVVQTVLYCDFFYLYVTKVLKGKKLSLPA", - "output": "cis-Golgi network ; COPI-coated vesicle membrane ; endoplasmic reticulum ; endoplasmic reticulum membrane ; Golgi membrane ; membrane ; ER retention sequence binding ; KDEL sequence binding ; endoplasmic reticulum to Golgi vesicle-mediated transport ; maintenance of protein localization in endoplasmic reticulum ; protein retention in ER lumen ; protein transport ; retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MKSTVTKIAEKTYQLPVSYKDCMRVPGNVYLDELLFENLQEDVFEQIANVACLPGIQKYSLAMPDCHYGYGFCIGGVAAFDEVTGVISPGGVGFDINCGVRLVKTNLTKNDVTPKLKELLSEIFKNVPSGLGSKGKIRITKDEIDSVLEEGVSWAVEEEYGWERDIKHIEEHGKMKEADPTLVSDNAKKRGLPQLGSLGSGNHFLEVQYVDEIFDEEAAKTFGVSPDQVVLMIHTGSRGLGHQICADYLRYMENAAKKYNIKLPDRQLACAPINSEEGQKYFKAMSCGANYAWANRQLITHWIRESFESVFKTSAEDLEMDIIYDVAHNIAKKEQHLVDGVLKNVVVHRKGATRAFGPGHAEIPSDYVNIGQPVIIPGDMGTASYLMHGTEKAMEQTFGSTAHGAGRALSRVKALKLYTGNEVQEALQKKGILVMADSKGVIAEECPEAYKDIENVADICHDSGISLKVAKMKPMGVVKG", - "output": "GTP binding ; metal ion binding ; RNA ligase activity ; tRNA processing" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MTTPALLPLSGRRIPPLNLGPPSFPHHRATLRLSEKFILLLILSAFITLCFGAFFFLPDSSKHKRFDLGLEDVLIPHVDAGKGAKNPGVFLIHGPDEHRHREEEERLRNKIRADHEKALEEAKEKLRKSREEIRAEIQTEKNKVVQEMKIKENKPLPPVPIPNLVGIRGGDPEDNDIREKREKIKEMMKHAWDNYRTYGWGHNELRPIARKGHSPNIFGSSQMGATIVDALDTLYIMGLHDEFLDGQRWIEDNLDFSVNSEVSVFEVNIRFIGGLLAAYYLSGEEIFKIKAVQLAEKLLPAFNTPTGIPWAMVNLKSGVGRNWGWASAGSSILAEFGTLHMEFIHLSYLTGDLTYYKKVMHIRKLLQKMDRPNGLYPNYLNPRTGRWGQYHTSVGGLGDSFYEYLLKAWLMSDKTDHEARKMYDDAIEAIEKHLIKKSRGGLTFIGEWKNGHLEKKMGHLACFAGGMFALGADGSRADKAGHYLELGAEIARTCHESYDRTALKLGPESFKFDGAVEAVAVRQAEKYYILRPEVIETYWYLWRFTHDPRYRQWGWEAALAIEKYCRVNGGFSGVKDVYSSTPTHDDVQQSFFLAETLKYLYLLFSGDDLLPLDHWVFNTEAHPLPVLHLANTTLSGNPAVR", - "output": "endoplasmic reticulum ; extracellular exosome ; Golgi apparatus ; Golgi membrane ; membrane ; calcium ion binding ; mannosyl-oligosaccharide 1,2-alpha-mannosidase activity ; carbohydrate metabolic process ; Golgi apparatus mannose trimming ; lung alveolus development ; N-glycan processing ; protein glycosylation ; respiratory gaseous exchange by respiratory system" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MTATLDVPEQNPDLVLDQSADDYWNHYQLTFALYSVSDRAIPSAYDGLKPGQRRLLYQMHDSKLLPGNKPQKSSKVCSAVTGNLHPHGGASMYGAAALMAADFQRVKVIDGQGAFPRIQGDIPAADRYTEMRLSAPGAALTAELNDHAVPMVPTFDGEWVEPTVLPAQWPVLLCNGAVGIAEGWATKVPAHNPREVMAACRALLKTPNMTDDRLCKLIPGPDWGSGASVVGTAGLREYITTGRGHFTVRGTISVEGKNCIITELPPGVASNTVQDRIRALVESGEMSGVADMSDLTDRRNGLRIVVTAKRGHNAEQIRDQLLALTPLESTFAASLVALDENRVPRWWSVRDLIMAFLQLRDSVVLHRSEYRLEKVTARRHLVAGLMKIHLDIDAAVAVIRGSETVDEARKGLQERFKIDAEQADYVLSLQLRRLTKLDVIELQAEAEKLDAEFAELNDLVTNPESRRKVIDKELVETAKLFKGPEYDRRTVLDFDATPVSRGDEDGSRERKVNTAWRLDDRGVFSDSHGELLTSGLGWAVWSDGRIKFTTGNGLPFKIRDIPVAPDITGLVRSGVLPEGYHLALVTRRGKILRVDPASVNPQGVAGNGVAGVKLAADGDEVIAALPVSCANGEAILSIAEKSWKVTEVADIPVKGRGGAGVAFHPFVKGEDALLAASISKTGYVRGKRAVRPENRAKASIKGSGADVTPAPAE", - "output": "ATP binding ; DNA binding ; DNA negative supercoiling activity ; DNA topological change" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MGRAPCCEKMGLKRGPWTAEEDRILVAHIERHGHSNWRALPRQAGLLRCGKSCRLRWINYLRPDIKRGNFTREEEDAIIHLHDLLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRLEPKPSSGREAAAPKRKATKKAAAVAVAIDVPTTVPVSPEQSLSTTTTSAATTEEYSYSMASSADHNTTDSFTSEEEFQIDDSFWSETLAMTVDSTDSGMEMSGGDPLGAGGASPSSSNDDDMDDFWLKLFIQAGGMQNLPQI", - "output": "nucleus ; DNA binding" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "QRYNPYKYIELFLVVDNRMVTKYNGDLDKIKTRIYELVNILNEIYRPLYIRVALVGIEFWCNKDLINVKSASSVTLASFANWRESVLPNRTSHDNAQLLTAIVFNRGVIGSAYPAGMCDPNRSVGTVQDHSEINLQVAITMAHEIGHNLGMGHDNNSCTCGGYSCIMLPALSDQPSKYFSNCSYIQYRDFIMNQDPQCILNEPSGTDIVSPPVCGNDILEVGEECDCGCPRNCQDPCCNAATCKKYSWVQCESGECCDQCRFKGAGTECRRAMGDDPGGRCTGQSADCPRN", - "output": "extracellular region ; metal ion binding ; metalloendopeptidase activity ; toxin activity ; proteolysis" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MSSESGKPIAKPIRKPGYTNPALKALGIPALRLPSRNWMIFWSVLTVSIGGIAYDKYKQRQILSHATDLVKPLAEESMEVDKVPRKITVFIAPPPNDYLESSLKVWRRYVKPVLYYAGLDYELVQEDRQGIIRTNVANRIRELRKEILASTDGQPVKEPNQTVAKPSGSSTSKISSLLPFNKIIQDPAEEDDSFDPEIGKKFKENFDWRNVIGIFYTMPKPKHIISEDALTKDPILSGGVICLGRGAYKEYIAGIHEGLLGPIEKTEKTGSTEPKMTGVVEANQIESKVSESGATELVDAEKETALEEAKVQDDLKVDEENSSEDSQKFLKPFISSDQYPDLQIASELQTPNGEFIRNPNTNIPLLINQPLLVIPIPNLIGFTTIPRRIHRFYQKRFYVEDVCSSVVNCVRQTRIRPFDIAKDIDLAKDEEKDWPQNWVKQGKEKNSEWTQELVCDPRITKHMFVYEKPPKEEPESDI", - "output": "cytoplasm ; cytosol ; intracellular membrane-bounded organelle ; membrane ; mitochondrial inner membrane ; mitochondrial intermembrane space ; mitochondrion ; TIM22 mitochondrial import inner membrane insertion complex ; D-erythro-sphingosine kinase activity ; lipid kinase activity ; phosphorylation ; protein insertion into mitochondrial inner membrane ; protein transmembrane transport ; sphingosine biosynthetic process" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MVKTWEEFLKQEAKQPYFIELMEAVKDARAKGNVYPSEEDMFSCFRLCPYNQVKVVILGQDPYHGPGQAHGLSFSVQKDVRIPPSLRNIYKELKTDLDIEPADHGYLAKWAEQGVLLMNTSWSVEEGKAGSHKKLGWATFTDHVLEELNNYDKPLVFILWGNHAIKAASGITNPQHLIIKGVHPSPLAASRGFFGSKPFSKTNAFLEEHERKPIDWDLNEQ", - "output": "cytoplasm ; uracil DNA N-glycosylase activity ; base-excision repair, AP site formation via deaminated base removal" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MARYIGPSCKLARREGADLSLKSPSRALDSKCKLEQRPGQHGAVRKSKLSDYASQLREKQKVKRIYGVLERQFRNYYKNASTKKGNTGENLLQLLETRLDNVIYRMGFAVTRPAARQLVSHRSVLVNGKMVNLPSYHVKPGDVVALSQRAQKYLCVQESLTIKDQHGSAFSWIEVDSEKFSGVFKALPDRADLPSDINEALIVELYSK", - "output": "small ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MQTPPVKDGPRINEDIRVPRVLLIDHNGEKQGEMPISAALEAAEEAGLDLVEIVPNANPPVCKILDYGKFKFQEQKKKNEARKRQKIVELKEIKLRPNIDIHDYDVKAKSMHRFFEEGDKVKVTLRFRGREMAHPELGMKLLLKVKADFDEIAKVEYEPRMEGRQMIMILAPR", - "output": "cytoplasm ; translation initiation factor activity" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MSVTKKPDLSDPVLKAKLAKGMGHNTYGEPAWPNDLLYMFPVVILGTFACVIGLSVLDPAAMGEPANPFATPLEILPEWYFYPVFQILRVVPNKLLGVLLMAAVPAGLITVPFIESINKFQNPYRRPIATILFLLGTLVAVWLGIGSTFPIDISLTLGLF", - "output": "chloroplast thylakoid membrane ; mitochondrial respiratory chain complex III ; electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity ; electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity ; mitochondrial electron transport, ubiquinol to cytochrome c ; photosynthetic electron transport chain ; proton transmembrane transport" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MRNLAVFGTASDVGKSVVATALCRIFSNAGLDVAPFKAQNMSNNSGVTPDGLEMGRAQIVQAEAARVVPTADMNPVLLKPNTDTGAQVVLQGKAVANRSARDYFGNTEVWAEAAFESLERLTGRHDLVVIEGAGSCAEMNLYDRDFVNFRTAKEADAPVILVADIDRGGVFAQVAGTLSVIPPEDRARVKGVIINRFRGDSVLFDDGIRILEELSGVPVLGVIPYFRGIHIEAEDAVPLQAVVDPAASPDPGKISIAIVYFPHISNFTDFAVFDLLDDAEVHYLHHPKDLADYDAVILPGSKNVRGDLDWMIFMGWKERLAEYRKRGGIIAGICGGYQMLGISVADPHGLEGEPGETSGLGLLPVHTLLKKEKQLFNAKGCLFDDTIPVEGYEIHMGETRLTGKASPLLQLTARNNRHSSDTDGVISHDEKVFGTYFHGIFDGSAFRGWFLGKLRPDSAVNDTITEKDTEYNRLAEHFLSHLNMGKVYEIIGRGK", - "output": "ABC-type vitamin B12 transporter activity ; catalytic activity ; cobalamin biosynthetic process ; glutamine metabolic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MSKVSGSNGGDSKNTLYCSFCGKSQHEVRKLIAGPTVFICDECVELCMDIIREENKSSMVKSRDGVPTPQDIIKVLDEYVIGQRQAKKILSVAVHNHYKRLAHASKNGEVELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQSADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVKAQDDRRVGEVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALIKQYQRLFEMEDVELTFHEDALREIARKAIVRKTGARGLRSIMEKILLDTMFELPTLEGVREVVISEEVVRGSARPLYIYADRQEEKANASA", - "output": "ATP binding ; ATP hydrolysis activity ; ATP-dependent protein folding chaperone ; protein dimerization activity ; unfolded protein binding ; zinc ion binding" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MATKSTSKPLLLSFLMMSYLISTFHVITVAEGRTLQFTKMATDHSGAGNLMDCWNAGLELKSCTDEIVKFFLSQTGTSEPPVKGGIDKDCCGAIGLVVKDCWSVMFTSLGLTTMEGNNLREYCEFQAEKSELSPSPAPETLALSPVEITYPGLDY", - "output": "cytoplasmic vesicle ; extracellular region ; vesicle ; double fertilization forming a zygote and endosperm ; regulation of double fertilization forming a zygote and endosperm ; regulation of protein localization to cell surface" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MGKIKELQTSLANKIAAGEVVERPSSVVKELLENAIDAGATEISIEVEESGVQSIRVVDNGSGIEAEDLGLVFHRHATSKLDQDEDLFHIRTLGFRGEALASISSVAKVTLKTCTDNANGNEIYVENGEILNHKPAKAKKGTDILVESLFYNTPARLKYIKSLYTELGKITDIVNRMAMSHPDIRIALISDGKTMLSTNGSGRTNEVMAEIYGMKVARDLVHISGDTSDYHIEGFVAKPEHSRSNKHYISIFINGRYIKNFMLNKAILEGYHTLLTIGRFPICYINIEMDPILVDVNVHPTKLEVRLSKEEQLYQLIVSKIQEAFKDRILIPKNNLDYVPKKNKVLHSFEQQKIEFEQRQNTENNQEKTFSSEESNSKPFMEENQNDEIVIKEDSYNPFVTKTSESLIADDESSGYNNTREKDEDYFKKQQEILQEMDQTFDSNDGTTVQNYENKASDDYYDVNDIKGTKSKDPKRRIPYMEIVGQVHGTYIIAQNEFGMYMIDQHAAQERIKYEYFRDKIGEVTNEVQDLLIPLTFHFSKDEQLVIDQYKNELQQVGIMLEHFGGHDYIVSSYPVWFPKDEVEEIIKDMIELILEEKKVDIKKLREDVAIMMSCKKSIKANHYLQKHEMSDLIDQLREAEDPFTCPHGRPIIINFSKYELEKLFKRVM", - "output": "mismatch repair complex ; ATP binding ; ATP hydrolysis activity ; ATP-dependent DNA damage sensor activity ; mismatched DNA binding ; mismatch repair" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MKPYFCRVFVFCFLIRLLTGEINGSADHRMFSFHNGGVQISCKYPETVQQLKMRLFREREVLCELTKTKGSGNAVSIKNPMLCLYHLSNNSVSFFLNNPDSSQGSYYFCSLSIFDPPPFQERNLSGGYLHIYESQLCCQLKLWLPVGCAAFVVVLLFGCILIIWFSKKKYGSSVHDPNSEYMFMAAVNTNKKSRLAGVTS", - "output": "external side of plasma membrane ; plasma membrane ; cell-cell adhesion ; T cell costimulation ; T cell tolerance induction" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MAQQTFTGRKRVRKFFGHIREVAEMPNLIEVQKASYDQFLMVEEPVGGRLDEGLQAVFRSVFPISDFSNTSMLEFVRYEFEPPKYDVDECRQRGMTYAAPLKVTLRLIVFDIDEETGARSVKDIKEQDVYMGDIPLMTMNGTFVVNGTERVIVSQMHRSPGVFFDHDKGKTHSSGKLLFAARVIPYRGSWLDIEFDAKDIVFARIDRRRKLPVTSLMFALGLDGEEILSTFYKKIIYKRTKEGWRVPFDANRFRGYTTTNDVIDADTGKVVLEAGKKLTVRAARQLQEKGLKALRMTDEDIVGNYLAEDLVNPKTGEIYAEAGEEITEKSLKALNEQGYKDLTLLDIDHVNIGPYIRNTLAADKNMTREDALFDIYRVMRPGEPPTLDSAQNMFQSLFFDSERYDLSAVGRVKMNMRLELDAPDTHRTLRKEDILAVIKTLVGLRDGRGEIDDIDHLGNRRVRSVGELMENQYRIGLLRMERAIKERMSSVDIDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQTNPLSEITHKRRLSALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATFARVNKYGFVETPYRRVKDGRVTDEVVYLSAMEEGRYAVAQANVQLDPKGRFVEDLIVCRDGGTRDVVLIPADKVDFMDVSPKQLVSVAAALIPFLENDDANRALMGSNMQRQAVPLVRAEAPFVGTGMEGVVARDSGAAIAARRTGVVDQIDATRIVIRATEDLDPTKSGVDIYRLMKFQRSNQSTCINQRPLVKVGDQVAKGDIIADGPSTDLGELALGRNVLVAFMPWNGYNFEDSILLSERIVKDDVFTSIHIEEFEVMARDTKLGPEEITRDIPNVSEEALKNLDEAGIVYIGAEVRAGDILVGKITPKGESPMTPEEKLLRAIFGEKASDVRDTSLRVPPGVQGTIVEVRVFNRHGVDKDERALAIEREEIERLAKDRDDEQAILDRNVYGRLADLLDNRQGIAGPKGFKKDTKITRAVLEEYPKSQWWMFASPNDKLMAEIEAMRKQYDESKKGLEQRFLDKVEKLQRGDELPPGVMKMVKVFVAVKRKIQPGDKMAGRHGNKGVVSKIVPIEDMPFLEDGTHADIVLNPLGVPSRMNVGQILETHLGWACAGLGKRIGQTIDAYYQKQDLKPMRETLKKIYGDDETIKSLNDAELIELARNLKPGVPIATPVFDGAKEADIEEMLHLAGLDASGQSTVYDGRTGDSFDRKVTVGYIYMLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVAGRTKVYEAIVRGDDTFEAGIPESFNVLVKEMRSLGLNVDLHNSKLAGTPSEAAE", - "output": "DNA-directed RNA polymerase complex ; DNA binding ; DNA-directed 5'-3' RNA polymerase activity ; ribonucleoside binding ; DNA-templated transcription" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MKPDVLLYNSQHLINNITLYQLNHINIASFSFVFFSGLFTSFSPCLISILPICIMYISGEGQKLSQIDKLKNLFFFCLGAISSFTTLGLIATLLAKTYSQLFNGIPVISALVIIYMGFSLLNIVPLSTNNLNTRINNTNQNIKMYLSGVGIGLAISSCSTPIFVTLLIWVTSNHNLFIGLIFILIYSIGYIFPIIIGSLFSSRFLTTASSPFLNNLWAPFSGTILLSAGTFSLFSSILKY", - "output": "chloroplast membrane ; cytochrome complex assembly" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "EVTKPETINYRTLKPEMDGLFCEKIFGPSKDWECHCGKYKRVRHRGIVCERCGVEVTESRVRRHRMGFIKLAAPVSHVWYLKGIPSYVAILLDMPLRDVEQIVYFNCYVVLDPGDHKELKYKQLLTEDEWLEIEDEIYAEESEIENEPVVGIGAEALKQLLEDLNLEEVAEQLREEINGSKGQKRAKLIKRLRVIDNFVATSAR", - "output": "DNA-directed RNA polymerase complex ; DNA binding ; DNA-directed 5'-3' RNA polymerase activity ; metal ion binding ; DNA-templated transcription" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MPMRKRHFYRLLPLASLLLAACTIPVSKGPATSPTSPQWRQHEQQLQQLGQFETRGAFAYLSDKQKVYARFFWQQTSPERYRLLLTNPLGSTELELVVQPGVTQLTDNQGKRYVSDDPQEMIQKLTGMSIPLESLRQWILGLPGDTPNFTLDDKYRLKKLTYQQNGVTWVVDYQEYNTQVTPPLPSRLELNQDGQRIKLKMDSWTIK", - "output": "cell outer membrane ; lipoprotein localization to outer membrane ; protein transport" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MAHYSKVDLDEEFERFMKELSDDSFENSNETPSQPNKDRKKKDTAPWWIAEDGFEDDGLLGTNVSYLKTKKTYQPITDMEEENEKVQFLKSSGTSVLSVDSLEANELVASELHHSTLGLGLDTLEEQEEKEQFFARLEKGLTSSIDYSKLNQELDSDDSAQFRVLHRYQGNVEPAEGGRENESEHKELPETYSDDFEDAEDTDEPLITKDEETRPKENPESGKGSFPNQEEEKTGMLANVVLLDSFDSVEDVDLNNHERPTPKAKALPEMAGGELAETGVSYGQSSGDTEALHQAYHHVAHSLGDTGEPRIEASPGHSVRSSAKDGLQENEESSKNISTTESDLPTVEELMKPIRIDSYGIRGFDLQPVSLQKAVGSKEAESVSSLPLTVNTNTMSQDTRHVSPFPHEQDESVVLHRTAGEGVGSSCPATEEHLDKMYLEILRKKTSVNPSLLPQDNKANQTSRSRLSAREEAPVTSKQVPCKKARSAPPLPRRKPQSGLYASARSSGYSKPSSPLQFFSALEKKTSKDNTKTKNVRPIPTSNQFRKREILSGTKLIKPAALNKPSPHREGSPATPKRPEDPSDDSFVQLQTETLGSYGGNREKELLMLKRAQDAEEKWRGAQALIEQIKMTFSEKEKELENTVESLKRQQERELFKLNQENYILQAKLSSFEETSRKQRWLQFGETSDPLTEEKLKQIQKEIQEQETLLQGYQQENERLYSQVKDLQEQNKKNEERMFKENQNLFSELASLKEQMHKNHFLPQAVENIEPTKNQSFTDLLAELRAAQKEKNHLMEDIKRLKQDKQALEVDLERVKRERDQAKDQIAYTTGEKLYEIKILEETHKQEVSRLQKRLQWYAENQELLDKDAARLREANEETERLKLEIEKLKTESGSPANQQRLRSKERALDAKRIQDLERQVKEMEGILKRRYPNSLPALILAASAAGDSVDRNTVDFMERRIKKLEADLEGKDEEAKKSLRTMEQQFQKMKIQYEQRLEEQEQMLAHRQREAPQNQHNSSSRLKALETELGGIKEAHQITVRKLEAEIDVLKHQNAHLEHKKNDKEDQDLQSIEFQVEQAQARAKLARLNEELAAKGREIQDLTKTVERLQKERRMMLSRQSPRGREEMAAKRLKKEILHPNSGNANAFSETLGAKLYHPHTFTDSHISEVLEENYRLRSELEGLTLEREKLKMESEAAVCQLESSMKRVKDDAAAHIASLKAAHEREIEKLLCQNAVENSSSRVAELNRKIATQEVLLKHFQGQVNELQGKQESLSLSQVREEILQKQITKLLEELKEAKENHTPEMKHFMGLERKIKQMEMRHKQREQELQQIIQQTRQVVETEQNKEVEKWKRLAQLKNRELDKFRTELDSILDVLRELHRQGVVVPVALADEESTAKEF", - "output": "axonemal microtubule ; centriolar satellite ; centriole ; centrosome ; cytosol ; nucleoplasm ; spindle ; cilium assembly" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MRTQRLKKLALVCALGFACITTAQAAERIAFIPKLVGVGFFTSGGKGAVDAGKALGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIVVSAVSPDGLCPALKRAMQRGVKILTWDSDTKPECRSVYINQGTPNQLGSMLVDMAANQVKKEQAKVAFFYSSPTVTDQNQWVNEAKKKIQQEHPGWEIVTTQFGYNDATKSLQTAEGILKAYGDLDAIIAPDANALPAAAQAAENLKRANVAIVGFSTPNVMRPYVERGTVKEFGLWDVVNQGKISVYVANEMLKKGDLNVGDKIDIPNIGVVEVSPNRVQGYDYEAKGNGIVLLPQRVIFTKENISKYDF", - "output": "ATP-binding cassette (ABC) transporter complex ; outer membrane-bounded periplasmic space" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MSAKNNIQDQLLNTARKEKIDLTIYLLNGVPLKGKVVSFDNFTIILENENKQNLVYKHAISTIIPAKPIKLHSEETPKEAGGV", - "output": "RNA binding ; regulation of DNA-templated transcription" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MAKLIAFDQDAREGILRGVDALANAVKVTLGPRGRNVVLDKAFGGPLVTNDGVTIARDIDLEDPFENLGAQLVKSVAVKTNDIAGDGTTTATLLAQALIAEGLRNVAAGANPMELNKGIAAAAEKTLEELKARATEVSDTKEIANVATVSSRDEVVGEIVAAAMEKVGKDGVVTVEESQSIETALEVTEGISFDKGYLSPYFINDNDTQQAVLDNPAVLLVRNKISSLPDFLPLLEKVVESNRPLLIIAEDVEGEPLQTLVVNSIRKTIKVVAVKSPYFGDRRKAFMDDLAIVTKATVVDPEVGINLNEAGEEVFGTARRITVSKDETVIVDGAGSAEEVEARRAQIRREIANTDSTWDREKAEERLAKLSGGIAVIRVGAATETEVNDRKLRVEDAINAARAAAQEGVIAGGGSALVQIAETLKAYAEEFEGDQKVGVRALATALGKPAYWIASNAGLDGSVVVARTAALPNGEGFNAATLEYGNLINDGVIDPVKVTHSAVVNATSVARMVLTTEASVVEKPAEEAADAHAGHHHH", - "output": "cytoplasm ; ATP binding ; ATP-dependent protein folding chaperone ; isomerase activity ; unfolded protein binding ; protein refolding" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MKQFLDFLPLVVFFAFYKLYDIYAATSALIVATAIVLIYSWVRYRKIEKMALITFVLVAVFGGLTLFFHNDEFIKWKVTVIYALFAGALLISQWVMKKPLIQRMLGKELALPQQVWSKLNLAWALFFIACGLANIYIAFWLPQNIWVNFKVFGLTALTLIFTLLSGVYIYRHLPQEDKS", - "output": "plasma membrane" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MMNISNVSIALYLCTLFAFVSSDSPEAMRDLVTNFPGQPKVSFRHYAGYVTVNIISGRALFYWFFEAMTHPNVKPLVLWLNGGPGCSSVGYGATQEIGPFLVDNKGNSLKFNPYAWNKEANILFLESPAGVGFSYSNTSSDYRKLGDDFTARDSYTFLQKWFLRFPAYKEKDFFIAGESYAGKYVPELAEVIYDKNKDNENLSLHINLKGILLGNPLTSYAEDWTGWVDYAWNHAVVSDETYRVIKQSCNFSSDTTWDVKDCKEGVDEILKQYKEIDQFSLYTPICMHHSSKVDSYANYKTTIPRLFDGFDPCLDDYAKVFYNRADVQKALHATDGVHLKNWTICNDDILNHWNWTDSKRSVLPIYKKLIAGGFRVWVYSGDTDGRVPVLSTRYCINKLELPIKTAWRPWYHETQVSGWFQEYEGLTFATFRGAGHDVPSFKPSESLAFFSAFLNGVPPPLSR", - "output": "extracellular region ; serine-type carboxypeptidase activity ; proteolysis" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MAKSSKRRPAPEKPVKTRKCVFCAKKDQAIDYKDTALLRTYISERGKIRARRVTGNCVQHQRDIALAVKNAREVALLPFTSSVR", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MNQKILEQLEFQKVKEQFQPYLQTAQGIQELRLLEPSNHYDKISDYFKEIAEMATIFVENHHFSIGNLRDVSESMRRLELEADLNIQELLDIKKLLLVSGEISRFYQDLENVDLQVLKRIFEKIEVFPQLQGSLQAVNDAAFIENFASPELDRLRRQIAENERYSRQLLQDILKKNADYLSESLIASRNGKSVLPVKNTFRHRVSGVVHDISASGNTVYIEPRALVQVNEEMTQLLADERHEIARILKELSQLLRPHSRALANNAWLLGHLDFVRAKYHYLVNNKATIPKISKDKNIQLLNVRHPLLKNPVANDLHFADDLAVIVITGPNTGGKTIMLKTLGLAQLMGQSGLPILADEGSKIAVFDAIYADIGDEQSIEQSLSTFSSHMTHIVDILEESNSNSLVLFDELGAGTDPQEGASLAMAILEQLRLTNIKTMATTHYPELKAYGIESDYVENASMEFDSQSLKPTYRFMQGVPGRSNAFEIARRLGLAETIVKEAEQMTDTDSDVNRIIEELERQTLSSRRRLDHIREVEQENIKFNRAVKKLYNEFSLAKDKEIEKASQEAQAIVELALTESEEILSKLHEKAELKPHEIIEAKSKLKSLVPQRDLSKNKVLKKAKKLREPRIGDDIIVSAYGQRGTLIGQVKGNKWEAQVGLIKMTLKEDEFQLVKVEAEAQKPKKQSINMVKKANQNGPRARLDLRGKRYEEAMQELDAFIDQALVNNMSQVDIIHGIGTGVIREAVTKYLRRHKHVKSFAYAPQNAGGSGCTIATLG", - "output": "ATP binding ; ATP hydrolysis activity ; ATP-dependent DNA damage sensor activity ; endonuclease activity ; mismatched DNA binding ; mismatch repair ; negative regulation of DNA recombination" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MNTVRVTFLLVFVLAVSLGQADKDENRMEMQEKTEQGESYLDFAENLLLQKLEELEAKLLEEDSEESRNSRQKRCIGEGVPCDENDPRCCSGLVCLKPTLHGIWYKSYYCYKK", - "output": "extracellular region ; sodium channel inhibitor activity ; toxin activity" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MTATASHTRARPLGASEIEHATRIAEPDFDLLDALYRTDDPDDQARLLARVVLSAFDNYYAVSRRIPALAQAAFEARDWPVTVRLSKIRIGLYTACIDQLVPLLKAGLPELTTDEQLWPTAEAELLAAIEGRYEADFAFAFWQSLRRKLVSDEWRPVSYDAGSTARRTTSPAAVLKTTTTTLPITAEVIAGILGDAGFRVPWRDRDGDAALAAQAIETALEPLSPRPGEPVKIEIADAGFFRNRGACLVGRIQLRDRGDMPMRNLPLLIALLNEKDGLVVDAVLTDSDELQYAFSSTLANYHATNPRYHELARLLYELMPKRPLGTQYSCIGFHHLGKVAVMSEILAEHRKTKERLATAPGFKGTVAIAFTMPSSAYVLKIIRDHPTDDYKFDYFDGLDEVLRKYNLVHEIDRAGSMLDNIIYSNVKLDRAMFAPELLDELLEAGIGTVTLDRGALVFRHLIVQIKLTPLPLYLANASAAESRAAVINLGDCIKNNAAADIFNKDLDGRNYGVSRIRKVYLFDYDAVEPLTSVTVSRDGAAPGEFDNGMVFRPQEMLEGLRIDDPGLRRAFRDAHPELMQADYWEGMQRALRDGKVPKVMNYPASRRLQR", - "output": "cytoplasm ; kinase activity ; ATP binding ; phosphoprotein phosphatase activity ; protein serine/threonine kinase activity ; glucose metabolic process ; glyoxylate cycle ; phosphorylation ; tricarboxylic acid cycle" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MAGAASPCANGCGPSAPSDAEVVHLCRSLEVGTVMTLFYSKKSQRPERKTFQVKLETRQITWSRGADKIEGAIDIREIKEIRPGKTSRDFDRYQEDPAFRPDQSHCFVILYGMEFRLKTLSLQATSEDEVNMWIRGLTWLMEDTLQAATPLQIERWLRKQFYSVDRNREDRISAKDLKNMLSQVNYRVPNMRFLRERLTDLEQRTSDITYGQFAQLYRSLMYSAQKTMDLPFLEASALRAGERPELCRVSLPEFQQFLLEYQGELWAVDRLQVQEFMLSFLRDPLREIEEPYFFLDEFVTFLFSKENSIWNSQLDEVCPDTMNNPLSHYWISSSHNTYLTGDQFSSESSLEAYARCLRMGCRCIELDCWDGPDGMPVIYHGHTLTTKIKFSDVLHTIKEHAFVASEYPVILSIEDHCSIAQQRNMAQYFKKVLGDTLLTKPVDIAADGLPSPNQLKRKILIKHKKLAEGSAYEEVPTSVMYSENDISNSIKNGILYLEDPVNHEWYPHYFVLTSSKIYYSEETSSDQGNEDEEEPKEASGSTELHSNEKWFHGKLGAGRDGRHIAERLLTEYCIETGAPDGSFLVRESETFVGDYTLSFWRNGKVQHCRIHSRQDAGTPKFFLTDNLVFDSLYDLITHYQQVPLRCNEFEMRLSEPVPQTNAHESKEWYHASLTRAQAEHMLMRVPRDGAFLVRKRNEPNSYAISFRAEGKIKHCRVQQEGQTVMLGNSEFDSLVDLISYYEKHPLYRKMKLRYPINEEALEKIGTAEPDYGALYEGRNPGFYVEANPMPTFKCAVKALFDYKAQREDELTFTKSAIIQNVEKQEGGWWRGDYGGKKQLWFPSNYVEEMVSPAALEPEREHLDENSPLGDLLRGVLDVPACQIAVRPEGKNNRLFVFSISMASVAHWSLDVAADSQEELQDWVKKIREVAQTADARLTEGKMMERRKKIALELSELVVYCRPVPFDEEKIGTERACYRDMSSFPETKAEKYVNKAKGKKFLQYNRLQLSRIYPKGQRLDSSNYDPLPMWICGSQLVALNFQTPDKPMQMNQALFLAGGHCGYVLQPSVMRDEAFDPFDKSSLRGLEPCAICIEVLGARHLPKNGRGIVCPFVEIEVAGAEYDSIKQKTEFVVDNGLNPVWPAKPFHFQISNPEFAFLRFVVYEEDMFSDQNFLAQATFPVKGLKTGYRAVPLKNNYSEGLELASLLVKIDVFPAKQENGDLSPFGGASLRERSCDASGPLFHGRAREGSFEARYQQPFEDFRISQEHLADHFDGRDRRTPRRTRVNGDNRL", - "output": "COP9 signalosome ; cytoplasm ; lamellipodium ; plasma membrane ; ruffle ; calcium ion binding ; calcium-dependent phospholipase C activity ; phosphatidylinositol phospholipase C activity ; cellular response to epidermal growth factor stimulus ; cellular response to vascular endothelial growth factor stimulus ; epidermal growth factor receptor signaling pathway ; in utero embryonic development ; phosphatidylinositol metabolic process ; phosphatidylinositol-mediated signaling ; phospholipid catabolic process ; positive regulation of epithelial cell migration ; release of sequestered calcium ion into cytosol" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MNIKTIEGNLSAKDSKFAIVTSRFNDFIGGRLVEGALDCIVRHDGSEENIAIYKCPGAFEVPMVAKKLAQSGKWDAVIAIGVLIRGATAHFDYIAAEATKGIAQASLECGVPISFGVLTTDTIEQAIERAGTKAGNKGWDAASAAIEMVNLYKQM", - "output": "riboflavin synthase complex ; 6,7-dimethyl-8-ribityllumazine synthase activity ; riboflavin biosynthetic process" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MCFWTNLSVWMILLSHSLSLVSSTETGKTLTQNNSRAGSQGLLEVLRVLSAGDHWSLNHPQSLIKILLERTGCPQRTDWTQGDCKLCLEADALLLTAGGNLEDELREEVVQRVSLLLLYYIIHQEEICSSKLNMSNREYEFYLHSLLGLRQDEDSYFLSEKETDDILAFTRKYFGTSSSQCMETKILQRESGIQGSNGADEKTLPQLAATIIALSLQGVCLGRKALPSPDDFTEYIFSFLNSTNTLHLSEIEQLLNMLTTRRTCAKEDKYLHQYQRKQNTEEHSLRDPKTSTAMDKESDDHSPSWDQACFSARQLVEIFLQNHSSLSISKEDFKQLSPGIIQQLLSCSCQMPKDQQAKPPPTTLEKYGYSTVAVTLLTLGSMLGTALVLFHSCEENYSLILQLFVGLAVGTLSGDALLHLIPQVLGLHKQEAEFGHFHESQSPIWKLLGLLGGIHGFFLIEKCFILLVSPNTKGLPLVNEHVGHTHHLGLNPELNDQSSGGKSISTIQLKGPEDSQTTVLPIGNVPASNRNGKTISLLAIMILVGDSLHNFADGLVIGTAFSSSLESGVTTTIAILCHEIPHEMGDFAVLLSSGLSVRTAILMNFLSALTAFAGLYIGLSVSADPRVQDWILTVTAGMFLYLSLVGMLPEMTHVQTQRPWMTFLLQNVGLVLGWFSLLLLAVYEQNIKI", - "output": "perinuclear region of cytoplasm ; plasma membrane ; monoatomic cation:bicarbonate symporter activity ; zinc ion transmembrane transporter activity ; intracellular monoatomic cation homeostasis ; neural tube formation ; neuron projection extension ; positive regulation of sprouting angiogenesis ; regulation of microtubule polymerization ; regulation of neuron projection development ; response to decreased oxygen levels ; signal transduction ; zinc ion import across plasma membrane" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MAEDDLCSLFFKLKVEDVTSSDELARHMKNASNERKPLIEPGENQSMDIDEEGGSVGHGLLYLYVDCPTMMLCFYGGSLPYNWMQGALLTNLPPYQHDVTLDEVNRGLRQASGFFGYADPMRSAYFAAFSFPGRVIKLNEQMELTSTKGKCLTFDLYASTQLRFEPGELVRHGECKFAIG", - "output": "beta-glucosidase activity ; carbohydrate metabolic process ; cytokinin biosynthetic process" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MIKGTGHMIVNIANDRGMSIDSIRKTIKESVLIAYKKYFGSNENAFIKFDDDTGDLSVYAKKKIVKEVKDSLLEILEKDISKENIVEGDYAYIEINPKVFDRLSIQVAKQRTKNDLQGIEDNEILSEFKSKLNKVVIGYVQQNRNGDLYVNLGNTDGIIPKKYQSPREVYNLNDKIRVLVYNVKKGKNGIEVILSRTHPKFIEELLALEIPEIEEGIIKIHKIVRDPGYRIKVAVYSEKEEIDPVGPCIGQKGVRIQSIIKELEGEKIDIIPYSKDIKEFIKDSLTPSKIEHVYILDEDLHKALVVVSDDQLSLAIGKMGQNVRLANRLLDWAIDVKTSSQFAEMKANSEFKQETLEMFDKVMQDVVEEEQFEEISKISDLKLLDPSVISNLSKEGFDDINNFLQADEGVLFNLGVSYEKQEEINKILKEGMIIIANDNDESMEKVEEDEELLCPECGVVINENMTSCPGCKIGLSFEFEEE", - "output": "cytosol ; DNA-binding transcription factor activity ; RNA binding ; DNA-templated transcription termination ; transcription antitermination" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MSDIIRLLPDNIANQIAAGEVVQRPASVVKELLENSVDAGSTNIQLIVKDAGKQLIQVIDNGKGMSDGDARLCFERHATSKIRSADDLFAIRTFGFRGEAMASIASVAQVEMKTKLPGNELGTLIRIEGSAILVHEQTAHPQGTSISVKNLFYNVPARRNFLKSNSVEMRHIMDEFVRVALAHPEVAFSFYHNDLELFNVPEETLSKRAVSLLGGSYREQLIPCKEETDFVSISGYIGKPESARKTRGDQYFFVNNRYIRSNYLHHAVMHAFEELIPTDAFPFYLLFIEIDPAHIDVNVHPTKTEIKFDDEKTVYAIIKACVKRSLGTHNIMPSLDFDFNVNVSGFTGMGLSDSSGRESNTNFTPKSFSTSDSIQRSNQSNWERMYSGLENNREEVYQESIKMVSAINGTEDLKQLSKEQLYTENTSTFQLHQKYIVTQVKSGVLLVDQQAAHERILFEKYIGMLQNRFGSSQQFLFPQTLELSAADFAMVVEMEEDIRKLGFVFNVFSNTTIVVNGVPSDVKSGNEKNLFEGLIEQFKQNRTDLKIDRQENLARSLAKRSAIRAGNKLSLMEMNSIIDQLFACKSPNYAPDGNLTVVMLDMDKIGRLFM", - "output": "mismatch repair complex ; ATP binding ; ATP hydrolysis activity ; ATP-dependent DNA damage sensor activity ; mismatched DNA binding ; mismatch repair" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MALHDENVVWHSHPVTPQQREQHHGHRGVVLWFTGLSGSGKSTVAGALEEALHKLGVSTYLLDGDNVRHGLCSDLGFSDADRKENIRRVGEVANLMVEAGLVVLTAFISPHRAERQMVRERVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFTGIDSVYEAPESAEIHLNGEQLVTNLVQQLLDLLRQNDIIRS", - "output": "adenylylsulfate kinase activity ; ATP binding ; hydrogen sulfide biosynthetic process ; phosphorylation ; sulfate assimilation" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MPAQDVLTRKTGVIVGDDVKALFDYAKEHKFAIPAINVTSSSTVVAALEAARDNKSPIILQTSNGGAAYFAGKGVSNEGQNASIRGSIAAAHYIRSIAPAYGIPVVLHTDHCAKKLLPWFDGMLKADEEYFAKHGEPLFSSHMLDLSEETDEENIGLCVKYFTRMAKIHQWLEMEIGITGGEEDGVNNEGTSNDKLYTTPETVFSVHEALSKISPNFSIASAFGNVHGVYKIAAALKPELLGTFQDYAAKQLNKKAEDKPLYLVFHGGSGSSTKDFHTAIDFGVVKVNLDTDCQFAYLSGIRDYVLNKKDYLMTPVGNPTGEDSPNKKYYDPRVWVREGEKTMSKRITQALEIFRTKGALE", - "output": "cellular anatomical entity ; fructose-bisphosphate aldolase activity ; zinc ion binding ; glycolytic process" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MLKPLGNRVIIERKEQEQTTKSGIVLTDSAKEKSNEGIVVAVGTGRVLDNGEKVAPEVKEGDRVVFQEYAGSEVKRGDKTYLILNVEDLLAIIED", - "output": "cytoplasm ; ATP binding ; protein folding chaperone" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MALSVEEKAQIVAEYQQAAGDTGSPEVQVALLTANINKLQGHFKANDKDHHSRRGLIRMVNQRRKLLDYLKGKDTTRYSALIGRLGLRR", - "output": "cytoplasm ; ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MSCRSEHIWIELIVGSRKISNFCWAFILFLGSLGFVLVGSSSYLGKNLISLVPSQQILFFPQGIVMSFYGIAGLFISSYLWCTISWNVGSGYDRFDRKEGIVCIFRWGFPGKNRRIFLRFRMKDIQSIRIEVKEGISARRVLYMEIKGQGAVPLTRTDENLTPREIEQKAAELAYFLRVPIEVF", - "output": "chloroplast thylakoid membrane ; photosystem I ; photosynthesis" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MEAKDHIERRPDRVSIRRLKLVNFRNYAELSLPLGPGHVVLTGENGSGKTNLIEAISFLSPGRGLRRAAYDDVARANAEGGFAIHAALDCMIYGDAEIGTGTAGGGEGGRKVRINGIAASADDLLDYARILWVVPSMDGLFTGGASDRRRFLDRMVLAIDTAHGKRVLDYEKAMRSRNRLLNDGSNDDQWLDAIENQMAELGTAIAAARAQAMRLIAAMIERLPAEGPFPKADCFLEGALESRIGVEAALDLEEDFRRTLRDGRARDRAAGRTLDGPHRTDLIVQHRPKSMPAALCSTGEQKALLIGLILAHARLTAELSGMAPILLLDEIAAHLDMGRRAALFGILDELGGQAFMTGTDRALFDALAGDAQFFNVSAGQLTGI", - "output": "cytoplasm ; ATP binding ; single-stranded DNA binding ; DNA repair ; DNA replication ; SOS response" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MPMFVVNTNVPRASVPDGLLSELTQQLAQATGKPAQYIAVHVVPDQLMTFGGSSEPCALCSLHSIGKIGGAQNRSYSKLLCGLLTERLRISPDRIYINFCDMNAANVGWNGSTFA", - "output": "cell surface ; cytosol ; extracellular space ; nucleoplasm ; plasma membrane ; chemoattractant activity ; cytokine activity ; cytokine receptor binding ; dopachrome isomerase activity ; identical protein binding ; phenylpyruvate tautomerase activity ; protease binding ; cell surface receptor signaling pathway ; cellular senescence ; DNA damage response, signal transduction by p53 class mediator ; inflammatory response ; innate immune response ; negative regulation of cellular senescence ; negative regulation of DNA damage response, signal transduction by p53 class mediator ; negative regulation of gene expression ; negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator ; negative regulation of macrophage chemotaxis ; negative regulation of mature B cell apoptotic process ; negative regulation of myeloid cell apoptotic process ; negative regulation of protein metabolic process ; positive regulation of arachidonic acid secretion ; positive regulation of B cell proliferation ; positive regulation of chemokine (C-X-C motif) ligand 2 production ; positive regulation of ERK1 and ERK2 cascade ; positive regulation of fibroblast proliferation ; positive regulation of lipopolysaccharide-mediated signaling pathway ; positive regulation of MAP kinase activity ; positive regulation of myeloid leukocyte cytokine production involved in immune response ; positive regulation of peptidyl-serine phosphorylation ; positive regulation of peptidyl-tyrosine phosphorylation ; positive regulation of prostaglandin secretion involved in immune response ; positive regulation of protein kinase A signaling ; positive regulation of tumor necrosis factor production ; prostaglandin biosynthetic process ; protein homotrimerization" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MSVLLFGVSHRSAPVVVLEQLSIDESDQVKIIDRVLASPLVTEAMVLSTCNRVEVYAVVDAFHGGLSVIGQVLAEHSGMSMGELTKYAYVRYSEAAVEHLFAVASGLDSAVIGEQQVLGQVRRAYAVAESNRTVGRVLHELAQRALSVGKRVHSETAIDAAGASVVSVALGMAERKLGSLAGTTAVVIGAGAMGALSAVHLTRAGVGHIQVLNRSLSRAQRLARRIRESGVPAEALALDRLANVLADADVVVSCTGAVRPVVSLADVHHALAAARRDEATRPLVICDLGMPRDVDPAVARLPCVWVVDVDSVQHEPSAHAAAADVEAARHIVAAEVASYLVGQRMAEVTPTVTALRQRAAEVVEAELLRLDNRLPGLQSVQREEVARTVRRVVDKLLHAPTVRIKQLASAPGGDSYAEALRELFELDQTAVDAVATAGELPVVPSGFDAESRRGGGDMQSSPKRSPSN", - "output": "glutamyl-tRNA reductase activity ; NADP binding ; protoporphyrinogen IX biosynthetic process" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MTEALVVDDSHFMRTVISDILEDGGVDVVGTAENGARALDAVTDVQPDVITMDVEMPEMDGIEATAEIMREQPTPILMVSALTTEDADATLEAMEKGAIDTFAKPGGTISTELSGHSEELVAAVERVASADPTAGHDVEMEPASPPDATTSEYADNPTLLIGASTGGPNVVESILASLPAEADFRVLIVQHMPDQFTSRFADRLDAASQYDITEAEDGSRIGGGEGLVARGDYHMRVSGYSNGRLRVRLDQSERLHSVRPAIDVTFKSAAERVTDPLVSVVLTGMGSDGADGVRAVKDAGGATLAQNEATSAVFGIPERAIETGCVDDVLPVDQLTEAIADSIRRTT", - "output": "cytoplasm ; phosphorelay response regulator activity ; protein-glutamate methylesterase activity ; protein-glutamine glutaminase activity ; chemotaxis ; protein deamination ; protein demethylation" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MLERIKDSFTESIQTKIDAAEALPESIAKAAEMMVHCLLGGNKILACGNGGSAGDAQHFSAELLNRYEIERPPLPAIALSTDTSTITAIANDYSYDEIFSKQIFALGQPGDILLAISTSGNSGNVIKAMEAALSRDMTIVALTGKDGGAMAGLLSVGDVEIRVPSNVTARIQEVHLLVIHCLCDNIDRTLFPQDEQQ", - "output": "cytoplasm ; carbohydrate derivative binding ; D-sedoheptulose 7-phosphate isomerase activity ; zinc ion binding ; carbohydrate metabolic process ; D-glycero-D-manno-heptose 7-phosphate biosynthetic process" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MGNGMTKVLPGLYLGNFIDAKDPDQLGRNKITHIISIHESPQPLLQDITYLRISVSDTPEVPIKKHFKECVHFIHSCRLNGGNCLVHCFAGISRSTTIVIAYVMTVTGLGWQEVLEAIKASRPIANPNPGFRQQLEEFGWANSQKLRRQLEERFGEIPFRDEEDLRALLPLCRRCRQGSATSAASATTASSAAEGTLQRLVPRSPRDSHQPLPLLARVKQTFFCLPRCLSRKGGK", - "output": "cytosol ; plasma membrane ; myosin phosphatase activity ; phosphatase activity ; protein tyrosine phosphatase activity ; protein tyrosine/serine/threonine phosphatase activity ; dephosphorylation ; negative regulation of transcription by RNA polymerase II ; positive regulation of ERK1 and ERK2 cascade ; protein dephosphorylation ; regulation of oligodendrocyte differentiation ; signal transduction" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MQTHVLFEHPLNEKMRTWLRIEFLIQQMKALLPVSDHASALHFFRNVGDLLDVFERGDTRTELLKELERQQRKLQSWAEVPGVDNERIESLRHELKARSSMLMAAPRLGQTLREDRLIALVRQRLSIPGGCCSFDLPLLHVWLCSPQEERDVQVNSWLATLQPLTYTLDMILDLIRQSAPFRKQTSLNGFYQDNGDDADLLRLQLPLQEALYPQISGHKSRFAIRFMPLDSEHGRVPERFDFELACC", - "output": "cytoplasm ; division septum assembly ; FtsZ-dependent cytokinesis" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MSGGDGRGHNTGAHSTSGNINGGPTGLGVGGGASDGSGWSSENNPWGGGSGSGIHWGGGSGHGNGGGNGNSGGGSGTGGNLSAVAAPVAFGFPALSTPGAGGLAVSISAGALSAAIADIMAALKGPFKFGLWGVALYGVLPSQIAKDDPNMMSKIVTSLPADDITESPVSSLPLDKATVNVNVRVVDDVKDERQNISVVSGVPMSVPVVDAKPTERPGVFTASIPGAPVLNISVNNSTPAVQTLSPGVTNNTDKDVRPAGFTQGGNTRDAVIRFPKDSGHNAVYVSVSDVLSPDQVKQRQDEENRRQQEWDATHPVEAAERNYERARAELNQANEDVARNQERQAKAVQVYNSRKSELDAANKTLADAIAEIKQFNRFAHDPMAGGHRMWQMAGLKAQRAQTDVNNKQAAFDAAAKEKSDADAALSSAMESRKKKEDKKRSAENNLNDEKNKPRKGFKDYGHDYHPAPKTENIKGLGDLKPGIPKTPKQNGGGKRKRWTGDKGRKIYEWDSQHGELEGYRASDGQHLGSFDPKTGNQLKGPDPKRNIKKYL", - "output": "extrachromosomal circular DNA ; endonuclease activity ; ribosome binding ; RNA binding ; transmembrane transporter binding ; defense response to bacterium ; killing of cells of another organism ; negative regulation of ion transmembrane transporter activity" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MQIINDPAEMQKIAEKLRLQHQYIGVVMTMGALHEGHLSLVKLAKAHAGTVIMTIFVNPTQFGPNEDFYRYPRPFEQDAALARSAGVDYLFAPSTEAMYPDGYSTSIDPGPIATRFEGASRPGHFGGMVTVVVKLLGITRPHLAVFGEKDAQQLAIIRRVVTDLNIGTTILGAPIVRESDGLATSSRNIYLSSNERQQATVLYRAIRYAKMEIDKDRTDLEAIAGEAEALVRSEPDAEPDYLCFVDDATFEPVTQAVTGKAYRLIMAVRIGSTRLIDNWRFDYQ", - "output": "cytoplasm ; ATP binding ; pantoate-beta-alanine ligase activity ; pantothenate biosynthetic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MSGTAEESDKAEAVSVPETVSGSVESQDKEHNSTSSSSDSTDVVGGKKRTIDEVDGSSENNSASVDQLKDAPTDSKPKTEATEDSPIRGNQGNNQENSQENKDDEDDEDDNDDDDNDDDDDEDEDVESYRKKQRRERNRFLDIEAEVSEDEDDEEDEEDSELVREGFITRGDEEDEEDRGGRVDDRLHRELDQNLQKTADEDMHKIAEDFKKRYGRDSSKDYRVQTQGGYVPQRFMLPSVDTAIIWSVRCRPGKEKELVRKLLNKKFNLDKSMGSKKLKILSIFQRDNYTGRIYIEAPKQSVIEKFVNGVPDVYSNQKLLIPVQELPLLLKPTKSDEVRLDVGSYVRIKRGIYKNDLAVIDQISQNNLEALLKIVPRLDYGKNDEIDPDTNQRKAKRATFASRPPPQLFNPTMALRLDQANLFKRDDRHFTYRKEDYVDGYLFKSFKIQYLDTKNIQPTVEELSRFGSKEGDVDLAAIAQTMKKAQASKAMFQPGDRVEVLTGEQRGSRGVVTRSSKDVISVKLSGFSDKSLEFPIASLRKIFELGDHVTVIAGEHEGNAGLVLLVQNGQVTFVSDQTRENLTISANNLSKSMDSTPTSSEYALHDIVELSAKNVACVIQAGHDIFKIIDDSGKVATVTKGSILAKINVARAKVAAVDGNGREIKIGDVVREKIGSRREGQVLYVQNQHIFIRSKTITENAGVFVVNPMNVEAVASKENLMSSALDLSKINPNIASKMGPPQTTQQTRLVGRDVALNKTVRIRSAGYKGQLGIVKDVNGDKATIELHSKNKHITIDKRKLTYFSHEGGEGITYDELVSRRGRTPHTRLGPSYVSAPRHMAAGGAVATNTPQQLPGGMTPGWNAFDGGKTPAVGQNGGTSSWGGASTWGGQGPGGASAWGGAAGNTSTWGGQGATSTWGGASTWGNKSSYGGASSWAASGESGAASAWGGGNKSSYGGTSTWGGNQGGVSAWGGSGNKSQRSKNTGGSSTWGNNQSQHNSGERSAWGNASQHNNSGNRSAWGNQDARGGGSTWGGNN", - "output": "nucleus ; ribosome ; structural constituent of ribosome ; mRNA processing ; regulation of DNA-templated transcription elongation ; regulation of transcription by RNA polymerase II ; transcription elongation-coupled chromatin remodeling ; translation" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MKFFALFIYRPVATILLSVAITLCGILGFRMLPVAPLPQVDFPVIMVSASLPGASPETMASSVATPLERSLGRIAGVSEMTSSSSLGSTRIILQFDFDRDINGAARDVQAAINAAQSLLPSGMPSRPTYRKANPSDAPIMILTLTSDTYSQGELYDFASTQLAPTISQIDGVGDVDVGGSSLPAVRVGLNPQALFNQGVSLDDVRTAISNANVRKPQGALEDGTHRWQIQTNDELKTAAEYQPLIIHYNNGGAVRLGDVATVTDSVQDVRNAGMTNAKPAILLMIRKLPEANIIQTVDSIRAKLPELQETIPAAIDLQIAQDRSPTIRASLEEVEQTLIISVALVILVVFLFLRSGRATIIPAVAVPVSLIGTFAAMYLCGFSLNNLSLMALTIATGFVVDDAIVVLENIARHLEAGMKPLQAALQGTREVGFTVLSMSLSLVAVFLPLLLMGGLPGRLLREFAVTLSVAIGISLLVSLTLTPMMCGWMLKASKPREQKRLRGFGRMLVALQQGYGKSLKWVLNHTRLVGMVLLGTIALNIWLYISIPKTFFPEQDTGVLMGGIQADQSISFQAMRGKLQDFMKIIRDDPAVDNVTGFTGGSRVNSGMMFITLKPRDERSETAQQIIDRLRVKLAKEPGANLFLMAVQDIRVGGRQSNASYQYTLLSDDLAALREWEPKIRKKLATLPELADVNSDQQDNGAEMNLVYDRDTMARLGIDVQAANSLLNNAFGQRQISTIYQPMNQYKVVMEVDPRYTQDISALEKMFVINNEGKAIPLSYFAKWQPANAPLSVNHQGLSAASTISFNLPTGKSLSDASAAIDRAMTQLGVPSTVRGSFAGTAQVFQETMNSQVILIIAAIATVYIVLGILYESYVHPLTILSTLPSAGVGALLALELFNAPFSLIALIGIMLLIGIVKKNAIMMVDFALEAQRHGNLTPQEAIFQACLLRFRPIMMTTLAALFGALPLVLSGGDGSELRQPLGITIVGGLVMSQLLTLYTTPVVYLFFDRLRLRFSRKSKQTVTE", - "output": "plasma membrane ; transmembrane transporter activity" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MKKTAIAIAVALAGFATVAQAAPKDNTWYAGAKLGWSQYHDTGFIHNDGPTHENQLGAGAFGGYQVNPYVGFEMGYDWLGRMPYKGDNINGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVWRADTKSNVPGGPSTKDHDTGVSPVFAGGIEYAITPEIATRLEYQWTNNIGDANTIGTRPDNGLLSVGVSYRFGQQEAAPVVAPAPAPAPEVQTKHFTLKSDVLFNFNKSTLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRIGSDAYNQGLSEKRAQSVVDYLISKGIPSDKISARGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIEVKGVKDVVTQPQA", - "output": "cell outer membrane ; pore complex ; porin activity ; monoatomic ion transmembrane transport" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MSKLFWAMLAFISRLPVPSRWSQGLDFEQYSRGIVMFPFIGLILGGVSGLIFILLQSWCGIPLAALFCILALALLTGGFHLDGLADTCDGIFSARRRERMLEIMRDSRLGTHGGLALIFVLLAKILVVSELALRGTPMLAALAAACAAGRGSAVLLMYHHRYARDEGLGNVFIGKVSGRQTCITLGLAVIVATVLLPGMQGLAAMVVTLAAIFILGQLLKRTLGGQTGDTLGAAIELGELIFLLALL", - "output": "plasma membrane ; adenosylcobinamide-GDP ribazoletransferase activity ; cobalamin 5'-phosphate synthase activity ; cobalamin biosynthetic process" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MTGPTKISILGQESIVADFGLWRNYVAKDLISGCPSTTYVLITDTNIGSIYTPGFQKSFEEAAASVSPSPRLLIYNAPPGEVSKSRQTKADIEDWMLSQSPPCGRDTVVIALGGGVIGDLTGFVAATYMRGVRFVQVPTTLLAMVDSSIGGKTAIDTPLGKNLIGAIWQPSRIYIDLEFLETLPVREFINGMAEVIKTAAISSEEEFTALEDNAETILSAVRREVKPGQRRFEGIEEILKARILASARHKAFVVSADEREGGLRNLLNWGHSIGHAIEAILTPQILHGECVAIGMVKEAELARHLGILKGVAVARIVKCIAAYGLPTSLKDSRIRKLTAGKHCSVDQILFNMALDKKNDGPKKKIVLLSAIGRTYEPRASVVPNEDIGVVLAPSIEVHPGVSTTSEVVCAPPGSKSISNRALVLAALGSGTVRIKNLLHSDDTEVMLNALERLGAATFSWEEEGEVLVVNGKGGALQAHPSPLYLGNAGTASRFLTTVATLATASSVDSSVLTGNNRMKQRPIGDLVDALTANGAQIEYVENKGSLPLKIAASGGFTGGQINLAAKVSSQYVSSLLMCAPYAKEPVTLKLVGGKPISQPYIDMTTAMMRSFGIDVKKSTTEEHTYHIPQGRYINPAEYVVESDASSATYPLAIAAVTGTTCTIPNIGSKSLQGDARFAVDVLRPMGCTVEQTDTSTTVTGPADGVLRPLPNVDMEPMTDAFLGASVLAAIARGKDSNHTTRIYGIANQRVKECNRIKAMHDELAKFGVVCREHDDGLEIDGIDRSTLRQPAGGVFCYDDHRVAFSFSVLSLIAPKPTLILEKECVGKTWPGWWDTLRQKFAVKLEGKELKEAESPVLTRAEKASASVFIIGMRGAGKTTSGHWVASTLKRPFIDLDDELERIEGMTIPDIIKQRGWQGFRDAELNLLQRTMKERPTGHVFACGGGVVEIPEARKLLIDWHKTKGNVLLIMRDIKQVMAFLNIDKTRPAYVEDMLGVWLRRKPWFQECSNIQYYSQHASAGLPRASEDFARFIKFVTGLEDSLGTIKKKQHSFFVSLTLPDVRGADQILEQACVGSDAVELRVDLLEDPDSSNGIPTVDFVADQISYLRSRITLPVIFTIRTKGQGGRFPDDAHAEAMQLYRLAVRSGCEFVDLEIAFPDEMLRAVTEMKGYSKIIASHHDPNGELSWANMSWMKYYNRALEYGDVIKLVGVARNLDDNTALRKFKNWAEEAHDVPLIAINMGGNGQLSRILNGFMTPVSHPALPFRAAPGQLSATDIRKGLSLMGEIKKKRFALFGSPISESRSPALHNTLFAEMGLPHEYTRLETANVEDVKDFIRAPDFGGASVTIPLKLDIMPLLDEITAEAEIIGAVNTVVPVSDGEGKPQRLVGHNTDWQGMVQCLRNAGAYGADGSASALVVGGGGTSRAAIYALHQMGFSPIYIVGRNPAKLESMVSTFPTSYNIQIVEGNEKLEHVPHVAIGTIPADRPIDPGMREILCHMFERAQEADADASRTIEGSPRVLLEMAYKPRVTALMQLAVDAGWTTIPGLEALIGQGVHQVGLIDLLQMDITDGVQFQHWTGIRPLYERARVCCDILLSGRTMLTCS", - "output": "cytoplasm ; 3-dehydroquinate dehydratase activity ; 3-dehydroquinate synthase activity ; 3-phosphoshikimate 1-carboxyvinyltransferase activity ; ATP binding ; metal ion binding ; shikimate 3-dehydrogenase (NADP+) activity ; shikimate kinase activity ; amino acid biosynthetic process ; aromatic amino acid family biosynthetic process ; chorismate biosynthetic process ; phosphorylation" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MADQRMDISSTISDFMSPGPTDLLSGSLSTSGVDCNRKRKGSATDYQESMDTDKDDPHGRLEYAEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYKPTSLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFASTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDSEPDNEGCNLSCLVAIGRLHSHMVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHSMDSMLPSGEGGPKRTHPTVPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDASSPGGKKILNGGTPDIPSAGLLPGQAQETPGYPYSDSSSILGENPHIGIDMIDNDQGSSSPSNDEAAMAVIMSLLEADAGLGGPVDFSDLPWPL", - "output": "chromatoid body ; CLOCK-BMAL transcription complex ; cytoplasm ; nuclear body ; nucleus ; PML body ; transcription regulator complex ; aryl hydrocarbon receptor binding ; bHLH transcription factor binding ; DNA binding ; DNA-binding transcription activator activity, RNA polymerase II-specific ; DNA-binding transcription factor activity ; DNA-binding transcription factor activity, RNA polymerase II-specific ; DNA-binding transcription factor binding ; E-box binding ; Hsp90 protein binding ; protein heterodimerization activity ; RNA polymerase II cis-regulatory region sequence-specific DNA binding ; sequence-specific DNA binding ; sequence-specific double-stranded DNA binding ; transcription cis-regulatory region binding ; circadian regulation of gene expression ; circadian rhythm ; DNA-templated transcription ; maternal process involved in parturition ; negative regulation of cold-induced thermogenesis ; negative regulation of DNA-templated transcription ; negative regulation of fat cell differentiation ; negative regulation of glucocorticoid receptor signaling pathway ; negative regulation of TOR signaling ; oxidative stress-induced premature senescence ; positive regulation of canonical Wnt signaling pathway ; positive regulation of circadian rhythm ; positive regulation of DNA-templated transcription ; positive regulation of protein acetylation ; positive regulation of skeletal muscle cell differentiation ; positive regulation of transcription by RNA polymerase II ; proteasome-mediated ubiquitin-dependent protein catabolic process ; protein import into nucleus ; regulation of cell cycle ; regulation of cellular senescence ; regulation of DNA-templated transcription ; regulation of hair cycle ; regulation of insulin secretion ; regulation of neurogenesis ; regulation of protein catabolic process ; regulation of transcription by RNA polymerase II ; regulation of type B pancreatic cell development ; response to redox state ; spermatogenesis" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MNRKARRCLGHLFLSLGMVYLRIGGFSSVVALGASIICNKIPGLAPRQRAICQSRPDAIIVIGEGSQMGLDECQFQFRNGRWNCSALGERTVFGKELKVGSREAAFTYAIIAAGVAHAITAACTQGNLSDCGCDKEKQGQYHRDEGWKWGGCSADIRYGIGFAKVFVDAREIKQNARTLMNLHNNEAGRKILEENMKLECKCHGVSGSCTTKTCWTTLPQFRELGYVLKDKYNEAVHVEPVRASRNKRPTFLKIKKPLSYRKPMDTDLVYIEKSPNYCEEDPVTGSVGTQGRACNKTAPQASGCDLMCCGRGYNTHQYARVWQCNCKFHWCCYVKCNTCSERTEMYTCK", - "output": "cell surface ; endocytic vesicle membrane ; endoplasmic reticulum lumen ; extracellular exosome ; extracellular matrix ; extracellular region ; extracellular space ; glutamatergic synapse ; Golgi lumen ; plasma membrane ; presynapse ; Schaffer collateral - CA1 synapse ; cytokine activity ; frizzled binding ; receptor ligand activity ; signaling receptor binding ; angiogenesis ; apoptotic process ; asymmetric protein localization involved in cell fate determination ; axonogenesis ; canonical Wnt signaling pathway ; cartilage condensation ; cell fate commitment ; cell proliferation in forebrain ; cellular response to transforming growth factor beta stimulus ; central nervous system vasculogenesis ; cerebellar granule cell differentiation ; chondrocyte differentiation ; dendritic spine morphogenesis ; dorsal/ventral pattern formation ; embryonic axis specification ; embryonic digit morphogenesis ; embryonic forelimb morphogenesis ; embryonic hindlimb morphogenesis ; establishment of blood-brain barrier ; establishment of cell polarity ; excitatory synapse assembly ; lens fiber cell development ; negative regulation of apoptotic process ; negative regulation of neurogenesis ; neuron differentiation ; neurotransmitter secretion ; oviduct development ; positive regulation of DNA-templated transcription ; positive regulation of endothelial cell migration ; positive regulation of epithelial cell proliferation involved in wound healing ; positive regulation of excitatory postsynaptic potential ; positive regulation of excitatory synapse assembly ; positive regulation of gene expression ; positive regulation of JNK cascade ; positive regulation of protein localization to presynapse ; positive regulation of protein metabolic process ; positive regulation of synapse assembly ; positive regulation of transcription by RNA polymerase II ; postsynapse assembly ; presynapse assembly ; regulation of axon diameter ; regulation of postsynapse organization ; regulation of presynapse assembly ; regulation of synaptic vesicle exocytosis ; response to estradiol ; response to estrogen ; secondary palate development ; sex differentiation ; skeletal muscle satellite cell activation ; skeletal muscle satellite cell maintenance involved in skeletal muscle regeneration ; somatic stem cell division ; somatic stem cell population maintenance ; stem cell development ; synaptic vesicle recycling ; uterus morphogenesis ; Wnt signaling pathway, planar cell polarity pathway ; wound healing, spreading of epidermal cells" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MILYEYPFNERIRTLLRLEDLFERFTFFVAQEDAREHHVALTTLFEISEVAGRADLKSDLMKELERQRQTLAPFRGNPGIEQNALEAVLGEIEQTLANLAQMQGKTGQHLIDNEWLASIRSRAVIPGGTCKFDLPSYYAWQQWPAEQRRHDIAKWAMPLLPLRDAAMIVLRLARESGQASKVMAMQGSYQQMLSGRTYQLMQVRVPPELRVIPEASANKYMLWVRFTAQDGDVRPRAVDIDVPFQLTLCNL", - "output": "cytoplasm ; division septum assembly ; FtsZ-dependent cytokinesis" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MAGPGEYFAIGAYVSCRTCQETRLQGEVVAFDYPSKMLALKCPSSSGKANHADILLLNLDYVSDVEVINERTQTPPPLASLNITKLASRARLEKEEKLSQAYAISAGVSLDGQQLFQTIHKTIKDCKWQEKNIVVMDEVVISPPYQVENCKGKEGRALTHVCKIVEKHFRDVENQKGVQRNPVAQSQKETSTSS", - "output": "cytoplasm" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MPKRGKRAAAEDGEEPKSEPETKKSKGAAKKTEKEAAGEGPVLYEDPPDQKTSASGKSATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLTHQYWSAPSDKEGYSGVGLLSRQCPLKVSYGIGEEEHDQEGRVIVAEFESFILVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKDLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGEMLQAVPLADSFRHLYPNTAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKALGSDHCPITLYLAL", - "output": "centrosome ; cytoplasm ; endoplasmic reticulum ; mitochondrion ; nuclear speck ; nucleolus ; nucleus ; perinuclear region of cytoplasm ; transcription regulator complex ; 3'-5' exonuclease activity ; 3'-5'-DNA exonuclease activity ; chromatin DNA binding ; class II DNA-(apurinic or apyrimidinic site) endonuclease activity ; damaged DNA binding ; DNA binding ; DNA-(abasic site) binding ; DNA-(apurinic or apyrimidinic site) endonuclease activity ; double-stranded DNA 3'-5' DNA exonuclease activity ; double-stranded DNA exodeoxyribonuclease activity ; double-stranded telomeric DNA binding ; endonuclease activity ; metal ion binding ; NF-kappaB binding ; oxidoreductase activity ; phosphodiesterase activity, acting on 3'-phosphoglycolate-terminated DNA strands ; phosphoric diester hydrolase activity ; protein-containing complex binding ; RNA binding ; RNA endonuclease activity ; site-specific endodeoxyribonuclease activity, specific for altered base ; transcription coactivator activity ; aging ; base-excision repair ; cell redox homeostasis ; cellular response to cAMP ; cellular response to hydrogen peroxide ; cellular response to organonitrogen compound ; cellular response to peptide hormone stimulus ; DNA catabolic process, endonucleolytic ; DNA demethylation ; DNA recombination ; DNA repair ; negative regulation of smooth muscle cell migration ; positive regulation of G1/S transition of mitotic cell cycle ; positive regulation of transcription by RNA polymerase II ; regulation of apoptotic process ; regulation of mRNA stability ; response to organonitrogen compound ; response to xenobiotic stimulus ; telomere maintenance ; telomere maintenance via base-excision repair" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MAEAQKTVRTLTGRVVSDKMDKTITVLIERRVKHPIYGKYVKRSTKLHAHDETNQCKIGDKVSIRETRPQSKTKSWALVEVVERAVEV", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MKPDAHQVKQFLLNLQDTICQQLSAVDGAEFVEDSWQREAGGGGRSRVLRNGGVFEQAGVNFSHVHGEAMPASATAHRPELAGRSFEAMGVSLVVHPHNPYVPTSHANVRFFIAEKPGAEPVWWFGGGFDLTPFYGFEEDAIHWHRTARDLCLPFGEDVYPRYKKWCDEYFYLKHRNEQRGIGGLFFDDLNTPDFDHCFAFMQAVGKGYTDAYLPIVERRKAMAYGERERNFQLYRRGRYVEFNLVWDRGTLFGLQTGGRTESILMSMPPLVRWEYDYQPKDGSPEAALSEFIKVRDWV", - "output": "cytoplasm ; coproporphyrinogen oxidase activity ; manganese ion binding ; protein homodimerization activity ; protoporphyrinogen IX biosynthetic process" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MTAGSDLDDFRGLLAKAFDERVVAWTAEAEAQERFPRQLIEHLGVCGVFDAKWATDARPDVGKLVELAFALGQLASAGIGVGVSLHDSAIAILRRFGKSDYLRDICDQAIRGAAVLCIGASEESGGSDLQIVETEIRSRDGGFEVRGVKKFVSLSPIADHIMVVARSVDHDPTSRHGNVAVVAVPAAQVSVQTPYRKVGAGPLDTAAVCIDTWVPADALVARAGTGLAAISWGLAHERMSIAGQIAASCQRAIGITLARMMSRRQFGQTLFEHQALRLRMADLQARVDLLRYALHGIAEQGRLELRTAAAVKVTAARLGEEVISECMHIFGGAGYLVDETTLGKWWRDMKLARVGGGTDEVLWELVAAGMTPDHDGYAAVVGASKA", - "output": "flavin adenine dinucleotide binding ; oxidoreductase activity, acting on the CH-CH group of donors" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MTEDNKKQRLIWIDLEMTGLEPDENHIIEVATIVTDAQLNTLAEGPVIAVHQPQKHLDRMDDWNVKTHTGSGLVERVKESQHDERKAAAETIEFLRQYIDAGVSPMCGNSICQDRRFLAKHMPELEAFFHYRNLDVSTLKELAKRWNPEVANSFKKSGAHEALADIRESIAELQHYREHFFSK", - "output": "cytoplasm ; 3'-5'-RNA exonuclease activity ; nucleic acid binding" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MAKEHFNRSKPHVNVGTIGHVDHGKTTLTAAITTVLAKRGLSELRSFDSIDNAPEEKERGITINTSHVEYQTANRHYAHVDCPGHADYVKNMVAGAAQMDGAIIVVAATDGPMPQTREHILLARQVNVPRLVVFMNKCDMVDDEEMLELVEMDMRELLSFYDFDGDNTPIIRGSALGALNGEPQWEDKVMELMEAVDNWVPLPERDIDKPFLMPVEDVFSITGRGTVATGRIETGIVKTGDEVQIIGLGAEGMKSVVTGVEMFRKILDEGQAGDNVGLLLRGIDKDQIKRGMVISHPGKITPHKRFKAEVYILKKEEGGRHTPFHNKYRPQFYIRTLDVTGEITLPEGTEMVMPGDNVTITVELIYPVACNVGLRFAIREGGRTVGAGQITELID", - "output": "cytoplasm ; GTP binding ; GTPase activity ; translation elongation factor activity" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MKASVYDFTLKELSQLLKPSFRAKQLYLWLYAKYKTSFKDMQNNFSKDFIAYLEREFTLRTIEIAHVRKSIDGSKKYLFKSLRDNHTFEAVLLKMKDKKIDEETNAILEGEKYTVCVSCQIGCQVGCTFCFTQKGGFVRNLKASEIIQQALLIKEDNNLPIEKALNIVFMGMGEPLNNLDEVCKAIEIFNTGMQISPKRITISTSGVADKIPILAGKNLGVQLAISLHAVDDKTRSSLMPLNKKYNIECVLNEVRKWPLEQRKRVMFEYLLIKDLNDSLDCAKKLLKLLNGIKSKVNLILFNPHEGSKFERPSLESARMFADFLNSKGLLCTIRESKALDIEAACGQLREKKLSQQI", - "output": "cytoplasm ; 4 iron, 4 sulfur cluster binding ; metal ion binding ; rRNA (adenine-C2-)-methyltransferase activity ; rRNA binding ; tRNA (adenine-C2-)-methyltransferase activity ; tRNA binding ; rRNA base methylation" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MATGRRKANRTKKEETNWQERVIQIRRVSKVVKGGKKLSFRAIVVVGNERGQVGVGVGKASDVIGAVKKGVADGKKHLIDIPITKSNSIPHPIDGVGGGAKVMMRPAAPGTGVIAGGAVRTVLELAGVRNVLAKQLGSNNPLNNARAAVNALSTLRTLAEVAEDRGIAIEKLYI", - "output": "small ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MLKEFKTFIARGNVIDMAVGIIVGAAFTSIVKSLVNNLINPLIGLFIGRIDLSNLVLTVGDAQFKYGSFLNAVINFLIISFVVFLMVKAINTFRKKEDKKTEAPSEEVMYLKEITELLKKNKE", - "output": "plasma membrane ; mechanosensitive monoatomic ion channel activity" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MIIEEIQGNIANLSQDEKQKHVEKVYLENSDLVKRIQRVKTDHGNEIGIRLKQPIDLQYGDILYQDDTNMIIVDVNSEDLLVIKPRNLKEMGDIAHQLGNRHLPAQFTETEMLIQYDYLVEDLLKELGIPYSHEDRKVNQAFRHIGHSHD", - "output": "cytoplasm ; nickel cation binding ; unfolded protein binding ; protein folding ; protein-containing complex assembly ; urea metabolic process" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MKTLLLTLVVVTIVCLDLGYTLTCVTTKSIGGVTTEDCPAGQNVCFKRWHYVTPKNYDIIKGCAATCPKVDNNDPIRCCGTDKCND", - "output": "extracellular region ; toxin activity" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MNNLSYLEPDYSEFVEVDPTGRYGRYNEVLGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTELFTSGTLRQYRLRHKRVNIRAMKHWCRQILRGLHYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYEEAYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVMSGKKPDALYKVKDPEVKCFIEKCLATVSLRVSARELLDDPFLRIDDGEFDLRSVDMEDSVGPLYRQPHHLPDYYNYPSNSSSLNRQYSNGNYPSNSSSLNRQYSNGYNSHHEYQNGWAYNPAETEETHGIELFESRNNDDQEEEKKSGNVDITIKGKRRDDGGLFLRLRIADKEGRVRNIYFPFDIETDTALSVATEMVAELDMDDHGVTKIANMIDGEISSLVPSWRPGPEFEECLAAAAAANAASICNNCVSNRTSMGSVMDFLRTNPGANVIQCCRNGCGETHGRFEEITIRETEVRLRELWKLQQQQESRELSSIDSGHNHSEEEEEEEVLYEDPENMFSCEAGNEINHISGSGSFSFMPSKYCDEPSEKTENQVQQELRWLKAKCQIELRDIQDEQLKTRWPESGEEVEISPKDGFLGSVSGLGREEDTVKEMFGERLVPKCLKRTTSLPVDAIDS", - "output": "cytoplasm ; ATP binding ; protein kinase activity ; protein serine kinase activity ; protein serine/threonine kinase activity ; circadian rhythm ; intracellular signal transduction ; protein phosphorylation" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MTHSNRMLLGVNIDHVATLRQARGTRYPDPVKAALDAEEAGADGITVHLREDRRHIQERDVVVLKDVLQTRMNFEMGVTEEMMAFAEKIRPAHICLVPETRQELTTEGGLDVAGQEARIKAAVERLARTGAEVSLFIDADERQIEASRRVGAPAIELHTGRYADAQTPTEVAEELKRIVDGVAFGVGQGLIVNAGHGLHYHNVEAVAAIKGINELNIGHALVAHALFVGFKAAVAEMKALIVAASR", - "output": "cytoplasm ; pyridoxine 5'-phosphate synthase activity ; pyridoxine biosynthetic process" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MLWAIPELGSPCPISISYEMSDSQDPTTSPVVTTQVELGGCSRQGGGNGFLRFRQHQEVQAFLSLLEDSFVQEFLSKDPCFQISDKYLLAMVLVYFQRAHLKLSEYTHSSLFLALYLANDMEEDLEGPKCEIFPWALGKDWCLRVGKFLHQRDKLWARMGFRAVVSRQCCEEVMAKEPFHWAWTRDRRPHHGGVQRVCPQVPVRLPRGPGLSPPHCSPCGLPQHCSSHLLKPVSSKCPSLTSECHRPPSQNYLSRVKNAWGGDFLIVLPPQMQLEPGTYSLRIFPKPPARPGH", - "output": "cytoplasm ; nucleus ; protein kinase binding ; cell cycle ; positive regulation of cyclin-dependent protein serine/threonine kinase activity" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MGKLLLILGSAIALPSFAAAGGDLDISDTVGVSFWLVTAGMLAATVFFFVERDQVSAKWKTSLTVSGLITGIAFWHYLYMRGVWIDTGDTPTVFRYIDWLLTVPLQVVEFYLILAACTSVAASLFKKLLAGSLVMLGAGFAGEAGLAPVLPAFIIGMAGWLYMIYELYMGEGKAAVSTASPAVNSAYNAMMMIIVVGWAIYPAGYAAGYLMGGEGVYASNLNLIYNLADFVNKILFGLIIWNVAVKESSNA", - "output": "plasma membrane ; light-activated monoatomic ion channel activity ; photoreceptor activity ; phototransduction ; proton transmembrane transport" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MTIALGKFTKDEKDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL", - "output": "chloroplast thylakoid membrane ; photosystem II ; chlorophyll binding ; electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity ; iron ion binding ; oxygen evolving activity ; photosynthetic electron transport in photosystem II" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MAGNKGRGRAAYTFNIEAVGFSRGEKLPDVVLKPPPLFPDTDYKPVPLKTGEDEDYMLALKQELRETVKRLPYFIEPPEEKQDDIERYSKRYMKVYKEEWVPDWRRLPREMMPRKKCKKGDPKSKPSKAAAKATSLINSADVLKTIEELEKRGEGERSDEENEEKEGSKEKDKDDEEDGEEDAEQEDYDEEEQEEENDYINSYFDNGDDFGVDSDDNMDEATY", - "output": "cytosol ; nuclear body ; nucleoplasm ; nucleus ; RNA polymerase III complex ; chromatin binding ; cell population proliferation ; defense response to virus ; epithelial cell proliferation ; innate immune response ; positive regulation of innate immune response ; positive regulation of interferon-beta production ; transcription by RNA polymerase III" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MMIKQYLQVTKPGIIFGNLISVVGGFLLASKGVIDYPLFLATLFGVSLVVASGCVFNNYIDRDIDRIMERTKNRVLVKGLIDPKVSLIYASILGIAGMLLLYVGANPLAMWLAVIGFVIYVGVYSLYMKRKSVYGTLIGSLSGAAPPVIGYCAVTGQFDMGALILLLIFSLWQMPHSYAIAIFRFKDYQAANIPVLPVIKGISVTKNHITLYILAFMVATLMLTLSGYAGYKYLVVAAAVSVWWLGMALRGYKATNDSVWARKLFVFSIIAITSLSVMMSVDFNVPSSAGLLTYVG", - "output": "plasma membrane ; protoheme IX farnesyltransferase activity ; heme O biosynthetic process" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MNATSLLQLMWLASPALPIGGFSYSEGLEAAVDTARVATEEEASEWLLDQLDLSLTRSDLAVLAQSMPAWQCGDTARISQLNAWVLQTRESNELRAQTEQMGRSLLEWLRNHTTATAEQIELLANLQPTYPLAFALAASATQAPLRDCLLAYAFGWAENMVQAAIKSVPLGQSAGQRILQALAAQIPCAVDHALTLPDDARQAFSPMLAILSARHEVQYSRLFRS", - "output": "cytoplasm ; nickel cation binding ; nitrogen compound metabolic process" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQMWQHRNDPQFNRQFHHGDGQSFNAEDFDDIFSSIFGQHARQSRQRPAARGHDIEIEVAVFLEETLTEHKRTISYNLPVYNAFGMIEQEIPKTLNVKIPAGVGNGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPVSPWEAALGAKVTVPTLKESILLTIPPGSQAGQRLRVKGKGLVSKKQTGDLYAVLKIVMPPKPDENTAALWQQLADAQSSFDPRKDWGKA", - "output": "cytoplasm ; nucleoid ; bent DNA binding ; unfolded protein binding ; protein folding" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MNKKQRDAKNKKRFQQQNPLFKRKKFCRFTVAGVEQIDYKDLDTLKDFIGENGKITPARLTGTRSHYQRQLDTAIKRARFLALMPYTDQHKH", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MDNEKVTDTNPKEPSNVESIITTSEVTPSPPPSTTTSTTTNATTTITTSQPQANIIGGKRSRKDDEIISIQEALNDQLEEEKNLLEEAKEQEQEDWGDESICTFDKGYINQSVFACKTCQLSNDKLFGFCYGCSMHCHLYHDVYELFNKRNFRCDCGTKIQEPNNSFKCQLSGILKEDDNNNVNNINNSNNTTTTTTTTTTTTTTTNNNHLNDIDIGSYDKSQILNERNHYNHNFKGKYCYCDSPYDYKEDMIQCIFCEDWFHENCLKLNSNVTDIPSPGEFSDLICADCLSKNQFLLLYPQIRCYIENDHIIIGDNNNNNNNSNNSNSICKVEGGVITPNKKYDLFCKELWKDELCSCLKCKEIYKDKKVEFLFEKDENSLKKKNKTVDENLDNKPVNVFEMGQDVFSKTLPPTQQRALIEGFSDMKEKLKELFSKKLDKNQVITKQDIQSFFVDLNVNKKFKK", - "output": "ubiquitin protein ligase activity ; zinc ion binding ; protein ubiquitination" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MDKLADLNYTLSVITLMNDTLHSIIQDPGMAYFPYIASVLTVLFTLHKASIPTMKIALKTSKCSYKVIKYCIVTIINTLLKLAGYKEQVTTKDEIEQQMDRIVKEMRRQLEMIDKLTTREIEQVELLKRIHDNLITRPVDVIDMSKEFNQKNIKTLDEWESGKNPYEPSEVTASM", - "output": "extracellular region ; host caveola ; host cell rough endoplasmic reticulum membrane ; membrane ; metal ion binding ; monoatomic ion channel activity ; toxin activity ; induction by virus of host autophagy ; pore formation by virus in membrane of host cell ; protein complex oligomerization" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MSVRKILRMGDPILRKISEPVTEDEIQTKEFKKLIRDMFDTMRHAEGVGLAAPQIGILKQIVVVGSEDNERYPGTPDVPERIILNPVITPLTKDTSGFWEGCLSVPGMRGYVERPNQIRMQWMDEKGNQFDETIDGYKAIVYQHECDHLQGILYVDRLKDTKLFGFNETLDSSHNVLD", - "output": "metal ion binding ; peptide deformylase activity ; co-translational protein modification ; N-terminal protein amino acid modification ; peptidyl-methionine modification ; translation" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MNQKTLEKIEFPDIINKLWQKAESFPGKQLALKVRPLSDSKIIEEKLLEVEEGLSYLRFKTVDLSVLSDFSEIFLKLSKESMLTGQEIYRLGQLLKVSKDTFFEISRGAFPRLKQIVKLLFFDEALVKDIERSFWPEGTVKDEASPELKRIRGQIARLKDKMREAVEKYLKEPELAKYLQEPLISVRGDRFVLPVKASYKSQVPGIIHDRSNTGQTLFIEPYSAVEAGNELKTLELQEKEIIEKILKDFTQRLACNLTEIKRTYELLGEIDLIVAKARLALELDAYKPRISENGVLSFKQARHPLLGKKAVPFDLTLGKEFDLLIITGPNTGGKTVTLKTIGILTIMARAGLFIPASPETEIGLFGEVYVDIGDEQSIVQSLSTFSSHLLNLKFILENAREGDLVLLDELGTGTDPREGAALAKAILEELRGKKVKVVATTHTSELAAYAIETERVENASVEFDPESLKPTYRLHIGKPGRSNALYIAQGLGLKEQIIEKAKSFLKEEELKLDKLIFDVEQEKRQLEKAKEEVANLLISLKEKEAKLNDELENLEKTKEEIIRKYREKYQQKLLEIERKGKLVIEEIKEKIKTYEEKNLAKLLEEARQKTKEFSQNFALPFEPIKPYRPKVGETVELVEVGQKAEVLAVGENYAIVQAGIMKLNVSFDQIRPAQKQEKENEKGQVKKAGLELTKKQNFNLELDIRGMNTLEAEPVVEKYLDNAYLAGVEKVRIIHGKGTGALKKFLWDYLREVPFVKKFNFAPQNQGGDGATEVYLK", - "output": "ATP binding ; ATP hydrolysis activity ; ATP-dependent DNA damage sensor activity ; endonuclease activity ; mismatched DNA binding ; mismatch repair ; negative regulation of DNA recombination" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MDDPDCDSTWEEESEEDGEDGQADDTTDEDTGDDDGDAEEARPSLFQSRMTGYRNWRAMQDMQRYRHNYPDLTDQDCNGDMCNLSFYKNEICFQPNGALIEDILQNWKDNYDLLEENHSYIQWLFPLREPGVNWHAKPLTLKEVEAFKSSKEVRERLVRAYELMLGFYGFHLEDRGTGAVCRAQNFQPRFHNLNSHSHNNLRITRILKSLGELGLEHYQAPLVRFFLEETLVQHKLPSVRQSALDYFLFAVRCRHQRRELVYFAWEHFKPRREFVWGPRDKLRRFKPQTIPQPLTGPGQADKDEGSRDPSQEAGTQGRTCGSGRDLSGDSGTAEDPSLLNTKPSDGGTLDGNQRDEAKSLSPKESKKRKLEGNRQEQVPGEADPQGVSEVEKIALNLEECALSPISQEPREAEPPCPVARVANEVRKRRKVEEGAEGDGVVSNTQMQASALPPTPSECPEAQKDGNGPEDSNSQVGAEDSKSQVGPEDPNSQVGLEDPNSQVGPEDPNSQVGPEDPNSQVGPEDPNSQVGPEDPNSQVVGPEQAASKSPVEDPDSDTMGTSVDESEELARIEASAEPPKP", - "output": "membrane ; nucleus ; perinuclear region of cytoplasm ; opioid growth factor receptor activity" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MALLDFFLSRKKSTANIAKERLQIIVAERRRSDAEPHYLPQLRKDILEVICKYVQIDPEMVTVQLEQKDGDISILELNVTLPEAEESK", - "output": "cell cycle ; cell division ; regulation of division septum assembly" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL", - "output": "cytoplasm ; diaminopimelate epimerase activity ; lysine biosynthetic process via diaminopimelate" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MSNKGQLLQDPFLNALRKEHVPVSIYLVNGIKLQGNIESFDQYVVLLRNTVTQMVYKHAISTVVPARPVNFHPDSEQS", - "output": "RNA binding ; regulation of DNA-templated transcription" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MIVTETIIRFENVTKQFDNDPPVLDNVSFEIEKGKFYTLLGPSGCGKTTILRLIAGFLEASEGQIYLGDKVINQIPANKRPVNTVFQDYALFPHLNVYENVAFGLRIKKLKKDAIDKKVQEALRFVNLKGYEKREISEMSGGQRQRVAIARAIVNEPEVILLDEPLSALDLKLRTEMQYELRDLQKRLGITFIFVTHDQEEALAMSDEIFVLNKGEIQQSGTPIDIYDEPINKFVADFIGESNIVNGKMIQDFEVEFVERRFECVDQGFRPNEVVEVVIRPEDLEITSAEKGKLQVTVDWMLFRGVHYEVGCIDIDGNEWLVHTTRKVRVGDKIGLAFEPEAIHVMRLGETEEEFDKRLDSYDEVQ", - "output": "ATP-binding cassette (ABC) transporter complex ; ABC-type putrescine transporter activity ; ATP binding ; ATP hydrolysis activity" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MNKTYMANPQNVERKWYVVDAEGKTLGRLASKVAAILRGKHKPTFTPHVDCGDFVIIVNAEKIQVTGKKVTDKVYYRHSGYPGGQKATTFEQMIARRPERVLELAIKGMLPHNRLGRQMYRKLKVYAGPEHPHAAQKPEPLEV", - "output": "ribonucleoprotein complex ; ribosome ; structural constituent of ribosome ; translation" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "XEIYNKDGNK", - "output": "extracellular region" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MQKYISEARLLLALAIPVILAQIAQTAMGFVDTVMAGGYSATDMAAVAIGTSIWLPAILFGHGLLLALTPVIAQLNGSGRRERIAHQVRQGFWLAGFVSVLIMLVLWNAGYIIRSMENIDPALADKAVGYLRALLWGAPGYLFFQVARNQCEGLAKTKPGMVMGFIGLLVNIPVNYIFIYGHFGMPELGGVGCGVATAAVYWVMFLAMVSYIKRARSMRDIRNEKGTAKPDPAVMKRLIQLGLPIALALFFEVTLFAVVALLVSPLGIVDVAGHQIALNFSSLMFVLPMSLAAAVTIRVGYRLGQGSTLDAQTAARTGLMVGVCMATLTAIFTVSLREQIALLYNDNPEVVTLAAHLMLLAAVYQISDSIQVIGSGILRGYKDTRSIFYITFTAYWVLGLPSGYILALTDLVVEPMGPAGFWIGFIIGLTSAAIMMMLRMRFLQRLPSVIILQRASR", - "output": "plasma membrane ; antiporter activity ; xenobiotic transmembrane transporter activity ; sodium ion transport ; xenobiotic transmembrane transport" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MARTVNCVYLNKEADGLDFQLYPGDLGKRIFDNISKEAWGLWQKKQTMLINEKKLNMMNVDDRKFLEEQMTSFLFEGKEVEIEGFVPEKDQD", - "output": "iron ion binding" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MSDVTVAETPAVKTPTKAPKAPKSKTTKEPKAKVAAAHPPFINMVTAAISSLKERKGSSKIAILKYITANYKVGDQLTKINSRLRAALNKGVASKALVQSVGNGASGRFRVAEKAAATKKPVAKKPVAKKAATGEKKAKKTTVAKKTGDKVKKAKSPKKIAKPAAKKVAKSPAKKAAPKKAPAKKAAAPKA", - "output": "nucleosome ; nucleus ; double-stranded DNA binding ; nucleosomal DNA binding ; structural constituent of chromatin ; chromosome condensation ; negative regulation of DNA recombination ; nucleosome assembly" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MARVTVEDCLEHVKNRFELVMVATKRARQIAVRGDQPMVEWENDKPTVVALREIAEGYVTADILDED", - "output": "DNA-directed RNA polymerase complex ; DNA binding ; DNA-directed 5'-3' RNA polymerase activity ; DNA-templated transcription" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MQIGKYQLVRKLASGGMAEVFLAKAAGPRGFEKTLVLKRILPHLAEDAAFVEMFLGEARLAAQLEHPNIVQIFDFGEAEGSFFLAMEFIDGPNLRKLVKRAAEEALPPAFCAKVVAAAAEGLAYAHEFRDVETGEPLGLIHRDVSPDNILVSRQGAVKVVDFGIAKVAGQGHRTLTGVVKGKVAYMPPEQLQAKAMDRRVDVYALGVVLYELLTGKRPFDATTDVSVMQAILFESFIPVSARRPDVPVALQQVLDKALAKDRERRYADCRALQDDLERFVLSTGEPVGAYQIAQRIAQWVPEVAAAPAMTPSQGGSKGAVASQAKADARSASMVSPPVDSTSPTTPMPRSLVAPVEVPADSTSPTTPMPVAIGGVVQALEPRSSPQQDTLQSYPVVVKTPALRADASARGASRPRAQSRASGVKVQAPQARDEDVVAMAAASSPPSGGASPAPTTPEDADDAVHTRSTEYAATVPSGRPGGRIAGIVGAVVALLVGGAVTVMRGDDSEVSPVRVNPPPLTHLPREPAVPSQGGRNVPQEKPAANVNAGARDSNDGAQAKPQVSTDVSVVPQEPHVARDATTPEAGLPTVKDAPPENGGAASKEGSAVVAKREPAKASGDPEPNPSRVRERAPTQKVAAVAKGRLEFRIRPYAVVSLDGKVLGQTPFAAVEVPEGRHTVRLVNKELGKDVTRTVDVKAGQATVFKLNLEAE", - "output": "plasma membrane ; ATP binding ; protein serine kinase activity ; protein serine/threonine kinase activity ; protein phosphorylation" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MTGIVEVIGREILDSRGNPTVEVDVILECGAKGRAAVPSGASTGSHEAVELRDEDKGRYLGKGVLKAVNNVNTEIREALLGMDALNQVEIDKVMLELDRTPNKGRLGANAILGVSLAVAKAAAEALGQPLYKYLGGVNSKELPLPMMNILNGGAHADSAVDLQEFMIQPVGAKSFREAMQMGAEVFHHLGKILKANGDSTNVGNEGGYAPSKIQGTEGALALISEAVKAAGYELGKDITFALDAASSEFCKEVNGKYEYHFKREGGVVRTTDEMIKWYEELINKYPIVSIEDGLGEDDWDGWVKLTKAIGDRVQIVGDDLFVTNTERLKKGIELGAGNSILIKLNQIGSLTETLDAIEMAKRAGYTAVVSHRSGETEDATIADVAVATNAGQIKTGSTSRTDRMAKYNQLLRIEEELGSVAQYNGRDVFYNIKK", - "output": "cell surface ; extracellular region ; phosphopyruvate hydratase complex ; magnesium ion binding ; phosphopyruvate hydratase activity ; glycolytic process" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MSQMLHIEIPNFGNTVLGCLNEQRLLGLYCDVSIVVKGQAFKAHRAVLAASSLYFRDLFSGNSKSAFELPGTVPPACFQQILSFCYTGKLTMAASEQLVVMYTAGFLQIQHIVERGTDLMFKVSSPHCDSQTAMIEDASSEPQSPCNQLQPATAAYVTSPSVPIPLLTRVKHEAMEMPPASGPGLASKRPLETGPRDGVAVATGAAGTPGTAPLKLPRVSYYGVPSLATLIPSIQQVPYPPGERTSPGASSLPTTDSPTSYHNEEDEEDDEAYDTMVEEQYGQMYIKATGNYAVQEKPEPVPLESRSCVLIRRDLVALPASLISQIGYRCHPKLYSEGDPGEKLELVAGSGVYITRGQLMNCHLCAGVKHKVLLRRLLATFFDRNTLANSCGTGIRSSTSDPSRKPLDSRVLNAVKLYCQNFAPSFKESEMNVIAADMCTNARRVRKRWLPKIKSMLPEGVEMYRSVMGASAASLPLDPEFPSAAPQVFEQRIYAERRSDAATIVALRTDAVNVDLSTSANPAFEANEEVDGGGSVIQEVAAPEQLPADGQSSPQAFEQGNTSSSRPQTPVATATRRPEGTYAGTL", - "output": "chromatin ; mitochondrion ; nucleolus ; nucleus ; DNA-binding transcription factor activity, RNA polymerase II-specific ; DNA-binding transcription repressor activity, RNA polymerase II-specific ; histone deacetylase binding ; protein homodimerization activity ; protein-containing complex binding ; RNA polymerase II cis-regulatory region sequence-specific DNA binding ; negative regulation of cell population proliferation ; negative regulation of DNA-templated transcription ; negative regulation of G1/S transition of mitotic cell cycle by negative regulation of transcription from RNA polymerase II promoter ; negative regulation of transcription by RNA polymerase II ; positive regulation of intrinsic apoptotic signaling pathway in response to DNA damage ; protein homooligomerization ; protein-containing complex localization" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAIEAPSTNG", - "output": "chloroplast thylakoid membrane ; photosystem II ; chlorophyll binding ; electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity ; iron ion binding ; oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor ; oxygen evolving activity ; photosynthetic electron transport in photosystem II ; response to herbicide" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MSLINKEILPFTAQAFDPKKDQFKEVTQEDLKGSWSVVCFYPADFSFVCPTELEDLQNQYEELQKLGVNVFSVSTDTHFVHKAWHDHSDAISKITYTMIGDPSQTITRNFDVLDEATGLAQRGTFIIDPDGVVQASEINADGIGRDASTLAHKIKAAQYVRKNPGEVCPAKWEEGAKTLQPGLDLVGKI", - "output": "cytoplasm ; NADH-dependent peroxiredoxin activity ; response to oxidative stress" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MSSIKLIVGLANPGAEYAQTRHNAGAWYVDLLAERHNQSLKEESKFFGYTARLNLAGQDIRLLVPATFMNLSGKAVAAMASFYRILPEEILVAHDELDILPGMAKLKLGGGNGGHNGLKDIQNKLGNNPNFYRLRIGIGHPGDKSKVTGFVLGKPPASEQTLIDDAIDESIRCTEVLLNEGMTKAMNRLHAFKASA", - "output": "cytoplasm ; aminoacyl-tRNA hydrolase activity ; translation" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MTKQALDATIADMAGPFLASLGLELWGIELSYGGRTVVRLFVDGPEGVTIDQCAEVSRHVGLALEVEDVISSAYVLEVSSPGLERPFFRAEQMSPYVGRQIELTLIDPTPEWPGRRKFRGELLAVEGDTVVLRPEGAPAPEAEEAVLRTSWQGVRKANLIHVFPEPGHKPRR", - "output": "cytoplasm ; ribosomal small subunit biogenesis" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MLTTTIIAGIISFILTILAMPFFIRFYQLKKINGQQMHEDVKQHLAKAGTPTMGGTVFLLVAALVTFICAFVLHITGGPAFGATLAILFIVLIYGTIGFLDDFLKIFKKINQGLTAWQKMALQLIGGLVFYLVHVKPSGTDSLNLFGFPLHLGVFYIIFILFWVVGFSNAVNLTDGIDGLASISVVISLLTYSVIAYVQNQFDVLLIIISMVGALLGFFVYNHKPAKVFMGDVGSLALGAMLAAISITLRQEWTLLIIGIVYVLETASVMLQVSYFKWTKKRKGEGQRIFRMTPFHHHLELGGLRLRESGKKWSEWQVDFFLWSIGLLGSLLILAILYL", - "output": "plasma membrane ; metal ion binding ; phospho-N-acetylmuramoyl-pentapeptide-transferase activity ; UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate transferase activity ; cell cycle ; cell division ; cell wall organization ; peptidoglycan biosynthetic process ; regulation of cell shape" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MFSLSFIVIAVIIVVALLILFSFVPIGLWISALAAGVHVGIGTLVGMRLRRVSPRKVIAPLIKAHKAGLALTTNQLESHYLAGGNVDRVVDANIAAQRADIDLPFERAAAIDLAGRDVLEAVQMSVNPKVIETPFIAGVAMNGIEVKAKARITVRANIARLVGGAGEETIIARVGEGIVSTIGSSKHHTEVLENPDNISKTVLSKGLDSGTAFEILSIDIADVDISKNIGADLQTEQALADKNIAQAKAEERRAMAVATEQEMKARVQEMHAKVVEAESEVPLAMAEALRSGNISVKDYYNLKNIEADTGMRNAINKRTDQSDDESPEH", - "output": "membrane raft ; plasma membrane" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MIQFTKMHGLGNDFMVVDGVTQNVFFSPEQIRRLADRNFGIGFDQLLLVEPPYDPDLDFHYRIFNADGTEVEQCGNGARCFARFVRNKGLTNKSKIRVSTSSGKMTLRLERDGTVTVNMGVPILEPSQIPFKAKKPEKTYLLQTPMQTFLCGAASMGNPHCVLDVEDVASASVAEIGAMLTKHERFPRGVNVGFMQVVDSGHIKLRVYERGAAETLACGTGACAAVVVGQVQGKLGQQVRVDLPGGTLTINWEGEGKPLWMTGPAQHVYDGQIQL", - "output": "cytoplasm ; diaminopimelate epimerase activity ; lysine biosynthetic process via diaminopimelate" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MNMAKDIKFSADARAAMVRGVDMLADTVKVTLGPKGRNVVLEKAFGSPLITNDGVTIAKEIELEDHFENMGAKLVSEVASKTNDIAGDGTTTATVLTQAIVHEGLKNVTAGANPIGIRRGIETATATAVEALKAIAQPVSGKEAIAQVAAVSSRSEKVGEYISEAMERVGNDGVITIEESRGMETELEVVEGMQFDRGYLSQYMVTDNEKMVADLENPFILITDKKVSNIQDILPLLEEVLKTNRPLLIIADDVDGEALPTLVLNKIRGTFNVVAVKAPGFGDRRKAMLEDIAILTGGTVITEDLGLELKDATMTALGQAAKITVDKDSTVIVEGSGSSEAIANRIALIKSQLETTTSDFDREKLQERLAKLAGGVAVIKVGAPTETALKEMKLRIEDALNATRAAVEEGIVAGGGTALITVIEKVAALELEGDDATGRNIVLRALEEPVRQIALNAGYEGSVVIDKLKNSPAGTGFNAATGEWVDMIKTGIIDPVKVTRSALQNAASVASLILTTEAVVANKPEPAAPAPAMPAGMDPGMMGGF", - "output": "cytoplasm ; ATP binding ; ATP-dependent protein folding chaperone ; isomerase activity ; unfolded protein binding ; protein refolding" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MLVWLAEYLVKFYSGFNVFSYLTFRAIVSLLTALFISLWMGPHLIAWLQKLQIGQVVRNDGPESHFSKRGTPTMGGLMILFSITISVLMWAYPSNPYVWCVLFILIGYGIVGFIDDYRKVVRKNTKGLIARWKYFWQSIIALAAAFTMYSIGKDTSATELVVPFFKDIMPQLGLLYVLLAYFVIVGTSNAVNLTDGLDGLAIMPTVFVAAGFALVAWATGNVNFAAYLHIPYLRHAGELVIVCTAIVGAGLGFLWFNTYPAQVFMGDVGSLALGGALGTIAVLLRQEFLLVIMGGVFVVETLSVILQVGSFKLRGQRIFRMAPIHHHYELKGWPEPRVIVRFWIISLMLVLIGLATLKVR", - "output": "plasma membrane ; metal ion binding ; phospho-N-acetylmuramoyl-pentapeptide-transferase activity ; UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate transferase activity ; cell cycle ; cell division ; cell wall organization ; peptidoglycan biosynthetic process ; regulation of cell shape" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MAKKSQIVKWLKPKKYKVREYNRCRICGRPRGYIRKFGLCRLCFRELALKGELPGVRKASW", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; zinc ion binding ; translation" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MNRNPYSRYYVPGPSPWPFFVAISANGMAVGLILWLHRTPSFLLMGMSLVCMLLSTFSWWRDLIREGDIGFHTRFVIKSFRDCVALFILSEVMFFFTFFWTFFHNALSPSCELGMRWPPPGIRTPNPSSTSLFETGLLISSGLFVTQAHKSMRLKDYDVGPFIGLVVTIVCGTVFFLVQLREYYWNSYTIADSVYGSVFYLLTGFHGMHVVVGTIWLMVSLVRLWRGEFSSQRHFGFEACIWYWHFVDVVWVALWCLVYVWFGGW", - "output": "mitochondrial inner membrane ; cytochrome-c oxidase activity ; aerobic electron transport chain" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MALFHNPEERPYKLPDLCRTLDTTLHDVTIDCVYCRRQLQRTEVYEFAFSDLCVVYRDGVPFAACQSCIKFYAKIRELRYYSESVYATTLETITNTKLYNLLIRCMSCLKPLCPAEKLRHLTTKRRLHKIAGNFTGQCRHCWTSKREDRRRIRQETQV", - "output": "host cell cytoplasm ; host cell nucleus ; DNA binding ; metal ion binding ; PDZ domain binding ; DNA-templated transcription ; modulation by symbiont of host protein ubiquitination ; modulation by virus of host apoptotic process ; regulation of DNA-templated transcription ; suppression by virus of host type I interferon-mediated signaling pathway ; suppression by virus of host viral-induced cytoplasmic pattern recognition receptor signaling pathway via inhibition of IRF3 activity" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MEPRVGNKFRLGRKIGSGSFGEIYLGTNIHTNEELAIKLENVKTKHPQLLYESKLYRILQGGTGVPNVKWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKSVLMLADQMINRVEFFHSKSFLHRDLKPDNFLMGLGRRANQVYIIDFGLAKKYRDSTTHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYILMYFLKGSLPWQGLKAGTKKQKYERISEKKVSTSIEALCRGYPSEFASYFHYCRSLRFDDKPDYAYLKRIFRDLFIREGFQFDYVFDWTILKYQQSQLTAPPSRALNPAVGTSAALPPGISNIDRYTGEEEGRPHMESSRRRVSGALDNSGNISNQPTSSSARDSMIPSSSLFAQSAGSSRRVTAVSGSRDNFPGSEELLQRSRTGDVSRGVIPRNSPGEAGKSTRRHYESVVKGIDNLQVSDEHHPH", - "output": "cytoplasm ; nucleus ; plasmodesma ; ATP binding ; protein serine kinase activity ; protein serine/threonine kinase activity ; endocytosis ; peptidyl-serine phosphorylation ; signal transduction" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MKIRSQVGMVLNLDKCIGCHTCSVTCKNVWTSREGVEYAWFNNVETKPGQGFPTDWENQEKYKGGWIRKINGKLQPRMGNRAMLLGKIFANPHLPGIDDYYEPFDFDYQNLHTAPEGSKSQPIARPRSLITGERMAKIEKGPNWEDDLGGEFDKLAKDKNFDNIQKAMYSQFENTFMMYLPRLCEHCLNPACVATCPSGAIYKREEDGIVLIDQDKCRGWRMCITGCPYKKIYFNWKSGKSEKCIFCYPRIEAGQPTVCSETCVGRIRYLGVLLYDADAIERAASTENEKDLYQRQLDVFLDPNDPKVIEQAIKDGIPLSVIEAAQQSPVYKMAMEWKLALPLHPEYRTLPMVWYVPPLSPIQSAADAGELGSNGILPDVESLRIPVQYLANLLTAGDTKPVLRALKRMLAMRHYKRAETVDGKVDTRALEEVGLTEAQAQEMYRYLAIANYEDRFVVPSSHRELAREAFPEKNGCGFTFGDGCHGSDTKFNLFNSRRIDAIDVTSKTEPHP", - "output": "cytoplasmic side of plasma membrane ; membrane ; NarGHI complex ; 3 iron, 4 sulfur cluster binding ; 4 iron, 4 sulfur cluster binding ; electron transfer activity ; metal ion binding ; nitrate reductase activity ; anaerobic electron transport chain ; anaerobic respiration ; nitrate assimilation ; nitrate metabolic process" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MGIDQRPLAIAVMGPTASGKTATAIALARQLDGEIVSVDSALVYRHLDIGSAKPDAAERAQAPHHLLDLRDPWQTYSAAEFAADASRVVVDIVARGKMPILAGGTGLYFRALLQGLSPMPEADPAMRAALAAEAAERGWAALHAELAQIDPAAATRIHATDPQRIQRALEVYRLTGTPITEWQRRPGVAPLPVRTLKLILAPHDRAVLHQRIEARFDAMLAQGFLDEVRALRAMPEMAAVEAPLDLPAVRAVGYRQAWEYLDGEGDAARFRDKAIFATRQLAKRQLTWLRGELDARWFDPHIDQERLAGAVSTFVAR", - "output": "ATP binding ; tRNA dimethylallyltransferase activity ; tRNA processing" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MSDPVFFPFAGPISLGEVAALAGAALPAGLDGTLAVAGAAPLESAGPDDLAYMDNAKYAEALGRTRARACLVSPRFAARVPEGTAALVTPQPYRGFAQVLARLFPSAARPGSLFGATGVSPGSFVHPEARLEPGVVVDPGVVIGPGAEIGSGTVLAAGAVVGPGTRIGRGCAIGPGASLLHALVGNRVIVHGGARIGQDGFGFAMGAGGHLKVPQVGRVIIQDDVEIGANTTIDRGASRDTIVGEGTKIDNLVQIAHNVVIGRHCVIVAQVGISGSTTLEDYVVLGGQVGVVGHLRIGMGAQIAGSSNINKDVPPGARWGGTPAKPVREWFREMTTLKRLAARERGPEDTDG", - "output": "N-acyltransferase activity ; lipid A biosynthetic process" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MMENYKHTTVLLDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKTIDDPRFSIIHGPFSALGEYVAERDLIGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDMRMDPTRGQSAAEWLQTAEEADIAWVLKTYGEERFAKRIARAIVERNREQPMTRTKELAEVVAAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLNVLAPGGRLSIISFHSLEDRIVKRFMRENSRGPQVPAGLPMTEEQLKKLGGRQLRALGKLMPGEEEVAENPRARSSVLRIAERTNA", - "output": "cytoplasm ; rRNA (cytosine-N4-)-methyltransferase activity ; rRNA base methylation" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MSEFIAENRGADAITRPNWSAVFSVAFCVACLIIVEFLPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSLPGEPSHQKQNTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFIGTSLSSFILKRSVKLALAGAPLILAVSALVLTLWGSDKIVATGVAIIWGLTFALVPVGWSTWITRSLADQAEKAGSIQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLLTALLVTAKVKMKKS", - "output": "plasma membrane ; antiporter activity ; purine nucleoside transmembrane transporter activity" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MRFYRTYLLVAGAFCSLCTLAVIFNCGWDDSPPATPSAINGGGSNAPLISSPTNLPETFLYISILTSPNETERRQNVRDTWFRLSTKGPSVFIAKFAVGTMGLAAEDRRLLAEENEKFGDLALLDRHEESYERLAKKTLACFVHAFANFKFKFFLKTDIDSFVRITPLIINLKQIQDPMLYWGFLDGRAKPFRKGKWKEPEWNLCDRYLPYQLGGGYVLSYELIRFLAINAQLFRHYRNEDVSVGAWIGGLDVKYVHDPRFDTEWRSRGCNNEYLITHKHTEQEMQEMFENLKKTGKLCAKEFQKHPSYVYDFSKAPSECCTRVNGSNIP", - "output": "Golgi apparatus ; Golgi membrane ; membrane ; galactosylxylosylprotein 3-beta-galactosyltransferase activity ; UDP-galactosyltransferase activity ; chondroitin sulfate biosynthetic process ; embryo development ending in birth or egg hatching ; glycosaminoglycan biosynthetic process ; heparan sulfate proteoglycan biosynthetic process ; morphogenesis of an epithelium ; oviposition ; protein O-linked glycosylation ; reproduction ; vulval development" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MTDRTQRELGWPEILNALAARCRLPAGRNRALALPFQPTAEAAREALALVGEARRLSELALALPLGGVGDVEGHLERASKGGVLEPLALRECAALARAAARTRGLLEARASETPRLWALAEPLSPSAALADRIERAIEPSGAISDRASAELAQARERSRGLHRALKAQVETLLADADMQRHLRDTYFTIRNERYVLPVLASARRAVPGIVHNASQSGQTLFVEPDSMVELGNELSIANAVAAEEEQRILRELTGALMADSGALARDLGILAALDVLEGSALLASDLDAHAPEVLSPFDGLRVGGAGAGFELLSLRHPLLVLQGKKVVPSHVRLDAPARALIVSGPNGGGKTVAITAVGLSALMLRAGLPVAAAEGSRLPFFLEVKAAVDERGDLAKDLSTFTAHLAAVKEMLAGAVPGSLILVDEIAADTDPREGAALAAAILESLVERGAAVLVTTHLDELKALALTDPRYANARVGFDAERLAPTYQLHLGSPGSSSAIEVAARVGLPAPLVERARAALTGHGGALGQALRALDDERARLAEERRAAESARDAARKAEERARAAEEVARRAQREAAARMGEALADELEAARAEVAELLAGLQARPTVKAATDAARQLDAWRATVAQAAKATQARADAGAEALPGGEVRPGVRVRIVSLGQEGEVVEVDGKDALVRAGPLKVRRPVADLVPLLGKAKDAAKLGRSRSEKLQAASEARPSAPPGLERRLDVRGLRVEELLREVERFLDRLYSDGEADCLILHGHGTGALKQALRDHLSASPYVGAFRAGDRHEGGDAVTVVSLRR", - "output": "ATP binding ; ATP hydrolysis activity ; ATP-dependent DNA damage sensor activity ; endonuclease activity ; mismatched DNA binding ; mismatch repair ; negative regulation of DNA recombination" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MKEFIVLSEEVKAGQAKGLPIVALESTIISHGMPYPQNVQTAREVEQIIRDNGAVPATIALIDGKIKIGLSDEELEMFGNAQGVAKASRRDLGYLLATKKLGATTVAATMICAELAGIEIFVTGGIGGVHRGAETTMDVSADLEELAQTNVAVICAGAKSILDIGLTLEYLETKGVPVVGYGTDELPAFYTRQSGFDVNFQLDTPEEIAEMLSAKWQLGLKGGAVIANPIPEAEALEHGFITNIIEKALVEAEENGIQGKNVTPFLLGKVKELTEGKSLDANIALVKNNAVVGAKIAVAFNQLH", - "output": "hydrolase activity, acting on glycosyl bonds ; metal ion binding ; pseudouridylate synthase activity ; nucleobase catabolic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MRSDKIKKGVEQAPARSLLHATGQIKSPGDMDKPFIAICNSYIDIVPGHVHLRELADVAKEAIREAGGIPFEFNTIGVDDGIAMGHIGMRYSLPSREVIADAAETVINAHWFDGVFYIPNCDKITPGMLLASVRTNVPAIFCSGGPMKAGLSAHGKALTLSSVFEAVGAFKDGSMSQEDFLDMEANACPTCGSCAGMFTANSMNCLMEILGMAVPGNGTTLAVSDARRDLIRESAFHLMDLVKKDIRPRDIITKDAIDDAFALDMAMGGSTNTVLHTLALANEAGIEDYDLERINDIAKRVPYLSKIAPSSSYSMHDVHEAGGVSAIVKELVDLGGAIHPDRITVTGKTIRENVADAKINNTDVIHPKENPYSPVGGLSMLFGNIAPKGAAIKVGGVDPSVQVFKGEAICFSSHDEAVEAIDNHTVREGHVVVIRYEGPKGGPGMPEMLAPTSSIVGRGLGKDVALITDGRFSGATRGIAVGHISPEAAAGGPIALVHDGDIITIDLPNRTLNVDVPDEVLEERRKELPKFKAKVKTGYLARYTALVTSAHTGGILQIPEDLID", - "output": "cytosol ; 2 iron, 2 sulfur cluster binding ; dihydroxy-acid dehydratase activity ; hydro-lyase activity ; magnesium ion binding ; isoleucine biosynthetic process ; valine biosynthetic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MNHIQEAFLNTLKVERNFSEHTLKSYQDDLIQFNQFLEQEHLQLNTFEYRDARNYLSYLYSNHLKRTSVSRKISTLRTFYEYWMTLDENIINPFVQLVHPKKEKYLPQFFYEEEMEALFKTVEEDTSKSLRDRVILELLYATGIRVSELVNIKKQDIDFYANGVTVFGKGSKERFVPFGAYCRQSIENYLEHFKPIQSCNHDFLIVNMKGEAITERGVRYVLNDIVKRTAGVSEIHPHKLRHTFATHLLNQGADLRTVQSLLGHVNLSTTGKYTHVSNQQLRKVYLNAHPRAKKENET", - "output": "cytoplasm ; DNA binding ; tyrosine-based site-specific recombinase activity ; cell division ; chromosome segregation ; transposition, DNA-mediated" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MQGNLEVLEGLARRLDISVPVDQLETEVQSRLKRLARSVKMHGFRPGKAPLSAVARQHGAGVRQEVLGETLKTRFGEAVQTHQLRIAGYPRFEPKADASAAAEMTFSASFEVYPEVKIDALDSATLNRPVVELGDADVAKTLEVLQKQRRTFATAARAAAEGDLVKFDYQGTVDGAPFEGGRGEDFAAVIGEGRLLKDFEQALVGLKAGDSKGFDLTFPAEYAARELADKTAHFEVQVKEVQAPVLPPVDAEFAEALGVEDGDVEKLKAEVKSNLEREVKRRVQAKLKEQAMELLLQKSTLDLPRSLVEMEMDRLRRMTEADMQSRGVQSMKLSADMFTGQAERRVRLGLILAEIVQANKLAAQPEQIRSLIQDQAQSYEEPDQVVQWYYQSPERMQEIESLALEENVVAWVADQATVVDVATSFDELMGRA", - "output": "cytoplasm ; peptidyl-prolyl cis-trans isomerase activity ; cell cycle ; cell division ; protein folding ; protein transport" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MGSTSSLYAAIDLGSNSFHMLVVREVAGSIQTLTRIKRKVRLAAGLNSENALSNEAMERGWQCLRLFAERLQDIPPSQIRVVATATLRLAVNAGDFIANAQEILGCPVQVISGEEEARLIYQGVAHTTGGADQRLVVDIGGASTELVTGTGAQTTSLFSLSMGCVTWLERYFADRNLGQENFDAAEKAAREVLRPVADELRYHGWKVCVGASGTVQALQEIMMAQGMDERITLEKLQQLKQRAIHCGRLEELEIDGLTLERALVFPSGLAILIAIFTELNIQCMTLAGGALREGLVYGMLHLAVEQDIRSRTLRNIQRRFMIDIDQAQRVAKVAANFFDQVEKEWHLEAISRDLLISACQLHEIGLSVDFKQAPQHAAYLVRNLDLPGFTPAQKKLLATLLLNQTNPVDLSSLHQQNAVPPRVAEQLCRLLRLAIIFASRRRDDLVPEMTLQANHELLTLTLPQGWLTQHPLGKEIIAQESQWQSYVHWPLEVH", - "output": "guanosine-5'-triphosphate,3'-diphosphate diphosphatase activity ; guanosine pentaphosphate catabolic process ; guanosine tetraphosphate biosynthetic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MVDKRESYTKEDLLASGRGELFGAKGPQLPAPNMLMMDRVVKMTETGGNFDKGYVEAELDINPDLWFFGCHFIGDPVMPGCLGLDAMWQLVGFYLGWLGGEGKGRALGVGEVKFTGQVLPTAKKVTYRIHFKRIVNRRLIMGLADGEVLVDGRLIYTANDLKVGLFQDTSAF", - "output": "cytoplasm ; (3R)-3-hydroxydecanoyl- dehydratase activity ; (3R)-hydroxymyristoyl- dehydratase activity ; trans-2-decenoyl-acyl-carrier-protein isomerase activity ; fatty acid biosynthetic process" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MSKLIEYDETARRAMEAGVDKLAETVRVTLGPRGRHVVLAKSFGGPTVTNDGVTVARDIDLEDPFENLGAQLVKSVATKTNDVAGDGTTTATVLARALVKTGLRLVAAGINPIALGSGIGKAADAVSEALLASATPVSGKDAIAQVATVSSRDQLIGDLVGEAMSKVGHDGVVSVEESSTLGTELEFTEGVGFDKGYLSAYFVTDFDAQQAVLEDPLILLHQDKISSLPDLLPLLEKVAESGKPLMIIAEDIEGEALATLVVNSIRKTLKAIAVKSPYFGDRRKAFLQDLAAVTGAEVVNPDAGLVLREVGLEVMGSARRVVVSKDDTIIVDGGGAPEAVEARVNLLRSEIDRSDSEWDREKLGERLAKLAGGVAVIKVGAATETELKKRKESVEDAVAAAKAAVEEGIVAGGGSALIQARNALKDLRASLSGDEAVGVDVFSEALAAPLYWIATNAGLDGSVVVNKVSEVPAGHGLNAATLTYGDLAADGIVDPVKVTRSAVLNASSVARMVLTTETAIVDKPAEPEDDGHGHHGHAH", - "output": "cytoplasm ; ATP binding ; ATP-dependent protein folding chaperone ; isomerase activity ; unfolded protein binding ; protein refolding" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MALTAEEKQDIIAKYATHEGDTGSPEVQIALLTKRIADLTEHLKFHKHDHHSRRGLLLMVGDRRRLLDYLKKVDIERYRSLIERLGLRR", - "output": "cytoplasm ; ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MKVSRHAKILEIINSKDIDTQEELAEELKKMGMNVTQATVSRDIKELKLIKVLGNTGKYKYATINHTESYMSDKLINIFAQTVINVENIDKLIIIKTISGSAPAAAEAIDTLGFDGVAGTIAGDNTIFVMARTNEKAQEITMKLKKIITA", - "output": "cytoplasm ; arginine binding ; DNA binding ; DNA-binding transcription factor activity ; arginine biosynthetic process ; protein complex oligomerization" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MKKFTCVQDIGDLKSALAESFEIKKDRFKYVELGRNKTLLMIFFNSSLRTRLSTQKAALNLGMNVIVLDINQGAWKLETERGVIMDGDKPEHLLEAIPVMGCYCDIIGVRSFARFENREYDYNEVIINQFIQHSGRPVFSMEAATRHPLQSFADLITIEEYKKTARPKVVMTWAPHPRPLPQAVPNSFAEWMNATDYEFVITHPEGYELDPKFVGNARVEYDQMKAFEGADFIYAKNWAAYTGDNYGQILSTDRNWTVGDRQMAVTNNAYFMHCLPVRRNMIVTDDVIESPQSIVIPEAANREISATVVLKRLLENLP", - "output": "amino acid binding ; ornithine carbamoyltransferase activity ; arginine biosynthetic process" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MTATAQQLEYLKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIDLLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPGKLPRETISETYDLEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINLFDLGGEQRLEKQGITSYSLVPFPGH", - "output": "cytoplasm ; adenine phosphoribosyltransferase activity ; adenine salvage ; AMP salvage ; purine ribonucleoside salvage" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MMQSFENVTVVKKANRYFDDKVTSRTVIFPDGSKKTLGIMLPGSYEFGTDKAEIMEILEGELEVFLPQESKWRTLRGGESFDVPAHSRFSLKVNETVDYCCSYVG", - "output": "guanosine phosphorylase activity ; purine-nucleoside phosphorylase activity ; pyrimidine-nucleoside phosphorylase activity ; thymidine phosphorylase activity ; uridine phosphorylase activity" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MMEEISLQEKIEKLPLGVACIDGLTNGGLEAGIITEIFGEGGSGKSNVCMLAACSALRLGKKVVFIDSEGFSSERFLSICKADNSKLKVIRVFSLDDQEVAITKFSKIIEKDASYGLFILDSFSEFFRLERTGDNQSRVIDFQRQLSLLSSIAAKRKIPVLITNQIYQDIANGDILPFGGYVVDHIMKAIYRLERLPDGRRKMTVMKHRSVKEGNSVEFRIVQDGISCEVKNGN", - "output": "ATP binding ; ATP-dependent DNA damage sensor activity ; damaged DNA binding ; DNA recombination ; DNA repair" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MSQSICSTGLRWLWLVVVVLIIDLGSKYLILQNFALGDTVPLFPSLNLHYARNYGAAFSFLADSGGWQRWFFAGIAIGISVILAVMMYRSKATQKLNNIAYALIIGGALGNLFDRLWHGFVVDMIDFYVGDWHFATFNLADTAICVGAALIVLEGFLPSRAKKQ", - "output": "plasma membrane ; aspartic-type endopeptidase activity ; endopeptidase activity ; lipoprotein biosynthetic process via signal peptide cleavage ; proteolysis" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MGSRTVGWWLLAAAVVLAAAAADSGEAERAAEQHSERISGSAGDVLEDNPVGRLKVFIYDLPRKYNKKMVNKDPRCLNHMFAAEIFMHRFLLSSAVRTLNPKEADWFYTPVYTTCDLTPAGLPLPFKSPRVMRSAIQYISHKWPFWNRTDGADHFFVVPHDFGACFHYQEEKAIERGILPLLQRATLVQTFGQENHVCLKEGSITIPPYAPPQKMQAHLIPPDTPRSIFVYFRGLFYDTGNDPEGGYYARGARASLWENFKNNPLFDISTDHPPTYYEDMQRAVFCLCPLGWAPWSPRLVEAVVFGCIPVIIADDIVLPFADAIPWEEIGVFVEEKDVPKLDTILTSMPIDDILRKQRLLANPSMKQAMLFPQPAQPRDAFHQILNGLARKLPHPEGVYLQPSDKRLNWTAGPVGDLKAW", - "output": "Golgi membrane ; glycosyltransferase activity ; cell wall organization ; glucuronoxylan biosynthetic process ; plant-type secondary cell wall biogenesis ; protein glycosylation" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MDADELELKGHLKKLKKEELLRRKQLKESNLQKRELEYNNASKNTSIYISGLPTDKTTKEGLTEQFCKYGMIRTNRDGEPLCKLYVNDKGAFKGDALITYSKEESVTLAIEMMNESIFLGKQIRVERAQFQNKEGDNMHGKENDLKEFNGPEPPIKRLKKAKSEGEGEVIDYNDDESLAKADRTVIFANVFNIYKSYTNDDINDIQEDLLEGCEEIGQVDSISVSPNKGEATVVFKNNKVALQCCKIMTGRYFDGQKLLAFISGDENTSSTSDKNEDSEVEDDLI", - "output": "nucleus ; spliceosomal complex ; U2 snRNP ; U2-type spliceosomal complex ; RNA binding ; U2 snRNA binding ; mRNA splicing, via spliceosome ; RNA folding ; U2-type prespliceosome assembly" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MASSTPSSSATSSNAGADPNTTNLRPTTYDTWCGVAHGCTRKLGLKICGFLQRTNSLEEKSRLVSAFKERQSSKNLLSCENSDRDGRFRRTETDFSNLFARDLLPAKNGEEQTVQFLLEVVDILLNYVRKTFDRSTKVLDFHHPHQLLEGMEGFNLELSDHPESLEQILVDCRDTLKYGVRTGHPRFFNQLSTGLDIIGLAGEWLTSTANTNMFTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKFFPEVKTKGMAAVPKLVLFTSEHSHYSIKKAGAALGFGTDNVILIKCNERGKIIPADLEAKILEAKQKGYVPLYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLSGIERANSVTWNPHKMMGVLLQCSAILVKEKGILQGCNQMCAGYLFQPDKQYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEFEMVFDGEPEHTNVCFWYIPQSLRGIPDSPERREKLHRVAPKIKALMMESGTTMVGYQPQGDKANFFRMVISNPAATQSDIDFLIEEIERLGQDL", - "output": "cytoplasm ; presynaptic active zone ; glutamate decarboxylase activity ; identical protein binding ; pyridoxal phosphate binding ; gamma-aminobutyric acid biosynthetic process ; glutamate catabolic process ; neurotransmitter biosynthetic process" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MTTAVLPRVGIGVDVHPFAAGRPCWVACLEWPGETGLAGHSDGDVAAHATCDALLTASCLGDLGKVFGTDRPEYAGASGAVLLAETARLLAVGGWVIGNVSVQVIGNRPRMAARREQAQAAMSAALGASVSLSATTTDGLGLTGRGEGLAAIATALVVRA", - "output": "2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity ; metal ion binding ; isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway ; terpenoid biosynthetic process" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "METLYRVPFLVLECPNLKLKKPPWVHMPSAMTVYALVVVSYFLITGGIIYDVIVEPPSVGSMTDEHGHQRPVAFLAYRVNGQYIMEGLASSFLFTMGGLGFIILDRSNAPNIPKLNRFLLLFIGFVCVLLSFFMARVFMRMKLPGYLMG", - "output": "endoplasmic reticulum membrane ; oligosaccharyltransferase complex ; protein N-linked glycosylation" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MTICDTVDQYTIMSGDRLKIKDLLCNRLTECGWRNEVRLLCRNILLEKSANNSVSVDQLISEVTPKARTLVPDAVKKELLMKIRTILAETDEDN", - "output": "cytoplasm ; DUBm complex ; nuclear pore ; nucleoplasm ; SAGA complex ; transcription export complex 2 ; chromatin insulator sequence binding ; nuclear receptor coactivator activity ; chromatin organization ; histone deubiquitination ; mRNA export from nucleus ; positive regulation of transcription by RNA polymerase II ; protein transport ; transcription elongation by RNA polymerase II" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MLKVAINGFGRIGRNVLRAVYESGKHQQIKVVAVNELAQPEAMAHLLQYDTSHGRFGKKISHDQEHLYVHHDSSEYDPIRILHLAEIELLPWRDLEVDIVLDCTGVFGSQADGQAHIEAGAQKVLFSHPGASDLDNTIIYGVNHETLKDEHRVVSNGSCTTNCIVPIIKVLDEAFGIESGTITTIHSSMNDQQVIDAYHNDLRRTRAASQSIIPVDTKLHKGIERIFPKFSNKFEAISVRVPTVNVTAMDLSVTISTNVKVNDVNQTIVNASQCTLRDIVDYTESPLVSIDFNHDPHSAIVDGTQTRVSNGQLVKMLVWCDNEWGFANRMLDTALAMQASSQVEQ", - "output": "cytoplasm ; erythrose-4-phosphate dehydrogenase activity ; NAD binding ; pyridoxal phosphate biosynthetic process ; pyridoxine biosynthetic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MEIISLKRFILLMLATSSLLTSNIFCTDESRMPNLYSKKNYDKYSEPRGDLGWEKERSLTFEEVKDWAPKIKMNKPVVNKMPPSAANLPLRFGRNMEEERSTRAMAHLPLRLGKNREDSLSRWVPNLPQRFGRTTTAKSITKTLSNLLQQSMHSPSTNGLLYSMACQPQEIQNPGQKNLRRRGFQKIDDAELKQEK", - "output": "extracellular region ; signaling receptor binding ; negative regulation of gonadotropin secretion ; neuropeptide signaling pathway" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MALDKSVILLPLLVLVLLVLGCLGRESRAKKFQRQHMDSGSSPSSNSTYCNQMMKRRSMTHGRCKPVNTFVHEPLVDVQNVCFQEKVTCKNGQTNCFKSKSSMHITDCRLTNGSRYPNCAYRTSPKERRIIVACEGSPYVPVHFDASVEDST", - "output": "extracellular region ; lyase activity ; nucleic acid binding ; ribonuclease A activity" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MKSPAPSRPQKMALIPACIFLCFAALSVQAEETPVTPQPPDILLGPLFNDVQNAKLFPDQKTFADAVPNSDPLMILADYRMQQNQSGFDLRHFVNVNFTLPKEGEKYVPPEGQSLREHIDGLWPVLTRSTENTEKWDSLLPLPEPYVVPGGRFREVYYWDSYFTMLGLAESGHWDKVADMVANFAHEIDTYGHIPNGNRSYYLSRSQPPFFAMMVELLAQHEGDAALKQYLPQMQKEYAYWMDGVENLQAGQQEKRVVKLQDGTLLNRYWDDRDTPRPESWVEDIATAKSNPNRPATEIYRDLRSAAASGWDFSSRWMDNPQQLNTLRTTSIVPVDLNSLMFKMEKILARASKAAGDNAMANQYETLANARQKGIEKYLWNDQQGWYADYDLKSHKVRNQLTAAALFPLYVNAAAKDRANKMATATKTHLLQPGGLNTTSVKSGQQWDAPNGWAPLQWVATEGLQNYGQKEVAMDISWHFLTNVQHTYDREKKLVEKYDVSTTGTGGGGGEYPLQDGFGWTNGVTLKMLDLICPKEQPCDNVPATRPTVKSATTQPSTKEAQPTP", - "output": "periplasmic space ; alpha,alpha-trehalase activity ; cellular hyperosmotic response ; trehalose catabolic process" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MDILTLGWVSVLVLFTWSISMVVWGRNGF", - "output": "cytochrome b6f complex ; plasma membrane-derived thylakoid membrane ; electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity ; cytochrome complex assembly ; photosynthesis" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MRITVLSGSDSPEREVSLVSGRAVQAALETLGHEVTMVDPGPDLPVRLLENPPDFVWIALHGDKGENGKLQGLLDWLGLPYNGSGVTASAIAMDKVVSKRLFVAEGIPTPAYRVAEAVPQVSECQAWLAALGSPVVVKPADGGSTVGVTIAREAGHLPEAVRLALQYSPQVLIEQYIPGQEITVALLDGLVLPAIEIVPQGRDFYDYEAKYAPGGSRHLIPPNLAADVLKASVDAAYRACRAVGSTGLVRADVRVDPEGRPWVLEVNTLPGMTATSLAPEAAQAAGIDFEQLIQRIIDRSLD", - "output": "cytoplasm ; ATP binding ; D-alanine-D-alanine ligase activity ; metal ion binding ; cell wall organization ; peptidoglycan biosynthetic process ; regulation of cell shape" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MVTKEQRRQKIKARVRGKISGTQERPRLTVFRSNKQIYAQLIDDIAGRTLASASSLKLEMTGSKKEIAAKVGDEIAKAATEAGISTVVFDRNGYLFHGRIKELADAARKGGLKF", - "output": "cytoplasm ; ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MIFKDYDFLQNYDLKNFGEKVKIYKELLSKFNRIHNLTHLKNIDENIFDSIKILDFYDFSKAKNIADIGSGAGFPAVFLAFLLQSNFHLFEPNPKKTAFLRTLKIECELSNLHIYKEKVQEYKNTFKADIITSRALMDIKPLLEICTNLKDENTVFILWKGSEIYQELENIKDYEIFENNLRKYCIVK", - "output": "cytoplasm ; rRNA (guanine-N7-)-methyltransferase activity" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MATNLRGVMAALLTPFDQQQALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIDSADGLPMVVYNIPALSGVKLSLDQINTLVTLPGVGALKQTSGDLYQMEQIRREHPDLVLYNGYDEIFASGLLAGADGGIGSTYNIMGWRYQGIVKALKEGDIQTAQKLQTECNKVIDLLIKTGVFRGLKTVLHYMDVVSVPLCRKPFGPVDEKYLPELKALAQQLMQERG", - "output": "cytoplasm ; N-acetylneuraminate lyase activity ; carbohydrate metabolic process ; N-acetylneuraminate catabolic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MPQHDQLHRYLFENFAVRGELVTVSETLQQILENHDYPQPVKNVLAELLVATSLLTATLKFDGDITVQLQGDGPMSLAVINGNNKQQMRGVARVQGEIPENADLKTLVGNGYVVITITPSEGERYQGVVGLEGDTLAACLEDYFMRSEQLPTRLFIRTGDVDGKPAAGGMLLQIMPAQNAQQDDFDHLATLTETIKTEELLTLPANEVLWRLYHEEEVTVYDPQDVEFKCTCSRERCADALKTLPDEEVDSILAEEGEIDMHCDYCGNHYLFNAMDIAEIRNNASPADPQVH", - "output": "cytoplasm ; unfolded protein binding ; protein folding" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MTLLNVCGLSHHYAHGGFSGKHQHQAVLNNVSLTLKSGETVALLGRSGCGKSTLARLLVGLESPSQGNISWHGESLAKLNRAQRKAFRRDIQMVFQDSISAVNPRKTVREILREPMRHLLSLKKSEQLARASEMLKAVDLDDSVLDKRPPQLSGGQLQLVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLRLVERFCQRVMVMDNGQIAETQAVGDKLTFSSDAGRVLQNAVLPAFPVRRRTSEKV", - "output": "plasma membrane ; ABC-type nickel transporter activity ; ATP binding ; ATP hydrolysis activity ; nickel cation binding" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MHTTDTETFEEQFAIEQRLVDSVVASFDSTTDPRLKELMQSLTRHLHAFIREVRLSEDEWSNAIAFLTAVGNITDDRRQEFILLSDVLGVSMQTIAVSNPAYEDATESTVFGPFFVEDAPEVTLGGDIAGGATGQPCWIEGTVTDTAGNPVPEARIEVWQNDEDGFYDVQYSDGRVSGRAHLFSDAHGRYRFWGMTPVPYPIPSDGPVGKMLAATNRSPMRVAHLHFMVTADGLRTLVTHIFVAGDPQLERGDSVFGVKDSLIKDFVEQPPGTPTPDGRHIGDRNWARCEFDIVLAPEQI", - "output": "4-hydroxycatechol 1,2-dioxygenase activity ; catechol 1,2-dioxygenase activity ; ferric iron binding ; hydroxyquinol 1,2-dioxygenase activity ; aromatic compound catabolic process ; catechol-containing compound metabolic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MLTLKIAVYIVVAFFVAIFVFGFLSNDPARNPGRRDLE", - "output": "photosystem II reaction center ; plasma membrane-derived thylakoid membrane ; photosynthesis" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGVGKLASVPAGGAVAVSAAPGSAAPAAGSAPAAAEEKKDEKKEESEESDDDMGFGLFD", - "output": "cytoplasm ; cytosol ; cytosolic large ribosomal subunit ; postsynapse ; presynapse ; ribosome ; synapse ; iron ion binding ; ribonucleoprotein complex binding ; structural constituent of ribosome ; cytoplasmic translation ; cytoplasmic translational elongation ; translation at postsynapse ; translation at presynapse" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MVKLSKEAKQRLQQLFKGGQFAIRWGFIPLVIYLGFKRGADPGMPEPTVLSLLWG", - "output": "mitochondrial outer membrane translocase complex ; positive regulation of mitophagy in response to mitochondrial depolarization ; positive regulation of protein targeting to mitochondrion ; protein import into mitochondrial matrix ; regulation of protein stability" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MLSLTMLLLERVGLIIILAYVLMNIPYFKNLMNRRRTWKARWQLCIIFSLFALMSNLTGIVIDHQHSLSGSVYFRLDDDVSLANTRVLTIGVAGLVGGPFVGLFVGVISGIFRVYMGGADAQVYLISSIFIGIIAGYFGLQAQRRKRYPSIAKSAMIGIVMEMIQMLSILTFSHDKAYAVDLISLIALPMIIVNSVGTAIFMSIIISTLKQEEQMKAVQTHDVLQLMNQTLPYFKEGLNRESAQQIAMIIKNLMKVSAVAITSKNEILSHVGAGSDHHIPTNEILTSLSKDVLKSGKLKEVHTKEEIGCSHPNCPLRAAIVIPLEMHGSIVGTLKMYFTNPNDLTFVERQLAEGLANIFSSQIELGEAETQSKLLKDAEIKSLQAQVSPHFFFNSINTISALVRINSEKARELLLELSYFFRANLQGSKQHTITLDKELSQVRAYLSLEQARYPGRFNININVEDKYRDVLVPPFLIQILVENAIKHAFTNRKQGNDIDVSVIKETATHVRIIVQDNGQGISKDKMHLLGETSVESESGTGSALENLNLRLKGLFGKSAALQFESTSSGTTFWCVLPYERQEEE", - "output": "plasma membrane ; ATP binding ; hydrolase activity ; phosphorelay sensor kinase activity ; cell wall organization" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MASLLCCGPKLAACGIVLSAWGVIMLIMLGIFFNVHSAVLIEDVPFTEKDFENGPQNIYNLYEQVSYNCFIAAGLYLLLGGFSFCQVRLNKRKEYMVR", - "output": "clathrin-coated vesicle membrane ; endomembrane system ; membrane ; vacuolar proton-transporting V-type ATPase, V0 domain ; RNA endonuclease activity ; endosomal lumen acidification ; proton transmembrane transport ; receptor-mediated endocytosis ; receptor-mediated endocytosis of virus by host cell" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MQQHSSKTAYVYSDKLLQYRFHDQHPFNQMRLKLTTELLLNANLLSPEQIVQPRIATDDELMLIHKYDYVEAIKHASHGIISEDEAKKYGLNDEENSQFKHMHRHSATIVGGALTLADLIMSGKVLNGCHLGGGLHHAQPGRASGFCIYNDIAITAQYLAKEYNQRVLIIDTDAHHGDGTQWSFYADNHVTTYSIHETGKFLFPGSGHYTERGEDIGYGHTVNVPLEPYTEDASFLECFKLTVEPVVKSFKPDIILSVNGVDIHYRDPLTHLNCTLHSLYEIPYFVKYLADSYTNGKVIMFGGGGYNIWRVVPRAWSHVFLSLIDQPIQSGYLPLEWINKWKHYSSELLPKRWEDRLNDYTYVPRTKEISEKNKKLALHIASWYESTRQ", - "output": "acetoin catabolic process" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "NLVQFELLIMKVAKRSGLLSYSA", - "output": "extracellular region ; metal ion binding ; phospholipase A2 activity ; toxin activity ; lipid catabolic process" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MSKQKKFEENLAELETIVQSLENGEIALEDAITAFQKGMVLSKELQATLDKAEKTLVKVMQEDGTESDFE", - "output": "cytoplasm ; exodeoxyribonuclease VII complex ; exodeoxyribonuclease VII activity ; DNA catabolic process" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MSGSSMGRLFTVTSFGESHGPGIGCVVDGCPPGLALSEADIQLELDRRKPGTSRHVTQRREPDTVEILSGVYEGKTTGTPIALLIRNTDQRSKDYGNIADTFRPGHADYCYWHKYGTRDPRGGGRSSARETAVRVAAGAIAKKWLNEKYGIVIRGHMTQIGEVAIPFKSWEHVGGNPFFSADPDIVPRLEEYMDSIRKSLDSIGARLRVVADNVPVGWGEPVFDRLDADIAYAMMSINAVKGVEIGAGFGCVTQKGSEHGDELTPRGFASNHAGGVLGGISTGQQIDVSIAIKPTSSIAQPRRSINKQGEAVTMETHGRHDPCVGIRATPIAEAMLALVLIDHALRHRAQCGDVRVETPRIAGHIG", - "output": "chorismate synthase activity ; amino acid biosynthetic process ; aromatic amino acid family biosynthetic process ; chorismate biosynthetic process" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MLKPSIDTLLDKVPSKYSLVILQAKRAHELEAGEKATQDFKSVKSTLRALEEIESGNVVIHPDPSAKRASVRARIEAERLAKEEEERKIKEQIAKEKEDGEKI", - "output": "DNA-directed RNA polymerase complex ; DNA binding ; DNA-directed 5'-3' RNA polymerase activity ; DNA-templated transcription" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MIQQAIAKVLEGEDLTRAEAASVMTEIADGGATPAQSGAFLAALRMKGETVDEIAGAADVMRQRADRVRVDRDVFIDTCGTGGDGRHTFNISTTAAFVAAGAGVCVAKHGNRAVSSRSGSADVLAALGVNVDADKETVERCIEEVGIGFLFAVRLHPAFKAIAGVRRELGVRTIFNLLGPLANPAGARHQVLGVYEARWVPVLGGVLAALGAAHAFVVHGEGLDEIAVTGMTHVCEVRDGQVERYTIRPEDLGLPRRDAAELVGGDAAANARIVTDVLEGQAGGPRDAVLANAAAALVCAGAAKDLRDGVARAARSIDSGAAREKLRQLVAATTVPA", - "output": "anthranilate phosphoribosyltransferase activity ; magnesium ion binding ; tryptophan biosynthetic process" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MQVELYTCCFLCLLPFSLSATRKYYLGAVELSWDYMQSDLLSALHADTSFSSRVPGSLPLTTSVTYRKTVFVEFTDDLFNIAKPRPPWMGLLGPTIQAEVYDTVVIVLKNMASHPVSLHAVGVSYWKASEGAEYEDQTSQKEKEDDNVIPGESHTYVWQVLKENGPMASDPPCLTYSYFSHVDLVKDLNSGLIGALLVCKEGSLAKERTQTLQEFVLLFAVFDEGKSWHSETNASLTQAEAQHELHTINGYVNRSLPGLTVCHKRSVYWHVIGMGTTPEVHSIFLEGHTFLVRNHRQASLEISPITFLTAQTFLMDLGQFLLFCHIPSHQHDGMEAYVKVDSCPEEPQLRMKNNEDKDYDDGLYDSDMDVVSFDDDSSSPFIQIRSVAKKHPKTWVHYIAAEEEDWDYAPSGPTPNDRSHKNLYLNNGPQRIGKKYKKVRFVAYTDETFKTREAIQYESGILGPLLYGEVGDTLLIIFKNQASRPYNIYPHGINYVTPLHTGRLPKGVKHLKDMPILPGEIFKYKWTVTVEDGPTKSDPRCLTRYYSSFINLERDLASGLIGPLLICYKESVDQRGNQMMSDKRNVILFSVFDENRSWYLTENMQRFLPNADVVQPHDPEFQLSNIMHSINGYVFDNLQLSVCLHEVAYWYILSVGAQTDFLSVFFSGYTFKHKMVYEDTLTLFPFSGETVFMSMENPGLWVLGCHNSDFRNRGMTALLKVSSCNRNIDDYYEDTYEDIPTPLLNENNVIKPRSFSQNSRHPSTKEKQLKATTTPENDIEKIDLQSGERTQLIKAQSVSSSDLLMLLGQNPTPRGLFLSDLREATDRADDHSRGAIERNKGPPEVASLRPELRHSEDREFTPEPELQLRLNENLGTNTTVELKKLDLKISSSSDSLMTSPTIPSDKLAAATEKTGSLGPPNMSVHFNSHLGTIVFGNNSSHLIQSGVPLELSEEDNDSKLLEAPLMNIQESSLRENVLSMESNRLFKEERIRGPASLIKDNALFKVNISSVKTNRAPVNLTTNRKTRVAIPTLLIENSTSVWQDIMLERNTEFKEVTSLIHNETFMDRNTTALGLNHVSNKTTLSKNVEMAHQKKEDPVPLRAENPDLSSSKIPFLPDWIKTHGKNSLSSEQRPSPKQLTSLGSEKSVKDQNFLSEEKVVVGEDEFTKDTELQEIFPNNKSIFFANLANVQENDTYNQEKKSPEEIERKEKLTQENVALPQAHTMIGTKNFLKNLFLLSTKQNVAGLEEQPYTPILQDTRSLNDSPHSEGIHMANFSKIREEANLEGLGNQTNQMVERFPSTTRMSSNASQHVITQRGKRSLKQPRLSQGEIKFERKVIANDTSTQWSKNMNYLAQGTLTQIEYNEKEKRAITQSPLSDCSMRNHVTIQMNDSALPVAKESASPSVRHTDLTKIPSQHNSSHLPASACNYTFRERTSGVQEGSHFLQEAKRNNLSLAFVTLGITEGQGKFSSLGKSATNQPMYKKLENTVLLQPGLSETSDKVELLSQVHVDQEDSFPTKTSNDSPGHLDLMGKIFLQKTQGPVKMNKTNSPGKVPFLKWATESSEKIPSKLLGVLAWDNHYDTQIPSEEWKSQKKSQTNTAFKRKDTILPLGPCENNDSTAAINEGQDKPQREAMWAKQGEPGRLCSQNPPVSKHHQREITVTTLQPEEDKFEYDDTFSIEMKREDFDIYGDYENQGLRSFQKKTRHYFIAAVERLWDYGMSRSPHILRNRAQSGDVQQFKKVVFQEFTDGSFTQPLYRGELNEHLGLLGPYIRAEVEDNIVVTFKNQASRPYSFYSSLISYDEDEGQGAEPRRKFVNPNETKIYFWKVQHHMAPTKDEFDCKAWAYFSDVDLEKDVHSGLIGPLLICRSNTLNPAHGRQVTVQEFALVFTIFDETKSWYFTENLERNCRAPCNVQKEDPTLKENFRFHAINGYVKDTLPGLVMAQDQKVRWYLLSMGSNENIHSIHFSGHVFTVRKKEEYKMAVYNLYPGVFETVEMLPSQVGIWRIECLIGEHLQAGMSTLFLVYSKKCQTPLGMASGHIRDFQITASGQYGQWAPKLARLHYSGSINAWSTKDPFSWIKVDLLAPMIIHGIMTQGARQKFSSLYVSQFIIMYSLDGNKWHSYRGNSTGTLMVFFGNVDSSGIKHNIFNPPIIAQYIRLHPTHYSIRSTLRMELLGCDFNSCSMPLGMESKAISDAQITASSYLSSMLATWSPSQARLHLQGRTNAWRPQANNPKEWLQVDFRKTMKVTGITTQGVKSLLISMYVKEFLISSSQDGHNWTLFLQNGKVKVFQGNRDSSTPVRNRLEPPLVARYVRLHPQSWAHHIALRLEVLGCDTQQPA", - "output": "extracellular space ; copper ion binding ; oxidoreductase activity ; acute-phase response ; blood coagulation, intrinsic pathway" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MKTLLLTLVVVTIVCLDLGDSLRCYMGPKTPRTCPPGENLCFTKTWCDPRCSLLGKLVKLGCAATCPIPKSYEDVTCCSTDNCNRFPKWERSRPRPRGLLSSIMDHP", - "output": "extracellular region ; acetylcholine receptor inhibitor activity ; ion channel regulator activity ; toxin activity" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MRVKIVSKPTSQLNNIIEKIKNISTKLGFEVVDKDFDYVIAVGGDGTLLRAVKQNKPVIAVKAGRRGLLMDVPVDKFEEALLRLKKGDYEEEEYMLLEMIYNDKVELGFNEVGILYDRPEAIKVGISFDTERVSVEGDGVLVSTPQGSSGWGMSATNSLLYKDLSAIEIIFVNPIFYYLRSVVIPPKPLTLRLEDKGYPQTARAVVDGEVVTLIKTNQEITVRVSQRKAKILRFFKLDLIGEVLHAYHI", - "output": "cytoplasm ; ATP binding ; metal ion binding ; NAD+ kinase activity ; NAD metabolic process ; NADP biosynthetic process ; phosphorylation" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MAGSKSPKGEFAGRKLLLKRKASRWHHYKYVNKALSLKLKADPLEGAPMGRGIVVEKVGLEAKQPNSAIRKCVRVQLIKNGRQVTAFAPGNHAINFIDEHDEVVIEGIGGPSGQAKGDIPGVRYKVVMVGKNSIRELVRGRQEKVKR", - "output": "small ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MDSEDDPLLQDVWLEEEQPEDEACRGIPGPGLQSGAQGCWRRWTLPSRPPTLGFWSTLGWAFTNPCCAGLVLFLGCSIPMVLSAFMFLYYPPLDIDISYNAFEIRNHEASQRFDALALALKSQFGSWGRNRRDLADFTSETLQRLISEQLQQLHLGNHSRPASRAPRSAPRDTVATQTSAANSSERRRREAPSPEGQVTNQSRARRGASRWDYSRTYVSANTQTHAHWRIELIFLARGDAERNIFTSERLVTIHEIERKIMDHPGFREFCWKPHEVLKDLPLGSYSYCSPPSSLMTYFFPTERGGKIYYDGMGQDLADIRGSLELAMTHPEFYWYVDEGLSVDNLKSSLLRSEILFGAPLPNYYSVDDRWEEQRAKFQSFVVTYVAMLAKQSTSKVQVLYGGTDLFDYEVRRTFNNDMLLAFISSSCIAALVYILTSCSVFLSFFGIASIGLSCLVALFLYHVVFGIQYLGILNGVAAFVIVGIGVDDVFVFINTYRQATHLEDPQLRMIHTIQTAGKATFFTSLTTAAAYAANVFSQIPAVHDFGLFMSLIVTCCWLAVLFTMPAALGLWSLYMAPLESSCQNSCHQKCGRKSSLHFPGDLFTAPERAGGGPAQGPLPYLDDDIPLLNVEDEPASLELGDVSLVSVHCEGLQPTPDANSRGQLLAQLQELLHHWVLWAAVKSRWVIVGLFASILILSLVFASRLRPASRAPLLFRPDTNIQVLLDLKYNLSAEGISCITCSGLFQEKPHSLQNNVRTSLEKKKRGSGVSWASRTETTAQESMSTVYISKVKSKGHPAVYRLSLNASLPAPWQAVSPGDGEVPSFQVYRAPFGDFTKKLTACMSTVGLLQAASPSRKWMVTALACDARRGWKFDFSFYVATKEQQHTRKLYFAQSHKPPFHGRLCVAPPGCLLSSSPDGPTKGFFYVPSDKVPKARISATFGFNPCVNTGCGKPAVRPLVDTGAMVFVVFGIIGLNRTQQMDNHVIGDPGSVIYDSSFDLFKEIGHLCRLCKAIAGNSELVKPGGAQCLPSGYSISSFLQMLHPECKELPEPNLLPGQLSHGAVGVKEGRVQWISMAFESTTYKGKSSFQTYSDYLRWESFLRQQLQTFPEGSALHRGFQTCEHWKQIFMEIIGVQSALYGLVLSLLICVAAVAVFTTHVLLLLPVLLSILGIVCLVVTIMYWSGWEMGAVEAISLSILVGSSVDYCVHLVEGYLLAGENLPPQLSQDPSSQRQWRTLEAVRHVGVAIVSSALTTVIATVPLFFCIIAPFAKFGKIVALNTGVSILYTLTVSTALLGIMAPGSFTRTRTSFLKALGAVLLAGALGLGACLVLLRSGYKIPLPSGATL", - "output": "cytoplasm ; cytoplasmic vesicle membrane ; endoplasmic reticulum membrane ; nuclear membrane ; cell differentiation ; cholesterol metabolic process ; negative regulation of neuron differentiation ; positive regulation of lipid metabolic process ; positive regulation of neural precursor cell proliferation" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MSFNTFGHLFRVTTFGESHGVAIGCVVDGCPPLIPLTEADIQGDLDRRRPGQSRFTTQRQEADQVKILSGVMVHPETGVQVTTGTPIALLIENTDQRSKDYSDIQNKYRPGHADFTYEAKYGIRDYRGGGRSSARETATRVAAGAIARKVIAGMTVRGALVQIGPHKIDRDKWDWDEIGNNPFFCPDKDKAAFYADYLDGIRKSGSSIGAVVEIVAEGVPAGLGAPIYAKLDGDLAAALMSINAVKGVEIGDGFASAELTGEQNADEMRTGNHGPAFLSNHAGGILGGISTGQPVVARFAVKPTSSILTPRKTVDRTGHDTEILTKGRHDPCVGIRAVPVGEAMVACVLADHLLRHRGQVGG", - "output": "chorismate synthase activity ; amino acid biosynthetic process ; aromatic amino acid family biosynthetic process ; chorismate biosynthetic process" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MTRPLEQAVAAIVCTFQEYAGRCGDKYKICQSELKELLQKELPTWTPSEFRECDYNKFMSVLDTNKDCEVDFGEYVRSLASLCLYCHEYFKECPPEPPCPQ", - "output": "collagen-containing extracellular matrix ; cytosol ; Golgi apparatus ; plasma membrane ; transition metal ion binding" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MADLDDIKDGKDFHTDKPQTNTLFSLKGCGALDWGMQSRLARIFNPRTRKTVMLAFDHGYFQGPTTGLERIDINIAPLFEYADVLMCTRGILRSVVPPAINKPVVLRASGANSILTELSNEAVAVAMDDAVRLNSCAAAAQVYIGSEHEHQSIKNIIQLIDAGLRVGMPIMAVTGVGKDMARDQRYFSLATRIAAEMGAQIIKTYYVDKGFERIAAGCPVPIVIAGGKKLPEREALEMCYQAIDQGASGVDMGRNIFQSEDPVAMIKAVHAVVHHNETAERAYELFLSEKG", - "output": "cytoplasm ; acyltransferase activity, transferring groups other than amino-acyl groups ; fructose-bisphosphate aldolase activity" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MEVMNLIEQPIKVTEWQQTYTYDSGIHSGVNTCVPSVSSKGIMDEDDACGRQYTLKKTTTYTQGVPQNQGDLEYQMSTTARAKRVREAMCPGVSGEDSSLLLATQVEGQTTNLQRLAEPSQLLKSAIVHLINYQDDAELATRALPELTKLLNDEDPVVVTKAAMIVNQLSKKEASRRALMGSPQLVAAVVRTMQNTSDLDTARCTTSILHNLSHHREGLLAIFKSGGIPALVRMLSSPVESVLFYAITTLHNLLLYQEGAKMAVRLADGLQKMVPLLNKNNPKFLAITTDCLQLLAYGNQESKLIILANGGPQGLVQIMRNYSYEKLLWTTSRVLKVLSVCPSNKPAIVEAGGMQALGKHLTSNSPRLVQNCLWTLRNLSDVATKQEGLESVLKILVNQLSVDDVNVLTCATGTLSNLTCNNSKNKTLVTQNSGVEALIHAILRAGDKDDITEPAVCALRHLTSRHPEAEMAQNSVRLNYGIPAIVKLLNQPNQWPLVKATIGLIRNLALCPANHAPLQEAAVIPRLVQLLVKAHQDAQRHVAAGTQQPYTDGVRMEEIVEGCTGALHILARDPMNRMEIFRLNTIPLFVQLLYSSVENIQRVAAGVLCELAQDKEAADAIDAEGASAPLMELLHSRNEGTATYAAAVLFRISEDKNPDYRKRVSVELTNSLFKHDPAAWEAAQSMIPINEPYADDMDATYRPMYSSDVPLDPLDMHMDLDGDYPMDTYSDGLRPPYPTADHMLA", - "output": "actin cytoskeleton ; adherens junction ; apicolateral plasma membrane ; catenin complex ; cell-cell junction ; cornified envelope ; cytoplasm ; cytoplasmic side of plasma membrane ; cytosol ; desmosome ; fascia adherens ; gamma-catenin-TCF7L2 complex ; intercalated disc ; intermediate filament ; lateral plasma membrane ; nucleus ; plasma membrane ; protein-DNA complex ; Z disc ; alpha-catenin binding ; cadherin binding ; cell adhesion molecule binding ; cytoskeletal protein-membrane anchor activity ; DNA-binding transcription factor binding ; protein kinase binding ; protein phosphatase binding ; protein tyrosine kinase binding ; protein-containing complex binding ; transcription coactivator activity ; bundle of His cell-Purkinje myocyte adhesion involved in cell communication ; canonical Wnt signaling pathway ; cell adhesion ; cell migration ; cell-cell adhesion ; cellular response to indole-3-methanol ; desmosome assembly ; detection of mechanical stimulus ; negative regulation of blood vessel endothelial cell migration ; positive regulation of angiogenesis ; positive regulation of cell-matrix adhesion ; positive regulation of DNA-binding transcription factor activity ; positive regulation of protein import into nucleus ; positive regulation of transcription by RNA polymerase II ; protein localization to plasma membrane ; regulation of cell population proliferation ; regulation of heart rate by cardiac conduction ; regulation of ventricular cardiac muscle cell action potential ; skin development" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MEKKILEQLEFEKVKEQFWPYLQTEQGQLELDLLEPIANKDKIQAYFTELEEMAAIFVEHHHFALGGLSDVSESMQRLDLEADLSIQELLVIKKLLQVSAEVCRFYADLENVDLVALKALFEKIESFPSLQGSLQAINDAGFVEGFASPELESIRRQISNKEHASRQLLQDILKKQAAYLSESLIASRNGRSVLPVKNTYRHKVAGVVHDMSASGSTVYIEPRALVSLNEELTQLQADERHEIGRILHELSEQLRPHSRSLRNNAWLLGHLDLVRAKYLYMQAKQATVPVISDDKSLQLLNARHPLIQNPVANDLHFANDLAVIVITGPNTGGKTIMLKTLGLAQVMAQSGLPILADKGSRVAVFNGIYADIGDEQSIEQSLSTFSSHMTHIVEILNQADSDSLILFDELGAGTDPQEGASLAMAILEQLRLTNIKTMATTHYPELKAYGIETAYVENASMAFDNVSLKPTYRFMQGVPGRSNAFDIARRLGLAEHIVKEAQAMTATDHDVNRIIEQLEQQTLESRKRLEHIKEVEQDNLKFNRAVKKLYNEFSHAKDKELEKAALEAREIVDIALAESDSILSQLHEKAELKPHEIIEAKHRLKQLAPEQSLSQNKVLKQAKKWRAPRVGDDIIVTAYGQRGTLLAQLKDKRWEAQVGLIKLTLKEDEFSLVKLKEEAQQPKKRAVKVVKKAATGKGPRARLDLRGKRYEEAMQELDAFIDQALLNNMSQVDIIHGIGTGVIREAVGKYLRRNKHVKSFGYAPQNAGGSGCTIANLG", - "output": "ATP binding ; ATP hydrolysis activity ; ATP-dependent DNA damage sensor activity ; endonuclease activity ; mismatched DNA binding ; mismatch repair ; negative regulation of DNA recombination" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MIVGIGSDLCDIRRIERSLERFGERFTQRVFTPGERARSDRRAARAPSYARRFAAKEACAKALGTGLSQGVFWRDMEVVNLPSGAPTLRLTGGAAARLAALVPPGHRARLHVSLTDDPPLAQAFVVIEALRDESC", - "output": "cytoplasm ; holo- synthase activity ; magnesium ion binding ; fatty acid biosynthetic process" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MNISSFSDNLTKILGKYEDLSEKLSSGIGGEEFVKASKEYADLEDIVQKIKEYNKAKAELEEANNFKQEPSLDKATLEMIEEEIRNLEDSLPTLERSVKIALLPKDEADSKSAIIEIRAGTGGEEAALFAAKLFNMYQRYAELKGWRFEILSIDETGIGGYKEVSASIKGKDVFSKLKFESGVHRVQRVPETESQGRIHTSAATVAVLPEVEDVDIKLEEKDLRIDTYRASGAGGQHVNTTDSAVRITHIPTGITVALQDEKSQHKNKAKALKILRARIYEEERRKKDQERANNRRKQIGSGDRSERIRTYNFPQGRVSDHRINLTLYKIDEVINGQLDEFIEALIANDEAKKLSDI", - "output": "cytoplasm ; translation release factor activity, codon specific" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MKRDKRLEIIKEIVTNNKISTQEELQSLLLERGVEVTQATLSRDIRKLNIIKKRDKGESFYSFLTSGNSKINSDLQLYFYNFVISAKSVGALVVIRTKLGEADVLANALDDERDSRTDILGTIAGADTLLVICASEKAANILTAEIKYILLG", - "output": "cytoplasm ; arginine binding ; DNA binding ; DNA-binding transcription factor activity ; arginine biosynthetic process ; protein complex oligomerization" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MNKTTRVMPAHKHIALVAHDNYKPELLRWVKENKDALQGHFLYATGTTGRILSKETGLAIKSLLSGPMGGDQQLGALISEGKIDMMIFFWDPLNAVPHDPDVKALLRIATVWNVPVAMNRASAKFMISAPQMEEEVSIEIPDYDAYLAERV", - "output": "methylglyoxal synthase activity ; methylglyoxal biosynthetic process" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MYIQSLALTSYRNYEHTELQFDNKVNVMIGENAQGKTNLMEAIYVLSMAKSHRTSNDKELIRWDQDYAKIEGRVIKKNGPLPMQLVISKKGKKGKVNHIEQQKLSHYVGALNTIMFAPEDLSLVKGSPQIRRRFLDMEIGQVSAVYLHDLSLYQKILSQRNHYLKQLQTRKQTDQAMLEVLTEQLIDAAAKVVKRRLTFTKQLEKWAQPLHFGISRELETLTLQYHTAIEVSEASDLSKIKNSYEESFQKLRDREIDRGVTLWGPHRDDLLFFVNGRDVQTYGSQGQQRTTALSLKLAEIDLIHEEIGEYPILLLDDVLSELDDYRQSHLLHTIQGRVQTFVTTTSVEGIDHATLKEAEIFRVASGKVID", - "output": "cytoplasm ; ATP binding ; single-stranded DNA binding ; DNA repair ; DNA replication ; SOS response" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MIIHPKVRGFICTTTHPLGCERNVLEQIAATRARGVRNDGPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEETITVMGGQDWELWIDALEGAGVLADGARSVAFSYIGTEITWPIYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVTQASAAIPVMPLYISMVYKIMKEKGLHEGTIEQLDRLFRERLYRQDGQPAEVDEQNRLRLDDWELRDDVQDACKALWPQVTTENLFELTDYAGYKHEFLKLFGFGRTDVDYDADVATDVAFDCIELA", - "output": "enoyl- reductase (NADH) activity ; enoyl- reductase activity ; NAD binding ; trans-2-enoyl-CoA reductase (NAD+) activity ; fatty acid biosynthetic process" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MPNAIVAAEQYREIFLNQHPIMDVRAPIEFTRGAFPNSTNLPLMLDSEREKVGTCYKQSGQQAAIALGHSLVNGPIKQQRIEAWASYVKANPKAYLYCFRGGLRSQLTQQWLKEAGVEVPYIQGGYKAMRQYLIGVIEAAPAQQPLLSLSGMTGCGKTDFLLLRKEAVDLEGIANHRGSSFGKNIDPQPTQINFENQLAIALLQHQTSGVACLLLEDESFLIGRSALPQTFYNAMQAANVLVLEESDDVRLERLRDEYVHKMYSGFCERLGAEAGFAAFSDYLLQSLVSIRKRLGGKQHQELQDLMQQALDQQINQNDTSLHLVWINLLLHKYYDPMYLYQLQNKSERVLFKGSHQAMHEWLDSYQTR", - "output": "transferase activity, transferring alkyl or aryl (other than methyl) groups ; tRNA 2-selenouridine synthase activity ; tRNA wobble uridine modification" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MELNAKPRKSQEKLAEGLIPAVAYNKDNNISFALDRKAFDRAFRQQSTTGLFDITVEGGETFPALVKTVQMDKRRRTPIHVDFYMVTYGEPIEVSVPVHTTGKSQGEIMGGLVDIVLHNLSIVAPGPRRIPQELTVDVSRLNIGDHITAGDVKLPEGCTLAVAADSVVISVLPPRMTADEAAAETQAAQVAGLVAAGELSEEAAAAVLEGDASIEEIKAEAHAAEGTQAEGSTEEGQQQ", - "output": "ribonucleoprotein complex ; ribosome ; 5S rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MALCLKQVFAKDKTFRPRKRFEPGTQRFELYKKAQASLKSGLDLRSVVRLPPGENIDDWIAVHVVDFFNRINLIYGTMAERCSETSCPVMAGGPRYEYRWQDERQYRRPAKLSAPRYMALLMDWIEGLINDEEVFPTRVGVPFPKNFQQVCTKILTRLFRVFVHVYIHHFDSILSMGAEAHVNTCYKHFYYFIREFSLVDQRELEPLREMTERICH", - "output": "cytoplasm ; nucleus ; metal ion binding ; protein kinase activator activity ; positive regulation of protein phosphorylation ; signal transduction" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MDNAGKEREAVQLMAEAEKRVKASHSFLRGLFGGNTRIEEACEMYTRAANMFKMAKNWSAAGNAFCQAAKLHMQLQSKHDSATSFVDAGNAYKKADPQEAINCLNAAIDIYTDMGRFTIAAKHHITIAEIYETELVDIEKAIAHYEQSADYYKGEESNSSANKCLLKVAAYAAQLEQYQKAIEIYEQVGANTMDNPLLKYSAKDYFFKAALCHFIVDELNAKLALEKYEEMFPAFTDSRECKLLKKLLEAHEEQNSEAYTEAVKEFDSISRLDQWLTTMLLRIKKSIQGDGEGDGDLK", - "output": "extracellular exosome ; glutamatergic synapse ; synaptobrevin 2-SNAP-25-syntaxin-1a complex ; soluble NSF attachment protein activity ; syntaxin binding ; intracellular protein transport ; regulation of synaptic vesicle priming ; SNARE complex disassembly ; synaptic transmission, glutamatergic" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MLSLKLPRLFSIDQIPQVFHEQGILFGYRHPQSSATACILSLFQMTNETLNIWTHLLPFWFFAWRFVTALYMTDIKNDSYSWPMLVYMCTSCVYPLVSSCAHTFSSMSKNARHICYFLDYGAVNLFSLGSAIAYSAYTFPDALMCTTFHDYYVALAVLNTILSTGLSCYSRFLEIQKPRLCKVIRVLAFAYPYTWDSLPIFYRLFLFPGESAQNEATSYHQKHMIMTLLASFLYSAHLPERLAPGRFDYIGHSHQLFHVCVILATHMQMEAILLDKTLRKEWLLATSKPFSFSQIAGAILLCIIFSLSNIIYFSAALYRIPKPELHKKET", - "output": "plasma membrane ; signaling receptor activity ; steroid binding ; oogenesis" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MEGWQRAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSNLKGALQPFTPLLLRYSGRGEVKTLRSAEAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELFFDYLNCIQALAGTTGSPEPALRRFELALLGHLGYGVNFTHCAGSGERVDDTMTYRYREEKGFFASVVIDNNTFTGRHLKALEAREFPDVDTLRAAKRFTRMALKPYLGGKPLKSRELFRQFMPKRTVKTKKD", - "output": "DNA recombination ; DNA repair" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MSNLRTLVFFATPPHDCSYLPDREATTMFVDPRAHIDKKLYSQLTALGFRRSGSHYYRPHCESCNACVPVRLQVGQFEPDRNQRRVLRKNADLDCKLVPAAFSERYYRLYAHYIEERHRDGDMYPPSREQFTSFLVEGATDSWFLEMSLDGELVGLAAVDLLDDGLSAIYTVFAPELEHRSLGTFAVLWQIEEAKRRELPHLYLGYWIKECRKMNYKTRFQPIEALRDGHWREMSTD", - "output": "cytoplasm ; arginyltransferase activity ; leucyltransferase activity ; ubiquitin-dependent protein catabolic process via the N-end rule pathway" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MIDKSVFIHPTAIVEDGAVIGANAHIGPFCIVGPQVEIGEGTVLKSHVVVNGQTKIGRDNEIYQFASIGEVNQDLKYAGEPTRVEIGDRNRIRESVTIHRGTVQGGGLTKVGSDNLLMINAHVAHDCTVGNRCILANNATLAGHVSVDDFAIIGGMTAVHQFCIIGAHVMVGGCSGVAQDVPPYVIAQGNHATPFGVNIEGLKRRGFSREGLVAIRNAYKLLYRSGKTLDEAKLEIAELAEKHPEVKAFTEFFERSTRGPIR", - "output": "cytoplasm ; acyl--UDP-N-acetylglucosamine O-acyltransferase activity ; lipid A biosynthetic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MNIELALTLVSLVLVVSAGPLVVVLLSARGGNL", - "output": "chloroplast thylakoid membrane ; photosystem II ; photosynthesis" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MDSVSVNQILYPEVHLDSPIVTNKLVSILEYARIRHNYQLLDTTLVRNIKERISEGFSNQMIINCIEIGSIINQTLLSYPKHNHVIYPNCNKLLFHAQDRVISLRLRNIFKRGNSIYSKITDGVKKCLNDINLNIGLGGALDKTIGTKIDEAGIIMQSSQWFEPFLLWFTIKTEMRSVIKSSTHNCRKRRQNPVFVKGESLNVLVSRDLVCIIDLTSHIVYYLTFEMVLMYCDVIEGRLMTDTAMAIDQRYSTLHVRIRYLWDLIDGFFPDLGNSTYQLVALLEPLSLAYLQLKDITFSLRGAFLSHCFAEIQEILQDNGFYTEETFQTLTQALDFVFITEDIHITGEIFSFFRSFGHPRLEAITAAENVRKHMNQPKVVSYETMMKGHAIFCGIIINGYRDRHGGTWPPMDLPVHASPIIRNAHASGEGITYSQCIENWKSFAGIRFKCFMPLSLDSDLTMYLKDKALAALRKEWDSVYPKEFLRYNPPRSTESRRLVNVFLEDSQFDPYNMIMYVISGQYLEDPDFNLSYSLKEKEIKEVGRLFAKMTYKMRACQVIAENLISNGIGKYFKDNGMAKDEHDLTKSLHTLAVSGVPKDKKDSHRGLTNQRKSLKPAPYRGTRHSVSSPSSRYIDPNPNFCTSRREDNDIEIYETVSAFITTDLKKYCLNWRYETISIFAQRLNEIYGLPSFFQWLHRRLEQSILYVSDPHCPPDLDRHVDLNTAPNSQIFIKYPMGGVEGYCQKLWTISTIPYLYLAAHESGVRIASLVQGDNQTIAVTKRVPSTWSYALKKSEASRVTTEYFIALRQRLHDVGHHLKANETIISSHFFVYSKGIYYDGMLISQSLKSIARCVFWSETIVDETRAACSNISTTLAKAIEKGFDRYLAYTLNILKIIQQVLISLGFTINSAMTRDVIEPLLQDHCLLTKMAILPAPIGGFNYLNMSRLFVRNIGDPVTSSIADLKRMIRSGLLGVEILHQVMTQYPGDSSYLDWASDPYSANLPCVQSITRLLKNITARHVLINSPNPMLRGLFHDESQDEDEALAAFLMDRKIIIPRAAHEILDNTITGAREAIAGMLDTTKGLIRASMKRGGLTPRIITRLSTYDYEQFRAGIRLFSGKGHDQLIDQDSCSVQLARALRNHMWAKLAKGRPIYGLEVPDILESMKGYMIRRHESCLLCASGSHNYGWFFIPANCQLDSITEGTSALRVPYIGSTTEERTDMKLAFVKSPSRSLKSAVRIATVYSWAYGDDDESWQEAWTLAKQRADISLEELRMITPISTSTNLAHRLRDKSTQVKYSGTSLIRVARYATISNDNLSFIIDDKKVDTNFIYQQGMLLGLGILEHLFRLSSTTGDSNTVLHLHVETDCCVIPMSDHPRVPGLRKVVIPRNICTNPLIYDSNPIIEKDAVRLYNQSHRKHIVEFVTWTTGQLYHVLAKSTAMSMVEMITKFEKDHLNEVTALIGDDDINSFITEFLLVEPRLFTVYLGQCAAINWGFEIHYHRPSGKYQMGELLFSFLSRMSKGVFKILANALSHPKVYRRFWDSGMIEPVHGPSLDSQNLHITVCNLIYNCYMIYLDLLLNDELDDFSFILCESDEDVIPERFDNIQARHLCILSDLYCNPRDCPQIRGLTPTQKCAVLSGYLKSKALESHVGLTWNDKPILIDQYSCSLTYLRRGSIKQIRLRVDPGFITDAVGCLERRPLRNNSTSKASELTSGFDPPKDDLAKLLSQLSTRTHNLPITGLGVRNYEVHSFRRIGINSTACYKAVEIASVIKNEFTSEEHGLFLGEGSGAMLTVYKELLRLSRCYYNSGVSVESRTGQREISPYPSEVSLVEHQLGLDKLVTVLFNGRPEVTWVGSVDCYKYILSQISASSLGLIHSDIESLPDKDIIEKLEELSAILSMTLILGKVGSVLVIKIMPVSGDWVQGFILYALPHFLRSFIVYPRYSNFVSTEAYLVFTGLRAGRLINPEGIKQQILRVGIRTSPGLVGHILSSKQTACVQSLHGPPFHAKSFNPHLQGLTSIEKVLINCGLTINGLKVCKNLLHHDISSGEEGLKGSITILYRELARFKDNHQSSHGMFHAYPVLIASQERELVSIIAKKYCGYILLYSGDLYEITRIVRNLKANHIIFDLHRNLFMDNLSRSDRSLILTTIPKKNWLFQLETKEIKEWFKLLGYSALIRNH", - "output": "host cell cytoplasm ; virion component ; ATP binding ; GTPase activity ; mRNA (guanine-N7-)-methyltransferase activity ; RNA-dependent RNA polymerase activity" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MGIKIYRPKTSSLRYKTTLSFDELSKGNDPLKSLTKGKVSRAGRDSSGRISVRRRGGGHKRRYREIDFARRDKFGIPARVAAIEYDPNRSPNIALLVYRDGDKRYIIAPKGVKVGDILESGPNAPIKIGNALPLENIPVGKMVHNIELNIGKGGQLVRGAGGYAMIIASDGDYVTVKLPSGEMRMIFKKCIATLGEVGNEDYMNVSIGKAGKSRWLGRRPKVRGVAMNPIDHPHGGGEGKTSGGRHPVSPWGQPAKGYKTRKKNKYSDKFIVKRRNN", - "output": "large ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; transferase activity ; translation" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MKLLVLCVFAMMATLAVSRRYQFVQHQYIRKAFEVALKVEIIAGFDRTLVKWLRNHGRGLNENQRKVLYFVNRRYMQTHWQNYMLWIVKKTNALGRPPVVADYRALGAEIGRRIDMGYFYNFLKNRVMIPKYLPYMRRLNNMRPEDVPVANRNPGK", - "output": "acrosomal lumen ; single fertilization" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MNLNIETTTQDKFYEVKVGGELDVYTVPELEEVLTPMRQDGTRDIYVNLENVSYMDSTGLGLFVGTLKALNQNDKELYILGVSDRIGRLFEITGLKDLMHVNEGTEVE", - "output": "anti-sigma factor antagonist activity" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MTYNAGNYDVIVVGAGHAGVESAYAAARMGAKTLMLTLNLDMIAFMPCNPSIGGPAKGIVVREIDALGGIMGKVIDKSYIQMRMLNTGKGPAVQALRAQADKPIYMKEMKHLMENEENLTIRQGMVNELIVEDGICKGVITETHAAYYADSVIVTTGTFMRGKVLMGDLEYESGPNNQRVSIKLSEDLEKHGFEITRFKTGTPPRVNSHTIDYSKTEIQPGDDNPKSFSYETTEQITDQIPCWLTYTNEFTHQVINDNLELSSMYSGMKRGTGPRYCPSIEDKIVRFNDKPRHQIFLEPEGRDTEEVYVQGLSTSLPESIQHEMIKSVPGLEKAEIMRAGYAIEYDAVVPTQLWPTLETKRLPGLFTAGQINGTSGYEEAAGQGLMAGMNAAAKSLNKEPIILDRSQAYIGVMIDDLVTKGTNEPYRLLTSRAEYRLLLRHDNADLRLTDIGYDYGLITEERYQRFTEKKQQIEQEKKRLSKIIIKPTEDIQDIMEKAGASRLKEAIKAYDLMKRPELSYDIVDQMIESNLELSEEVKEQVAIQIKYEGYIKKAKEQVDRMLKMEDKKIPEDIDYDAINGIATEAVEKLKKVRPLSVGQASRISGVNPADVSILLVYIEQGSIAKVAND", - "output": "cytoplasm ; flavin adenine dinucleotide binding ; tRNA wobble uridine modification" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MSQKIQQHQFPDFYCCYLLQSINKRQSFYVGSTPNPVRRLRQHNGKLAVGGAYRTKRDGSRPWEMIMIVRGFPSKIAALQFEHAWQHGYQTHYIAEKDRVVKHKAGGRTLHHKVALMKLLLKHEFFQRMNLIVDVFNIKAWEVWKQDKFFIERDRFPINIQINENALEEPKEKTVDVLMDHSDENLKVVEAVYTKVIENERNIFETFEKKLTTGVVRCEICEKEIDYTSEEQNLKPFVALCNNKDCGSVNHLKCLHRYFLDDEQLIVGRRNLIPRGGKCPKCDTFCDWTTLVKFSTRMKLAHGK", - "output": "Slx1-Slx4 complex ; 5'-flap endonuclease activity ; metal ion binding ; DNA recombination ; DNA repair" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MNATIFAFLLLLNLAMHNATEQSSETDMDDTLLIPEINRGRCIEEGKWCPKKAPCCGRLECKGPSPKQKKCTRP", - "output": "extracellular region ; ion channel regulator activity ; toxin activity" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "LCNERPSQTWSGNCGNTAHCDKQCQDWEKASHGACHKRENHWKCFCYFNC", - "output": "extracellular region ; defense response to fungus ; killing of cells of another organism" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MKSLSFSFLVTLFLYLTLSSARTLGKDVNKRVTAGSLQQVTGFGDNASGTLMYIYVPKNLATNPGIVVAIHYCTGTAQAYYTGSPYAQLAEQYGFIVIYPQSPYSGTCWDVSSQAALTHNGGGDSNSIANMVTWTISQYNANTAKVFVTGSSSGAMMTNVMAATYPELFAAATVYSGVGAGCFYSSSNQADAWNSSCATGSVISTPAVWGGIAKNMYSGYSGSRPRMQIYHGSADTTLYPQNYYETCKQWAGVFGYNYDSPQSTLANTPDANYQTTNWGPNLQGIYATGVGHTVPIHGAKDMEWFGFSGSGSSSTTTASATKTSTTSTTSTKTTSSTSSTTTSSTGVAAHWGQCGGSGWTGPTVCESGYTCTYSNAWYSQCL", - "output": "extracellular region ; acetylxylan esterase activity ; cellulose binding ; cellulose catabolic process ; xylan catabolic process" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MGKCSYRFISLQTLTPNSLLDHSPNPTIWAKPLQIGSLTLHSRVLQSPLSGVTDLVFRRLVRRYAPQAMLYTEMVSATEIHHLRTLPQVMEIDPRENPISIQLFDCRPDFMAEAAQKAVAQGAQSVDINMGCPVNKITKKGGGSSLLRQPAVAEAIVKTVVAAVDVPVTVKTRLGWDDGEINIVEFAQRLQDAGAQMLTLHGRTRAQGYNGRARWQWIAKVKQALTIPVIANGDIFSVEAAIACLEETGADGVMCSRGSLGYPFLVGEIEHFFKTGEKRKAPTVAEKLTCAQEHLQMLWEYKGQRGLFQARKHLAWYCKDFPGAAALREQLFQINSVQEGKDLLDQAISTAKLCL", - "output": "flavin adenine dinucleotide binding ; tRNA binding ; tRNA dihydrouridine synthase activity" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MNVLEQLMTYYAQNGSYVMDEFGRHFLMSAYGVLFAAVVGVPAGILIAHFRRLSAWVFAVTNVIQTIPALAMLAVLMLVMGLGANTVILSLFLYSLLPIIRNTYTGIISIEHAYLESGKAMGMTKFQVLRMVELPLALSVIMAGLRTALVIAIGITAIGTFVGAGGLGDMIVRGSNATNGTAIILAGAIPTAVMAVGADLLMAWLERALSPVKKKRTGAKHVQSAA", - "output": "plasma membrane ; transmembrane transporter activity ; amino acid transport" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MKLVFYGAGNMAQAIFTGIINSSNLDANDIYLTNKSNEQALKAFAEKLGVNYSYDDATLLKDADYVFLGTKPHDFDALATRIKPHITKDNCFISIMAGIPIDYIKQQLECQNPVARIMPNTNAQVGHSVTGISFSNNFDPKSKDEINDLVKAFGSVIEVSEDHLHQVTAITGSGPAFLYHVFEQYVKAGTKLGLEKEQVEESIRNLIIGTSKMIERSDLSMAQLRKNITSKGGTTQAGLDTLSQYDLVSIFEDCLNAAVDRSIELSNVEDQ", - "output": "cytoplasm ; pyrroline-5-carboxylate reductase activity ; L-proline biosynthetic process" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MVLAGVAQRPWIKSCDRAFYGSMALSAATTEAPEQTGFWALTLGGIGVVFGDIGTSPLYAFREAVAGAAGGAPASRVLVLGVLSLILWALLIVVTAKYVLLLLRADNNGEGGTLSLMALGRRALGRRSLFLLVLGVIGASMFIGDSMITPAISVLSAIEGLKIAAPALEHYVVPLTVLVLVLLFGVQSHGTAIVARFFGPVMLVWFATLAAMGAMHIMDDPSVLAAINPWYAAQFLASHGTIGLVTLGAVFLAVTGGEALYADLGHFGRRPIQTAWLGFVLPALLINYFGQGALVLSNPAALENPFYKMVPEALVLPLTLMATAATVIASQAVITGAFSLISQAVQLGLLPRFEVRYTSETNAGQIYLPRVNALLLIGVLLLVLLFQTSSRLASAYGIAVSTTMVVDGIMGFVVIWKLWRWSWPAAALVILPLVLVDAMFFSANLLKLLDGAWVPLLFGLAMAVVIWTWRRGVALLMIKSRRAEVPLDDLIGSLEKHPPHIVKGTAVFLTADAEFVPPALLHNLKHNKVLHEHNVILTIETMHTPRVEAADRIRLVKVSEKFSKVALRFGFMETPNVPKALVLARKLGWEFDIMSTSFFVSRRSLKPAAQSEMWRWQTKLFVALAKSANDATDYFQIPTGRVVEVGAQVTI", - "output": "plasma membrane ; potassium ion transmembrane transporter activity ; symporter activity" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MRAWILLLAVLATSQPIVQVASTEDTSISQRFIAAIAPTRTEPSAASAAAAAATATATATATTALAKAFNPFNELLYKSSDSDSDNNNNNYKNRNNNNNNLNKGPRNNKNKGNKHSKSDANRQFNEVHKPRTDQLENSKNKPKQLVNKTNKMAVKDQKHHQPQQQQQQHHKPATTTALTSTESHQSPIETIFVDDPALALEEEVASINVPANAGAIIEEQEPSTYSKKELIKDKLKPDPSTLVEIENSLLSLFNMKRPPKIDRSKIIIPEAMKKLYAEIMGHELDSVNIPRPGLLTKSANTVRSFTHKDSKIDDRFPHHHRFRLHFDVKSIPAEEKLKAAELQLTRDALAQAAVASTSANRTRYQVLVYDITRVGVRGQREPSYLLLDTKTVRLNSTDTVSLDVQPAVDRWLATPQKNYGLLVEVRTMRSLKPAPHHHVRLRRSADEAHEQWQHKQPLLFAYTDDGRHKARSIRDVSGGGGGGGGAGEGGKGNGGGRNRRHQRRPARRKNHEETCRRHSLYVDFADVGWDDWIVAPPGYDAYYCHGKCPFPLADHFNSTNHAVVQTLVNNLNPGKVPKACCVPTQLDSVAMLYLNDQSTVVLKNYQEMTVVGCGCR", - "output": "extracellular region ; growth factor activity ; cell differentiation" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MKRLLILIARAWQLGPSRVLPPSCRYSPSCSQYAIEALEKHGAIKGGWLAAKRLLRCHPWGGHGYDPVP", - "output": "plasma membrane" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MGQKVHPIGMRIGVIRDWDSKWYAEKDYADFLHEDLRIRDYVAKRLSDASVSRVEIERAANRVNITIHTAKPGMVIGKGGSEVEALRKNLNELTQKRVHINIVEIKRADLDAKLVAENIARQLEGRVSFRRAQKQAIQRTMRAGAKGIKTQVSGRLGGADIARAEHYSEGTVPLHTLRADIDYAWEEADTTYGKLGVKVWIYRGEVLPTKKNNVEGGK", - "output": "ribonucleoprotein complex ; ribosome ; mRNA binding ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MSRIGKQPVSIPSGVECSIKGQLLSVKGKKGQMTLDLHPFTKITSEDGFLKLNPVVEDRDHWAICGTMRALVHNMVVGVTQGFEKKLLLMGVGYRAQAQGQKLTLVLGFSHPVEYAVPQGITIETPTPTEIIVKGFDKQLVGEVAAKIRAYRPPEPYKGKGVRYAGEYVMIKEAKKK", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MDKSESTSAGRNRRRRPRRGSRSASSSADANFRVLSQQLSRLNKTLAAGRPTINHPTFVGSERCRPGYTFTSITLKPPKIDRGSYYGKRLLLPDSVTEYDKKLVSRIQIRVNPLPKFDSTVWVTVRKVLASSDLSVAAISAMFADGASPVLVYQYAASGVQANNKLLYDLSAMRADIGDMRKYAILVYSKDDALETDELVLHVDIEHQRIPTSGVLPV", - "output": "ribonucleoprotein complex ; T=3 icosahedral viral capsid ; viral nucleocapsid ; RNA binding ; structural molecule activity" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MLALISRLLDWFRSLFWKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGNVTIKIWDIGGQPRFRSMWERYCRGVNAIVYMIDAADREKIEASRNELHNLLDKPQLQGIPVLVLGNKRDLPNALDEKQLIEKMNLSAIQDREICCYSISCKEKDNIDITLQWLIQHSKSRRS", - "output": "axon cytoplasm ; cytolytic granule membrane ; cytoplasm ; cytosol ; extracellular exosome ; late endosome membrane ; lysosomal membrane ; lysosome ; membrane ; midbody ; spindle midzone ; synapse ; alpha-tubulin binding ; beta-tubulin binding ; G protein activity ; GDP binding ; GTP binding ; GTPase activity ; anterograde axonal transport ; antigen processing and presentation following phagocytosis ; antigen processing and presentation of polysaccharide antigen via MHC class II ; autophagosome-lysosome fusion ; calcium ion regulated lysosome exocytosis ; cell division ; chromosome segregation ; endosomal transport ; endosome to lysosome transport of low-density lipoprotein particle ; late endosome to lysosome transport ; lysosome localization ; natural killer cell mediated cytotoxicity ; phagosome-lysosome fusion ; plasma membrane repair ; protein transport ; viral exocytosis" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MWRRKHPRTSGGTRGVLSGNRGVEYGSGRGHLGTFEGRWRKLPKMPEAVGTDPSTSRKMAELEEVTLDGKPLQALRVTDLKAALEQRGLAKSGQKSALVKRLKGALMLENLQKHSTPHAAFQPNSQIGEEMSQNSFIKQYLEKQQELLRQRLEREAREAAELEEASAESEDEMIHPEGVASLLPPDFQSSLERPELELSRHSPRKSSSISEEKGDSDDEKPRKGERRSSRVRQARAAKLSEGSQPAEEEEDQETPSRNLRVRADRNLKTEEEEEEEEEEEEDDEEEEGDDEGQKSREAPILKEFKEEGEEIPRVKPEEMMDERPKTRSQEQEVLERGGRFTRSQEEARKSHLARQQQEKEMKTTSPLEEEEREIKSSQGLKEKSKSPSPPRLTEDRKKASLVALPEQTASEEETPPPLLTKEASSPPPHPQLHSEEEIEPMEGPAPAVLIQLSPPNTDADTRELLVSQHTVQLVGGLSPLSSPSDTKAESPAEKVPEESVLPLVQKSTLADYSAQKDLEPESDRSAQPLPLKIEELALAKGITEECLKQPSLEQKEGRRASHTLLPSHRLKQSADSSSSRSSSSSSSSSRSRSRSPDSSGSRSHSPLRSKQRDVAQARTHANPRGRPKMGSRSTSESRSRSRSRSRSASSNSRKSLSPGVSRDSSTSYTETKDPSSGQEVATPPVPQLQVCEPKERTSTSSSSVQARRLSQPESAEKHVTQRLQPERGSPKKCEAEEAEPPAATQPQTSETQTSHLPESERIHHTVEEKEEVTMDTSENRPENDVPEPPMPIADQVSNDDRPEGSVEDEEKKESSLPKSFKRKISVVSATKGVPAGNSDTEGGQPGRKRRWGASTATTQKKPSISITTESLKSLIPDIKPLAGQEAVVDLHADDSRISEDETERNGDDGTHDKGLKICRTVTQVVPAEGQENGQREEEEEEKEPEAEPPVPPQVSVEVALPPPAEHEVKKVTLGDTLTRRSISQQKSGVSITIDDPVRTAQVPSPPRGKISNIVHISNLVRPFTLGQLKELLGRTGTLVEEAFWIDKIKSHCFVTYSTVEEAVATRTALHGVKWPQSNPKFLCADYAEQDELDYHRGLLVDRPSETKTEEQGIPRPLHPPPPPPVQPPQHPRAEQREQERAVREQWAEREREMERRERTRSEREWDRDKVREGPRSRSRSRDRRRKERAKSKEKKSEKKEKAQEEPPAKLLDDLFRKTKAAPCIYWLPLTDSQIVQKEAERAERAKEREKRRKEQEEEEQKEREKEAERERNRQLEREKRREHSRERDRERERERERDRGDRDRDRERDRERGRERDRRDTKRHSRSRSRSTPVRDRGGRR", - "output": "ASAP complex ; cytosol ; nuclear speck ; nucleoplasm ; nucleus ; plasma membrane ; ATP hydrolysis activity ; enzyme binding ; nucleic acid binding ; RNA binding ; apoptotic chromosome condensation ; erythrocyte differentiation ; mRNA processing ; negative regulation of mRNA splicing, via spliceosome ; positive regulation of apoptotic process ; positive regulation of monocyte differentiation ; RNA splicing" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MALSQSVPFSATELLLASAIFCLVFWVLKGLRPRVPKGLKSPPEPWGWPLLGHVLTLRKNPHLALSRMSQRYGDVLQIRIGSTPVLVLSGLDTIRQALVRQGDDFKGRPDLYSSTLITDGQSLTFSPDSGPVWAARRHLAQNALNTFSIASDPASSYSCYLEEHVSKEAEALISRLQELMAGPGHFDPYNQVVVSVVNVIGAMCFGQHFPESSDEMLSLVKNTHEFVETASSGNPVDFFPILRYLPNPALQRFKAFNQRFLRFLRKTVQEHYQDFDKNSVQDIMGALFKYSKKGPRASGNLIPQEKIVNLVNDIFGAGFDTVTTAISWSLMYLVTKPEIQRKIQKELDTMIGRGRRPRLSDRPQLPYLKAFILETFRHSSFLPFTIPHSTTRDTTLNGFYIPKECCVFVNQWQVNHDPELWEDPSEFWPERFLTTDGTAINKPLSEKVMLFGMGKRRCIGEVLANWEVFLFLAILLQQLEFSVPPGVKVDLTPIYGLTMKHARCEHVQARLRFSIK", - "output": "endoplasmic reticulum membrane ; aromatase activity ; estrogen 16-alpha-hydroxylase activity ; estrogen 2-hydroxylase activity ; heme binding ; hydroperoxy icosatetraenoate dehydratase activity ; iron ion binding ; arachidonic acid metabolic process ; cholesterol metabolic process ; estrogen metabolic process ; retinol metabolic process" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MPLKRSLKESIERLSSFQSKYNIFTSINPSPYSITNKKGTKETLTGCVASIKDNIVTKDFPTTCASHILENFKSPFDATVVKLLKQAGVHILGKTNLDEFGMGSGGVHSIRGPVINPLYPHEDKKIMGGSSSGAAASVACDLVDFALGTDTGGSVRLPACYGSVLGFKPSYGRLSRFGVIAYSQSLDTVGILSKKINVLRKVFHTLDKYDMKDPTSLSVELRELIEGNKKVRRPLKVGIVKEFSHESMPIGFHRLYLSLLEKLINLGLEIYPVSIPSVKNCLPIYYTLSPAEAASNLSRYDGIRYGYRDSELDIKDGILFAPTRSKFGTEVKNRIILGNYNLCSDAFKNNFIKAEKLRVNLIDEFDGIFRFPNVLTNSKGNPDGLDLLIVPTSSKLPGSIRDFEEEEAKSPANSYINDVFTVPMSLAGLPSLSMPLKEKTPIGLQVVGQYGDDSTVLDFVESIS", - "output": "glutamyl-tRNA(Gln) amidotransferase complex ; mitochondrion ; ATP binding ; glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity ; endoplasmic reticulum organization ; glutaminyl-tRNAGln biosynthesis via transamidation ; mitochondrial translation" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MTKTVFVLNGPNLNLLGKREPGIYGVATLDDIEASCKREAGQLELQIDFRQSNHEGDLVSWIQEAGEKNAYVLINPAAYSHTSVAIHDAIRSARVTVVEVHLSNIHAREAFRHHSHVSAVAKGVICGFGAEGYLLGLRALAAIAKEEEKNGQSIKGA", - "output": "3-dehydroquinate dehydratase activity ; amino acid biosynthetic process ; aromatic amino acid family biosynthetic process ; chorismate biosynthetic process" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "METLSFPRYNVAELVVHIRNKLLTGADGKNLSKSDFLPNPKSDVLYMIYMKALQLVYGVRLEHFYMMPMNIEVTYPHLMEGFLPVRSLFFYMDSFMPICRVNDFEIVDILNPRTNRTSRFLSGIINFIHFRETCLEKCEEFLLQNKSSMVRMQQLSNVHQEALMKLEKLNTVPAEEREEFKQFMDDIQELQHLLNEEFRQKTTLLQEEYAKMKSDISEKTKHLNEQKLSLVSLKEVEDNLKSKIVDSPEKLKNYKDKMKGTVQKLRSAREKVMEQYDIYRDSVDCLPSCQLEVQLYQKKSQDLADNREKLSSLLKESLNLEDQIESDSSELKKLKTEENSLIRMTTVKKEKLATARFKINKKQEDVKHYKQAMIEDCNKVQEKRDAVCEQVTTVNQEIHKIKSAIQQLRDTKKREILKSQEIFVNLKSALEKYHEGIEKVAEERSAKLEEKTAELKKRMVRMV", - "output": "cytosol ; kinetochore ; Ndc80 complex ; nucleoplasm ; protein-containing complex binding ; attachment of mitotic spindle microtubules to kinetochore ; attachment of spindle microtubules to kinetochore ; cell division ; chromosome segregation ; kinetochore organization ; meiotic chromosome segregation ; mitotic spindle assembly checkpoint signaling ; mitotic spindle organization" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MIPELGRRPMHRGNEDSSFGDDYEKEIGVLLGEQQRRQVEADELERELNLFRSGSAPPTVDGSVSAAGGLFSGGGGAPFLEFGGVNKGNGFGGDDEEFRKDPAYLSYYYANMKLNPRLPPPLMSREDLRVAQRLKGSNNVLGGVGDRRKVNDNRSLFSMPPGFEGEKTGASASEWDANGLIGLPGLGLGGKQKSFADIFQADMGHGHPVAQQPSRPASRNTFDENVDSNNNLSPSASQGIGAPSPYSYAAVLGSSLSRNGTPDPQAIARVPSPCLTPIGSGRMSSNDKRNTSNQSPFNGVTSGLNESSDLVNALSGLNLSCSVGLDDRSQAEQDVEKVRNYMFGLQGGHNEVNQHEFPNKSDQAHKATGSLRNSQLRGPHGSAYNGGVGLANPYQQLDSPNYCLNNYALNPAVASMMANQLGNNNFAPMYDNVSALGFSGMDSRHHGRGFVSSGQNLSESRNLGRFSNRMMGGGAGLQSHMVDPMYNQYADSLDLLNDPSMDRNFMGGSSYMDMLELQRAYLGAQKSQYGVPYKSGSPNSHSYYGSPTFGSNMSYPGSPLAHHGMPNSLMSPYSPMRRDEVNMRFPSATRNYSGGLMGSWHMDASFDEGFGSSMLEEFKSNKTRGFELSEIAGHVVEFSSDQYGSRFIQQKLETATTDEKNMVYEEIMPQALVLMTDVFGNYVIQKFFEHGLPPQRRELAEKLFDHVLPLSLQMYGCRVIQKAIEVVDLDQKIKMVKELDGHVMRCVRDQNGNHVVQKCIECVPEENIEFIISTFFGHVVTLSTHPYGCRVIQRVLEHCHDPDTQSKVMEEILSTVSMLAQDQYGNYVVQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNVVEKCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQRELILTRIKVHLTALKKYTYGKHVVARIEKLVAAGERRMALQSLTQPQMA", - "output": "cytoplasm ; mRNA binding ; post-transcriptional regulation of gene expression ; regulation of translation" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MNIDCLCRWVVLPLLRYPLLVALVLRWSLSDSISICLTIYTLLINAFLIANSYIKRSGQVAWKSLREFKNGIVLITGGSKGLGRAIVSQLLQDYSNLTILNVDICPSSVRNTRVKDLICDLSDDEEVAALLNLLKRKYKNEIRLIVNNAGVRANFTGFNGMERDNLDKIFKINTFAPLQFIQELAPSRHSTRQCYIVNIASILGILTPAKVAAYAASKAALIAFHQSYSFELQNEGVRNIRTLLVTPGQLNTEMFAGFKPPRQFFAPVIDITTLAAKIVRYCELGQRGQLNEPFYCSFAHLLMCVPYSLQRIVRSFSRIDCCLPDE", - "output": "endoplasmic reticulum ; mitochondrial membrane ; mitochondrion ; oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor ; response to xenobiotic stimulus" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MAEPSVESSSPGGSATSEDHEFDPSADMLVHDFDDERTLEEEEMMEGETNFSSEIEDLAREGDMPIHELLSLYGYDSTVRLPEEEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQSSNDDPSQSVTSQDAQEIIRPRRCKYFDTNSEIEEESEEDEDYIPSEDWKKEIMVGSMFQAEIPVGVCRYKENEKVYENDDQLLWDPECLPEEKVVVFLKDASRRTGDEKGVEAIPEGSHIKDNEQALYELVKCSFDTEEALRRLRFNVKAAREELSVWTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDYMDRLLDESESAASSRAPSPPPTASNSSNSQSEKEDGAVSSRNQNGVSSNGPGEILNKEEVKVEGLHVNGPTGGNKKPLLTDMDTNGYEANNLTTDPKLAHMTARNENDFDEKNERPAKRRRINSSGKESPGSSEFFQEAVSHGKFEEHENTND", - "output": "nucleoplasm ; nucleus ; protein-containing complex ; transcription repressor complex ; histone deacetylase activity ; histone deacetylase binding ; transcription corepressor activity ; chromatin remodeling ; histone deacetylation ; negative regulation of transcription by RNA polymerase II ; regulation of DNA-templated transcription" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MEKLLDRIDSPADLKKLQVSELTKLAEEIRQEMITVLSKCGGHLGPNLGVVELTLALHYVFDVPRDHFVFDVSHQAYVHKLITGRKNRFHTIRQHGGISGFMSREESEYDCYGAGHAGTALSAALGMAVARDRRGGKEHVIALCGDAAFTCGITFEALNNVASTTQRLIVILNDNEWSIDKNVGAIASYFNKIVTNPAYSYLRDRVEKVLEKWPGKNVLKVARKAEEAFKSLLWPSVIFEELGLTYHGPIDGHDIARLISTFEFLKNQEYPVLLHVITQKGRGFPPALEKQKKFHGLGPYNPITGETPSSPRKTFSEVFAETMIKLADMNRNVVAITAAMPNGTALDKFQPKFPDRYFDVGIAEEHAVIFAAGMATKGFKPYCAIYSTFLQRAYDPIIHDVCLQKLPVVFCLDRGGLSGDDGPTHHGLFDVAYLRTVPNITIMHPKDEDELADMLFTAMHHPGPVAIRYPRGSGSGVAVKERPELIPIGRAEVIKHGRDVAIFSLGIMVEMGKELAQKLEECGYSAALINPRTVKPFDRGTLEFFARSVDLIVSIEDHVLAGGFGSLILEELQALGLRIPVVRIGWPDKFIEHGKVDILRKKYGITVENALEQSLKILKHPKSDTNLEIA", - "output": "1-deoxy-D-xylulose-5-phosphate synthase activity ; magnesium ion binding ; thiamine pyrophosphate binding ; 1-deoxy-D-xylulose 5-phosphate biosynthetic process ; terpenoid biosynthetic process ; thiamine biosynthetic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MKKVIVGTLFALVLVLAGCSSQNSDTKKTGDKLNVVATYSILADIVKNVGGDKIELHSIVPVGVDPHEYDPLPDNIQSAADADLIFYNGLNLETGNGWFDRMLETADKSRDDKDQVVELSKGVKPKYLTEKGKTSETDPHAWLDLHNGIIYTENVRDALVKADPDNANFYKENAKKYIDKLATLDKEAKQKFADLPENQKTLVTSEGAFKYFAARYGLKAAYIWEINTESQGTPDQMKQIISIVEKERVPNLFVETSVDPRSMESVSKETGVPIFAKIFTDSTAKKGEEGDTYLEMMRYNLDKIHDGLAK", - "output": "plasma membrane ; metal ion binding ; cell adhesion ; metal ion transport" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MKKVLLVNGPNLNRLGVREVNVYGKGTLATLEADMKQEAEAMGVELECFQSNHEGAIIDRIHEAEDIYEGIILNPGAFTHYSYAIRDAIASISIPVIEVHISNIHQRESFRHESVTAAVCAGQIVGFGFYGYKLALFALMEKLREA", - "output": "3-dehydroquinate dehydratase activity ; amino acid biosynthetic process ; aromatic amino acid family biosynthetic process ; chorismate biosynthetic process" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MARYIGPKCKLSRREGTDLFLKSGIRPLESKCKADQAPGQAAGASGRRPARLSDYGVQLREKQKVRRTYGVLEKQFRSYYKKAAASKGATGEVLLQLLEGRLDNVVYRMGFGSTRSEARQLVSHRAILVNGQSVNVASYQVKPGDQINVREKSKNQLRVKNAMELAQQRGFMPWIEVDDKKLEGTYKAKPERIDLPAEINENLIVELYSK", - "output": "small ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MAKLHDYYRDQVVNELKTKFNYASVMQVPRIEKITLNMGVGEALTDKKLLDNAVADLTAISGQKPLITKARKSVAGFKIRQGYPIGCKVTLRGERMWEFLERLITIAVPRIRDFRGLSAKSFDGRGNYSMGVREQIIFPEIDYDKVDRVRGLDITITTTAKSDEEGQALLAAFNFPFRK", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; tRNA binding ; translation" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MASRKEALARRANRVRRQLKSVANGRPRLSVHRSSKNIYVQVIDDAAGKTLASASTLDKDLRGSLKTGADTAAAALVGKLVAERATKAGVKEVVFDRGAFIYHGRIKALAEAAREGGLSF", - "output": "cytoplasm ; ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MLLVLVVLIPVLVSSGGPDGHYEMLGTCRMVCDPYPARGPGAGARSDGGDALSEQSGAPPPSTLVQGPQGKPGRTGKPGPPGPPGDRGPPGPVGPPGEKGEPGKPGPPGLPGSGGSGAISTATYTTVPRVAFYAGLKNPHEGYEVLKFDDVVTNLGNNYDAASGKFTCNIPGTYFFTYHVLMRGGDGTSMWADLCKNGQVRASAIAQDADQNYDYASNSVILHLDAGDEVFIKLDGGKAHGGNSNKYSTFSGFIIYSD", - "output": "cerebellar climbing fiber to Purkinje cell synapse ; climbing fiber ; collagen trimer ; cytoplasm ; presynapse ; synaptic cleft ; signaling receptor binding ; maintenance of synapse structure ; motor learning ; neuron remodeling ; regulation of synapse pruning" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MIIGVLSVQGGFVEHMRSIERLGHEARAVRRAEQLEGLDGLIMPGGESTTMSKLLELGGMLEPLRELIADGLPVFGTCAGLILLADRVLDTRSDAHSLHAMDITVRRNAFGRQVDSFETQLPFGDIDTPVEAVFIRAPKVEEVGDGVEVVSTLPDGTVVGVRQGNVLGCSFHPELSEDDRVHEYFLRMVKQRGVE", - "output": "glutaminase activity ; pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity ; glutamine catabolic process ; pyridoxal phosphate biosynthetic process" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MEISALLTSAGINISICIVLLSLYSILRKQPANYCVYFGRRLVCGGARRYDPFWYERFVPSPSWLVKAWETSEDELLAAAGLDAVVFLRMVIFSIRIFFIVAVICIAFVLPVNYYGQPMVHKEIHLESSEVFTIENLKEGSKWLWVHCLALYIITSAACLLLYFEYSTIAKMRLGHITGCASKPSQFTVLIRAIPWSPEQSYSDTLSKFFTNYYSSSYVSHQMVYHNGIIQRLLRDAERMCQTLKHVSPEINCKPSLRPCTFCGGPTATSSFHILSNEADSVKGMELGELTMTTTTTEQERSAAFVFFKTRYDALVVSEVLQSSNPMLWVTDLAPEPHDVYWKNLNIPYRQLWIRKIATLVGAVAFMFVFLIPVTFIQGLTQLVQLSHAFPFLRGILSKNFINQVITGYLPSVILILFFYAVPPLMMYFSALEGCISRSIRKKSACIKVLYFTIWNVFFVNILSGSVIRQLNVFSSVRDIPAQLARAVPTQAGFFMTYCFTSGWASLACEIMQPMALIWNLVAKVVTKNEDESYETLRFPYHTEIPRLLLFGLLGFTNSVIAPLILPFLLIYFFLAYLIYKNQILNVYITKYESGGQYWPIFHNTTIFSLILTQIIALGFFGLKLSTVASGFTIPLILLTLLFSEYCRQRFAPIFNKNPAQVLIDMDRADEISGKMEELHKKLHNVYSQIPLHSQKSSSKAECSNPFKKQELPDPEKLKPEEGDAIAKELWGFQGNESGQEHDTKS", - "output": "plasma membrane ; calcium activated cation channel activity" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MNVNIKTREYTTVTEVSGPLMIVEGVEGVAYSEIVEIETPTGEKRRGQVLEVREDLAVVQVFEGTSDLNTETTKIRFTGETAKIGVSLDMMGRIFDGTGKPIDGGPEIIPEKELDINGSPMNPAAREFPAEFIQTGISTIDGMNTLVRGQKLPIFSGSGLPHNELAAQIARQAKVLAEESEFAVIFAAMGITHEEANYFMRDFERTGALERVTVFMNLADDPAIERIITPRMALTTAEYFAFEHDMHVLVILTDLTNYCEALREISAAREEVPGRRGYPGYMYTDLASLYERAGRIVGKEGSITQMPILVMPQDDITHPIPDLTGYITEGQIVLSRDLHRKGIYPPVDVLPSLSRLMSGGIGEGRTREDHSGVSDQLYSAYAEGRDLRDLMAVVGEEALTERDRKFLKFADEFEKRFITQARDEDRSIEETLNLGWELLSLLPRSELKRVREEHIPKYLPGAE", - "output": "proton-transporting two-sector ATPase complex, catalytic domain ; ATP binding ; proton-transporting ATP synthase activity, rotational mechanism ; proton motive force-driven plasma membrane ATP synthesis" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MLAIGIIRSMKTDDFDFHLPDELIAQFPLANRSDSRMLYVNGKHADLRDAAFRNLPDYLKRGDVIVLNNTRVVKARLSGVKSTGGKVEVMVERILDTHRARVLIRASHALVIGSTLLLENKITAQVEAREQDIYTLCFMHSLPLIELLDQFGHTPLPPYIGRNATVSDENRYQTVFAQESGAVAAPTAGLHFDETMLQTLRTLGVKIIYVTLHVGAGTFQPVRVQNIDQHVMHTEPYHIPTETVEAIQMCKSAGGSVLAVGTTSLRALESCMLTNDGTLVAGAGETNLFITPGFRFRIVDRLLTNFHLPRSTLLMLVSAFAGMETIRHAYRHAIDNHYRFFSYGDAMLIDSQP", - "output": "cytoplasm ; S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity ; queuosine biosynthetic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MKFPMVAAALLLLCAVRAEEEDKKEDVGTVVGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTPEGERLIGDAAKNQLTSNPENTVFDAKRLIGRTWNDPSVQQDIKFLPFKVVEKKTKPYIQVDIGGGQTKTFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVMRIINEPTAAAIAYGLDKREGEKNILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQRVMEHFIKLYKKKTGKDVRKDNRAVQKLRREVEKAKRALSSQHQARIEIESFFEGEDFSETLTRAKFEELNMDLFRSTMKPVQKVLEDSDLKKSDIDEIVLVGGSTRIPKIQQLVKEFFNGKEPSRGINPDEAVAYGAAVQAGVLSGDQDTGDLVLLDVCPLTLGIETVGGVMTKLIPRNTVVPTKKSQIFSTASDNQPTVTIKVYEGERPLTKDNHLLGTFDLTGIPPAPRGVPQIEVTFEIDVNGILRVTAEDKGTGNKNKITITNDQNRLTPEEIERMVNDAEKFAEEDKKLKERIDTRNELESYAYSLKNQIGDKEKLGGKLSSEDKETMEKAVEEKIEWLESHQDADIEDFKAKKKELEEIVQPIISKLYGSAGPPPTGEEDTSEKDEL", - "output": "cell surface ; cytoplasm ; cytosol ; endoplasmic reticulum lumen ; intracellular membrane-bounded organelle ; melanosome ; mitochondrion ; ATP binding ; ATP hydrolysis activity ; ATP-dependent protein folding chaperone ; protein domain specific binding ; maintenance of protein localization in endoplasmic reticulum ; negative regulation of IRE1-mediated unfolded protein response ; negative regulation of protein-containing complex assembly ; positive regulation of cell migration ; post-translational protein targeting to membrane, translocation" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MAAEEATEFYLRYYVGHKGKFGHEFLEFEFREDGKLRYANNSNYKNDTIIRKEVFLTPAVLKECKRIVSESEILKEDDNNWPEPDRVGKQELEIVLGNEHISFATSKIGSLVDCQSSNDPEGLRIFYYLVQDLKCLVFSLISLHFKIKPI", - "output": "exon-exon junction complex ; nuclear speck ; nucleolus ; nucleoplasm ; P-body ; RNA binding ; embryo development ending in seed dormancy ; mRNA processing ; mRNA transport ; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay ; pollen tube guidance ; positive regulation of gene expression ; regulation of translation ; RNA splicing" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MTVLLDANVLIALVVAEHVHHDAAADWLMASDTGFATCPMTQGSLVRFLVRSGQSAAAARDVVSAVQCTSRHEFWPDALSFAGVEVAGVVGHRQVTDAYLAQLARSHDGQLATLDSGLAHLHGDVAVLIPTTT", - "output": "magnesium ion binding ; ribonuclease activity ; negative regulation of growth" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MRADIHPKYEKLVATCSCGNVIETRSALGKETIYLDVCSACHPFYTGKQKNVDTGGRIDKFKQRFAGMSRSIKR", - "output": "ribonucleoprotein complex ; ribosome ; metal ion binding ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "QHSTDYDEEEEDRAKLHLDAR", - "output": "extracellular region ; adaptive immune response ; blood coagulation ; innate immune response" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MADLKQVYHDKVVPELQAKFGYSNVMQVPRLQKIVVNMGVGEAIADKNFLNNAIGNLEAITGQKAQTTYAKKSIAGFKLREGQAVGCRVTLRRRQMWEFLDRLINAALPRVRDFRGVSEKAFDGRGNYTMGIKEQIIFPEIDYDKVDKVRGMDICIVTSAKTDDEARQLLAGFNMPFRKKEGNNG", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; tRNA binding ; translation" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MAKMEVKSSLLDNMIGVGDMVLLEPLNEETFIDNLKKRFDHNEIYTYIGSVVISVNPYRSLPIYSPEKVEDYRNRNFYELSPHIFALSDEAYRSLRDQDKDQCILITGESGAGKTEASKLVMSYVAAVCGKGAEVNQVKEQLLQSNPVLEAFGNAKTVRNDNSSRFGKYMDIEFDFKGDPLGGVISNYLLEKSRVVKQPRGERNFHVFYQLLSGASEELLYKLKLERDFSRYNYLSLDSAKVNGVDDAANFRTVRNAMQIVGFLDHEAEAVLEVVAAVLKLGNIEFKPESRVNGLDESKIKDKNELKEICELTSIDQVVLERAFSFRTVEAKQEKVSTTLNVAQAYYARDALAKNLYSRLFSWLVNRINESIKAQTKVRKKVMGVLDIYGFEIFEDNSFEQFIINYCNEKLQQIFIELTLKEEQEEYIREDIEWTHIDYFNNAIICDLIENNTNGILAMLDEECLRPGTVTDETFLEKLNQVCATHQHFESRMSKCSRFLNDTTLPHSCFRIQHYAGKVLYQVEGFVDKNNDLLYRDLSQAMWKAGHSLIKSLFPEGNPAKVNLKRPPTAGSQFKASVATLMRNLQTKNPNYIRCIKPNDKKAAHIFNESLVCHQIRYLGLLENVRVRRAGYAFRQAYEPCLERYKMLCKQTWPHWKGPARSGVEVLFNELEIPVEEHSFGRSKIFIRNPRTLFQLEDLRKQRLEDLATLIQKIYRGWKCRTHFLLMKRSQVVIAAWYRRYAQQKRYQQIKSSALVIQSYIRGWKARKILRELKHQKRCKEAATTIAAYWHGTQARRELKRLKEEARRKHAVAVIWAYWLGLKVRREYRKFFRANAGKKIYEFTLQRIVQKYLLEMKNKMPSLSPIDKNWPSRPYLFLDSTHKELKRIFHLWRCKKYRDQFTDQQKLIYEEKLEASELFKDKKALYPSSVGQPFQGAYLEINKNPKYKKLKDAIEEKIIIAEVVNKINRANGKSTSRIFLLTNNNLLLADQKSGQIKSEVPLVDVTKVSMSSQNDGFFAVHLKEGSEAASKGDFLFSSDHLIEMATKLYRTTLSQTKQKLNIEISDEFLVQFRQDKVCVKFIQGNQKNGSVPTCKRKNNRLLEVAVP", - "output": "actin cytoskeleton ; actin filament ; apical part of cell ; brush border ; cell periphery ; cytoplasm ; early endosome ; endosome membrane ; filopodium ; myosin complex ; perinuclear region of cytoplasm ; plasma membrane ; trans-Golgi network membrane ; vesicle ; actin binding ; actin filament binding ; ATP binding ; calmodulin binding ; cytoskeletal motor activity ; microfilament motor activity ; phosphatidylinositol-3,4,5-trisphosphate binding ; phosphatidylinositol-4,5-bisphosphate binding ; actin filament bundle assembly ; actin filament organization ; actin filament-based movement ; post-Golgi vesicle-mediated transport ; transferrin transport ; vesicle transport along actin filament" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MMALGEPYYSSKPDKDFNFGSTMARRQMTPTMVTKLPKFVRNSPQAYDWIVRGLIFPTTGKTYFQRVVVITGGLEDGTYGSYAFNGSEWVEIYPIEHLNLMSSLKLIHKANALQERLRLSQEEKATLALDVQFLQHENVRLKELIPKPEPRKIQMKWIIVGAVLTFLSLIPGGYAQSQTNNTIFTDMIAACKYSTETLTENLDLRIKLALANITINDKLDAVRQILNFAFVPRAHWLRTVFYYIHYYEMWNIFMFVLAIGTVMRSARPGTDLITLATSHLSGFRMAVLPTIPFHTTMTLWVMNTLMVCYYFDNLLAITMAILAPILGIIFLCFMEDSNYVSQIRGLIATAVLIAGGHACLTLTGTTTSLFVVILTCRFIRMATVFIGTRFEIRDANGKVVATVPTRIKNVAFDFFQKLKQSGVRVGVNDFVVIKPGALCIIDTPEGKGTGFFSGNDIVTAAHVVGNNTFVSVCYEGLVYEAKVRYMPEKDIAFITCPGDLHPTARLKLSKNPDYSCVTVMAYVNEDLVVSTATAMVHGNTLSYAVRTQDGMSGAPVCDKYGRVLAVHQTNTGYTGGAVIIDPADFHPVKAPSQVELLKEEIERLKAQLNSAAENPVTVVTQQPIVTLEQKSVSDSDVVDLVRTAMEREMKVLRDEINGILAPFLQKKKGKTKHGRGRVRRNLRKGVKLLTEEEYRELLEKGLDRETFLDLIDRIIGERSGYPDYDDEDYYDEDDDGWGMVGDDVEFDYTEVINFDQAKPTPAPRTTKPKPCPEPKIEAQPLDLSQKKEKQPEHEQQVAKPTKPQKIEPQPYSQTYGKAPIWESYDFDWDEDDAKFILPAPHRLTKADEIVLGSKIVKLRTIIETAIKTQNYSALPEAVFELDKAAYEAGLEGFLQRVKSKKQGPKKLQRAPEDQGAQNYHSLDAWKSLLEPPRERRCVPANFPLLGHLPINRPIFDDKKPRDDLLGLLPEPTWHAFEEYGPTTWGPQAFVKSFDKFFYAEPIDFFSEYPQLCAFADWATYREFRYLEDTRVIHITATEKNTDSTPAYPKMNYFDTEEDYLEAHGWAPYIREFTRVFKGDKPEVLWYLFLKKEIIKEEKIRNSDIRQIVCADPIYTRIGACLEAHQNALMKQHTDTSVGQCGWSPMEGGFKKTMQRLVNKGNKHFIEFDWTRYDGTIPPALFKHIKEIRWNFINKDQREKYRHVHEWYVDNLLNRHVLLPSGEVTLQTRGNPSGQFSTPMDNNMVNFWLQAFEFAYFNGPDKDLWKTYDTVVYGDDRLSTTPSVPDNYEERVITMYRDIFGMWVKPGKVICRDSIVGLSFCGFTVNENLEPVPTSPEKLMASLLKPYKILPDLESLHGKLLCYQLLAAFMAEDHPFKVYVEHCLSRTAKQLRDSGLPARLTEEQLHRIWRGGPKKCDG", - "output": "host cell membrane ; membrane ; ATP binding ; cysteine-type peptidase activity ; RNA binding ; RNA-dependent RNA polymerase activity ; serine-type endopeptidase activity ; serine-type exopeptidase activity ; DNA-templated transcription ; proteolysis ; viral RNA genome replication" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MTQPLFLIGPRGCGKTTVGMALADSLNRRFVDTDQWLQSQLNMTVAEIVEREEWAGFRARETAALEAVTAASTVIATGGGIILTEFNRHFMQNNGIVVYLCAPVSVLVNRLQAAPEEDLRPTLTGKPLSEEVQEVLEERDALYREVAHIIIDATNEPSQVISEIRSALAQTINC", - "output": "cytoplasm ; ATP binding ; magnesium ion binding ; shikimate kinase activity ; amino acid biosynthetic process ; aromatic amino acid family biosynthetic process ; chorismate biosynthetic process ; phosphorylation" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MKLQLVAVGTRMPAWVTTGFEEYQRRFPRDMAFELIEIPAGKRGKNADIARILQKEGEQMLAAIPKGNHIVSLDLPGKNWTTPELATQLNRWQLDGRDVSLLIGGPEGLAPACKQAANQSWCLSALTLPHPLVRVLVAESLYRAWSINNNHPYHRE", - "output": "cytoplasm ; rRNA (pseudouridine-N3-)-methyltransferase activity" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MAKIVKFGDEARQKMLAGVNVLADAVKTTLGPKGRNVVLDKSFGAPTVTKDGVSVAKEIELEDKFENMGAQMVKEVASKASDDAGDGTTTATVLAQAIVNEGLKSVAAGMNPMDLKRGIDKAVNAAVAHIKSIAQPCEDGKSIAQVGTISANSDSHVGDIIAEAMAKVGKEGVITVEEGSGLENELDVVEGMQFDRGYLSPYFINNQESMSVEIEQPYILLVDKKISNIRELLPVLEAVAKSGKPLVIVAEDVEGEALATLVVNNMRGIVKVTACKAPGFGDRRKAMLQDIAILTGGTVISEEVGLDLESATLEHLGSAKRVTMTKENSTIVDGAGVAADIESRVAQIRAQIEETSSDYDREKLQERVAKLAGGVAVIKVGAMTEVEMKEKKARVEDALHATRAAVEEGVVPGGGTALIRAAAAIADLKGDNEDQNAGIGIAIRALEAPLRQIVSNAGGEASVVADKVKNGEGNFGFNAASGEYGDMLEFGILDPAKVSRTAIQAAGSIAGLMITTEAMIADKPSEGGAAAPDMGGMGGMGGMGGMM", - "output": "cytoplasm ; ATP binding ; ATP-dependent protein folding chaperone ; isomerase activity ; unfolded protein binding ; protein refolding" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MSGRGKSGKARTKAKTRSSRAGLQFPVGRVHRFLRKGNYAKRVGGGAPVYMAAVLEYLTAEILELAGNAARDNKKSRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKTAKSS", - "output": "nucleosome ; nucleus ; DNA binding ; protein heterodimerization activity ; structural constituent of chromatin" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MNSFRKTCAGALALIFGATSIVPTVAAPMNMDRPAINQNVIQARAHYRPQNYNRGHRPGYWHGHRGYRHYRHGYRRHNDGWWYPLAAFGAGAIIGGAISQPRPVYRAPAGSPHVQWCYSRYKSYRASDNTFQPYNGPRKQCRSPYSR", - "output": "plasma membrane ; carbohydrate binding" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MSRQKKSRNIVDVMPQRKSDKSQISPASYARPSKKLTRYELDAKAREDKKKKKHKGLTSGSRHSRSEQHNNQQMQEKRDPRLGSRKKVPLVVEFVNNPEKGQFIQPVQVQPAEEKVKKLDPMLELEQLENNECLNQLLDALDEGKTISAEDQKFVDECLDRIAQLMDELGIEDEEESEDDLLRTFEKIDINQFK", - "output": "GTPase activator activity ; ribosome biogenesis" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MAYQKVECQFNGQTLTLETGKMARQADGAVVVSFGGTKVLCTAVSAKQMREGQSFFPLTVNYQEKFYAGGKIPGSFFRRERGATERETLVCRLIDRPLRPLFPKGYMFETQIMPTVISVDEQNDPDTLAMVGASAAIAVSDIPFDGPVAAVRVGRVEGNLIANPTIEQRAESDMDIIVSGSRDAIIMVEGETRFISEQEMLDALFFAHEAIQPLIDVQLELVKIAGKEKREFSVPEIDPAVVEKVAELAETRLSEAVKIRTKQDRYAAVAEIKTEILETLAADFEDQEDDISEAFGNLQKRLVRQMVARDKVRIDGRDKNTIRPITCEIGLLPRAHGSALFTRGETQALVAAALGTSKDEQRMDNVQSMEFKKFMLHYNFPPFCVGETSMRLFPGRREIGHGMLAERSIAQVLPNHDDFPYTLRVVSDILESNGSSSMASVCGASLALMDAGVPVSEAVAGIAMGLIKEGDDIVVLSDILGDEDHLGDMDFKVTGTREGITALQMDIKIKGVSKEIMQQALEQAREGRLHILDKMAEAITAPRSDLSPYAPRITTIQVKPDQVRTVIGPGGKNVRGIIEATGCAIDIEDDGRINIASADGDACKAAIKMIRNLTQEAVVGKLYMATVKKIMEFGAFVEIFPGTEGLVHISELAKERVKKVTDILQEGDQVLVKCLDIDRQGKIKLSRKEALGQSLPEEG", - "output": "cytoplasm ; magnesium ion binding ; polyribonucleotide nucleotidyltransferase activity ; RNA binding ; mRNA catabolic process ; RNA processing" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MRASRFLFATLRETPNDAEVISHQLMLRAGMIRKLASGLYTWLPMGVRVLNKVEAIVREEMNRSGALEVFMPVTQPASLWEESGRYVQYGPELLRFKDRHDNPFVLGPTHEEVITDLARNELKSYKQLPINFYQIQTKFRDEIRPRFGVMRSREFIMKDAYSFHVDQASLQETYDNMYDTYCRIFTRLGLDFRPVQADTGSIGGSGSHEFHVLADSGEDDIVFSTESDYAANVEKAEAVLVGERAAPAQALSIVDTPNQKTIADVCTFLNADPKQSVKALLVQGNADEKGNVPVIALFLRGDHELNEIKAEHHPLIAAPLTFATEAQLQELGLTAGYVGPQGLVEKGLTVIVDRAASVLSDFIAGANEADKHATGVNWERDAKFSEIYDLRNVVDGDPSPDGQGVLQIKRGIEVGHIFQLGQKYSEALNCTVLGDDGKPLVVTMGCYGIGVTRVVASAIEQNYDDKGIIWPSAIAPFEIAIVPMNAHKSPKTLEAAEALYAELQAQGYDVLLDDRNERPGVKFSDLELTGIPHRIVIGEKGLDAGTFEYKGRTDAESVNLTKDELLAKLK", - "output": "cytoplasm ; aminoacyl-tRNA editing activity ; ATP binding ; proline-tRNA ligase activity ; prolyl-tRNA aminoacylation" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MKHIPVLEDGPWKTVCVKELNGLKKLKRKGKEPARRANGYKTFRLDLEAPEPRAVATNGLRDRTHRLQPVPVPVPVPVPVAPAVPPRGGTDTAGERGGSRAPEVSDARKRCFALGAVGPGLPTPPPPPPPAPQSQAPGGPEAQPFREPGLRPRILLCAPPARPAPSAPPAPPAPPESTVRPAPPTRPGESSYSSISHVIYNNHQDSSASPRKRPGEATAASSEIKALQQTRRLLANARERTRVHTISAAFEALRKQVPCYSYGQKLSKLAILRIACNYILSLARLADLDYSADHSNLSFSECVQRCTRTLQAEGRAKKRKE", - "output": "chromatin ; cytoplasm ; nuclear speck ; nucleoplasm ; nucleus ; DNA-binding transcription factor activity ; DNA-binding transcription factor activity, RNA polymerase II-specific ; DNA-binding transcription factor binding ; E-box binding ; protein dimerization activity ; anatomical structure morphogenesis ; cell differentiation ; formation of primary germ layer ; myoblast proliferation ; negative regulation of DNA-templated transcription ; negative regulation of endothelial cell proliferation ; negative regulation of gene expression ; nervous system development ; positive regulation of DNA-templated transcription ; positive regulation of endothelial cell differentiation ; positive regulation of endothelial cell migration ; positive regulation of miRNA transcription ; positive regulation of transcription by RNA polymerase II ; SMAD protein signal transduction ; tube formation" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MKKVYHYIIHYVRTYLLLELLAGLWLTVKYFFRKKITVQFPEEQTPLSPRFRGLLALRRYPNGEERCIACKLCEAVCPALAITIESEQREDGSRRTTRYDIDMFKCINCGLCEESCPVDSIVVTPIHHYHISERGQNIMTKEKLLAVGDLMETQLAADRAADEKYR", - "output": "plasma membrane ; 4 iron, 4 sulfur cluster binding ; iron ion binding ; NADH dehydrogenase (quinone) activity ; quinone binding" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MFQIPVQNLDNIRKVRKRVKGILVDIGLDSCKELMKDLKSFDPGEKYFYNTSWGDVSPWEPSGKKARYRTKPYCCSLCRYSTKVLTSLKNHLHRYHEDEADQELMIPCPNCPFSSQPRVVGKHFRMFHAPARKVQSYTVNILGETKTSRSDVISFTCLKCNFSNTLYYSMKKHVLVAHFNYLINSYFGLRTEETGEQPKASDPVSVDKILPFDKYYCKKCSAIASSQDALMYHILTSDAHRDLENKLRSVISEHIKRTGFLKQMHIAPKPVTHLALPPNSSAPSIAAPPPCFQLALPQNSQSSGTVQSVTVTPGTSGSLTHSPPTTAQSHVALVSSSLPVCQSSLSLQQSAPPPVFLSHSVALNQPVNTAVLPLTQPVGPVNKSVGTSILPVNQAMCSVNQAVRPGLLPLTKPMGPMNRPVGPAVLPMGPSVNSGVLQATSPGVISVGRAVPSGVLPAGQVTPAGVIPGQTATSGVLPTGQVVQSSTLPVGQTAPSRGLPPGQTVPLRVLPAGQVVPSGLLSSNQTVPSGVVPVNQGVNSGVLQLGQPVTPGVLPVGPPVRPGVLQLSPSVSTSILPMSQPVRAGTSQNTTFFTSGSILRQLIPTGKQVNGIPTYTLAPVSVTLPVPSGGGLAAVGPPPQVPVQFLPSGSGTQMGSSLPSLPSPQVLVSPAPSVFVQATPPLADANQALKQAKQWKTCPVCNELFPSNVYQVHMEVAHKQSEAQLCQVCNELFPANVYQVHMEVAHKQSESKSSEKLEPEKLAACAPFLKWMREKTVRCLSCKCLVSQEELMHHLLMHGLGCLFCPCTFHDVRGLVEHSRTKHLGKKRLSMDYSNRGFQLDLDANGNLLFPHLDFITILPREKLGEREVYLAILAGIHSKSLVPVYVKVRPQPEVAPKIPNKQKLTCPFCLSTFMTADAYELHLKERHHVMPTVHTMLRSPAFKCIHCCGVYTGNMTLGAIAVHLLRCRSAPKDSSSDLQVQPGFIESSELLMVNGDVIPESTFPVKRKLPEGHLGPEDQRDGEEPQLTLDADASSGSEKGLGAVPLKRQKSEIRTEGSGPSEDSLQALALDPSKYEGRSYEEKKQFLRDYFHRRPYPSRKEVELLSSLLWVWKIDVASFFGKRRYICMKAIKTHKPSVLLGFDMSELKNVKHRLNFGECESQKL", - "output": "nucleus ; DNA binding ; metal ion binding ; cellular response to oxidative stress ; cellular response to retinoic acid ; negative regulation of cell death ; neuron differentiation ; positive regulation of cell growth ; regulation of gene expression" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MMDFLKRFFGSSQERILKRFQKLVEEVNACDEKFSSLSDDELRKKTPQLKQRYQDGESLDKLLPEAYGVVKNVCRRLAGTPVEVSGYHQQWDMVPYDVQILGAIAMHKGFITEMQTGEGKTLTAVMPLYLNALTGKPVHLVTVNDYLAQRDCEWVGSVLRWLGLTTGVLVSGSPPEKRKAIYQCDVVYGTASEFGFDYLRDNSIATRKEEQVGRGFYFAIIDEIDSVLIDEARTPLIISGPGEKHNPVYFELKDRVAELVYFQREMCNHIAIEARKVLDPFLGTDVLPKDKKVMEAISEACRALWLVSKGMPLNRVLRRVREHPDLRAMIDKWDVFYHAEQNKEQCLEKLSSLYIVVDEHNNDFELTDKGMLQWIEKIGGAAEDFVMMDMGHEYALIEEDATLSPADKLNRKIAVSEKDTQRKARAHGLRQLLRAHLLMEKDIDYIVRDDQIVIIDEHTGRPQSGRRFSEGLHQAIEAKEHVTIRKESQTFATVTLQNFFRLYEKLAGMTGTAITESREFKEIYSLYVLQVPTFKPCLRIDHNDAFYMTEREKYQAIVAEIISAHRSGKPILIGTESVEVSEKLSRILRQNRINHTVLNAKNHAQEAEIIAGAGKVGAVTVATNMAGRGTDIKLDEEAVAAGGLYVIGTSRHQSRRIDRQLRGRCARLGDPGAAKFFLSFEDRLMRLFASPKLNTLIRHFRPPEGEAMSDPMFDRLIETAQKRVEGRNYTIRKHTLEYDDVMNKQRQTIYAFRNDVLHAEDLFVVAKEQIEHVALALAFLILKDAHADHCSLPKIEEWLSYSFPVKLDDQEIRRLGDVDAVADYIGDLLIEAFDVKFSAMLAEFTEIIGSAANAQGICNDILRSVIISHIDEEWKVHLVDMDLLRSEVGLRSVGQKDPLIEFKNESFLLFEGLIRDIRIAIVKHLFALELSLTRSDRPDNAIPTVATAFHNHDNFRPMELTIVGEEEES", - "output": "cytoplasm ; plasma membrane ; ATP binding ; protein-exporting ATPase activity ; intracellular protein transmembrane transport ; protein import ; protein targeting" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MSTISATVAGPSIVQFVQIDSLVVMKIVKHVDSEMYAGLNEVAGEACQGLLTGLVSIDDRRLEITNCFPTARAEPMLDGDEIAQNNAFYEEQKQAEMLDMLRKFRDMNIDYELVGFYQAHPFGACFAQETIDSLIDYQASVPDGVVLIYDPVKTRQGQLSIRAYRLSTKALEMSLDGDWSPESTRTAGLTYENMLEELPVVIKNSHLVNVMLAELALEGDCAIQRSSSHLELGTRRSLEKCLRSLMSDVDDLNRTVMAYTKYVADKQRYDLTVYNAMQKRQAENEQREARGEPPLSFDDIKKMKPPQLTTKCGMLESFLCSSDARAHSDYAAEACLRHFSFSSFCLCFFNENIAKLFLAEAVVDSHGSRDHGGAAASVR", - "output": "eukaryotic 43S preinitiation complex ; eukaryotic 48S preinitiation complex ; eukaryotic translation initiation factor 3 complex ; metallopeptidase activity ; translation initiation factor activity ; formation of cytoplasmic translation initiation complex" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MTTNTVSRKVAWLRVVTLAVAAFIFNTTEFVPVGLLSDIAQSFHMQTAQVGIMLTIYAWVVALMSLPFMLMTSQVERRKLLICLFVVFIASHVLSFLSWSFTVLVISRIGVAFAHAIFWSITASLAIRMAPAGKRAQALSLIATGTALAMVLGLPLGRIVGQYFGWRMTFFAIGIGALVTLLCLIKLLPLLPSEHSGSLKSLPLLFRRPALMSIYLLTVVVVTAHYTAYSYIEPFVQNIAGFSANFATALLLLLGGAGIIGSVIFGKLGNQYASALVSTAIALLLVCLALLLPAANSEIHLGVLSIFWGIAMMIIGLGMQVKVLALAPDATDVAMALFSGIFNIGIGAGALVGNQVSLHWSMSMIGYVGAVPAFAALIWSIIIFRRWPVTLEEQTQ", - "output": "plasma membrane ; carbohydrate transmembrane transporter activity" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "RPADFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDCETDREITRQQGEKFAHEITGMRFCEASAKDNFNVDEIFLKLVDDILKKMPLDILRNELSNSILSLQPEPEIPPELPPPRPHVRCC", - "output": "autophagosome ; endosome ; Golgi membrane ; lysosomal membrane ; lysosome ; plasma membrane ; recycling endosome membrane ; synaptic vesicle ; trans-Golgi network transport vesicle ; GDP binding ; GTP binding ; GTPase activity ; autophagy ; endosome to lysosome transport ; Golgi vesicle fusion to target membrane ; protein catabolic process ; protein localization to plasma membrane ; protein secretion ; Rab protein signal transduction ; regulation of exocytosis ; vesicle docking involved in exocytosis" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MQQILEHIVGIANDLLWSKLLIVLLLSFGIYFTFRLKFLQVRMLKEMVRVLREGAASRSKNSISPFQAFCISMAARVGTGNITGIAIAIALGGPGAIFWMWIIAIIGSASSFVESTLAQIYKVKDVNGFRGGPAYYMEKGLNKRWMGALFAVLITLSFGIVFNSVQSNTVSLAFENAFGTNRLTLGLILIAVFGTIIFGGVKRIAKLAESIVVVLAVLYIGVAFFVIFSNITQLPGVLALIVKNAFGFDQAAGGALGAALMQGVRRGIFSNEAGMGSAPNAAATATTSHPVKQGLIQAFGVLTDTLVICTSTAFIILFSDAYHTPGLSGIALTQASLSSHVGSWASGFLAILILLFGFCALIGNYYYGETNIGFLNKSKKLIFVYRIGVLAMIVFGCVAKVQLVWDLADLFMGLMVIVNLIAIFLLSKVVFTALKDYTRQKKAGKDPVFYKDVLKNHNGIECWPVSDTKTDTHNKQIS", - "output": "plasma membrane ; amino acid:sodium symporter activity" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MVKQVSDSSEFKSIVCQDKLVVVDFFATWCGPCKAIAPKFEQFSNTYSDATFIKVDVDQLSEIAAEAGVHAMPSFFLYKNGEKIEEIVGANPAKLEASIKANL", - "output": "cytoplasm ; cytosol ; nucleus ; antioxidant activity ; protein-disulfide reductase activity ; cell redox homeostasis ; cellular detoxification of hydrogen peroxide ; cellular response to reactive oxygen species ; hydrogen peroxide catabolic process ; L-methionine salvage from methionine sulphoxide ; sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MRLVFAGTPAVALPSLRALLDSPRHQVVAVVTRPDRPAGRGRHQRSSPVRELADERGLEVLAPARASDPDFLARLGEIAPDCCPVVAYGALLPRPALDIPKHGWVNLHFSLLPAYRGAAPVQRAVLAGEDMTGASVFEIEPALDSGPVYGVLTERIRPTDTSGDLLDRLAVAGARLLEAVMDGIEDGTLQARPQPSDGVSLAPKLTVEDVRVDWSAPAAAVDRLVRAATPAPGAWTTFRDRRVKLGPVRPAPAGHPPLPSGRLAAPERGLVLVGTATTPVVLDEVRPEGKAPMPAADWIRGLRPGTDEAFA", - "output": "methionyl-tRNA formyltransferase activity" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MEKLSEKDKELIRGSWESLGKNKVPHGVVMFSRLFELDPELLTLFHYTTNCGSTQDCLSSPEFLEHVTKVMLVIDAAVSHLDDLPSLEDFLLNLGRKHQAVGVNTQSFAEVGESLLYMLQCSLGQAYTAPLRQAWLNLYSIVVAAMSQGWAKNGEDKAD", - "output": "cytoplasm ; perikaryon ; heme binding ; metal ion binding ; oxygen binding ; oxygen carrier activity" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MEQTLAQAVSRRGKTNTPMAEERKPFSPMNFSANFVAPELFYSANVRKIKNIFRERSTTRFLDAISSDFELVAFLTLSPAHLMQLETTLRQEIRSCVVPIVTSDASFETVAVIKTALDGMRFHFGHTTLEKGWMSMMRHAESCLQESSSSAVNDLQMQIKRVGSLLLSGKNRVESCELSVLNLTARRFRIEYGLNGTYFGEHVAMLLDLKRYIYGTVPKEFCWAKTKKHSLFTTPKWIKRTPIDCFLFCLRVIPILHRFGVAISLLYWSCVAALNFPAFMAFLFKRQFAKYLAHSFAKHSIYFIFLTIIAILWSFRTFASQKPKIVLQARSTAEKEKKLMMILASVVGITYLFDYDIAEALGNCLHKISRLSSYLLDDHQGIASRMFGASYGLQAGDSAEDAVTTIISDLLSVTFKIVDEDASQGTVEDASETTFHSWVGVNTLAGRNMSRPLQYDVNKTYALTPQNVQLQARAMADANNCWSMVVGHTGSGKSTYLPVQYSNYLSTKSDRRQQILICEPTQAATENVCAGVAANLGRAVYGRHEGWSRMGDHCIQVMTYGSALQCHAMDPSFISTFDAIFLDEAHDVKEHSLVFESICDTFKSVRKFYVSATPRDGSVCPEAARKYPLHVETSVCDSYRKFIAAQGGGDLLDISKHDTALVFLAGRPECIKAANAWNASVTGEKRAFPLSSDNFATDFSMLTERLKTHKTIIFTTNIIETGVTLSVDCVVDFGHTMRPCLDLNQKSLRLDRRRVTRNERQQRIGRAGRLKDGYAIVCGDVDRAVNVISPDVLYGAALLSFKHNVPFYMNETFESSWLEGVTKAQADTMTIFKLPIFLTRDLINADGSVAREFLDVLKKHQFTTSDIKQAPSVTAKHIFPTWASYFSLHQALHYGDDKDEIPHELRYARVPFSVTTLSKFDWPALALACEKHRASMSNVFAGIEEPARVVTLQTNPANIQASITHLTHMSKNYKTLIENNQHVRQSMMTNVMFKWFSSTRITKDLDRNLRRCTDNLSVVEATLSSLRQILAGNTQVHATPHMQSTLEDIIELQASDTLTEESLANALGIFVPKCNLFLLLATKGFKLVYVVCILLLVNLVYTGLRKWREHLKQKGSNEILTNTMPVSEGGEILAEVMKMEPKMRKNIKRDMDAAVESKLCGFTFVFPDDDKIGLEGKGNKYRPREDARLMYSTREDATFDAWNEKAKERRKKVTDKAEPELRRAYEKRPYFNFYDLQTDSNILEAIFYTTEGDEFFRTADPNRDMNLVADKLRSFLDTKLVVGHHQRKLLEETANVVIKDTKGTAHKMEISQHDPDFLKQNGSGKVGYPEHRGQFRQEGVAVTGDYDLEAEFGTDTDEISFGASTGILLSQVGVDVATRVGRICIGTFNMNCYFYSDWILVPGHLQDRSGNVTIQFPDQTVQTTTDALNANGVKRFYGLDVIAIRRPAILRPRTKLVKAFAIEEPVIAQMVFVDAQGVRKFTQSDWARKEENSGRWSHKISTVLGMCGCPVLDVGKNRLIGIHVATNYTKKRNEFQPFTQEVVDFINGPGTKIPYCPWVFDRPACGYSSHNALFEKPTTLADVIHMQASDGLHNINNAIEGFGSSLKGQLVSPPTESTRQRFDKLFGSGSFELIGQMNKGLIDKHVIVGENDDVYDFMREHPTFTWLKDFMNEYAPSVLSYSAYYKDLCKYNRAKHVLTYNPEELHCATKGLIKMLEDAGLTQGSVRTPQQVVSDIQWNTSAGPSYQGKKRDLCAHLSDDEVLHLAEVCRQQFLEGKSTGVWNGSLKAELRTIEKVEAEKTRVFTASPITSLFAMKFYVDDFNKKFYATNLKAPHTVGINKFGRGWEKLHDKLNRPGWLHGSGDGSRFDSSIDPFFFDVVKTIRKHFLPSEHHKAIDLIYDEILNTTICLANGMVIRKNVGNNSGQPSTVVDNTLVLMTAFLYAYIHKTGDRELALLNERFIFVCNGDDNKFAISPQFDEEFGHDFSPELVELGLTYEFDDITSDICENPYMSLTMVKTPFGVGFSLPVERIIAIMQWSKKGGVLHSYLAGISAIYESFNTPKLFKSIYAYLLWLTEEHEAEILAAMTQSSTALPIPSMLDVYRLHYGDDEIWLQAADPLTDAQKEAAHTAAADRARLDLADADRRRKVEADRVEAARVKKAADAVLKPVTLTATRMPTEDDGKLKTPSGARIPSSAADGNWSVPATKQVNAGLTLKIPLNKLKSVPKSVMEHNNSVALESELKAWTDAVRTSLGITTDEAWIDALIPFIGWCCNNGTSDKHAENQVMQIDSGKGAVTEMSLSPFIVHARMNGGLRRIMRNYSDETVLLITNNKLVAHWSMKHGASANAKYAFDFFVPRSWMNPQDIEVSKQARLAALGTGTYNTMLTSDTTNLRKTTNHRVLDSDGHPELT", - "output": "helical viral capsid ; host cell cytoplasmic vesicle ; ATP binding ; cysteine-type peptidase activity ; helicase activity ; hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides ; RNA binding ; RNA-dependent RNA polymerase activity ; structural molecule activity ; DNA-templated transcription ; proteolysis ; RNA-protein covalent cross-linking ; viral RNA genome replication" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MVLNLDTENRKMQDGNNDDDFDLEVQIPNSIFEKLKSIEALKARESPMCVSGKDDSIPTCDQNSTPGMITQRSCVYGGARVVLMPITDAVHLVHGPIGCAACTWDIRGSKSTGDKLYKNGFSTDLQEKDIVFGGEKKLYESILEVNKLYHPGAIFVYSTCVVGLIGDDLKAVCRQAQEATGCRVIPVQSEGFKSFNKTAGHKLACDAMLDYVIGTEEPEEEHPYSINIIGEFNVAGDLWGIIPLYEKMGVKVHTAITGDSTVAKVASAHRSKLNIVQCPKSSNYLAAQMDKKYGIPSFKVNFFGLDETTKSLRAVAEFFGDEEMIKRTEELIKSEIKNLRDEISEYQKDLSGRTVAIYSGAHKSWALVSAFGELDMEIIMSGTQNGKPEDYQQIRDHVCEGTLIVDDASSMELVQLLKEYKPDILISGAKEKYLSLKSGIPHCDFNHDRITAFSGYQGFINFARVVHTAVMTPIWRLSRKMMI", - "output": "nitrogenase activity ; nitrogen fixation ; protein-containing complex assembly" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MFIDKGASPLPIREAKMQKTAYYENSGLFGGYTYAKPESYSYGPSQQQYPQSSLDNDYPSTACSVQPAAIRAPNHKTNDISNSCMRTTSSQNSNQTPSISNQQHQAPSLPPSSPSHSNTSAQKKSKSSNSSGSSQSTMNKQIFPWMKESRQNSKQKNSSSTPPAGENCEEKSPTGPSSKRVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKGIMHSPTGQSPDRSPPLSGPNLVGYSSQLPTVNSLSYDAPSPTSFAKSQQNMYGLAAYTAPLSSCLPQQKRYPGAEYEHHTMQGNSGFANPNLQGSPVYVGGNFVDSMPASGPMFNVGHLSHPSSASVDYSCAAQIPGNHHHGPCDPHPTYTDLSSHHTTQGRMQEAPKLTHL", - "output": "nucleus ; DNA binding ; DNA-binding transcription factor activity, RNA polymerase II-specific" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MVNEIDSESLSQRLADTEDVLLVDIRTPAEIAQGMIPDALQLPMHLIPIRMSEIPKDRDVVIYCRSGARSYQACAYLMQQGYGRVLNLRGGIIAWARHGLPIVAPEG", - "output": "cytoplasm ; transferase activity ; sulfur compound metabolic process" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MDFVIQWSCYLLAFLGGSAVAWVVVTLSIKRASRDEGAAEAPSAAETGAQ", - "output": "plasma membrane" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MEEGSNKREGLPPQLLDLIPDEKEWKLREALGLGRSRNAGFDGEEDKKLDLKLGLPGFIEDDEAETLRDYRLQQESPSLSLSFFPKHSKTTSSTTTTTGAKRGFIDTVEDKTEGYNDQKQQARAGCGKELAVEEMIAAVSERKKGCCPPPPPPHGAPATPARNRPQTQGRGAAAPVVGWPPIRSFRRNLASSSSSKHSPEPQNDNANAKVTLTCKKNPLVKINMDGIPIGRKIDLAAYNSYDGLSSAVKQLFHGFLQAQKDQTNAQIAQQGADDKIFYQLLDGSGEYTLVYEDSEGDRMLVGDVPWKVFVSTAKRLRVLRSSELSHTLIGATARV", - "output": "nucleus ; auxin-activated signaling pathway ; regulation of DNA-templated transcription ; regulation of translation ; response to auxin" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MATDELASKLSRRLQMEGEGGGEAPEQPGLNGAAAAAAAAGAPDETAEALGSADEELSAKLLRRADLNQGIGEPQSPSRRVFNPYTEFKEFSRKQIKDMEKMFKEYDAGRDGFIDLMELKLMMEKLGAPQTHLGLKNMIKEVDEDFDSKLSFREFLLIFRKAAAGELQEDSGLHVLARLSEIDVSTEGVKGAKSFFEAKVQAMNVSSRFEEEIKAEQEERKKQAEEMKQRKAAFKELQSTFK", - "output": "membrane raft ; calcium ion binding" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MSTNLSNAEILNNLLEGRDLDELTSRALMQRWLNDEISDVETGAFLSALRAKSSTGVELSSMAKELLNVCELPVARPNLYLVDTCGTGGDGANTFNISTAVAFVAASCGVKIAKHGNKSASGKVGSADVLLNLGLNLNCSLEKVINAVSEIGITFLFAPVWHKSLIKLAPLRKTLGIRTVFNQLGPLVNPLRPNAQVLGVASEDLLQPMGSALLNLGMNRAIVVHGSGGLDEASLQGKNKLVFIENGELRFSEINISDFNHENIANENLVVSDLDSNEEILKSVLNGSGQKSHMDVVALNVSLVLWAAGIEDNLNEGFNKALFSINKGDPWKKFLLLKNYLSAN", - "output": "anthranilate phosphoribosyltransferase activity ; magnesium ion binding ; tryptophan biosynthetic process" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MRPSRRAPDELRAVSLERGVVKYAEGSCLVKFGDTHVLVTATLEERLPPWLKGQGRGWVTAEYGMLPRATLERTRREAAAGKQNGRTVEIQRLIGRSLRAIVDLQALGERQITVDCDVLQADGGTRTASITGAWVALADCLGWMKTRNMIKGTVLRDNVAAISCGIYNGTPVLDLDYAEDSEAETDANFVMTGDGRIIEVQGTAEKTPFSQDEFLALMALAQKGVTRLVDLQKMAVA", - "output": "3'-5'-RNA exonuclease activity ; phosphate-dependent exonuclease activity ; tRNA binding ; rRNA catabolic process ; rRNA processing ; tRNA processing" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MAMLRVQPEAQAKVDVFREDLCTKTENLLGSYFPKKISELDAFLKEPALNEANLSNLKAPLDIPVPDPVKEKEKEERKKQQEKEDKDEKKKGEDEDKGPPCGPVNCNEKIVVLLQRLKPEIKDVIEQLNLVTTWLQLQIPRIEDGNNFGVAVQEKVFELMTSLHTKLEGFHTQISKYFSERGDAVTKAAKQPHVGDYRQLVHELDEAEYRDIRLMVMEIRNAYAVLYDIILKNFEKLKKPRGETKGMIY", - "output": "cytoplasm ; cytosol ; extracellular exosome ; nucleoplasm ; proteasome activator complex ; proteasome complex ; endopeptidase activator activity ; antigen processing and presentation of exogenous antigen ; positive regulation of endopeptidase activity ; regulation of G1/S transition of mitotic cell cycle ; regulation of proteasomal protein catabolic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MKKFSSKTIKAKNSVKMTALSTRAIAANLILQVLDEGKSLSALIPEVQLSVKAQDLPLLQEICFGVCRVLPRLEQIIKRLVDKPLKGKTRIVHCLLLVGLYQLLYMRVPAHAAVDEVVNATKSLKSDSFRGLVNAVLRRFLREQDEILAIIDKNWQTLHPEWFVNKLKKAYPNWREIIEANNQKPPMWLRVNSQKNALETYRTLLEEQGVSSKTSHHPNALCLDIPIAVQKLPHFEEGAVTVQDLSAQWAATLLEPKNEEWILDACAAPGGKTTHILELAPQANVIALDVESHRLKRVEENLERLNQQAIVVCGDASKPDEWLAEIGKSAAKFDRILLDAPCSATGVIRRHPDIKWLRKETDIAQLVELQKKILSALWEKLKPNGVLLYATCSVLPEENCEQIQAFLNAHADAELLSLPFSDDKSAVGFQFIPQPNSGDGFYYAKLLKRAS", - "output": "cytosol ; RNA binding ; rRNA (cytosine-C5-)-methyltransferase activity ; regulation of DNA-templated transcription ; rRNA base methylation" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MTNIRKSHPLFKIINDSFIDLPAPSSISSWWNFGSLLGVCLAVQILTGLFLAMHYTSDTATAFYSVTHICRDVNYGWVLRYLHANGASMFFICLFLHVGRGIYYGSYTFSETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWVWGGFSVDKATLTRFFALHFLLPFIISAMVMVHLLFLHETGSNNPTGIPSDVDMIPFHPYYTIKDILGLVLMLMALLSLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILVLAVIPLLHTSKQRSMTFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFLIILVLMPLASIAENHLLKW", - "output": "mitochondrial inner membrane ; respiratory chain complex III ; metal ion binding ; ubiquinol-cytochrome-c reductase activity ; respiratory electron transport chain" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MSRKGSTPQRTVLPDPKHGSETIARFINMVMQSGKKSVAEKIVYGAMDVIGEKNPNAIELVQKALDNVAPAVEVKSRRVGGATYQVPVEVRSSRRMALAMRWLIDSARKRGENTMPRKLAAELLDAAESRGGAIKKREETHRMAEANKAFAHYRW", - "output": "small ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; tRNA binding ; translation" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MDYVNVVDGSKKTMNSPEGAAPGLIGATGITNPTPDNDLPLQASNKLTRLSQSTSNDSKLIAAGEPKACDLERSRVGGSCKMTTPGHSNFVLKRDSVEGCPAKNSSMAESNGQTNPMHCRIVPLQSAEGDTNQGFGKNSLEQNNAKGDWVPISQSTVVLGTDGNTSVFPGTLTGDEEGDENKARGNWSNKLDFILSMVGYAVGLGNVWRFPYLAFKNGGGAFLIPYLTMLALAGLPIFYLEVALGQFASQGPISVWKAIPALQGCGIAMLIISVLIAIYYNIIMCYTIFYLFASLVYVLPWASCNNPWNTPDCKDKDRLLLDSCIISSQPNIQIKNSTFCMTAYPNLTMVNFTSHGNKSFVSGSEEYFKYNMLKISAGIEYPGEIRWPLVFCLFLAWIIVYASLAKGIKTSGKVVYSTATFPYVVLVILLFRGVTLPGAGDGIWWFIMPKWEKLMDATVWKDAATQIFFSLSAAWGGLITLSSYNKFHNNLYRDTLIVTCINSATSIFAGFVIFSVIGFMAHILNVDIEKVADQGPGIAFVVYPEALTRLPLSPFWAIIFFLMLLTLGLDTMFATIETIVTSVSDEFPKLLRTHKPLFTLVCCVAFFIMGFPMITQGGIYMLQLVDNYAASYSLVIIAIFELVGISYIYGLQRFCEDIEMMIGFQPSRFWKICWAFVTPTILTFILGFSFYQWEPMTYGSYHYPSWSMVMGWLMLACSVIWIPIMFVIKMFLAPGTFIERLKLVCSPQPDWGPFLAKHRGERYKNMIDPLGTSSLGLKLPPKDFELGTQC", - "output": "plasma membrane ; glycine:sodium symporter activity ; metal ion binding ; neurotransmitter transport" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MSSDLKKINKVKKNSRRISNTQEPKLVERLIKISRVSKVTKGGKKLSFRAIVVVGDENGKVGVGVAKADDVVNAFKKAKTDGRKNLIELPITKALSIPHNVAGNFGACKVIMRPSIEGSGVIAGGAVRIVLEVAGVKNVIAKQLGSNNLLNNARASVCALQNLTTKAQVAKKRNLD", - "output": "chloroplast ; small ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MPRYKTVEQVLSLMKDRTRVRNIGIIAHVDHGKTTTSDTLLAASGIISPKVAGEALALDYLNVEQQRGITVKAANISLYHEAEGKGYVINLIDTPGHVDFSGRVTRSLRVLDGSIVVVDAVEGIMTQTETVLRQSLEERVRPILFINKVDRLVKELKLSPQEMLNRLLDIIRQVNNLIDMYGEPEFKEKWMINPQAGNVIFGSAKDKWGFSLPMAQKKGINMKNVIDAYTASDKSKLEELAAQAPINEALLDAAIKFVPNPIEAQKYRIPKIWKGDLDNELAKAMLNADPNGPIVFMITDMKVDPHAGLVATGRVFSGTLRSGEELWLVNAKTSQRILQVSLYMGPTRELAEEIPAGNIAAVLGLDRARSGETAISVGFSNVQGSFERLHYISEPVVTIAVEPKNPKDLTKMIDALRKLSIEDPNLVVKINEETGEYLLSGMGFLHLEVSLQLLRENYGIDVVTTPPIVVYRESIRAKSQVFEGKSPNKHNKFYLSVEPLNDKTIELISNGTIREDMDSKEMAKILRDEASWDYDEAKRIIAIDENVNVFVDLTSGVQHLREVMDTVLQGFRLAMKEGPLAHEPIRGVKVILHDAVIHEDPAHRGPAQIYPAVRNSIFAGFLTSRPTLLEPIQKLDIRVPADLIGNVTAVITRKRGKILDVSQIANMSRITAEIPVSESYDMASELRGSTGGRAFWGTEFSRWAPVPDSILLDVVTKIRERKGLPKELPKVEDFLS", - "output": "cytosol ; ribonucleoprotein complex ; GTP binding ; GTPase activity ; translation elongation factor activity ; translational elongation" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MKLLNYAFVYRRFLLVVFTVLVLLPLPLIIRSKEAECAYILFVIATFWITEALPLSITALLPGLMFPMFGIMSSTHVASAYFKDFHLLLIGVICLATSIEKWNLHKRIALRMVMMVGVNPAWLTLGFMSSTAFLSMWLSNTSTAAMVMPIVEAVAQQITSAEAEAEATQMTYFNESAAQGLEVDETIIGQETNERKEKTKPALGSSNDKGKVSSKMETEKNTVTGAKYRSKKDHMMCKLMCLCIAYSSTIGGLTTITGTSTNLIFSEHFNTRYPDCRCLNFGSWFLFSFPVAVILLLLSWIWLQWLFLGFNFKEMFKCGKTKTLKEKACAEVIKQEYEKLGPMRYQEIVTLVIFIVMALLWFSRDPGFVTGWSVLFSEYPGYVTDSTVALVAGILFFLIPAKKLTKMTSTGDIIAFDYSPLITWKEFQSFMPWDIAILVGGGFALADGCQVSGLSSWIGSKLSPLGSLPVWLIILISSLIVTSLTEVASNPATITILFPILSPLAEAIHVNPLHILLPSTLCTSFAFLLPVANPPNAIVFSYGHLKVIDMVKAGLGVNILGVAVVMLGMFTWIEPMFNLHEYPSWAPDIVNQTMP", - "output": "apical plasma membrane ; monoatomic anion:sodium symporter activity ; secondary active sulfate transmembrane transporter activity ; sodium:sulfate symporter activity ; sodium ion transport ; sulfate transmembrane transport ; sulfate transport" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MELLCCEGDTVRRAQPDPALLLDDRVLHNLLTVEERYLPQCSYFKCVQKDIQPFMRRMVATWMLEVCEEQRCEEEVFPMAMNYLDRFLAVIPTRKCHLQLLGAVCMFLASKLKETIPLTAEKLCIYTDNSIKPQELLEWELVVLGKLKWNLAAVTPHDFIEHILRKLPLPKDKLLLIRKHAQTFIALCATDFNFAMYPPSMIATGSVGAAICGLQLDVGETSLSGDSLTEHLAKITSTDVDCLKACQEQIESVLVSSLRQTRQQTQQRNSSKSVDELDQASTPTDVQDINL", - "output": "cytoplasm ; nuclear membrane ; cyclin-dependent protein serine/threonine kinase regulator activity ; cell division ; mitotic cell cycle phase transition" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MNYRIDFAVLSEHPQFCRFGLTLHNLSDQDLKAWSLHFTIDRYIQPDSISHSQIHQVGSFCSLTPEQDVINSNSHFYCEFSIKTAPFPFHYYTDGIKAAFVQINDVEPRVRHDVIVTPIALASPYRERSEIPATDAATLSLLPKPNHIERLDGEFALTAGSQISLQSSCAETAATWLKQELTHLYQWQPHDIGSADIVLRTNPTLDEGAYLLSVDRKPIRLEASSHIGFVHASATLLQLVRPDGDNLLVPHIVIKDAPRFKYRGMMLDCARHFHPLERVKRLINQLAHYKFNTFHWHLTDDEGWRIEIKSLPQLTDIGAWRGVDEVLEPQYSLLTEKHGGFYTQEEIREVIAYAAERGITVIPEIDIPGHSRAAIKALPEWLFDEDDQSQYRSIQYYNDNVLSPALPGTYRFLDCVLEEVAALFPSHFIHIGADEVPDGVWVNSPKCQALMAEEGYTDAKELQGHLLRYAEKKLKSLGKRMVGWEEAQHGDKVSKDTVIYSWLSEQAALNCARQGFDVILQPGQFTYLDIAQDYAPEEPGVDWAGVTPLERAYRYEPLVEVPEHDPLRKRILGIQCALWCELVNNQDRMDYMIYPRLTALAGSGLDTKIPA", - "output": "periplasmic space ; beta-N-acetylhexosaminidase activity ; N-acetyl-beta-D-galactosaminidase activity ; chitin catabolic process ; polysaccharide catabolic process" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MENNNRFMPHIRRTTHIMMFAHRNSFDFHFFNAR", - "output": "rRNA binding ; regulation of translational elongation ; transcriptional attenuation by ribosome" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MSTQLRAAEISDIIESRIEKFGIKAEERTEGTILNIKDGIVRVYGLRDVMFGEMVEFPENTYGLAFNLERDSVGAVVMGPYEHLEEGMTARCTGRILEVPVGEALLGRVVDGLGKPIDGKGPIDTSETSPIEKVAPGVITRKSVDTSLPTGLKSIDAMVPIGRGQRELIIGDRQTGKTAIAIDTIINQKHTGVKCIYVAIGQKQSSVAAVVRKLEEHGAMEHTIVVNASASEAAALQYLAPYAGCTMGEYFRDRGQDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDIFYLHSRLLERAAHVNEAYVKEFTKGKVTGKTGSLTALPIIETQAGDVSAFIPTNVISITDGQIYLDVNLFNAGIRPAINAGLSVSRVGGAAQTKIIKKLIGGLRIALAQYRELEAFSQFASDLDEATRKQLEHGQRVMEILKQPQYQPLSVGEMAIIWYVVNNNYLDQVELKKVVDFERSLLSFLRDQHQDLLDEINKNPNYSEKIIEKIKAVVEEFVKTQSY", - "output": "plasma membrane ; proton-transporting ATP synthase complex, catalytic core F(1) ; ATP binding ; proton-transporting ATP synthase activity, rotational mechanism ; proton-transporting ATPase activity, rotational mechanism" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MARRWSTKESQRRGSAWLLLFLAGVYGNGALAELSENVHISGVSTACGESPEQIRAPSGIITSPGWPSDYPAQVNCSWLIRANPGEIITISFQDFDIQGSRRCTLDWLTIETYKNIESYRACGSTIPPPYISSQDHVWIRFHSDDSVSRKGFRLAYFSGKSEQPDCACDQFRCGNGKCIPEAWKCNSMDECGDSSDEEVCASDAHPPTTTAFQPCAYNQFQCLSRFTKVYTCLPESLKCDGNIDCLDLGDEIDCDMPTCGQWLKYFYGTFNSPNYPDFYPPGSNCTWLIDTGDHRKVILRFTDFKLDGTGYGDYVKIYDGLEENPRKLLRVLTAFDSHAPLTVVSSSGQIRVHFCADKVNAARGFNATYQVDGFCLPWEIPCGGNWGCYTEQQRCDGYWHCPNGRDEINCTMCQKEEFPCSRNGVCYPRSDRCNYQNHCPNGSDEKNCFFCQPGNFHCKNNRCVFESWVCDSQDDCGDGSDEENCPVIVPTRVITAAVIGSLICGLLLVIALGCTCKLYSLRMFERRSFETQLSRVEAELLRREAPPSYGQLIAQGLIPPVEDFPVCSPNQASVLENLRLAVRSQLGFTSIRLPMTGRSSNIWNRIFNFARSRHSGSLALVSGDGDEVVPSQSSSRETERSRPHRSLFSVESDDTDTENERRDTAGASGGVAAPLPQKVPPTTAVEATVGSGGNSSAQSTRGGHADGREVSSVEAPSVSPARHQLTSALSRMTQGLRWVRFTLGRSSSTTQNRSPLRQLDTAVSGREDDDDVEMLIPVSDGASDIDANDCSRPLLDLASDQVQGFRQPHSAGNPGVRTSNRDGPCERCGIVHTAQIPDTCLEATVKTETSDDEALLLC", - "output": "clathrin-coated pit ; plasma membrane ; endocytosis ; neuron migration ; neuron projection development" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MIAYIQGSITYKSPTQLIVDVGGIGYELQISLQTYDSLKDIAASCKIFTYLHITQDAHTLYGFSTIEEKQCFLQLLSVNGIGPRVAITILSALTPEALQQAIMTHDTITLQAVKGIGQKAAQRIILELQGKVGKVGNMLSLQPSGQEAIYQEALAALSKLGIHKSTAEKTVAAILKEHQGEITVESLIKLALKG", - "output": "cytoplasm ; Holliday junction helicase complex ; ATP binding ; DNA binding ; four-way junction helicase activity ; DNA recombination ; DNA repair ; SOS response" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "CYFQNCPRGXXXAMSDLELRQCLPCGPGGKGRCFGPSICCGDELGCFMGTAEALRCQEENYLPSPCQSGQKPCGSGGRCAAAGICCNDESCVTEPECREGASFPRRA", - "output": "extracellular region ; neurohypophyseal hormone activity ; vasoconstriction" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MQATAALETDSDKNYPKNGGHFQNDKLYNPKKENMFFSNGCNGVILAFPDGKEDSLATEERASDKENSIVDQRDLSELSFSENQDSNRGNIFSQSSEFEDSNDYAFLNETYSIHYSESKLKDENLLHLYSGLHPEVHKRVEMIFDTLDNNSIGLGRSAEASGADCGDVQKSDVDEDSQQEYHSAELECISAHLAKTVSRSSLDVSELKTSSYDFKCGGNFEDNHGKLESGPSPSLESLNGFAQECSLQVSTSQSSDMLQEYHEPKYEKCKEQEVDLTYHKAFDGILQRSSSPLNHQKVPETQVYTKEVKSQTTESKDFYGNRIFQNKALQRPENATMFPQDRALETHLKANDAHQPSGPCALDDSVISLCGSSQYKSLPEPGFFSPVIPRVAVTDYQAEVEGSCLHHVQGSATNKACSLMKEVCLTSVPDAAACIAAVQQTLHVSSRVNASSSIVSASSITETKMVRQSQAEEWQSDKRSVACNTAWSCGQQCRDAQRAAPGSDSGRPLSTGCLKPSGNSLNENSLELRKVFDTTDRQKHCNRAFQLCEEKAVPSRCCQKTTERAIKAEMHLLDVCYQMCHRHCHHIYKLVMESRAGLNRNLQTDSAKKELGAALLSVLEDLKLRYMNLKGKVHKGIPLEELPPLSVESKLLSAFSDFVSRLMKDEACSLSGANSELDNQSLPDVDVSPGLLKTLSQMSFIPDSSQPEQGKSPMSDVCKNGDTDIGFNCLKLNDKECKTVQEASEDWFDATERLIGADFSETQDSTAECEEWQPRNPLELKNSELHGKGQGFLIHVGGLCPSVSEADLRSHFQKYQVSEISIYDSTNYRYASLAFAKNSNAKMAVKEMNGVKINGKSVTVRLVKIPGEYTPPPLSTTGNSTSMNHLEKNTNKDATSASSICRLPRAKSRQLESEQDSEFPPLDQGVKKNCNQMKSGQLLPETPFQFIPPNTLNLRSFTKIMKRLAELHPDISRDHIIEALQEVRINHKGFLNGLSINTIVKMASSFLRNSALK", - "output": "cytoplasm ; intercellular bridge ; protein homodimerization activity ; RNA binding" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MGNSSATEDGGLLAGRGPESLGTGAGLGGAGAAALVGGVLLIGLVLAGNSLVCVSVASERTLQTPTNYFIVSLAAADLLLAVLVLPLFVYSEVQGGVWLLSPRLCDTLMAMDVMLCTASIFNLCAISVDRFVAVTVPLRYNQQGQCQLLLIAATWLLSAAVASPVVCGLNDVPGRDPAVCCLENRDYVVYSSVCSFFLPCPLMLLLYWATFRGLRRWEAARHTKLHSRAPRRPSGPGPPVSDPTQGPFFPDCPPPLPSLRTSPSDSSRPESELSQRPCSPGCLLADAALPQPPEPSSRRRRGAKITGRERKAMRVLPVVVGAFLVCWTPFFVVHITRALCPACFVSPRLVSAVTWLGYVNSALNPIIYTIFNAEFRSVFRKTLRLRC", - "output": "axon ; axon terminus ; cell cortex ; centrosome ; cytoplasm ; dendrite ; dendritic spine ; GABA-ergic synapse ; glutamatergic synapse ; membrane ; neuronal cell body ; plasma membrane ; postsynaptic membrane ; presynaptic membrane ; terminal bouton ; vesicle membrane ; dopamine binding ; dopamine neurotransmitter receptor activity ; dopamine neurotransmitter receptor activity, coupled via Gi/Go ; epinephrine binding ; G protein-coupled serotonin receptor activity ; heterocyclic compound binding ; identical protein binding ; metal ion binding ; neurotransmitter receptor activity ; norepinephrine binding ; serotonin binding ; SH3 domain binding ; adenylate cyclase-inhibiting dopamine receptor signaling pathway ; adenylate cyclase-inhibiting serotonin receptor signaling pathway ; adult locomotory behavior ; arachidonic acid secretion ; associative learning ; behavioral fear response ; behavioral response to cocaine ; chemical synaptic transmission ; dopamine receptor signaling pathway ; fear response ; G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger ; inhibitory postsynaptic potential ; negative regulation of protein secretion ; negative regulation of synaptic transmission ; negative regulation of vascular associated smooth muscle cell migration ; negative regulation of vascular associated smooth muscle cell proliferation ; negative regulation of voltage-gated calcium channel activity ; olfactory learning ; positive regulation of excitatory postsynaptic potential ; positive regulation of kinase activity ; positive regulation of MAP kinase activity ; positive regulation of penile erection ; positive regulation of sodium:proton antiporter activity ; presynaptic modulation of chemical synaptic transmission ; regulation of calcium-mediated signaling ; regulation of circadian rhythm ; regulation of dopamine metabolic process ; regulation of neurotransmitter secretion ; regulation of postsynaptic membrane neurotransmitter receptor levels ; regulation of postsynaptic neurotransmitter receptor internalization ; response to amphetamine ; response to histamine ; rhythmic process ; short-term memory ; synaptic transmission, dopaminergic" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MNIAVVGLSHKTAPVEVREKLSIPEAKLEEVLAHLKSYPHIQEVAILSTCNRLEIYAVVTETEQGIIEISQFLSEKGHIPLHHLRRHLFILLHQDAVRHLMRVAAGLESLVLGEGQILAQVKNTHKLAQKYGGIGRLLDRLFKQAMTAGKRVRSETSIGTGAVSISSAAVELAQMKVIDICVCRVTIIGAGKMSRLLVQHLLSKGVSKIAIVNRSLRRAQELAGLFPEAQLQLHPLEEMINAVSVSDIVFTSTGATEPILNRSNLESIIAVNQSLMLVDISVPRNVDADVQQLEQIQSYNVDDLKAVVAANQESRRRLAQEAEGLLEEEVESFELWWRSLDTVPTISCLRDKVETIREQELEKALSRLGTEFAEKHQEVIEALTRGIVNKILHEPMVQLRAQQDIEARKRCLQSLQMLFDLDIEEQYT", - "output": "glutamyl-tRNA reductase activity ; NADP binding ; chlorophyll biosynthetic process ; protoporphyrinogen IX biosynthetic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "METKKTLREGYTTGLCAAAATKAALTALITGQVQTDATIRIPIGRVVTFSLASCSFDGETATASVVKDGGDDPDATHGALIVSTVSWASSPGVHIDGGEGVGRVTKPGLPVPVGEAAINPVPRQMIHEAVNEVLAQYGLHRGVNVVISVPGGEEIAKKTLNPRLGIMGGISILGTRGIVVPFSTAAYRASIVQALQVAKANGCRHVVITTGGRSEKYAMQEYPHLPEEAFIEMGDFVGFTLKQCKRLGIKMVSMVGMMGKFSKVAQGVMMVHSKSAPVDFGFLAALAEQAGASSALVAAVRGANTAAQVGDMMQEAGCMKFFELLCEACCQAALHEVGGGLTVATSIYTMNGQQLGKAVQTDGDDEVDRCGC", - "output": "cobalt-precorrin-5B C1-methyltransferase activity ; cobalamin biosynthetic process ; corrin biosynthetic process ; methylation" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MATLQFVLGSASFDHQQVMLDRLAAQYQQAPNDTYLYLVPNHVKFTTEVAVLKGLKKRLKQTGNYAQANVAVLSFSRLGWFLCKDDPDYQKPRLSNVGMAMVVAKIIRELKAESPDLLKMFRGESERQGFATEVTKQLVELQNANIQPADLAPDQETGIIKRALASQAGGGRASQSTVFTDKMTVLYEIYRRFEAAVTTHVTAPDRSAMLLNHLEAADLSTTHVYLDRFAGEFSAQEQLIVDALIQRAADTTVSLILDRDYRGRELPSQNNLYYRSAKQYQDLLNLATQQVGVDVLDPIVLNQPNQRRVSDALVGVEEWMEADARFALPDRLPAPTDQVGFFTAPTRVAELNRVATKIRQLVATGQYRYRDFLVVTRHLDGYQTMLEPIFSRHQIPVFNDNQRPMATSPLATFTAALFKVLKDYYQEADVMELLKTGLLVPETPEELQQEGRAKRNPNTFMTAVYRTENYCLKFGKGGRSWFDERPWRLEGEQPESDALKRQNAQINWVKNYIKDELAPALADLQTATTGRELATKFYQFLLDQGVRHQLYSWAHQAQESGQLTQLRDVQQIWQTFGTLLDEYVTILGDQVAPTEQPGQLVAEFADLMNAGFNAGRYAQIPSTLDQVLVSESGMIQDNQRKVLFIMGATDDVMPEVKASEGLLSDPDRELLKRGLNDDQFLPISGTDQINNEPFLNYLSMLSVTERLYMSAPLMSSDDSELTLSPYLKGLARHFNQWDDQNNAPTTDLPDRPNPRASEDDVWSFVAAPAVTMGNLIEVERLSKDTGRKLTSAWRDVARALTRYDEGLTGRLNDIRDGQYAKNEAVPLQPELAARLYTTNRQGQVTNQLTASISQLEKFYQNPYDYFLRYGLHLKKRDELEVSSDKSGTLNHDALAFFVQSVIDEPDLQLADLVKEEHQGRQAELIDQAFEQAMNQQEELRELAANNSRVNLQLQVAKQLITTMAKTLCLQATQTDAQPVAVEKAFGQADWTGESQAAELPALTFDLTGAGLGEGAKVSLRGRIDRLDELKLGEQTYQLVVDYKSYNKAFDLVDAYAGQALQMLAYLNALQAANPGKQLLGSLYLRLYVPTVDAGKEGTAEELKEHLYQGITINDDAVLAALDHGLGEKGATLLSIKKKSKKDTSRFKVSADDQFSAKAGSNLVSPTDLKRLMDHNAELIKEAAVQILQGQNEIRPYRRQVGTTAETGLAFSDFLDVSRFDQALDDYKEIELTDADVEAKFEQEEE", - "output": "5'-3' exonuclease activity ; ATP binding ; ATP hydrolysis activity ; double-stranded DNA binding ; double-strand break repair via homologous recombination" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MKIALDAMGGDYAPIETVKGALEAIKESNISVVLVGKEEEIKKILQDYHYNESKIEIVHAEEVIEMHEHPAFAVKEKEDSSIVKAIKLLKEKKVDGVVSAGNTGAVMSSALLYLGRIRGIKRPAISTLIPTLTQIPSIILDIGANVDCKKEYLEQFALMGKVYMEEIFNVKNPKIALLNIGEEEGKGNQLVQETYTLLKNNPLFNFIGNVEGKDLFKGTANVIVCDGFVGNVAIKTAEGVAETLFDLLSSEIKSSLWSIILGLLLKPKFKNVKKKLDYSEFGGAPLLGVDGTVIISHGRSKAKAIKNALKVAEKMVKLEVNKKILEGLNKITDRGD", - "output": "cytoplasm ; phosphate:acyl- acyltransferase activity ; fatty acid biosynthetic process ; phospholipid biosynthetic process" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MSKTGGNDSKSTLYCSFCGKSQHEVRKLIAGPTVFICDECVELCMDIIREESKSSLVKSRDGVPTPKEIRRVLDDYVIGQDFAKKVLSVAVHNHYKRLAHATKHNDVELAKSNIMLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQASDYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLERIISQRGKGTSIGFGASVQAPDDRRTGEVFRSVEPEDLLKFGLIPEFVGRLPVLATLEDLDEEALKKILQEPKNALVKQYQRLFEMENVELTFQDEALGLVARKAIERKTGARGLRSILETILLDTMYDLPGLDSVEQVVIGPEVVDGKSKPLFIHGDRNKDAPASVSA", - "output": "ATP binding ; ATP hydrolysis activity ; ATP-dependent protein folding chaperone ; protein dimerization activity ; unfolded protein binding ; zinc ion binding" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MTEEVSRKQNFRQLGLSKWLVESLDAMRIRTPTAIQSGCIPEILKGRDCIGGAKTGSGKTIAFAGPMLTQWSEDPTGMFGIVLTPTRELAMQIAEQFTALGSYMNIRVALVVGGESIVDQALQLQRKPHFIIATPGRLAHHILNSGDDTVGGLKRVKYLVLDEADILLTETFSNDLKTCVGALPPKEKRQTLLFTATITDQVRALQDAPVQKGKQPLFCYEVENVDNVAIPSTLNTEYVLVPEHVKEAYLYQLLTCESYANSTAIIFVNRTTAAEVLRRTLKALDVRVASLHSQMPQQERTNSMHRFRANAARVLIATDVASRGLDIPTVELVINYDIPSDPDTFIHRSGRTARAGRKGDAISFITQRDVSRIEAIEARINMKMTECDKVHDTAVIRKALTKVSKAKREALMAMEKENFGERRKLQKRKTQKDGKRV", - "output": "nucleolus ; small-subunit processome ; ATP binding ; ATP hydrolysis activity ; RNA binding ; RNA helicase activity ; endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) ; endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) ; endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MRTAEESSGTVLHRLIQEQLRYGNPTDPTLLAIQQQALRGGSSGGGAGSPRSSLESLTQEESLSPQLSARQEPQGQEHQGDFQHSESPVCHLYQLHTEELPTYEEAKAHSQYLAYQRGQIGLHQGSLESPGGVGGAEQDDSMWDAKREHARSLSERLLQLSLERNCAHDNIPMSSSHSYPQLSNNHSDTVVNEQSVHQPDQRGPPPEYPFMVRSPGYMLSHSQEHGHYYNEPPPAFHSQHYRLFPTQPQAPRHNGLPTLTPAGQDVNVGGYSIPANNFQMEQLIKENERLKREVDSYSEKAARLQKLEQEIQRISEAYETLMKGSAKREALEKTMRNKLESEIKRLHDFNRDLRDRLETANKQRAAIEVEDKSRHAFAKLVEQNEDHLRERERLEKETQHLRASGEEWKRRREALEQALITAQTRNRQLEEELRRKRAYVEKVERMQSALAQLQAACEKREALELRLRTRLEQELKSLRAQQWQAQTQHASPGSYLDLNVSSLQQQLREREEQVLALEADITRWEQKYLEESTMRQFAMDAAATAAAQRDTTIINHSPRNSPNSSFNEDLPSPNHRHQEMENRIRALYAQLLEKDAIIKVMQQRSRREQGRPELQGLRPARSVPSINTVATASTTRAKGKSLSDDQTAVASLPPLPHLLAKIQCRDSSTQCDSEEPSCKAEPADVAVSAPEPSTASSSESTSLKTTQISSAVENDMVEILI", - "output": "bicellular tight junction ; cell cortex ; cell junction ; cell-cell junction ; cytoplasmic vesicle ; plasma membrane ; polymeric cytoskeletal fiber ; recycling endosome ; actin cytoskeleton organization ; angiogenesis ; cell migration ; convergent extension ; cortical actin cytoskeleton organization ; dorsal aorta development ; dorsal aorta morphogenesis ; embryonic pattern specification ; endothelial cell proliferation ; establishment of cell polarity involved in ameboidal cell migration ; establishment of localization in cell ; filopodium assembly ; hippo signaling ; regulation of cell migration ; regulation of cell shape ; Wnt signaling pathway" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MSVTVEVADEETHDVPLVEQVRTTPDQNVDVKVQENNVVTTKIGPKLETIPAAKMQDDNGDEEKAENSEGAAAEKVEKQHDDDGVVVHEETDGVASSRSSHHDKQKPGETKKSGDGKMDDDDIITTARSSSRRICGSAASSSDSETADDAPLLPDEGPSHAVRLEMPGDKPASPHDRFPKTPLKTLVAFLMLVVAAAGNTITLSWIHERYPLTPPLPDIVFELIPKIPWGLRLCENLMIGSFVSLLVLILFHRHRWIVLRRLCFIGSILYGMRCITMMVTPVPKADEDFECSPRFGENATFSLIVMRGVWSMFGLGLNLFDNQKVVLCGDYIYSGHTLVLVVSALFIGEYSPRRFYILHWLSWLVCSVGVIFLVLSHGHYTIDVILSYFACTRVFWAYHTQAAHPSIRLSVQNHQAKEFWFPLLRWFEGDIRRPVPRRFDCPISYSQVCNAFRRVRPRGRNGAARPAFE", - "output": "Golgi membrane ; ceramide cholinephosphotransferase activity ; sphingomyelin synthase activity ; ceramide biosynthetic process ; sphingomyelin biosynthetic process" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQKHKAEAAH", - "output": "ATP binding ; ATP hydrolysis activity ; protein unfolding" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "VLSPADKTNIKSTWDKIGGHAGDYGGEALDRTFQSFPTTKTYFPHFDLSPGSAQVKAHGKKVADALTTAVAHLDDLPGALSALSDLHAYKLRVDPVNFKLLSHCLLVTLACHHPTEFTPAVHASLDKFFTAVSTVLTSKYR", - "output": "hemoglobin complex ; heme binding ; iron ion binding ; oxygen binding ; oxygen carrier activity" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MDDHLYRRRAAERALDYVESGMAIGLGTGSTASFMLRGLAARLADGRLQRVVGVPTSEQTAVLARELGIPLTTLDRHPSLDLALDGADEIDPHLRLIKGLGGAMLREKIVAASAARFVVMASVSKRVERLGERSPLPVEVVTFGMPLCIRRLAALGGEPVLRCDHSGAPFVTDEGNLILDCHFGVIADPEALAAAICAIPGVVAHGLFLGMASLAVIAGPDGIVELECPDASRR", - "output": "ribose-5-phosphate isomerase activity ; pentose-phosphate shunt, non-oxidative branch" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MSEATTTLDGWYCLHDLRSIDWAAWKTLSSDERGQAVSEFLNVVEKWNDVAAAKKGSHAMYTVVGQKADIMLMILRPTMEELNEIETELNKTTLAEYMVPAYSYVSVVELSNYLPADEDPYQNPQILARLYPELPKANHICFYPMDKRRQGDDNWYMLPMEERKKMMYSHSKIGRQYAGKVRQVISGSVGFDDFEWGVTLFADDVLQFKKLIYEMRFDEVSARYGEFGTFFVGNILPDEKVEKFLHI", - "output": "heme binding ; metal ion binding ; peroxidase activity ; heme biosynthetic process" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "PLAKKHNVKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDLPVEKLKEVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIHSMVETQDSSVLAQLGWPDMRLPILYTLSWPERVYCSEITWPRLDLCNVDLTFKKPDHVKYPSMDLAYAAGRAGGTMTGVLSAANEKAVEMFIDEKISYLD", - "output": "chloroplast stroma ; 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity ; isomerase activity ; metal ion binding ; isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway ; response to jasmonic acid ; response to salicylic acid ; response to UV-C" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MTQYTPMIQQYLKVKADYQDAFLFFRLGDFYEMFFEDAVKAAHELEITLTSRDGGSSERIPMCGVPYHAAKNYIEQLVEKGYKVAVCEQVEDPKTAKGVVRREVVQLITPGTMMEGRTIDEKENNFLAALTHFEDGSYALACNDLTTGQNTVTLLTGSVEDILLEVYATGSKEIVVDSSFSKDELNKLTETLKMTISYEDATAIPEGLEHLVKNVSQAKLIKAVGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKEKTGSLLWLLDKTKTAMGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKEKLKEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYAARLIQGADPCESLTELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYVSKNGKTWIAELEKRERDITGIKSLKIGYNRIFGYYIEVTKANLGALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFATVSEEEQFVKPVLTTKREIFIKDGRHPVVEKVLNGKLYVPNDCIMPENMDVFLITGPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEDSLDQLKNVHVSAIEENGKVVFLHKIQDGAADKSYGIHVAQLAELPDSLIARAKEVLAQLEGQEEIVIPKRVEVKAQEQEVIPEPIVVKEEPIEIEETKVDNEEESQLSFFGAEQSSKKQDKPALDAKETAVLTQIKKIDLLDMTPLEAMNELYRLQKKLKKG", - "output": "ATP binding ; ATP-dependent DNA damage sensor activity ; damaged DNA binding ; mismatched DNA binding ; mismatch repair" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MKKGTQRLSRLFAAMAIAGFASYSMAADTIKIALAGPVTGPVAQYGDMQRAGALMAIEQINKAGGVNGAQLEGVIYDDACDPKQAVAVANKVVNDGVKFVVGHVCSSSTQPATDIYEDEGVLMITPSATAPEITSRGYKLIFRTIGLDNMQGPVAGKFIAERYKDKTIAVLHDKQQYGEGIATEVKKTVEDAGIKVAVFEGLNAGDKDFNALISKLKKAGVQFVYFGGYHPEMGLLLRQAKQAGLDARFMGPEGVGNSEITAIAGDASEGMLATLPRAFEQDPKNKALIDAFKAKNQDPSGIFVLPAYSAVTVIAKGIEKAGEADPEKVAEALRANTFETPTGNLGFDEKGDLKNFDFTVYEWHKDATRTEVK", - "output": "periplasmic space ; branched-chain amino acid transport ; D-alanine transport ; L-alanine transport ; L-isoleucine import across plasma membrane ; L-valine import across plasma membrane" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MSKVATRFAPSPTGALHIGGVRTALFNWLYSKNKNGTFHLRIEDTDKERSKDEHKIQIIKSLKWIGIDHDGDEYIQSTKINDHVNVANELLKNGHAYKCYCSSAEIEEQKKRARQKKLPYVYNRKCRDLQETNAPTIIKPVIRFKIKIEGTSVLKDLVQGDVEIENTTIEDFIILRNDGTPTYNLSATVDDHQMKMTHIIRGDDHKINTFKQMQIYLAMSWDLPNFAHIPLIHTIEGKKLSKRDNASTLDDYSKIGIMPDALRNYLLRLGWSYQDKEIFTLKESIELFNLEGIGKSPSKLDMSRILSLNEHYIKTINENELYDHLVKYCEIYKEKIKPEKETKIKPSLIFLKNKAKTLEDIFNNAKYIIFDDVKFEDKDLELIDDKAKSIIKEFKEKLISINTLNKETLEPIVNDLIKKYETNFKGVGQPLRIALTGSKFGPGLYDIIISLGNEEVERRLGNKIII", - "output": "cytoplasm ; ATP binding ; glutamate-tRNA ligase activity ; tRNA binding ; zinc ion binding ; glutamyl-tRNA aminoacylation" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MANLTTLAVSTRAKAGKGAARATRREGLVPAVIYGGKQEPSIIALDPRVIMKELHRGGWSSRVYNLAAEGAEPVAALIRDVQLHPVTDAPIHVDFQRVAAGTKVHVEVSIAFVGEEKSPGIKRGGVLNVVRHYVDVQADPANIPEHFTAELSGLDIHDNVRWTDLKGTEGVVLGSGQAADMVIASIAAPTIDAEMEAEAAAKAAAEAEAAAKPGAKKK", - "output": "ribonucleoprotein complex ; ribosome ; 5S rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MSVSFENKETNRGVLTFTISQDQIKPELDRVFKSVKKSLNVPGFRKGHLPRPIFDQKFGEESLYQDVMNALLPNAYEAAVKEAGLEVVAQPKIDVTSMEKGQDWVITAEVVTKPEVKLGDYKNLEVSVDVEKEVTDADVEERIERERNNLAELVIKEAAAENGDTVVIDFVGSIDGVEFDGGKGENFSLGLGSGQFIPGFEDQLVGHSAGETVDVIVTFPEDYQAEDLAGKEAKFVTTIHEVKAKEVPALDDELAKDIDEEVETLADLKEKYRKELAAAKEEAYKDAVEGAAIDTAVENAEIVELPEEMIHEEVHRSVNEFLGNLQRQGINPDMYFQITGTTQEDLHNQYQAEAESRTKTNLVIEAVAKAEGFDASEEEIQKEVEQLAADYNMEVAQVQNLLSADMLKHDITIKKAVELITSTATVK", - "output": "cytoplasm ; peptidyl-prolyl cis-trans isomerase activity ; cell cycle ; cell division ; protein folding ; protein transport" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MSDKEDEKQSQPVLKDDKQDQTEEPAIDDNVNGDEGPSDEEEGDDVFDSSEEDEDLDNDEEEAQKVREGFIVDDDEEGGEEDEVVKKKSRRKRRAREEENEALDEDDLDLLMENAGFKRPSASEAAKQRSGKLKRLKRVGDDEEESASAEPESEVARTNKLDDFFSEEEEEEELEDDGTGRAPSRKGVEKTVTLADDMDDFIEEDEFSDEDEEARKFRIAEKKRIKEQRLAQPTQITGLSPDKVDEMFEVFGDGHDYDWALELENEEELDRLEESSENEQDENELGIDSKRKKKLTLQDIYDLQDLKKNLLTEEDMNIRKADIPERYQELRTGLKNYGKLSPEDLELEKNWISDKIAVDKNFDADYDTTEFKEAIGNAINFIQQENLEVSFIYAYRRNYISSRSKDGFVLIEDDLWDIVFYDTEFHSIIYKRDYVKTFYEKLDIHDPIVDEYFSNQSMTELNSLQDIYDYVEFKYAQEINDVLLSTQQDATSKKHLKNSSYEKFKASALYQAINDTGITAEQVGENISAEHQLHPVVDHPSLKPTDSVANILEGPEAKDLQIFSQNPKLALETIEKYYALELSKNPKVRQKIRDDFYKYYIVDVALTSKGRKEIQRGSPYEDIKYALGRTPAHFRSEPDVFLRMLEAESLHLMNIQIHVSSQDQYTNHLFQTSLETSNTSEIASEWNSFRRDAFDSALNKVFSDVSQEIKDELKKTCLRLVTKSVRHQFMFKLDQAPFIPNPKDPKIPRVLTITCGQGKFGSDAIIAVYLNRKTEFVRDYKIVENPFDRKEPELFENALDDIIQHCQPNVIGINGPNPSTQRLYKKIQEIVQKKQIVDNRGSHVPVIYVEDEVAVRYQSSERAAQEFPSKPTLVKYCIALGRYIHSPLLEYANLTNEELLSLSIHSHQSLLTRELFLQALETSFVDIVNLVGIEVNKATDNHYYAKALRYIAGFGRRKSADFLESLQRLNEPLLARQQLITHDILTKTIFMNSAAFLYISWNEKNQRYEDLEHDQLDGTRIHPEDYHLATKVAADALEFDPDAIAEKEEQGTMSEFIELLREDPDRRTKLESLNLEAYAEELEKNTGQRKLNNLNTIVLELLEGFEELRNDFHPLHGDEVFKSLTGESEKTFFKGCIIPVRVERFRHNDIYGVTNSGVECVINAQRHIGAQLKRPAEEVYEIGKTYPAKVIYIDYDNISCEVSLLEHDIRRQYVPIHYSKDPSIWNVEQEMKDQEIEKKLALEEARAKRTHRVINHPYYGNFTGPQAEDYLRSRERGDFVIRQSSRGDDHLAITWKLDKDLFQHVDILEKDKENPLALGKTLIVEDQKYHDLDQIIVEYLQNKVRLLNEITSNEKFKKGTKKEVIKFIEDYSKVNPNRSVYYFSFNYEHPGWFYLMFKINAQSQLYVWNVKLTHTGFFLVNYNYPTVIQLCNGFKTLLKSSSRNKTQDNNNNNSGGYYGY", - "output": "nucleus ; DNA binding ; nucleobase-containing compound metabolic process ; positive regulation of transcription elongation by RNA polymerase II" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MDTLGRKVVVCDNGTGFVKCGYAGSNFPEHIFPALVGRPIIRSTAKVGNIEIKDLMVGDEASELRSMLEVNYPMENGIVRNWDDMKHLWDYTFGPEKLNIDTKNCKILLTEPPMNPTKNREKIVEVMFETYQFSGVYVAIQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFSLPHLTRRLDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMIKEKLCYVGYNIEQEQKLALETTVLVESYTLPDGRIIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLERELKQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLADIMKDKDNFWMTRQEYQEKGVRVLEKLGVTVR", - "output": "Arp2/3 protein complex ; cell projection ; cytoplasm ; nucleus ; site of double-strand break ; actin binding ; ATP binding ; Arp2/3 complex-mediated actin nucleation ; positive regulation of double-strand break repair via homologous recombination ; positive regulation of transcription by RNA polymerase II" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MLDPNLLRNEPDAVAEKLARRGFKLDVDKLRALEERRKVLQVNTENLQAERNSRSKSIGQAKARGEDIEPLRLEVNKLGEELDAAKAELDTLLAEIRDIALTIPNLPADEVPVGKDENDNVEVSRWGTPREFDFEIRDHVTLGEMHSGLDFAAAVKLTGSRFVVMKGQIARMHRALSQFMLDLHTEQHGYSENYVPYLVNHDTLYGTGQLPKFAGDLFHTRPLEEEADSSNYALIPTAEVPLTNLVRDEIIDEDQLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRPEDSMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMGFGACKTYDLEVWVPAQNTYREISSCSNVWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLVAVMENYQQADGRIEVPEVLRPYMNGLEYIG", - "output": "cytoplasm ; ATP binding ; serine-tRNA ligase activity ; selenocysteine biosynthetic process ; seryl-tRNA aminoacylation" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MPQNDYIERHIKQHGKRLDHEERKRKREARESHKISERAQKLTGWKGKQFAKKRYAEKVSMRKKIKAHEQSKVKGSSKPLDTDGDALPTYLLDREQNNTAKAISSSIKQKRLEKADKFSVPLPKVRGISEEEMFKVIKTGKSRSKSWKRMITKHTFVGEGFTRRPVKMERIIRPSALRQKKANVTHPELGVTVFLPILAVKKNPQSPMYTQLGVLTKGTIIEVNVSELGMVTAGGKVVWGKYAQVTNEPDRDGCVNAVLLV", - "output": "nucleolus ; nucleus ; preribosome, large subunit precursor ; maturation of 5.8S rRNA ; maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) ; maturation of LSU-rRNA ; maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) ; ribosomal large subunit biogenesis" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MGNMGIWQLLIIAVIVILLFGTKKLRSLGGDLGGAVKGFKNAMSSEEEKKALEETASEKATPSVEKTAPNAEKKTETKDKEQV", - "output": "TAT protein transport complex ; protein transmembrane transporter activity ; protein transport by the Tat complex" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "AEKIKICLQKQVNSSFSLHNGFGGNLYATEEKRMFELVKPKAGASVLNQSTWIGFGDSRTDKSNSAFPRSADVSEKTADKFRSLSGGSLMLSMFGPPGKVDYLYQGCGKHKVFYEGVNWSPHAAINCYRKNWTDIKLNFQKNIYELASQSHCMSLVNALDKTIPLQVTAGVAKNCNNSFLKNPALYTQEVNPSKEICGKENLAFFTLPTQFGTYECKLHLVASCYFIYDSKEVYNKRGCDNYFQVIYDSSGKVVGGLDNRVSPYTGNTGDTPTMQCDMLQLKPGRYSVRSSPRFLLMPERSYCFDMKEKGLVTAVQSVWGKGRESDHAVDQAYLSTPGCMLIQKQKPYIGEADDHHGDQEMRELLSGLDYEARCISQSGWVNETSPFTEEYLLPPKFGRCPLAAKEESIPKIPDGLLIPTSGTDTIVTKPKSRIFGIDDLIIGLLFVAIVEAGIGGYLLGSRKESGGGVTKESAEKGFEKIGNDIQILRSSTNIAIEKLNDRITHDEQAIRDLTLEIENARSEALLGELGIIRALLVGNISIGLQESLWELASEITNRAGDLAVEVSPGCWIIDNNICDQSCQNFIFKFNETAPVPTIPPLDTKIDLQSDPFYWGSSLGLAITTPISLAALVISGIAICRTK", - "output": "host cell plasma membrane ; membrane ; viral envelope ; virion membrane ; host cell surface receptor binding ; sialate 4-O-acetylesterase activity ; sialate 9-O-acetylesterase activity ; endocytosis involved in viral entry into host cell ; fusion of virus membrane with host endosome membrane ; fusion of virus membrane with host plasma membrane ; virion attachment to host cell" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MADAASQVLLGSGLTILSQPLMYVKVLIQVGYEPLPPTIGRNIFGRQVCQLPGLFSYAQHIASIDGRRGLFTGLTPRLCSGVLGTVVHGKVLQHYQESDKGEELGPGNVQKEVSSSFDHVIKETTREMIARSAATLITHPFHVITLRSMVQFIGRESKYCGLCDSIITIYREEGILGFFAGLVPRLLGDILSLWLCNSLAYLVNTYALDSGVSTMNEMKSYSQAVTGFFASMLTYPFVLVSNLMAVNNCGLAGGCPPYSPIYTSWIDCWCMLQKEGNMSRGNSLFFRKVPFGKTYCCDLKMLI", - "output": "mitochondrial outer membrane ; membrane insertase activity ; lipid homeostasis ; positive regulation of apoptotic process ; positive regulation of stem cell differentiation ; protein insertion into mitochondrial outer membrane ; regulation of mitochondrial fusion" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MHSIAIFGGTFDPVHNGHIKTSLAIQANFGFDSYYFLPCKSPAIKPPSFASSEQRVEMLKLALKPYPDFKIDTRELDRDTPSYMVYTLQSFRQEYTDSSLTLIIGYDGLLNLPQWYQWEKIISLANLLVINREEFFQKPVPKSVQTLLNQYRNDDKNILLNHHAGSICLYNAGHYDISSTKIREQLKQHKDVKNNLPDLVYDYIKKQELYQ", - "output": "ATP binding ; nicotinate-nucleotide adenylyltransferase activity ; NAD biosynthetic process" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MLTLGELAKKLDAELIGEASHVVDGLGTIQSAGPSQLTFLANPRYRSFLEQTNAGAVLIPESQREFCPVPALIVKDPYLSFAKASAFFEVAPQVQPGVHPAAVVDATAQIHTSASIGPNAVVEAGVIVGEGAVIMANSVVGAGCHIGDQCRIWPNVTIYHGVTLGPRTTIHANCVIGGDGFGFAFNGAGWTKLHQVGGVTIGADVEIGAGTTVDRGAIEDTIIGDGVILDNQIQVAHNVVIGDHTAIAGKAGIAGSAKIGSFCLIGGAAGIAGHIEVCDKVQILAMSLVSSSIKEPGTYGSALPVDSQSRYRRNVARFRNLDDLARRVRKLERLSD", - "output": "N-acyltransferase activity ; lipid A biosynthetic process" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MSPDQTAVEYTAKDIEVLDDLEAVRKRPGMYIGGVGVRGLHHLLWEVVDNAVDEALAGYCDTIKVSLHKDGSASVEDNGRGIPTEMHELGKSALEIVMTKLHAGGKFSKKVYRVSGGLHGVGVSVVNALSEWLEVWVKRNGKIYYQKYQRGSRSPEAGHRTEVLGETKEHGTTVRFKPDREIFETTEFKYEIVAQRLKELAYLNRGLKIILFDEREGKEETFHFEDGIIGLVRSLNRNRKPLHEPIYIETTKDGVSVEVAIQFTDSDVENIQAFANNINTSEGGSHVVGFRAGLTRAVNEYGKKHLKKFEPVTGVDIREGLTAVISVKVPEPQFEGQTKTKLTNSDVKTVVESAVYSGVLRWLEENPAQAETLLNKFILNKKAREAAKRAKELVKRKNELITTLPGKLADCSSKNPEERELFIVEGESAGGSAKQARDRRFQAILPIKGKIINVEKAGMARVLKNDEIKAIISAIGAGIGKDFDITKARYRRIIIMTDADVDGAHIRTLLLTFFYRYMRPLIESGYLYIAQPPLYQIKKGKKSYYAYSDEELKRTLEQVGGGEVQRYKGLGEMNPQQLWETTMNPENRILIQVTLEDAKRADELFSILMGEDVESRRNFIMAHSKEVKNLDI", - "output": "chromosome ; cytoplasm ; ATP binding ; DNA binding ; DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity ; metal ion binding ; DNA topological change ; DNA-templated DNA replication" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MSNTTRSSRVTIGRIGTTPQITDPWSSGLEKQRPSRCGGPKSLAEPTYRKIGRRKMMLHMRVHDPGTTVTQRAKETATAKLNRIYLCTFNRMAQSCIYFVLFLVILSPNTSCALRSSAGETQNYVGILSNDSATTTYDVSSLHSSRRTNPPSSSSSSSSNVDVDYRNDRELHKVDLVGLGGERAGQAETISGGKYDYNYENTHTNASAKDEIVERQSNSLDFDGVDMFGAFSIPEEAIYTNEFAVNIPAGKQMADVIATKHGFINRGQIGSLDNYYLFQHHHVSKRSLRSSRKHQGALKSENEVKWMQQQHEKVRRKRDGPYQDLPTYSPYNLLRQHGGYVVDPNPHLSFSPESISLASHSQRMEYRDVSSHFIFPDPLFKEQWYLNGGAKDGLDMNVGPAWQKGYTGKGVVVSILDDGIQTNHPDLAQNYDPEASFDINGNDSDPTPQDNGDNKHGTRCAGEVAAVAFNNFCGVGVAYNASIGGVRMLDGKVNDVVEAQALSLNPSHIDIYSASWGPEDDGSTVDGPGPLARRAFIYGVTSGRQGKGSIFVWASGNGGRYTDSCNCDGYTNSIFTLSISSATQAGFKPWYLEECSSTLATTYSSGTPGHDKSVATVDMDGSLRPDHICTVEHTGTSASAPLAAGICALALEANPELTWRDMQYLVVYTSRPAPLEKENGWTLNGVKRKYSHKFGYGLMDAGAMVSLAEQWTSVPPQHICKSRENNEDRKIDGAYGSTLSTHMDVNGCAGTINEVRYLEHVQCRITLRFFPRGNLRILLTSPMGTTSTLLFERPRDIVKSNFDDWPFLSVHFWGEKAEGRWTLQVINGGRRRVNQPGILSKWQLIFYGTSTQPMRLKSELLNSSPQLRSPSSSNPFLFPSASNIGQPANEGGNFNTDSFASYLNYQNIFSSAGSDPEPATATLDGQNVTAAIAGGSSAESLGFTASAAQLVAAPETRDGDKKILHSCDAECDSSGCYGRGPTQCVACSHYRLDNTCVSRCPPRSFPNQVGICWPCHDTCETCAGAGPDSCLTCAPAHLHVIDLAVCLQFCPDGYFENSRNRTCVPCEPNCASCQDHPEYCTSCDHHLVMHEHKCYSACPLDTYETEDNKCAFCHSTCATCNGPTDQDCITCRSSRYAWQNKCLISCPDGFYADKKRLECMPCQEGCKTCTSNGVCSECLQNWTLNKRDKCIVSGSEGCSESEFYSQVEGQCRPCHASCGSCNGPADTSCTSCPPNRLLEQSRCVSGCREGFFVEAGSLCSPCLHTCSQCVSRTNCSNCSKGLELQNGECRTTCADGYYSDRGICAKCYLSCHTCSGPRRNQCVQCPAGWQLAAGECHPECPEGFYKSDFGCQKCHHYCKTCNDAGPLACTSCPPHSMLDGGLCMECLSSQYYDTTSATCKTCHDSCRSCFGPGQFSCKGCVPPLHLDQLNSQCVSCCQNQTLAEKTSSAACCNCDGETGECKATSTGGKRRTVVGSGSAYKSSESKHGSFENDGNAREFVLRLDSPLTAITAIAVAICLLIITIFSIIFAVLQRNSNHVSRNSVRYRKIANTSSGRRKNLSAKPTSDARFIFNIGEDDDTDGDNSDDELDGNVGTDINNRIVYDRKGNDHGHEFYIESTNDIDAIEFHCNGAGAQKAETQLQRCNANGDDDDILHYDRHTNAERKNHPSSTTSRTNIRS", - "output": "membrane ; plasma membrane ; trans-Golgi network ; serine-type endopeptidase activity ; negative regulation of secretion ; protein processing ; R8 cell fate specification" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MKKLLKISAISAALLSAPMMANADVLASVKPLGFIVSSIADGVTGTQVLVPAGASPHDYNLKLSDIQKVKSADLVVWIGEDIDSFLDKPISQIERKKVITIADLADVKPLLSKAHHEHFHEDGDHDHDHKHEHKHDHKHDHDHDHDHKHEHKHDHEHHDHDHHEGLTTNWHVWYSPAISKIVAQKVADKLTAQFPDKKALIAQNLSDFNRTLAEQSEKITAQLANVKDKGFYVFHDAYGYFNDAYGLKQTGYFTINPLVAPGAKTLAHIKEEIDEHKVNCLFAEPQFTPKVIESLAKNTKVNVGQLDPIGDKVTLGKNSYATFLQSTADSYMECLAK", - "output": "periplasmic space ; metal ion binding ; zinc ion transport" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MSDIKEFNLIDVRNNSSIVNDLNNVYKLWGYEEISPSFINNLETIKGREVIDGDELIGIVSNSSLCLRPEMTTSIVKLTSTRLLNKKRPIRLFNSGIVFNKKQSYKNTYKFQENLQSGIELISYDTQYPEIEVINILFDAIDNINLIDSCNLTLLVSTTKIMDLILFNYKNNNYEEIKKCMVNLDHESLDKLNIDNNDKAILKELLFTRGEPAIILKKLKNIYGNNNVIEELDCLFNTLSKISKKYNIKIQLDPTYQPHLNLYAGIVFQLICDNKNVKTIIAKGGRYDELVRYFNPNEKIINGIGFTISIDNLRELIVEKSQTKKKVLLLFKNSYLLDKGINEQKALQKKGIITILYLNPCNDNSKANILMKEHNCTEIQWIK", - "output": "cytoplasm ; histidine biosynthetic process" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MRVLYLLFSFLFIFLMPLPGVFGGIGDPVTCLKNGAICHPVFCPRRYKQIGTCGLPGTKCCKKP", - "output": "extracellular space ; CCR6 chemokine receptor binding ; chemoattractant activity ; phosphatidylinositol-4,5-bisphosphate binding ; antifungal innate immune response ; antimicrobial humoral immune response mediated by antimicrobial peptide ; cell chemotaxis ; chemotaxis ; defense response to bacterium ; defense response to fungus ; defense response to Gram-negative bacterium ; defense response to Gram-positive bacterium ; disruption of cells of another organism ; killing of cells of another organism" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MAEFPAELYYSKNHEWMRKESDETFTVGITDHAQEQLGDLVFVELPETNIHVDAGDEVAVVESVKTAADVYSPLSGKVIEINNALENEPATVNRDPYGDGWLYRITIDDEKELNDLLDADGYQTLIEAES", - "output": "glycine cleavage complex ; glycine decarboxylation via glycine cleavage system" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MRTLWITAVLLVGVEGHLLQFRKMIKKMTGKEPIVSYAFYGCYCGKGGRGKPKDATDRCCFVHDCCYGKVTGCDPKWDYYTYSSENGDIVCEGDNPCTKEVCECDKAAAICFRDNLKTYKKRYMTFPDIFCTDPTEKC", - "output": "extracellular region ; calcium ion binding ; phospholipase A2 activity ; toxin activity ; arachidonic acid secretion ; lipid catabolic process ; phospholipid metabolic process" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MARFFRRRKFCRFTAEDVKEIDYKDLNTLKAYVSETGKIVPSRITGTKARYQRQLATAIKRARFLALLAYTDSHGR", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MSQIHKHTIPANIADRCLINPQQYEAMYQQSINAPDTFWGEQGKILDWITPYQKVKNTSFAPGNVSIKWYEDGTLNLAANCLDRHLQENGDRTAIIWEGDDASQSKHISYKELHRDVCRFANTLLELGIKKGDVVAIYMPMVPEAAVAMLACARIGAVHSVIFGGFSPEAVAGRIIDSSSRLVITSDEGVRAGRSIPLKKNVDDALKNPNVTSVEHVVVLKRTGGKIDWQEGRDLWWHDLVEQASAQHQAEEMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAALTFKYVFDYHPGDIYWCTADVGWVTGHSYLLYGPLACGATTLMFEGVPNWPTPARMAQVVDKHQVNILYTAPTAIRALMAEGDKAIEGTDRSSLRILGSVGEPINPEAWEWYWKKIGNEKCPVVDTWWQTETGGFMITPLPGATELKAGSATRPFFGVQPALVDNEGNPLEGATEGSLVITDSWPGQARTLFGDHERFEQTYFSTFKNMYFSGDGARRDEDGYYWITGRVDDVLNVSGHRLGTAEIESALVAHPKIAEAAVVGIPHNIKGQAIYAYVTLNHGEEPSPELYAEVRNWVRKEIGPLATPDVLHWTDSLPKTRSGKIMRRILRKIAAGDTSNLGDTSTLADPGVVEKLLEEKQAIAMPS", - "output": "acetate-CoA ligase activity ; AMP binding ; ATP binding ; metal ion binding ; acetyl-CoA biosynthetic process from acetate ; chemotaxis" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MTSHSAVRIAIFAVIALHSIFECLSKPQILQRTDKSTDSEWDPQTCPETCIPSKNITCSDGCVCVKLGEEEEGTCFNMTGVDWLGSPSDD", - "output": "extracellular region ; C-X-C chemokine binding" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MESQQLSNYPHISHGSACASVTSKEVHTNQDPLDVSASKIQEYDKASTKANSQQTTTPASSAVPENPHHASPQPASVPPPQNGPYPQQCMMTQNQANPSGWSFYGHPSMIPYTPYQMSPMYFPPGPQSQFPQYPSSVGTPLSTPSPESGNTFTDSSSADSDMTSTKKYVRPPPMLTSPNDFPNWVKTYIKFLQNSNLGGIIPTVNGKPVRQITDDELTFLYNTFQIFAPSQFLPTWVKDILSVDYTDIMKILSKSIEKMQSDTQEANDIVTLANLQYNGSTPADAFETKVTNIIDRLNNNGIHINNKVACQLIMRGLSGEYKFLRYTRHRHLNMTVAELFLDIHAIYEEQQGSRNSKPNYRRNPSDEKNDSRSYTNTTKPKVIARNPQKTNNSKSKTARAHNVSTSNNSPSTDNDSISKSTTEPIQLNNKHDLHLRPETY", - "output": "cytoplasm ; retrotransposon nucleocapsid ; RNA binding ; transposition, RNA-mediated" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MSVMPDHWIKERALKDGMISPFVDHKEGTGVLSYGLSSYGYDARLDNKFKIFANTHSVVVDPKNFSQDSFVDREGDFCIIPPNSFMLAKTVEYFNIPRDVMVVCVGKSTYARCGIVVNVTPLEPGWSGYVTLEFSNTSPLPVKVYAFEGACQFLFFSGKERCSKSYDEAGGKYMGQSDVTLPIIS", - "output": "dCTP deaminase activity ; nucleotide binding ; dUMP biosynthetic process ; dUTP biosynthetic process" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MALRGPAGLGPGSRRPLDEAVAGAEGREAPALVAAGGAPEDDEEDDGRGRGLLRWDSFSAWLHCVCVVGFDLELGQAVEVIYPQHSKLTDREKTNICYLSFPDSNSGCLGDTQFCFRFRQSSGRRVSLHCLLDQFDKDLPVYLKKDPAYFYGYVYFRQVRDKTLKRGYFQKSLVLISKLPYIHFFHTVLKQIAPEYFEKNEPYLEAACNDVDRWPAPVPGKTLHLPIMGVVMKVRIPTCHDKPGTTQIVQLTQQVDTNISVILPTVHEVDIFRCFCPVFLHSQMLWELVLLGEPLVVMAPSPSESSETVLALVNCISPLKYFSDFRPYFTIHDSEFKEYTTRTQAPPSVILGVTNPFFAKTLQHWPHIIRIGDLKPTGEIPKQVKVKKLKNLKTLDSKPGVYTSYKPYLNRDEEIIKQLQKGVQQKRPSEAQSVILRRYFLELTQSFIIPLERYVASLMPLQKSISPWKSPPQLRQFLPEEFMKTLEKTGPQLTSRIKGDWIGLYRHFLKSPNFDGWFKTRRKEMTQKLEALHLEALCEEDLLLWIQKHTEVETVDLVLKLKNKLLQADREHLPVKPDTMEKLRTHIDAIILALPEDLQGILLKTGMT", - "output": "cytoplasm ; cytosol ; intracellular membrane-bounded organelle ; recycling endosome ; guanyl-nucleotide exchange factor activity ; positive regulation of cell-cell adhesion mediated by cadherin" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MTYETLLERFLNYVKINTRSNPASTTTPSTKSQADFALTVLKPEMEAIGLQDIHYNPANGYLIGSLPANSSKLTRKIGFIAHMDTADFNAEGVAPQIIESYQGGEIKLGQSGYSLCPEDFPNLNQYLGQTLITTDGTTLLGADDKSGIAEIMTAIEFLVANPQIEHCDIKVAFGPDEEIGVGADKFDVNAFDVDFAYTIDGGPLGELQYETFSAAALELKVLGRNVHPGTAKNQMINALQLAMDFHSQLPVDDRPEKTDGYQGFYHLHSMSGTVEEAQASYIIRDFEDSSFEARKAFVTQLAEEMNSQLGAERVFVTVTDQYYNMKKVIEKDMTPVNLAKAVMEDLAIKPVIEPIRGGTDGSKISFMGIPTPNIFAGGENMHGRFEFVSLQTMEKAVDVILGIVQKA", - "output": "cytoplasm ; metallopeptidase activity ; tripeptide aminopeptidase activity ; zinc ion binding ; peptide catabolic process ; proteolysis" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MSTNDNWYIEHFQPTGSAIGFRISGKLDEVQSLFQKIEIYQTTDWGKLMLIDGAVMLTSRDNFFYHEMISHPALFTHPTPKRVVIIGGGDCGTLREVLKHPGVESATQCDIDEQVTRMSEKYFPELCDSNHDARAELLFDDGVAYMANCPAGSVDIVIVDSTDPVGPAEGLFNKAFYESCFKALKDDGLLVQQSESPLALLDLIKEMRTEMGKAGFQSFKTLPFPQPCYPTGWWSVTMASKQAKADFAFRQGAAQAKGFETLYYTAHLHTGVLVAPPFVAKALGE", - "output": "cytoplasm ; spermidine synthase activity ; spermidine biosynthetic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MSLGLVGRKVGMTRIFAEDGASIPVTVLDVSNNRVTQVKTPEIDGYAAIQVAFGKRRASRVSKPLAGHLAKAGVEAGHVLKEFQIEADQLASFKAGDQVAVTIFAEGQKVDVTGTSIGKGFQGGIKRHNFSSNRASHGNSLSHNAPGSIGMAQDPGRVFPGKRMAGHLGDVQSTMQGLTIVRVDADRQLLLVKGAVPGAKGSDVVVRPAVKA", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MSSARPVRAARGTTLTARSWSTEAPLRMLQNNLDPEVAERPDDLVVYGGTGKAARNWASFDAIVRELTTLSDDETLLVQSGKPVGVLRTHEWAPRVLLANSNLVGDWANWPEFRRLDALGLMMYGQMTAGSWIYIGTQGILQGTYETFAAVAERRFGGTLAGTLTITAGLGGMGGAQPLAVTMNEGVALVVECDPERAHRRVKHGYLDEVADGLDQAIEKAEAAKAQRRAYSVAVIGNAAEVLPELLRRGVRADIVTDQTSAHDPLSYLPLGVELEDWEDYASKKPEEFTDRARDSMAKHVEAMVGFMDAGAEVFDYGNSLRGEAQLAGYGRAFDYPGFVPAYIRPLFCEGKGPFRWAALSGDPADIAATDRAILDLFGDDDHLARWIRLAGEKVSFQGLPARICWLGYGERHLAGLRFNEMVASGELKAPLVLGRDHLDCGSVASPYRETEGMADGSDAIADWPLLNALVNTASGATWVSLHHGGGVGMGRSLHAGQVTVADGTALAAQKLERVLTNDPGMGVIRHVDAGYDRAREVATERGVRVPGLA", - "output": "cytoplasm ; urocanate hydratase activity ; histidine catabolic process to glutamate and formamide ; histidine catabolic process to glutamate and formate" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MRNKLNFQNIEHSYAFKELSKLPSIVSSKQLRTNSIFEAVKPELKNVQNDIQMFYSVIEREINSEISQIDLVETELKKSLKNVNKSYAKIMKRRTILSSNGKNKNLAIVDDFNKEVDGLESLITGLKETVHDMIDDLVTADSQLKSNNKSVTKEEINSQHYPLLFEILQKDYNHIFKESNNLSVQDADRKSIELDIEDRTEVKSSDDKDSMNKNINIMPIEDNSITHLSFEGEPIYTKVSHENSNQVTDKGINQLDENTLNQEIKNDNLICQRSLPPKNLSNENVVNDNYADSNCLKEEKKNEVDTSKSKMGTINSTPSSTTMGNGFILPNLTKVVKPTISTTFETVVNREF", - "output": "cytoplasmic vesicle ; vacuole" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MSKARVLLKPSSLTTCLTRAKAFFSSVSQSRSISHQMEMGPSDSERYCYDPVLRWNPEVEDYFTKAYGPDHFARISKALTRPSSYSCIRVNTVKTTSDAVIEKLTKILNDSEEGLKLVQPDGSSPVTKCQIPGLDYVVFVNGSGPHKIEYDSGLENPPKEVLVSRKCAEAVLRGAQVYVPGVLACTAHVEKGDAVAVCVAMEQPGDEGDWSVNMTRGTTLQGLPTDPYYRERSGLYIGMGTAMLSRAGMFRVPNGIAVDLNHRVFRLPSLHNILEGEIFLQNLPSIIVAHALDPQKGERILDMCAAPGGKTTAIAILMNDEGEIVAADRSHNKVLVVQNLSAEMGFTCITTCKLDALKSVCLPTTLNESTILINGDNSSSMTSHSELSSNEEMTSVTSRRSEADKSCEKNDSTEQPNGGDNVSQAYIRKNKGRLKNGRGRTQCQGGRAGKSQGFPPNSFDRVLLDAPCSALGLRPRLFAGLETVVSLRNHGWYQRKMLDQAVQLVRVGGILVYSTCTINPSENEAVVRYALDKYRFLSLAPQHPRIGGPGLVGRCEFPDGYIEEWLKPGEEELVQKFDPSSELDTIGFFIAKFSVGPKD", - "output": "nucleolus ; methyltransferase activity ; RNA binding ; RNA methylation ; rRNA processing" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MALRVTRNTKLNTENKAKVSMAGAKAVPVTLAAASKPGLRPRTALGDIGNKVSEQAQARLPLKKELKTSVTGKVSAKIPPPKPLEKVPPVSEPEVELAETHEPEPVMDEKLSPEPILVDNPSPSPMETSGCAPAEEYLCQAFSDVILAVSDVDADDGADPNLCSEYVKDIYAYLRQLEEEQSVRPKYLLGREVTGNMRAILIDWLIQVQMKFRLLQETMYMTVSIIDRFMQDNCVPKKMLQLVGVTAMFIASKYEEMYPPEIGDFAFVTNNTYTKHQIRQMEMKILRVLNFSLGRPLPLHFLRRTSKIGEVDVEQHTLAKYLMELTLLDYDMVDFAPSQIAAGAFCLALKILDNGEWTPTLQHYLSYTEESLLPVMQHLAKNVVMVNHGLTKHMTIKNKYATSKHAKISTLAQLNCTLVQNLSKAVAKA", - "output": "centrosome ; cytoplasm ; nucleus ; cyclin-dependent protein serine/threonine kinase regulator activity ; cell division ; mitotic cell cycle phase transition" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MKSIVFVALLGLALLAVVCSASEDAHKELLKEVVRAMVVDKTDAVQAEERECRWYLGGCSQDGDCCKHLQCHSNYEWCVWDGTFSK", - "output": "extracellular region ; ion channel inhibitor activity ; toxin activity" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MAKKYDFLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKVKTIEVEGKKVKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSYENIQNWMKSIKENASAGVSRMLLGNKCDIEAKRKVSKETGEKLAKEHGIRFFETSAKSSINVEESFTSLARDILLKSNKKPGPSGREVKLTSTEKKSSSKCLLL", - "output": "bicellular tight junction ; cytoplasmic vesicle ; endocytic vesicle ; endosome ; insulin-responsive compartment ; lamellipodium ; lateral plasma membrane ; neuron projection ; plasma membrane ; recycling endosome ; recycling endosome membrane ; synaptic vesicle ; trans-Golgi network ; trans-Golgi network transport vesicle ; GTP binding ; GTPase activity ; angiogenesis ; bicellular tight junction assembly ; cellular response to insulin stimulus ; cortical actin cytoskeleton organization ; endocytic recycling ; endothelial cell chemotaxis ; Golgi vesicle fusion to target membrane ; neuron projection development ; protein kinase A signaling ; protein localization to cell leading edge ; protein localization to plasma membrane ; protein secretion ; regulation of exocytosis ; trans-Golgi network to recycling endosome transport ; vesicle docking involved in exocytosis" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MAKQKKQSPGTIALNKKALHDYFIEQKFEAGLVLAGWEVKSLRAGKAQLVDSYVLLKDGEAWLMGAHITPLTSASTHVIADPTRTRKLLLNKRELGKLFGAVQQKGYACVALSLYWKKHMIKCEIALAKGKKEFDKRHTEKERDSDREIQRAMRTKGKDD", - "output": "cytoplasm ; RNA binding ; trans-translation" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MSLLVVAPEWLTSAAAELQSIESALSAANAAAAVPTTGLAAAAADEVSTAVATLFAGFGQEYQAISTQLSAFQQQFALTLNSSAGSYSAAEAQSVSILDTLGQDVFGAINAPTEALLGRPLIGNGANGTATSPNGGAGGLLFGNGGIGYSQTGAGIVGGAGGSAGLIGNGGAGGTGGAGATGGAGGNGGWLFGSGGIGGTGGANALGTGGTGGLGGSAGLFGGGGNGGAGGLGISGDLGTGGAGGTGGFLLGDYGVSGAGGDGRTVPLEVVNVTEPVVNVNVNGGHSTPVLIDTGSAGLVMQVKDVGGPLGLLRMGLPSGISMSAYSGGLTYLFATYPTTVDFGNGIVTSTTGVDVVLFSIPTSPYALTTWLNALWSNPLTTPFDAYFQSAGVDGVLGVGPNAVGPGPSIPTQALGGGLGQGLLIDMKGGELVFGPNPLTPEFSISGAPIATLWVSVNGGAPVAVPSIIDSGGVMGTIPSSVIGGSTLPANTNITVYTDNTMTTEVYHYSTNDYQPTVISSGLMNTGFLPFWNQPVYIDYSPAGTGTTVFDMP", - "output": "cell surface ; extracellular region ; aspartic-type endopeptidase activity ; proteolysis" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MNLIYNFSAGPAMIPKDVLYQAKKELQNWNQIGCSIMEISHRSKEFIQVALEAEQDLRDLLNISNSYEILFCQGGARGQFAAVPMNLLGNFKETDYINSGYWSNCALIEAKKYCIPKNISVRQKKNGKSFLLKPSQWNISDNSAYIHYCPNETIDGMSIYEEPNFKNKIIVGDFSSFILSRRINIENYGLIYAGAQKNIGPSGITIILIRKDLIGYASKISPSIFNYYIISKYNSMFNTPPTFSWYLSGLVFKWLKKQGGIKKIEQLNQKKSNLLYQIIDNSNFYINDIDKRNRSQMNVVFHLYNSKLDNLFLKEAKNAGLNALKGHNVIGGMRASIYNAMPLEGVQSLAKFMLYFEKKYG", - "output": "cytoplasm ; O-phospho-L-serine:2-oxoglutarate aminotransferase activity ; pyridoxal phosphate binding ; L-serine biosynthetic process ; pyridoxine biosynthetic process" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MAVVKEVLEIAEKIKNMEIRGAGKIARSAAYALQLQAEKSKATNVDEFWKEMKQAAKILFETRPTAVSLPNALRYVMHRGKIAYSSGADLEQLRFVIINAAKEFIHNSEKALERIGEFGAKRIEDGDVIMTHCHSKAAISVMKTAWEQGKDIKVIVTETRPKWQGKITAKELASYGIPVIYVVDSAARHYMKMTDKVVMGADSITVNGAVINKIGTALIALTAKEHRVWTMIAAETYKFHPETMLGQLVEIEMRDPTEVIPEDELKTWPKNIEVWNPAFDVTPPEYVDVIITERGIIPPYAAIDILREEFGWALKYTEPWED", - "output": "ribose 1,5-bisphosphate isomerase activity ; S-methyl-5-thioribose-1-phosphate isomerase activity ; L-methionine salvage from methylthioadenosine ; pentose catabolic process" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MKVIDQFKNKKVLVLGLAKSGESAARLLDKLGAIVTVNDGKPFEDNPAAQCLLEEGIKVITGGHPLELLDEEFALMVKNPGIPYSNPMIEKALAKGIPVLTEVELAYLISEAPIIGITGSNGKTTTTTMIGEVLTAAGQHGLLSGNIGYPASQVAQIATDKNTLVMELSSFQLMGVQEFHPEIAVITNLMPTHIDYHGLFEEYVAAKWNIQNKMTAADFLVLNFNQDLVKDLASKTEATVVPFSTLEKVDGAYLEDGQLYFRGEVVMAANEIGVPGSHNVENALATIAVAKLRGVDNQTIKETLSAFGGVKHRLQFVDDIKGVKFYNDSKSTNILATQKALSGFDNSKVVLIAGGLDRGNEFDELVPDITGLKKMVILGQSAERVKRAADKAGVAYVEATDIADATRKAYELATQGDVVLLSPANASWDMYANFEVRGDLFIDTVAELKE", - "output": "cytoplasm ; ATP binding ; UDP-N-acetylmuramoylalanine-D-glutamate ligase activity ; cell cycle ; cell division ; cell wall organization ; peptidoglycan biosynthetic process ; regulation of cell shape" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MNIPGMTTGMAPAGATAGAGFPGAGAGMQGMSEQEQAMVKAMHAAMESCPVKTVISGTMGFGLGGVFGLFMASMSYDSTFTPQGKAIMDLPWREQVRRGFKDMGSRSWSSAKNFGIVGALYSGTECCVEGLRAKNDLSNSVISGCITGGILGAKAGPQAAAAGCAGFAAFSAAIDAYMRMPSEE", - "output": "TIM22 mitochondrial import inner membrane insertion complex ; mitochondrion targeting sequence binding ; protein transmembrane transporter activity ; protein insertion into mitochondrial inner membrane" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MTTSTGKINLLGLTQPEMEQFFDSIGEKRFRAGQVMKWIHHFGVSDFAAMTNVGKVLREKLEAVAEIRPPEVVSEDISADGTRKWVIRVASGSCVETVYIPTDDRGTLCVSSQAGCALDCSFCSTGKQGFNSNLTAAEVIGQVWLANKSFGTVPAKVDRAITNVVMMGMGEPLLNFDNVIAAMKIMMDDLGYGISKRRVTLSTSGVVPMIDELAKHIDVSLALSLHAPNDELRNKLVPINKKYPLKVLLESCMGYMSTLGGKRVLTVEYTLLKDVNDQPEHAAQMIELLRDVPCKINLIPFNPFPHSGYERPSNNAIRRFQDLLHHGGFNVTTRTTRGDDIDAACGQLVGQVNDRTRRSERYIAVRQLSADVELPDSAASH", - "output": "cytoplasm ; 4 iron, 4 sulfur cluster binding ; metal ion binding ; rRNA (adenine-C2-)-methyltransferase activity ; rRNA binding ; tRNA (adenine-C2-)-methyltransferase activity ; tRNA binding ; rRNA base methylation" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MKRISPLNTLFYLSLFFSYTFKGLKCTRIYKIGTKALPCSECHDVFDCTGCLFEEKESSHVIPLKLNKKNPNDHKKLQKHHESLKLGDVKYYVNRGEGISGSLGTSSGNTLDDMDLINEEINKKRTNAQLDEKNFLDFTTYNKNKAQDISDHLSDIQKHVYEQDAQKGNKNFTNNENNSDNENNSDNENNSDNENNLDNENNLDNENNSDNSSIEKNFIALENKNATVEQTKENIFLVPLKHLRDSQFVGELLVGTPPQTVYPIFDTGSTNVWVVTTACEEESCKKVRRYDPNKSKTFRRSFIEKNLHIVFGSGSISGSVGTDTFMLGKHLVRNQTFGLVESESNNNKNGGDNIFDYISFEGIVGLGFPGMLSAGNIPFFDNLLKQNPNVDPQFSFYISPYDGKSTLIIGGISKSFYEGDIYMLPVLKESYWEVKLDELYIGKERICCDEESYVIFDTGTSYNTMPSSQMKTFLNLIHSTACTEQNYKDILKSYPIIKYVFGELIIELHPEEYMILNDDVCMPAYMQIDVPSERNHAYLLGSLSFMRNFFTVFVRGTESRPSMVGVARAKSKN", - "output": "transport vesicle ; aspartic-type endopeptidase activity ; entry into host cell by a symbiont-containing vacuole ; protein autoprocessing ; protein processing ; proteolysis" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MVCGCSALLPLPNPRPTMPATPNFLANPSSSSRWIPLQPMPVAWAFVQKTSALLWLLLLGTSLSPAWGQAKIPLETVKLWADTFGGDLYNTVTKYSGSLLLQKKYKDVESSLKIEEVDGLELVRKFSEDMENMLRRKVEAVQNLVEAAEEADLNHEFNESLVFDYYNSVLINERDEKGNFVELGAEFLLESNAHFSNLPVNTSISSVQLPTNVYNKDPDILNGVYMSEALNAVFVENFQRDPTLTWQYFGSATGFFRIYPGIKWTPDENGVITFDCRNRGWYIQAATSPKDIVILVDVSGSMKGLRMTIAKHTITTILDTLGENDFINIIAYNDYVHYIEPCFKGILVQADRDNREHFKLLVEELMVKGVGVVDQALREAFQILKQFQEAKQGSLCNQAIMLISDGAVEDYEPVFEKYNWPDCKVRVFTYLIGREVSFADRMKWIACNNKGYYTQISTLADTQENVMEYLHVLSRPMVINHDHDIIWTEAYMDSKLLSSQAQSLTLLTTVAMPVFSKKNETRSHGILLGVVGSDVALRELMKLAPRYKLGVHGYAFLNTNNGYILSHPDLRPLYREGKKLKPKPNYNSVDLSEVEWEDQAESLRTAMINRETGTLSMDVKVPMDKGKRVLFLTNDYFFTDISDTPFSLGVVLSRGHGEYILLGNTSVEEGLHDLLHPDLALAGDWIYCITDIDPDHRKLSQLEAMIRFLTRKDPDLECDEELVREVLFDAVVTAPMEAYWTALALNMSEESEHVVDMAFLGTRAGLLRSSLFVGSEKVSDRKFLTPEDEASVFTLDRFPLWYRQASEHPAGSFVFNLRWAEGPESAGEPMVVTASTAVAVTVDKRTAIAAAAGVQMKLEFLQRKFWAATRQCSTVDGPCTQSCEDSDLDCFVIDNNGFILISKRSRETGRFLGEVDGAVLTQLLSMGVFSQVTMYDYQAMCKPSSHHHSAAQPLVSPISAFLTATRWLLQELVLFLLEWSVWGSWYDRGAEAKSVFHHSHKHKKQDPLQPCDTEYPVFVYQPAIREANGIVECGPCQKVFVVQQIPNSNLLLLVTDPTCDCSIFPPVLQEATEVKYNASVKCDRMRSQKLRRRPDSCHAFHPEENAQDCGGASDTSASPPLLLLPVCAWGLLPQLLR", - "output": "voltage-gated calcium channel complex ; metal ion binding ; voltage-gated calcium channel activity ; calcium ion transmembrane transport ; detection of light stimulus involved in visual perception ; regulation of monoatomic ion transmembrane transport" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MIQMQSRLSVADNSGARELQCIKVLGGSHRRYAGIGDVIKVSVKDAMPRGRVKKGDVYNALIVRTKKGVRRRDGSVLRFDGNAAVLLNSKLEPIGTRVFGPVARELRSEKFMKIISLAPEVL", - "output": "large ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MDKKAARIRRATRARRKLKELGATRLVVHRTPRHIYAQVIAPNGSEILVAASTVEKAINEQLKYAGNKDAAAAVGKTIAERALEKGITKVSFDRSGFQYHGRVQALADAAREAGLQF", - "output": "cytoplasm ; ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MARYRRHSRSRSRSRYRRRRRRRSRGRRRRTYRRSRRHSRRRRGRRRGYSRRRYSRRGRRRY", - "output": "nucleosome ; nucleus ; DNA binding ; chromosome condensation ; sperm DNA condensation" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MELLEERIKKDGVVLPGNVLKVNSFLNHQIDPQLMMTLGQEFARLFKDAGVTRVLTAEASGIAPGIMAAYCLGVPMVFARKKKPSTVTDAVYTAEVFSYTKQVTNTISVEAKFLDANDRILVIDDFLANGEAAKGLISLAEQAGAEVVGVGVVVEKAFQGGHDWLVNHGYHLEALASIKEFADGQVIFN", - "output": "cytoplasm ; xanthine phosphoribosyltransferase activity ; purine ribonucleoside salvage ; xanthine metabolic process ; XMP salvage" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MIRNSMKSHTELLSWNLLQKEADRVRLNSDSLTCVVPDSNNYESSKQINCIEYDYSRQRVNRTIIDLLIDLANEVKLQEKIDNLINGKKINISENRPALHTALRDLGNKSIMIDGLDIMSAVINTREKIKVISNQIREKKWLGHSGLPITDIVNIGIGGSDLGPRVCINALSNYISKEFNYHFISDVDPASFNDVIAKINPQTTLFIVSSKSFTTKETLLNARKAFALYEDTASIDQHFIAVTAHPERAYQMGIKTVLPIWDWVGGRFSFCSAVNLITAIAIGYEQFVELLAGAHDVDTHVQFTDFKNNIPVLMALIGIWNNNFLNIHNLLILTYSKKLEYFVPYVQQLDMESNGKSIDVNGSMVDYATGPIVWGGLGNQAQHSYFQLLCQGTHRCVGDFITLKTNDEHEINSMCHYKMKVLSEGIQTIENPYGYIPGNMPMNHLILSDCSPYTLGALVALYEHKIFVQSVIWNINPFDQPGIESAKSAHREITLSSES", - "output": "cytoplasm ; carbohydrate derivative binding ; glucose-6-phosphate isomerase activity ; carbohydrate derivative metabolic process ; gluconeogenesis ; glycolytic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MAKSAAIITFLFAALVLFAAFEAPIMVEAQKLCEKPSGTWSGVCGNSNACKNQCINLEGAKHGSCNYVFPAHKCICYFPC", - "output": "extracellular region ; secretory vesicle ; defense response ; defense response to fungus ; killing of cells of another organism" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MRIEKDKELMNILKIMAPGTPLREGLENILRAKTGGLLILGDSDQILKLVDGGFKINSEYSPSYVYELAKMDGSIVLSSDLKKILCANAQLIPDSSIPTFETGTRHRTADRVAKQTGAIVIAISQRRNIITVYKGGIKYVLRDSSIILARANQALQTLEKYVAVLDRVVNNLNILEFKDIATLFDVVTAIQRSEMVMRIVSEIERYICELGNEGRLIDMQLSELIKSVEEDGILLIRDYCRSNMEYEDIYKQIQGLSSEELLNLDGLSKIIGYTGVPLVDTLISPRGYRMINKIPRIPSNVIENLVANFNQLKCVMEASYEQLDNVEGIGEARAKAIKNGLRRLREQIMLDKV", - "output": "ATP binding ; diadenylate cyclase activity ; DNA binding ; DNA repair ; second-messenger-mediated signaling" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MEAKVEKIETNVVKLEIKVEAEKFDAALTKAYNKNKGKYNVPGFRKGKVPMAILKKMYGIEIFYDDAVNIAIDESYNEALKAEDIRPVDYPKVDIVEIGEGKELVYTATVTTYPEVEIGEYKGLDIKKPSYEVSEEEVEKQVKEMQSKNARIETKEEGTIADGNIAIIDFKGFVDGEAFEGGEGTDYPLEIGSGTFIDNFEEQLIGLAIGDKKEVNVTFPENYGKEELNAKPAMFEVTVKGIKAKELPELDDEFAKEVSEFDTLAELKENIKKRLEESNDERAEREFEEAVITSIIETSKIDLPEVMLTKEIDSMMKDLESRLQYQGLSLDQYMEFTGNTMEKMREFMKENAERKVKADIILESVAKAEDVKATDEQLNERALELGRMYGPKDPKKMANILLKAQKGMIEKDIIIENTLKLIKESCK", - "output": "cytoplasm ; peptidyl-prolyl cis-trans isomerase activity ; cell cycle ; cell division ; protein folding ; protein transport" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MQKYISEARLLLALAIPVILAQIAQTAMGFVDTVMAGGYSATDMAAVAIGTSIWLPAILFGHGLLLALTPVIAQLNGSGRRERIAHQVRQGFWLAGFVSVLIMLVLWNAGYIIRSMENIDPALADKAVGYLRALLWGAPGYLFFQVARNQCEGLAKTKPGMVMGFIGLLVNIPVNYIFIYGHFGMPELGGVGCGVATAAVYWVMFLAMVSYIKRARSMRDIRNEKGTAKPDPAVMKRLIQLGLPIALALFFEVTLFAVVALLVSPLGIVDVAGHQIALNFSSLMFVLPMSLAAAVTIRVGYRLGQGSTLDAQTAARTGLMVGVCMATLTAIFTVSLREQIALLYNDNPEVVTLAAHLMLLAAVYQISDSIQVIGSGILRGYKDTRSIFYITFTAYWVLGLPSGYILALTDLVVEPMGPAGFWIGFIIGLTSAAIMMMLRMRFLQRLPSAIILQRASR", - "output": "plasma membrane ; antiporter activity ; xenobiotic transmembrane transporter activity ; sodium ion transport ; xenobiotic transmembrane transport" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MSGFLPFSRPAMGVEELAAVKEVLESGWITTGPKNQALEQAFCQLTGNQHAIAVSSATAGMHITLMALEIGKGDEVITPSLTWVSTLNMISLLGATPVMVDVDRDTLMVTPEAIEAAITPRTKAIIPVHYAGAPADIDAIRAIGERYGIAVIEDAAHAVGTYYKGRHIGAKGTAIFSFHAIKNITCAEGGLIVTDNENLARQLRMLKFHGLGVDAYDRHTWGRAPQAEVLTPGYKYNLTDINAAIALTQLVKLEHLNTRRREIAQQYQQALAALPFQPLSLPAWPHVHAWHLFIIRVDEQRCGISRDALMEALKERGIGTGLHFRAAHTQKYYRERFPTLSLPNTEWNSERICSLPLFPDMTTADADRVITALQQLAGQ", - "output": "UDP-4-amino-4-deoxy-L-arabinose aminotransferase ; lipid A biosynthetic process ; lipopolysaccharide biosynthetic process ; response to antibiotic" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MICLKILRFYQKFLSPLKPAACRYYPSCSEYALWQFQKKNFFLAFLSTFFRILRCNPFFKGGFDYPKVSKNFYPMNLCFKPMFLAKKQLCFLYIPYKNKSFYLIKIIFKRTNQ", - "output": "plasma membrane" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MIPLQHGLILAAILFVLGLTGLLVRRNLLFMLISLEVMINAAALAFIVAGSYWGQPDGQVMYILAISLAAAEASIGLALLLQLYRRRHTLNIDTVSEMRG", - "output": "plasma membrane ; NADH dehydrogenase (quinone) activity ; quinone binding ; ATP synthesis coupled electron transport" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MALSPNSSSLDLTISIPSFSPSPSLGDHHGMRDFDINQTPKTEEDREWMIGATPHVNEDDSNSGGRRRKKLRLTKEQSHLLEESFIQNHTLTPKQKKDLATFLKLSQRQVEVWFQNRRARSKLKHTEMECEYLKRWFGSLKEQNRRLQIEVEELRALKPSSTSALTMCPRCERVTDAVDNDSNAVQEGAVLSSRSRMTISSSSSLC", - "output": "nucleus ; DNA-binding transcription factor activity ; DNA-binding transcription factor activity, RNA polymerase II-specific ; transcription cis-regulatory region binding" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MARYRCCRSQSRSRCRRRRRRCRTRRRRCCRRRRRRVCCRRYTVVRCRRR", - "output": "nucleosome ; nucleus ; DNA binding ; chromosome condensation ; sperm DNA condensation" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MSILKKSLFLVLFLGLVSFSICEEEKREAEEEENEDEIEEESDEKKRESPDRPPGFSPFRIY", - "output": "extracellular region ; toxin activity ; defense response ; vasodilation" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MALSAEGSSGGSRGGSPKAEAASVPSWPQILGRLTDNRDLARGQAAWAMDQIMTGNARPAQIAAFAVAMTMKAPTADEVGELAGVMLSHAHPLPADTVPDDAVDVVGTGGDGVNTVNLSTMAAIVVAAAGVPVVKHGNRAASSLSGGADTLEALGVRIDLGPDLVARSLAEVGIGFCFAPRFHPSYRHAAAVRREIGVPTVFNLLGPLTNPARPRAGLIGCAFADLAEVMAGVFAARRSSVLVVHGDDGLDELTTTTTSTIWRVAAGSVDKLTFDPAGFGFARAQLDQLAGGDAQANAAAVRAVLGGARGPVRDAVVLNAAGAIVAHAGLSSRAEWLPAWEEGLRRASAAIDTGAAEQLLARWVRFGRQI", - "output": "anthranilate phosphoribosyltransferase activity ; magnesium ion binding ; tryptophan biosynthetic process" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MTNRYTTLFANLEKRNEGAFIPFVTIGDPNKALSFEIIDTLVSSGADALELGIPFSDPLADGPTIQEANIRALESGITPKDCFDILTKIRAKYPHIPIGLLLYANLVYANGIENFYQKCLDAGVDSILIADVPAHESKEFRDIAKKVGIAQIFIAPPDASESTLKQISELGSGYTYLLSRVGVTGTETAANMPVEDVLTKLREYNAPKPVLGFGISKPEQVQQAIKAGAAGAISGSATVKIIQNNISNKQKMLNELTYFVKEMKAATLN", - "output": "tryptophan synthase activity" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MSASDGNTAELWVPTGSVTVRVPGKVNLYLAVGDRREDGYHELTTVFHAVSLVDEVTVRNADVLSLELVGEGADQLPTDERNLAWQAAELMAEHVGRAPDVSIMIDKSIPVAGGMAGGSADAAAVLVAMNSLWELNVPRRDLRMLAARLGSDVPFALHGGTALGTGRGEELATVLSRNTFHWVLAFADSGLLTSAVYNELDRLREVGDPPRLGEPGPVLAALAAGDPDQLAPLLGNEMQAAAVSLDPALARALRAGVEAGALAGIVSGSGPTCAFLCTSASSAIDVGAQLSGAGVCRTVRVATGPVPGARVVSAPTEV", - "output": "4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity ; ATP binding ; isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway ; phosphorylation ; terpenoid biosynthetic process" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MSEQNNTEMAFQIQRIYTKDVSFEAPNAPHVFQKDWQPEVKLDLDTASSQLADDVYEVVLRVTVTASLGEETAFLCEVQQAGIFSISGIEGTQMAHCLGAYCPNILFPYARECITSLVSRGTFPQLNLAPVNFDALFMNYLQQQAGEGTEEHQDA", - "output": "cytoplasm ; unfolded protein binding ; protein folding ; protein tetramerization ; protein transport" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MRFEDIGISKVDKVCLVDRLGCQENLVGTVHVTTTHIIFRAENGSKELWLATGLISSVEKGTLTAAGCMLVIRCKHFQVITLLISRDKSCQDLYETLQRAAKPVSVNVTELLAFENREPVEDVRGWRRLDWNSEMTRQGITKSQWTESNINEGYTICDTYPNKLWFPTAASTSVLLGSCKFRSRGRLPVLTYFHQQTEAALCRCAQPLTGFSARCVEDEKLMELVGKANTNSDNLFLVDTRPRVNAMVNKVQGKGFEDERNYSNMRFHFFDIENIHVMRASQARLLDAVTKCRDVTEYWKTLEASGWLKHVRSVVECSLFLAESISRGTSCVVHCSDGWDRTSQVVALCQLLLDPYYRTIHGFQVLIEKDWLGFGHKFDDRCGHVGALNDEAGKEVSPIFTQWLDCIWQIMQQKPRAFQFNERYLIEMHEHVYSCQFGTFIGNCDKDRRDLNLSKRTKSLWTWMDARHDDYMNPFYSPTAHVALLDLDTRAARFTVWTAMYNRFDNGLQPRERLEDLTMAAMEHVGVLESHVAQLRTRLAELKTQQNQQITSTNTPTNMVDSGMSSATDDLKNLSLSHPLDPLSSTLPILERATSQESGVMDSSLYYPDEALTKYSLKWQPLRGADRCSNPACRGEFSSTIERRIHCHLCGMIFCRRCLKVSADERERVCDKCKTD", - "output": "apical plasma membrane ; cytosol ; phosphatidylinositol phosphate phosphatase complex ; plasma membrane ; metal ion binding ; phosphatase binding ; phosphatidylinositol-3-phosphate phosphatase activity ; endocytosis ; nematode larval development ; phosphatidylinositol dephosphorylation ; phosphatidylinositol metabolic process ; regulation of cell migration ; regulation of Wnt signaling pathway ; synapse assembly" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MTDKTPFYITTAISYPNGKPHIGHAYELIATDAMARFQRLDGMDVFFLTGTDEHGQKMQQTARAEGISPEELAQRNSDQFREMGKLLNASNDDFIRTTEERHHETSRNIWNLMADSGDIYKDSYAGWYSVRDEAYYAEDETEVRADGVRYGPQGTPVEWVEEESYFFKLSEYQEKLLKLYEENPDFIGPAERRNEIISFVKSGLKDLSISRTTFDWGIKVPDDPKHVMYVWVDALTNYITATGYIEDRNGPRAKYWPADVHIIGKDIIRFHAVYWPAFLMSAKLPLPKRVYAHGFLLNKGEKMSKSLGNVVDPANLVAHFGLDPVRYFFMREVSFGQDGSYSEEGIATRINADLANGIGNLASRSLSMIVKNCDGQIPTPGAFNDDDKAMLASADGLLAVCREEMGKQLIHRALAAIIAVVSETDRYFASQEPWALKKTDPERMGTVLYVTAEVVRQIGILLQPFMPQSCEKLLDLVAAPADGRDFTALGEAGRLAPGTPLEAPKPVFPRYVAPEA", - "output": "cytoplasm ; ATP binding ; methionine-tRNA ligase activity ; methionyl-tRNA aminoacylation" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MDLLIRLGFLLMCALPTPGERSSRDPKTLLSLSPRQACVPRTKSHRPVCYNDTGDCTDADDSWKQLGEDFAHQCLQAAKKRPKTHKSRPNDRNLEGRLTCQRVRRLLPCDLDIHPSHRLLTLMNNCVCDGAVWNAFRLIERHGFFAVTLYLCCGITLLVVILALLCSITYESTGRGIRRCGS", - "output": "host cell endoplasmic reticulum membrane ; membrane ; suppression by virus of host antigen processing and presentation" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MTHLLIVDDEQDIVDICQTYFEYEGYKVTTTTSGKEAISLLSNDIDIMVLDIMMPEVNGYDIVKEMKRQKLDIPFIYLTAKTQEHDTIYALTLGADDYVKKPFSPRELVLRINNLLTRMKKYHHQPVEQLSFDELTLINLSKVVTVNGHEVPMRIKEFELLWYLASRENEVISKSELLEKVWGYDYYEDANTVNVHIHRIREKLEKESFTTYTITTVWGLGYKFERSR", - "output": "cytoplasm ; DNA binding ; phosphorelay signal transduction system ; regulation of DNA-templated transcription" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MAQGSVSFNDVTVDFTQEEWQHLDHAQKTLYMDVMLENYCHLISVGCHMTKPDVILKLERGEEPWTSFAGHTCLEENWKAEDFLVKFKEHQEKYSRSVVSINHKKLVKEKSKIYEKTFTLGKNPVNSKNLPPEYDTHGRILKNVSELIISNLNPARKRLSEYNGYGKSLLSTKQETTHPEVKSHNQSARAFSHNEVLMQYQKTETPAQSFGYNDCEKSFLQRGGLITHSRPYKGENPSVYNKKRRATNIEKKHTCNECGKSFCRKSVLILHQGIHSEEKPYQCHQCGNAFRRKSYLIDHQRTHTGEKPFVCNECGKSFRLKTALTDHQRTHTGEKSYECLQCRNAFRLKSHLIRHQRTHTGEKPYECNDCGKSFRQKTTLSLHQRIHTGEKPYICKECGKSFHQKANLTVHQRTHTGEKPYICNECGKSFSQKTTLALHEKTHNEEKPYICSECGKSFRQKTTLVAHQRTHTGEKSYECPHCGKAFRMKSYLIDHHRTHTGEKPYECNECGKSFSQKTNLNLHQRIHTGEKPYVCNECGKSFRQKATLTVHQKIHTGQKSYECPQCGKAFSRKSYLIHHQRTHTGEKPYKCSECGKCFRQKTNLIVHQRTHTGEKPYVCNECGKSFSYKRNLIVHQRTHKGENIEMQ", - "output": "nucleus ; DNA-binding transcription factor activity ; metal ion binding ; RNA polymerase II cis-regulatory region sequence-specific DNA binding ; regulation of transcription by RNA polymerase II" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MERITVTLGERSYPITIAAGLFNDPASFMPLKAGEQVMLVTNQTLAPLYLDHVRKVLEQAGVMVDQVILPDGEQYKSLAVLEQVFSALLEKPHGRDTTLIALGGGVIGDLTGFAAACYQRGVRFIQVPTTLLSQVDSSVGGKTAVNHPLGKNMIGAFYQPVSVVVDLDCLKTLPARELSSGLAEVIKYGIILDHDFFVWLENNIDALVALDMQALAYCIRRCCELKAEVVAADERESGLRALLNLGHTYGHAIEAEMGYGVWLHGEAIAAGMVMAAETAHRLGQFSREDIERIKALLLRAGLPVCGPQEMAPGTYLPHMMRDKKVLAGELRLVLPTAIGQAEVRGGVGHDMVLASIAACFPDGMSK", - "output": "cytoplasm ; 3-dehydroquinate synthase activity ; metal ion binding ; nucleotide binding ; amino acid biosynthetic process ; aromatic amino acid family biosynthetic process ; chorismate biosynthetic process" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MDKKLARIRRATRTRQKIKELGTTRLVINRTSRHIYAQIISPTGSEVLVAASSVEKVINQEFKYSGNKEAAAFVGKIIAERALKKGIIKVSFDRSGFQYHGRVQALADNAREAGLNF", - "output": "cytoplasm ; ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MTITPQQLIAMLPLLIVGLTVVVVMLSIAWRRDHFINATLTVIGLNLALLSLYFVGQVGPMDVTPLMRVDGYSMFYTGLVIIASLATSTFAYPWLVGYPDNREEFYLLVLIAALGGILLASANHLASLFLGIELLTLPLFGLIGYAYRQKRSLEASIKYMLLSAAASSFLLFGMALLYAESGSLSFVGLGQSLSDSMVHQPLILAGLGMMIVGLGFKLSLVPFQLWTPDVYQGAPAPVSTFLATASKIAIFAVVMRLFMYAPAADSEAVRLVLSIIAVASILFGNLMAISQTNIKRLLGYSSIAHLGYLLIALVAVQTHELALPLETIGVYLAGYLFSSLGAFGVVSLMSSPYKGPDAESLFSYRGLFWHKPILSAVMTVMMLSLAGIPMTLGFIGKFFVVAMGVSANLWWLTGAVVLGSAIGLYYYLRVTVSLFLSPPQSLVRDTPSNWALTAGGVVVLISAILVLVLGIYPQPLITLVQMAQPLM", - "output": "plasma membrane ; NADH dehydrogenase (ubiquinone) activity ; quinone binding ; ATP synthesis coupled electron transport" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MTESTSRRPAYARLLDRAVRILAVRDHSEQELRRKLAAPIMGKNGPEEIDATAEDYERVIAWCHEHGYLDDSRFVARFIASRSRKGYGPARIRQELNQKGISREATEKAMRECDIDWCALARDQATRKYGEPLPTVFSEKVKIQRFLLYRGYLMEDIQDIWRNFAD", - "output": "cytoplasm ; regulation of DNA repair" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MSQSYINVVGAGLAGSEAAYQIAKRGIPVKLYEMRGVKRTPQHKTSNFAELVCSNSFRGDSLTNAVGLLKEEMRRLDSIIMRTGEAHRVPAGGAMAVDRSGYAQAVTAELENNPLIQVIRNEVTEIPDDAITVIATGPLTSDSLAKKIYKLNGGEGFYFYDAAAPIVDQSSIDMDKVYLKSRYDKGEAAYLNCPMTKEEFIRFYEALINAEEAPFNSFEREKYFEGCMPIEVMAKRGIKTLLYGPMKPVGLEYPQDYKGPRDGDYKAPYAVVQLRQDNAAGSLYNIVGFQTHLKWSEQKRVFSMIPGLEQAHFVRYGVMHRNSYIDSPNLLAPTFATCKNPNLFFAGQMTGVEGYVESAASGLVAGINAVRRFKDEEAVIFPQTTAIGALPYYITHTKSKHFQPMNINFGIIKDLGGPRIRDKKKRYEKIAERSLKDLQQFLTV", - "output": "cytoplasm ; 5,10-methylenetetrahydrofolate-dependent tRNA (m5U54) methyltransferase activity ; flavin adenine dinucleotide binding ; methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase (FADH2-oxidizing) activity" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "KVYGRCELAAAMKRLGLDNYRGYSLGNWVCAAKFESNFNTHATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSGGSGMNAWVAWRNRCKGTDVQAWIRGCRL", - "output": "extracellular region ; lysozyme activity ; defense response to bacterium ; killing of cells of another organism ; metabolic process" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MSKSTAEIRQAFLDFFHSKGHQVVSSSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRAYSRATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAINFAWELLTSEQWFNLPKEKLWVTVYETDDEAYNIWANEVGVPHERIIRIGDNKGGAFASDNFWQMGDTGPCGPCSEIFFDHGDHIWGGPPGSAEEDGDRYIEIWNIVFMQFNRQSDGTMLPLPKPSVDTGMGLERIAAVLQHVNSNYEIDLFRDLIAAVADVTGATDLSSKSLRVIADHIRSCAFLISDGVIPSNENRGYVLRRIIRRAIRHGNMLGAKETFFYKLVAPLIAVMGPAAAELKQQQAMVEQVLKTEEEQFARTLERGLALLDDELSKLTGDTLDGETAFRLYDTYGFPVDLTADVCRERNLKVDEAGFEQAMEAQRRRARESSGFGADYNSLIRVDSASQFSGYDHVQQHATVTALFRNGEAVDEIHAGEEAVVVLNRTPFYGESGGQVGDKGELKNATATFSVTDTQKYGQAIGHVGILTTGTLRVNHSVEALVDVVRRNRIRLNHSATHLLHAALRNVLGEHVAQKGSLVNDKYLRFDFSHFEAMKPEQIRLVEDLVNEQIRRNMPVQTEVMELDAAKEKGAMALFGEKYDDQVRVLTMGDFSTELCGGTHASRTGDIGLFRILTESGTAAGIRRIEAVTGEGAIALLHQQSDLLQDVAHLVKGDIHNLADKVRAVLDRSKMLERELQQLKDQQAAQESASLSSSAKLINGVKLLVSQLDNVEPKMLRTMVDDLKNQLGSAIIVLATTADDKVSLIVGVTKDLTGKVKAGELIADIAQQVGGKGGGRPDMAQAGGTDVQALPAALASVEAWVASRM", - "output": "cytoplasm ; alanine-tRNA ligase activity ; ATP binding ; tRNA binding ; zinc ion binding ; alanyl-tRNA aminoacylation" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MAIQLTRRGALSLLLFLTPAVMPTWYAGSGYYPDESYNEVYAEEVPQTPILDYKVPRWCYTLNIQDGEATCYSPRGGNYHSSLGTRCELSCDRGFRLIGRRSVQCLPSRRWSGTAYCRQMRCHALPFITSGTYTCTNGVLLDSRCDYSCSSGYHLEGDRSRICMEDGRWSGGEPVCVDIDPPKIRCPHSREKMAEPEKLTARVYWDPPVVKDSADGTITRLTLRGPEPGSHFPEGEHVIRYTAYDRAYNRASCKFIVKVQVRRCPTLKPPLHGYLTCTSAGDNYGATCEYHCDGGYERQGTSSRVCQSSRQWSGSPPVCVPMKINVNVNSAAGLLDQFYEKRRLLIISAPDPSNRYYKMQISMLQQSTCGLDLRHVTIIELVGQPPQEVGRIREHQLSANIIEELRQFQHLTRSYFNMVLIDKQGIDRERYMEPVTPEEIFTFIDDYLLSNEELIQRREQRDICD", - "output": "cell surface ; cytoplasm ; excitatory synapse ; extracellular space ; synaptic membrane ; hepatocyte growth factor binding ; identical protein binding ; signaling receptor binding ; angiogenesis ; cell motility ; cell-cell adhesion ; positive regulation of cell migration involved in sprouting angiogenesis ; positive regulation of synapse assembly ; regulation of phosphorylation" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MYYGFDVGGTKIEFGAFNEKLERVATERIPTQTEDYSLLVNDIASLIAKYDAEFGVEGKVGLGIPGMEDAETGALLTSNVPAAKGQFLRKDLEAKIGRSVKIDNDANCFALSEAWDEELKDSPSVLGLILGTGFGGGLVFDGKVFSGYSHVAGELGHSRLPIDAWFHLGEKAPLLECGCGNKGCIDNYLSGRGFELLYAHYYGQEKKAIDIIKANEAGDADAVEHVDRFMELLAICFANLFTCFDPHVVALGGGLSNFALIYDELPKRLPKHLLSVARVPRIIKAKHGDSGGVRGAAFLNIK", - "output": "ATP binding ; N-acetylglucosamine kinase activity ; zinc ion binding ; N-acetylglucosamine metabolic process ; peptidoglycan turnover" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MAYKHILIAVDLSPESKVLVEKAVSMARPYNAKISLIHVDVNYSDLYTGLIDVNLGDMQKRISEETHHALTELSTNAGYPITETLSGSGDLGQVLVDAIKKYDMDLVVCGHHQDFWSKLMSSARQLINTVHVDMLIVPLRDEEE", - "output": "cytoplasm" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MAQERREGGRGREREERDDGMVDKLVHINRVAKVVKGGRRFGFAALVVVGDQKGRVGFGHGKAREVPEAIRKATESAKRDMIFVPLRSGRTLHHDVEGRWGAGRVLLRAAKQGTGIIAGGPMRAVFETLGMHDVVAKSMGSSNPYNMVRATFDALKSQMHPKDVAAARGIKYSTLQARRGTAVAAEE", - "output": "small ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MDKNFYKNSLNIFNSNFSMKANLSEKDKFYADFWEKNQIYQQILRKRRGNPRFILHDGPPYANGDIHIGHALNKILKDIIVRYKTMAGFYSPFVPGWDTHGLPIENKIINQIGSKSTLEIRRKSNDFANSQILAQMAQFKKLNLLTDFKQIYQTNTPNYEAKQLKLFKKMVSRGLVYRALKPVYWSPSSQSALAEAEIEYLEYRSPSLFTSFDIKKGNNFVAENDKLIIWTTTPWTLIANSGVAVGENFDYVRIKNEENFYVLAANLLEKLAAIFDWKHYEIIDNFPGKSILGIKYLHPIFEKICPIVSGNHVSLDVGSGLVHLAPLFGEDDYWIGRENNLEMVMHVNDDGKFNENAGQFSGQFYANSNKLITEFLEKKSKILHLSFIDHSFPHDWRTLKPVIYRGTPQWFVSIEKIKKDLEKAIEEIEFPENWLKKRLTKMVVERKDWLISRQRSWGIPLIIFYDQNKEPVLDKPEIFDYIISLVEKFGSRIWYEKTTDELLPEKYQNLGWTKENDILDVWFDSGVSFFAANISDEKPPFDIYFEGSDQYRGWFNSSLINSVIYFGFSPYKKLLSHGFVVDAKGNKMSKSRGNGVDPLVILSKYGCDIFRLWVANSEYYNDIVYSEAIFEQNVEIYRKIRNTVRFLITNLADFKPKKYELTEVDLYIFNKIQKLKNEIIQNYDQNRFVRVVKIINNFIIEFSNFYLSIVKDILYADKKESLKRRQVQYNLYELLQVLNIAIAPIMPTTAEEIYSFIQKNNKQISVHMEEFFKESHFDEELVAKWDEFFQIKDSVYQLIEQKIKSKEIKRPNEVGVLLKTDSDFIKSIDLEKLLMVAKVEFSNEKTEILQLNWEKCPRCWNHFEKINKVCARCFEVLSEIVPEKNS", - "output": "cytoplasm ; aminoacyl-tRNA editing activity ; ATP binding ; isoleucine-tRNA ligase activity ; tRNA binding ; zinc ion binding ; isoleucyl-tRNA aminoacylation" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "VIGGDICNINEHNFLVALYE", - "output": "extracellular region ; serine-type peptidase activity ; toxin activity ; proteolysis" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MPTINQLVRKPRQSKIKKSDSPALNKGFNSKKKKFTDLNSPQKRGVCTRVGTMTPKKPNSALRKYARVRLSNNIEINAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGALDTSGVDGRRQGRSLYGTKKPKN", - "output": "small ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; tRNA binding ; translation" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MLKSVIENVHALEIFDSRGNPTVEVHVTLSNGVVGKAEVPSGASTGENEAVELRDGGSRLGGKGVSKAVNNVNTEINDALKGMDPFDQPKIDQTMIDLDGTPNKGRLGANAILGVSMATAVAAANANRQPLYRYLGGIDLEMPQTFHNVINGGEHADNGIDIQEFMITPIAKTSFRDGFEKIVNVYHTLKKVLEDMGYETGLGDEGGFAPNMKNSEEALKALHESIIKAGYKPGEDIGIACDCAASYFYNKEDGKYHLEGKVLTDDELAAYYDKLLDEFPELMSMEDPYDENDVEGMVKFTATHKDRIQIVLDDFICTNPALLKKAIKEGAGNASLIKLNQIGTVTETLETIRMSRKNGYNTMISHRSGETGDTFIADLAVAINGGQLKTGAPARSERVEKYNRLLEIEEELGKGERLAFFPDDVDHD", - "output": "cell surface ; extracellular region ; phosphopyruvate hydratase complex ; magnesium ion binding ; phosphopyruvate hydratase activity ; glycolytic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MIYKVFYQETKDQSPRRESTKALYLNIDATDELDGRIKARRLVEDNTYYNVEFIELLSDKHLDYEKETGVFELTEF", - "output": "DNA-directed RNA polymerase complex ; DNA binding ; DNA-directed 5'-3' RNA polymerase activity ; DNA-templated transcription" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MIKALFNKNTALAAVAILALSGGAMAESAKTHKTDMAKKKVSELTCEDFNGLEESFKPTVVGWVVGFNKKGKEEDAVIDVDGIETVTPAIIEACKQEPKASFWKKAEAELKKVF", - "output": "outer membrane-bounded periplasmic space ; cellular stress response to acidic pH" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MSQTEEKKGIGRRVQAFGSFLSSMIMPNIGAFIAWGFIAAIFIDNGWLPNKDLATLAGPMITYLIPLLIAFSGGRLIYDLRGGIIAATATMGVIVALPDTPMLLGAMIMGPLVGWLMKKTDQLIQPRTPQGFEMLFNNFSAGILGFIMTIAGFKILAPLMKFIMHILSVAVEALVHAHLLPLVSILVEPAKIVFLNNAINHGVFTPLGADQAAKAGQSILYTIESNPGPGLGILLAYMIFGKGTAKATSYGAGIIHFLGGIHEIYFPYVLMRPLLFIAVILGGMTGVATYQATGFGFKSPASPGSFIVYCLNAPRGEFLHMLLGVFLAALVSFVVAALIMKFTREPKQDLEAATAQMENTKGKKSSVASKLVSSDKNVNTEENASGNVSETSSSDDDPEALLDNYNTEDVDAHNYNNINHVIFACDAGMGSSAMGASMLRNKFKKAGINDITVTNTAINQLPKDAQLVITQKKLTDRAIKQTPNAIHISVDNFLNSPRYEELLNNLKKDDQA", - "output": "plasma membrane ; kinase activity ; protein-N(PI)-phosphohistidine-mannitol phosphotransferase system transmembrane transporter activity ; phosphoenolpyruvate-dependent sugar phosphotransferase system ; phosphorylation" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MKQYLDLMRHVRDTGTKKEDRTGTGTVSVFGYQMRFDLSEGFPLVTTKKCHLKSIIHELLWFLKGETNTQYLTDNGVRIWNEWATEEGDLGPVYGAQWRSWPTPDGGSLDQFALLVEQIKNKPDSRRHIISAWNPALLPDEGVSPQDNVRNGKMALPPCHTLFQFYVADNKLSCQLYQRSADIFLGVPFNIASYALLTMMVAQVTGLELGDFVHTFGDAHLYLNHLEQVETQLAREPLPLPTMKINPEVKDIFSFKFEDFELVDYQAHPHISAPISI", - "output": "cytoplasm ; thymidylate synthase activity ; dTMP biosynthetic process ; dTTP biosynthetic process ; methylation" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MGETTVEVRKVKNYINGKWIESSTSLYEDVVNPATKEVICQVPLSTKADVEYAVEAAKTAFAKWSKVAVPRRARILFNYQQLLQRDKEELARLITIENGKNLTEARGEVQRGIENVEFAAGAPSLMMGDSLPMIATDVEASNYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNAFLLKPSERTPLLTEKLADLLTEAGVPDGVFNVVYGAHDVVNGMLEHPDIKAISFVGSKPVGEYVYKKASENLKRVQALTGAKNHTIVLNDADLDDAVTNIAGAAFGSAGERCMACAVVTVEEGIADAFVAKLKAKAESLVMGNGLDDGVFLGPVIREENKNRTIAYIEKGVEEGATLVCDGRSRVSADGYFIGPTIFENVTTDMTIWKDEIFAPVLSIIRVKNLDEGIQIANRSEFANGACLFTTNAAAVRYFRENIDAGMLGINLGVPAPMAFFPFSGWKSSFYGTLHANGKDSVDFYTRKKVVTARYPKPSFD", - "output": "malonate-semialdehyde dehydrogenase (acetylating) activity ; malonate-semialdehyde dehydrogenase (acetylating, NAD+) activity ; methylmalonate-semialdehyde dehydrogenase (acylating) activity ; inositol catabolic process" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MRILGLDVGTKTVGVAISDEMGWTAQGLETIKINEERGQFGFDRISELVKQYDVDKIVVGLPKNMNGTIGPRGEACQQFAENLRELLQLDVVMWDERLSTMAAERLLISADVSRKKRKQVIDKMAAVVILQGFLDSK", - "output": "cytoplasm ; nuclease activity ; rRNA 5'-end processing" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MVTINISNPVYFSDIKDVESEFLTSIPNGLTHEEAQNRLSEYGENRLEADSGVSAWKVLLRQVLNAMCVVLILAAALSFGTTDWIEGGVISAIIVLNITVGFIQEYKAEKTMDSLRTLASPMAHVTRSSKTDAIDSHLLVPGDVVVLKTGDVVPADLRLVETVNFETDEALLTGESLPVIKDAHATFQMNEDVPIGDRINLAYSSSIVTKGRAKGICYATGMQTQIGAIAAGLRQKGKLFQRPEKDEPNYRRKLNKYYLKVTSYYVQRVLGLNVGTPLQRKLTVLAYILFCIAIILAIIVMAAHSFHVTNEVSIYAISLGISIIPESLIAVLSITMAMGQKNMSKRRVIVRKLEALEALGGVTDICSDKTGTITQGKMITRRVWIPSYGYLSVDTSDANNPTIGTVSGLEAAMQDVLKEKKQEMKNIDPSNQPSDQFIPLLKTCALCNLSTVNQTETGEWVVKGEPTEIALHVFSKRFNYGKEDLLKTNTFVREYPFDSEIKRMAVIYEDQQGQYTVYAKGAVERILERCSTSNGSTLEEPDRELIIAQMETLAAEGLRVLALATKVIDKADNWETLPRDVAESSLEFVSLVGIYDPPRTESKGAVELCHRAGIRVHMLTGDHPETAKAIAREVGIIPPFISDRDPNMSWMVMTGSQFDALSDEEVDSLKALCLVIARCAPQTKVKMIEALHRRKAFVAMTGDGVNDSPSLKQANVGIAMGQNGSDVAKDASDIVLTDDNFSSIVNAIEEGRRMFDNIMRFVLHLLVSNVGEVILLVVGLAFRDEVHLSVFPMSPVEILWCNMITSSFPSMGLGMELAQPDVMERLPHDNKVGIFQKSLIVDMMVYGFFLGVVSLMTWVVIMYGFGTGNLSYDCNAHYHAGCNDVFKARSAVFAVVTFCILIMAVEVKNFDNSLFNLHGIPWGEWNFRYFLHTLVENKFLAWAIALAAVSVFPTIYIPVINRDVFKHTYIGWEWGVVAVAVMFYFFYVEIWKSIRRSLTNPQKKGKFRRTLSNTITTESKLSEKDLEHRLFLQSRRA", - "output": "fungal-type vacuole ; plasma membrane ; ATP binding ; ATP hydrolysis activity ; P-type calcium transporter activity ; P-type potassium transmembrane transporter activity ; calcium ion transmembrane transport ; intracellular calcium ion homeostasis ; potassium ion export across plasma membrane ; sequestering of calcium ion" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "ASYKVKLITPDGPIEFDCPDDVYILDQAEEAGHDLPYSCRAGSCSSCAGKIAGGAVDQTDGNFLDDDQLEEGWVLTCVAYPQSDVTIETHKEAELVG", - "output": "chloroplast ; cytoplasm ; 2 iron, 2 sulfur cluster binding ; electron transfer activity ; metal ion binding ; ferredoxin metabolic process" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MPVAYTFPVLPSSCLLCGISNRSTSFVVDRPELQISGLLVVRSESGEFFGSGLSLRRFQREGRRRLNAAGGGIHVVDNAPSRTSSLAASTSTIELPVTCYQLIGVSEQAEKDEVVKSVINLKKTDAEEGYTMEAAAARQDLLMDVRDKLLFESEYAGNLKEKIAPKSPLRIPWAWLPGALCLLQEVGQEKLVLDIGRAALRNLDSKPYIHDIFLSMALAECAIAKAAFEVNKVSQGFEALARAQSFLKSKVTLGKLALLTQIEESLEELAPPCTLDLLGLPRTPENAERRRGAIAALRELLRQGLSVEASCQIQDWPCFLSQAISRLLATEIVDLLPWDDLAITRKNKKSLESHNQRVVIDFNCFYMVLLGHIAVGFSGKQNETINKAKTICECLIASEGVDLKFEEAFCSFLLKQGSEAEALEKLKQLESNSDSAVRNSILGKESRSTSATPSLEAWLMESVLANFPDTRGCSPSLANFFRAEKKYPENKKMGSPSIMNHKTNQRPLSTTQFVNSSQHLYTAVEQLTPTDLQSPVVSAKNNDETSASMPSVQLKRNLGVHKNKIWDEWLSQSSLIGRVSVVALLGCTVFFSLKLSGIRSGRLQSMPISVSARPHSESDSFLWKTESGNFRKNLDSVNRNGIVGNIKVLIDMLKMHCGEHPDALYLKSSGQSATSLSHSASELHKRPMDTEEAEELVRQWENVKAEALGPTHQVYSLSEVLDESMLVQWQTLAQTAEAKSCYWRFVLLHLEVLQAHIFEDGIAGEAAEIEALLEEAAELVDESQPKNAKYYSTYKIRYILKKQEDGLWKFCQSDIQIQK", - "output": "chloroplast ; chloroplast inner membrane ; plastid inner membrane ; protein self-association ; chloroplast fission ; chloroplast organization ; plastid fission" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MRTPCSQHRRDRPSAIGSQLPDADTLDTRQPPLQEIPISSFADKTFTAPAQIRNFCIIAHIDHGKSTLADRMLQLTGVVDERSMRAQYLDRMDIERERGITIKAQNVRLPWRVDKTDYVLHLIDTPGHVDFTYEVSRALEACEGAVLLVDAAQGIEAQTLANLYLALDRDLHIIPVLNKIDLPAADPDRYAAEMAHIIGCEPAEVLRVSGKTGEGVSDLLDEVVRQVPPPQGDAEAPTRAMIFDSVYDIYRGVVTYVRVVDGKISPRERIMMMSTGATHELLEVGIVSPEPKPCEGLGVGEVGYLITGVKDVRQSKVGDTVTSLSRARGAAAEALTGYREPKPMVYSGLYPVDGSDYPNLRDALDKLQLNDAALTYEPETSVALGFGFRCGFLGLLHMEITRERLEREFGLDLISTSPNVVYRVHKDDGTEIRVTNPSDWPEGKIRTVYEPVVKTTIIAPSEFIGTIMELCQSRRGELGGMDYLSPERVELRYTMPLGEIIFDFFDALKSRTRGYASLDYEEAGEQEAALVKVDILLQGEAVDAFSAIVHKDTAYAYGNKMTTKLKELIPRQQFEVPVQAAIGSKIIARENIRAIRKDVLSKCYGGDITRKRKLLEKQKEGKKRMKTIGRVEVPQEAFVAALSTDAAGDKGKK", - "output": "plasma membrane ; GTP binding ; GTPase activity ; ribosome binding ; translation elongation factor activity ; positive regulation of translation" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MASSRCPAPRGCRCLPGASLAWLGTVLLLLADWVLLRTALPRIFSLLVPTALPLLRVWAVGLSRWAVLWLGACGVLRATVGSKSENAGAQGWLAALKPLAAALGLALPGLALFRELISWGAPGSADSTRLLHWGSHPTAFVVSYAAALPAAALWHKLGSLWVPGGQGGSGNPVRRLLGCLGSETRRLSLFLVLVVLSSLGEMAIPFFTGRLTDWILQDGSADTFTRNLTLMSILTIASAVLEFVGDGIYNNTMGHVHSHLQGEVFGAVLRQETEFFQQNQTGNIMSRVTEDTSTLSDSLSENLSLFLWYLVRGLCLLGIMLWGSVSLTMVTLITLPLLFLLPKKVGKWYQLLEVQVRESLAKSSQVAIEALSAMPTVRSFANEEGEAQKFREKLQEIKTLNQKEAVAYAVNSWTTSISGMLLKVGILYIGGQLVTSGAVSSGNLVTFVLYQMQFTQAVEVLLSIYPRVQKAVGSSEKIFEYLDRTPRCPPSGLLTPLHLEGLVQFQDVSFAYPNRPDVLVLQGLTFTLRPGEVTALVGPNGSGKSTVAALLQNLYQPTGGQLLLDGKPLPQYEHRYLHRQVAAVGQEPQVFGRSLQENIAYGLTQKPTMEEITAAAVKSGAHSFISGLPQGYDTEVDEAGSQLSGGQRQAVALARALIRKPCVLILDDATSALDANSQLQVEQLLYESPERYSRSVLLITQHLSLVEQADHILFLEGGAIREGGTHQQLMEKKGCYWAMVQAPADAPE", - "output": "centriolar satellite ; endoplasmic reticulum ; endoplasmic reticulum membrane ; endoplasmic reticulum-Golgi intermediate compartment membrane ; membrane ; MHC class I peptide loading complex ; phagocytic vesicle membrane ; TAP complex ; ABC-type peptide antigen transporter activity ; ADP binding ; ATP binding ; ATP hydrolysis activity ; ATPase-coupled transmembrane transporter activity ; metal ion binding ; MHC class I protein binding ; MHC class Ib protein binding ; peptide antigen binding ; peptide transmembrane transporter activity ; protein homodimerization activity ; TAP1 binding ; TAP2 binding ; adaptive immune response ; antigen processing and presentation of endogenous peptide antigen via MHC class I ; cytosol to endoplasmic reticulum transport ; defense response ; peptide transport ; protein transport ; transmembrane transport" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MSEKEAGIEVQGTVEEALAGGMYRVKVDQGPTVLAYASGKMKKFHIRIIPGDRVKLELSPYDLTRGRITYRDK", - "output": "cytoplasm ; ribosome binding ; rRNA binding ; translation initiation factor activity" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MDVLKITGGIPLKGQVKAAGAKNAMTKLLVASLLSDKKCTFYNVPNIGDVEVTVSLCQEIGMEVRWDRAAGIMEVITKELKTSYIPQRFSGSNRIPILMIGALLGRTDQDIIVPTAGGCPIGQRPVDFHIQALEQLGAVIEYRGMKREGAYFAHAHNGLKGTLITLPYPSVGATENTILAGITARGVTVIKNAAIEPEIVELILFLQKLGAIITIDVDRTIRIQGTRRFYEVEHTVIPDRIEAASWGMAAISSKGKVFVEGAQHLNMITFLNKLREVGGGFDVRSNGIEFFYDGPLQGGLHLETDVHPGFMTDWQQPFVVLLTQSSGTSVVHETVYENRFGYTDTLKEMGADITPFRQCLGGKSCRFASQSFSHSAIIKGATPLVGKEIRIPDLRAGFAYIMAALIANDTSTISGLPFIQRGYENFIGKLADLGANVSLVEEEKNVKEMPENSSKLPLFAELQVN", - "output": "cytoplasm ; UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity ; cell cycle ; cell division ; cell wall organization ; peptidoglycan biosynthetic process ; regulation of cell shape ; UDP-N-acetylgalactosamine biosynthetic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MSTAKLVKTKSSDLLYTRNDLDEKVKLAAIKALNHQVVQFIDLSLITKQAHWNMRGANFIAVHEMLDGFRTAIIEHQDTFAERVVQLGGVALGTVQVVNDRTPLKSYPTNIHSVQEHLKALADRYGAVANDIRKAITEVEDEDTADMFTAASRDLDKFLWFIESNIE", - "output": "cytoplasm ; DNA binding ; ferric iron binding ; oxidoreductase activity, acting on metal ions ; chromosome condensation ; intracellular iron ion homeostasis" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MDGDRSKRDSYWSTSPGGSTTKLVSDSERSGKVDTWLLILAFTQWALSIATVIICIVIAARQGYSMERYSMTVEALNTSNKEVKESLTSLIRQEVITRAVNIQSSVQTGIPVLLNKNSRDVIQLIEKSCNRQELTQLCDSTIAVHHAEGIAPLEPHSFWRCPAGEPYLSSDPEVSLLPGPSLLSGSTTISGCVRLPSLSIGEAIYAYSSNLITQGCADIGKSYQVLQLGYISLNSDMFPDLNPVVSHTYDINDNRKSCSVVATGTRGYQLCSMPTVDERTDYSSDGIEDLVLDILDLKGRTKSHRYSNSEIDLDHPFSALYPSVGSGIATEGSLIFLGYGGLTTPLQGDTKCRIQGCQQVSQDTCNEALKITWLGGKQVVSVLIQVNDYLSERPRIRVTTVPITQNYLGAEGRLLKLGDQVYIYTRSSGWHSQLQIGVLDVSHPLTISWTPHEALSRPGNEDCNWYNTCPKECISGVYTDAYPLSPDAANVATVTLYANTSRVNPTIMYSNTTNIINMLRIKDVKLEAAYTTTSCITHFGKGYCFHIIEINQKSLNTLQPMLFKTSIPKLCKAES", - "output": "host cell plasma membrane ; membrane ; viral envelope ; virion membrane ; exo-alpha-(2->3)-sialidase activity ; exo-alpha-(2->6)-sialidase activity ; exo-alpha-(2->8)-sialidase activity ; host cell surface receptor binding ; viral entry into host cell ; virion attachment to host cell" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MGNCLYPVADDNSTKLAIKEDLLIDFPEDYYPDYNETDVEAAAPCHSCSLLNYSSLPFFILVSILGILASGTILYALLRPLFRWQLYQDRSTLVQLAVGSALFSIVVPILARGLSGALITSLCHLAHLVAYGSAFAQALLIGYHACLGPQLGAGQVPGLRLGVTVGLWGVAALLSLPVVLGSDTSQGLCTVTFSGEWETLRYIHAAACFAIFVLLPLGLLGTKGLKTVLGRAPCPWVDVLWVWFIFWWPQGMTLGLDSLVRSKAIVVSTCPAQQALDMLLDVAEALAILHCVATPLLLAWVCYQATHTSPPSLPLPTTQTSHLDTLGSKS", - "output": "early endosome ; membrane ; recycling endosome ; chemokine binding ; G protein-coupled receptor activity ; chemokine-mediated signaling pathway ; inflammatory response" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MNNYETVFILNPVLSDEQIKETVKKYEDFLVSKGAEMVAKEDWGLRKLAYAIQHKKSGFYHLFEYKAPGDAIEPLELEFRREERMMRYLTVKLDKHAIAWAEKRRKRNKEKA", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MAQQYQPGQRWISDSEAELGLGTVLAQDGRLLTVLYPATGETRQYALRNAPLTRVRFSPGDVITHFENWKMTVREVDDVDGLLVYHGLNAQNELVTLPETQLSNFIQFRLATDRLFAGQIDQLSWFSLRYNTLEHTSRQLQSSLWGLGGVRAQPIAHQLHIAREVADRIAPRVLLADEVGLGKTIEAGLVIHRQLLSGRASRVLILVPENLQHQWLVEMRRRFNLQVALFDAERFMESDAGNPFEDTQLALVALEWLVEDEKAQDALFAAGWDLMVVDEAHHLVWHEDKASREYSLVEQLAEVIAGVLLLTATPEQLGQDSHFARLRLLDPNRFHDLKAFRAESENYRPVAQAVQELLDKGKLSAAAQETIHGFLGAEGDSLLAAVNTGDEEAKSRLIRELLDRHGTGRVLFRNTRAAVQGFPERKLHQYPLPCPVEYLELPVGEHADLYPEVSFQSHSDVSEEERWWRFDPRVDWLIDTLKMLKRVKVLVICAHAETAMDLEDALRVRSGIPATVFHEGMNILERDRAAAYFADEEFGAQVLICSEIGSEGRNFQFSHHLVLFDLPSHPDLLEQRIGRLDRIGQKHTIELHVPFLETSPQARLFQWYHEALNAFLNTCPTGNALQHQFGPRLLPLLESGDDDKWQTLINEARSERERLESELHTGRDRLLELNSGGAGEGEALVEAILDQDDQFSLPIYMETLFDAFGIDSEDHSENALILKPSEKMLDASFPLGDDEGVTITYDRNQALSREDMQFITWEHPMVQGGMDLVLSGSMGNTAVALIKNKALKPGTVLLELIYVSEVVAPRSLQLGRYLPPAALRCLLDPNGNDLASRVSFNTLNDQLESVPRASANKFIQAQRDQLTPRINAGEEKIMPKHAERVAEAQRRLAADTEEELARLTALQAVNPTVRDSELVALRTQREQGLAMLEKAALRLEAIRVLVAG", - "output": "ATP binding ; ATP-dependent chromatin remodeler activity ; DNA binding ; helicase activity ; hydrolase activity, acting on acid anhydrides ; regulation of DNA-templated transcription" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MKTKIIVIVGPTAVGKTALAIEVAKRFNGEVVSGDSQQVYRGLDIGTAKASPEEQAAVLHHLIDVREITESYSAFDFVSEAKMTIEDIHSRGKLAIIAGGTGLYIQSLLEGYHLGGETPHEEILAYRASLEPYSDEELAHLVEQAGLEIPQFNRRRAMRALEIAHFGQDLENQETLYEPLIICLDDERSQLYERINHRVDLMFEAGLLDEAKWLFDHSPNVQAAKGIGYKELFPYFRGEQTFEEASESLKQATRRFAKRQLTWFRNRMQVTFYQIGESGVQDRILSQIEEFLDD", - "output": "ATP binding ; tRNA dimethylallyltransferase activity ; tRNA processing" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MAEPKYKRVLIKLSGEALAGEKGVGIDLPTVQAIAKEIAEVADSGIQIALVIGGGNLWRGEPAAEAGMDRVQADYTGMLGTTMNALVMADSLKQLGVDTRVQTAIDMKSVAEPYIRGRALRHFEKGRIVIFAAGIGSPYFSTDTTAALRAAEIESDAILMAKNGVDGVYNDDPRKNADAVKFDKLTHVEVIKRGLKIMDATASTLSMDNDIDLVVFNMNEPGNIKRVIFGEQIGTTVSNKAELRK", - "output": "cytoplasm ; ATP binding ; UMP kinase activity ; 'de novo' CTP biosynthetic process ; phosphorylation" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MVVLGSTGSIGTNSLEIARKFNIEVEALACAENVKKLNAQIAEFHPKFVYIKDEKLKSKVAHNKIFSGENGICEMLNRCESKTVINALVGFAGLIPSLKIQNSGKILCLSNKESLVVGGKFLDTSKIRAIDSEHFGLKFLLENSAKPAKMIITASGGAFYKTPIKDLSSKKAADALKHPNWNMGAKITIDSATMANKLFEMLEAFWLYGCKNLDALIEPSSSVHALIEFIDGSTAAHLSRTDMKLAIAHAILPNLKSEILKPVDLLSLNLKFEKIDIKKYPIFELKDEVLSNPDLGVIINAANEIAVFAFLQGKCGFLDISSTIFKAVEKFNDLTPENAEDLIKIDKIVRNFARSELRL", - "output": "1-deoxy-D-xylulose-5-phosphate reductoisomerase activity ; metal ion binding ; NADPH binding ; isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway ; terpenoid biosynthetic process" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRGALAQEATQEHGTQGFAVLSYVYEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRGVRHGHLQCLPKED", - "output": "DNA-binding transcription factor activity ; nickel cation binding ; sequence-specific DNA binding ; response to nickel cation" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "GIDPNYRTSRPEVGTHEGHKVYGPVENPKVLGIHGAIVGVDFDLCIADGSCINA", - "output": "3 iron, 4 sulfur cluster binding ; 4 iron, 4 sulfur cluster binding ; metal ion binding" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MTALSVNDYLRQHIRTVPDWPAPGVQFRDITPLLQNPKVFRVLIDAFVHRYMDRALRPDVVAGLDARGFILGAVVAYELNVGFVPIRKKGKLPFTTVEETYELEYGSATVELHADAVQPGDRVLLIDDLIATGGTMMAGKKLLEKLGATVMEGAAIVDLPELGGSARLRASGLPLYTLVDFSGH", - "output": "cytoplasm ; adenine phosphoribosyltransferase activity ; adenine salvage ; AMP salvage ; purine ribonucleoside salvage" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MGKDTIADLLTSIRNADMNKKGTVRVVSTNITENIVKILLREGFIESVRKHQESNRYFLVSTLRHQKRKTRKGIYRTRTFLKRISRPGLRIYANYQGIPKVLGGMGIAILSTSRGIMTDREARLNRIGGEVLCYIW", - "output": "chloroplast ; plastid ; ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MTEYKKVIAQNKKALFNYFIEERLEAGIVLKGSEVQSLRQGKASIEESHATDTGHEVFLYNCHIAEYEKANRFNHATRRPRKLLLHTKEIKKIIGRIRIKGYTLVALSMYFNKKNKVKVELGIAKGKKLHDKRESIQEKDWKRDQSRLIRQK", - "output": "cytoplasm ; RNA binding ; trans-translation" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MSSDTMFINSARLLPTENRKVKQLQRPDRKKHTRGSYAAQKQQLPNGEQPNFGHGQKQSRKRGSGRQKGRDGAAGDSANVGLTEDLKQLLSIPSGSAGSESAQKETSAGQPATGAVADRKRSVPAGGPAGKSSSEPASASSAVDGMPGLGFQSAHVPFSSPVVNHPMLAEPAATGPVLSVPFPGHVAGYMPCVNNTRVQYPLQTRNNVPMSQPMSQPMSQPMSQPMSQPMSQPISPYLPQGFQMHPQSFVGLPVAPMYPQYMSAQYQSPKQQSACQMPLRAQPPLIPSITRNALPCVSSANSTAKASVRSKGSPGSEGGSRRSQNWKSSQNVGYAGATFATDQPALSSLPKPSFV", - "output": "cytoplasm ; RNA binding ; mRNA processing ; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MTAPPVHDRAHHPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGTSFGGALMTTTDVENYPGFRNGITGPELMDEMREQALRFGADLRMEDVESVSLHGPLKSVVTADGQTHRARAVILAMGAAARYLQVPGEQELLGRGVSSCATCDGFFFRDQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFRASKIMLDRARNNDKIRFLTNHTVVAVDGDTTVTGLRVRDTNTGAETTLPVTGVFVAIGHEPRSGLVREAIDVDPDGYVLVQGRTTSTSLPGVFAAGDLVDRTYRQAVTAAGSGCAAAIDAERWLAEHAATGEADSTDALIGAQR", - "output": "cytosol ; flavin adenine dinucleotide binding ; NADPH binding ; protein-disulfide reductase activity ; thioredoxin-disulfide reductase activity ; cell redox homeostasis ; removal of superoxide radicals ; response to hypoxia" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MYCYQCEQTAQGVACVTVGLCGKTAEVAALQDLLIEAAKGLSQYAYRLRQLGIALPEIDAFVLDALFTTVTNVSFDPARLEEQLREAACLRDQLRARYDAACAARHTSPETLSGPALWQPASTRAGLVGTGEAASIAHRLTAQGADLTGLQDLLLYGVKGMAAYACHARILGQTDESVAAFVHEVLTTLAEVPADAEALLGLVLRCGTVSLTVLDLLDRANTGAYGDPQPTPVLMGHRAGKAILVSGHDLKDLAVLLEQTVGLGVDIYTHGEMLPAHGYPELKKYPHLVGHYGGAWQRQRSEFAAFPGPILMTTNCIQNPTAAYRDRLFTCGLVAHPEATALSGRNFAPLIASALAAPGFAEDGPVRHHLAGFGHKAVLGVAPQIIDAVKAGAIRRFVLIGGCDGHESARSYFDDLAGSLPQDAVVLTLGCGKFRVIDHDMGTIAGLPRLLDMGQCNDAYSAIKVAQALAEAFGVGVNDLPLSLVLSWFEQKAVTVLLALLALGVRNIRLGPNLPAFITPPVLKVLVDRFGIMPVGTVAEDLAAMGLAA", - "output": "cytoplasm ; 4 iron, 4 sulfur cluster binding ; hydroxylamine reductase activity ; metal ion binding" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MDLLVDDLFADADGVSPPPPRPAGGPKNTPAAPPLYATGRLSQAQLMPSPPMPVPPAALFNRLLDDLGFSAGPALCTMLDTWNEDLFSGFPTNADMYRECKFLSTLPSDVIDWGDAHVPERSPIDIRAHGDVAFPTLPATRDELPSYYEAMAQFFRGELRAREESYRTVLANFCSALYRYLRASVRQLHRQAHMRGRNRDLREMLRTTIADRYYRETARLARVLFLHLYLFLSREILWAAYAEQMMRPDLFDGLCCDLESWRQLACLFQPLMFINGSLTVRGVPVEARRLRELNHIREHLNLPLVRSAAAEEPGAPLTTPPVLQGNQARSSGYFMLLIRAKLDSYSSVATSEGESVMREHAYSRGRTRNNYGSTIEGLLDLPDDDDAPAEAGLVAPRMSFLSAGQRPRRLSTTAPITDVSLGDELRLDGEEVDMTPADALDDFDLEMLGDVESPSPGMTHDPVSYGALDVDDFEFEQMFTDAMGIDDFGG", - "output": "host cell nucleus ; viral tegument ; DNA binding ; molecular function activator activity ; DNA-templated viral transcription ; regulation of DNA-templated transcription" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MVFCTYCGQSFTRDEHLERHILTHTNVKPFKCFTCHMSFARRDLLQRHYTVHGRDQNQNEIPAVNGMIPKSAGRTPIACSNCAKTKTKCDKKFPCSRCAGRNLRCTLRPTRRASKNANRVGATLESATDVPTEVTTVNVEATSKDTRAQENSSSPSSQKSGTPISIGPIMEETPDIAPPQPFTEQVNGGPTPPEFSPDLQESFMDHNLMSGFPGLTNPSKDSSDDGSSPRFLLDWSQMQMPLGYDNMIQSDLMLDPELSFDPNSVPLAPHADGILSIMPELANGGMESLITPFETPKMSRSFVELGLGNSNPAFHSHRHQSMPSVQSIPNSGNEMPAMIAAQDGWSAFRCTPTLPSSSCPKTAKLNLEQLEETLRNHEGWVSWSPRWEDNDLAGGGDHLTVMQLHESTRDKLLAIMQSFLHKALETHREGRGTSNGSHSPNPSGASNFVLLPPGRVLEYFLRSYSNSFERYFPLTSRSTLDANELMHCYNDRAASILVLLMIAQGAANIPSPEARMLTGGLTEACRISLFDLIERNIIMSGDPIVLHSALLFTVQAAWSGDKWQMDIAMGQRGMYFAMLRHSGVLDRSSHAASAQPQRTLEQLWTDWIQNESRSRLIYSWVMVDQDLALFHDTAPLFSVTEFGAPMPDADRLWHAKSAEQWSSTFERVHEFSSGFSSVGSGARPLSLRDLFRHFLDDDLIPMGIEMTPLQLRLLLHPLQSMVCQFSQLLSCFAPATYRTSISVHPNQAQPSSRNISQSSTRTRLAEVQALLQRWFDLAERYLKANPLCALMQTNLILFHLISLNAVTNFPEIERLARRENVDGTYHQLLWLHKRCIPDVEEAVFHCGQIFRLVRSMPRGVRPPWWAGAIYRVALILWTDSLTHKDALTSTSPQGNGMFPSPIAGPSFAIDALPPDHALIVRYLTKREGVPCVTKLDGSQMGLERAYPVLRHCVEVIDEGCSTRFSDAIRGKLERLSRG", - "output": "nucleus ; DNA binding ; DNA-binding transcription factor activity, RNA polymerase II-specific ; zinc ion binding" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MTPVASTSALNLARSLYEAGIRNEAVLQAVANTPREQFLDAALGHKAYENTALPIGQGQTISQPYIVAKMTEIILQTKPTKVLEIGTGSGYQAAILARLVPQLFTVERIKSLQIQARQRLKRLDLHNIAFKYGDGWEGWPSKGPYDAIMVTAAASSIPDALVSQLADGGILVIPVGEIAQQLLKVTRSGDKYRSEVVEDVRFVPLINGELA", - "output": "cytoplasm ; protein-L-isoaspartate (D-aspartate) O-methyltransferase activity ; methylation ; protein modification process ; protein repair" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MNATTAPLPYSAARLHELAQLLIGNIRELAQAGWTPATSSNFSHRLDEQHAAITVSGRDKGRLVEEDIMVVDFDGQPVGRPLRPSAETLLHTQLYRRFPEIGCVLHTHSPVQTIASRLYAGSGVIRLEGYELLKAFEGNTTHETAVDVPVFANTQDMQVLAAQVEALLDKQSMWGYLIEGHGLYAWGRNMAEARRHLEAFEFLLHCELELLKLRSPR", - "output": "cytoplasm ; methylthioribulose 1-phosphate dehydratase activity ; zinc ion binding ; L-methionine salvage from methylthioadenosine ; L-methionine salvage from S-adenosylmethionine ; monosaccharide metabolic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MEAIKGSDVNVPDAVFAWLLDGRGGVKPLEDNDVIDSQHPCWLHLNYTHPDSARWLASTPLLPNNVRDALAGESSRPRVSRMGEGTLITLRCINGSTDERPDQLVAMRLYMDERFIVSTRQRKVLALDDVVSDLQEGTGPVDCGGWLVDVCDALTDHASEFIEELHDKIIDLEDNLLDQQIPPRGFLALLRKQLIVMRRYMAPQRDVYARLASERLPWMSDDHRRRMQDIADRLGRGLDEIDACIARTGIMADEIAQVMQESLARRTYTMSLMAMVFLPSTFFTGLFGVNLGGIPGGGWRFGFSLFCILLVVLIGGVTLWLHRSKWL", - "output": "plasma membrane ; zinc ion transmembrane transporter activity" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MWQLLSPTALLLLVSVPGTHAEDPPKSVVILDPPWDRLLEKDSVTLKCQGAYPPRDDSTEWRWNGTLISNKASSYSITDATVGNSGEYTCKTGLSAQSDPLRLEVYKGWLLLQAPRWVVQEGESIRLRCHTWKNITIQKVQYFQNGMGKKFSHQNFEYHIPNATLKDGGSYFCRGIIKNYDLSSEPVKVTVQGSKSPSPILSFFLPWHQIIFCLVMGFLFAVDTGLYFSVRKVLRSSKEDWRNGKVTWSRDPADKGG", - "output": "plasma membrane ; IgG binding ; transmembrane signaling receptor activity ; cell surface receptor signaling pathway ; regulation of immune response" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MTQLTENTDELHSIRLAIDPNLITLPIGSKSTSPHSNSTSDGNPESHNTENEEVDNKAGSLPPEQFSNNSAKLIVNPYEKYGRMSLGQLIPLISQQRGPNFKFADINEDILKQELAIENDNGKQESKDDTKAEDGIDTMDIDQNDNSEANTNDIGYNEWSNEPKEDTGILDNTQDTNINGEMESQLTQEEFNKIRKVMLEHINMAMNESSLAMEFVSLLLSPVRESTAVSSMSPFLKKTVNPGSLNSEKVKMPAVSRRDKLSLSILSRGWKLRALNEARAILKKNFTEISSSLKQEHHYWSSIAYNISNKDVLFKIRDKQTTKRSLGLKYGYEDSGSTFRNDRGTAILRGTDEANGLELIPLTLGRTSTVGSVYKGGKFLRVRIFTKIESEGDYILSGESSLDKLFKNHSENSDSKNDDVRLQISKLKFFIFEQELMHQLKKECAYLISYGVTVENEHKIVIELPNEKFEIEYLSLDDDSVVNHEQDAPKANDRRANLMLVTLRMLLIVIYKKNLRQKMVSNTRKHIASTEKDILLIRPLLGKMRHSNHKKLIRKILKECVLEVVPDTELQERSIQSLDKEDFETFDLQDAHIVKLTKDINAFRNVLDVGKTEFTIDMKQSGKLSLILESPNYCNAQVSIKYDNQTSNTHFNTVSTEFKEVEEFLHFLISTYVNPE", - "output": "core mediator complex ; mediator complex ; DNA-binding transcription factor binding ; RNA polymerase II complex recruiting activity ; RNA polymerase II core promoter sequence-specific DNA binding ; transcription coregulator activity ; positive regulation of transcription elongation by RNA polymerase II ; positive regulation of transcription initiation by RNA polymerase II" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MADAFSLQRVLETFRSSLSENKEVYIKYYIAGWQELVSFMNSLGNVFSFISKDVVSKIQILENFLSGENGSNYVTIQSMVKYELENDLVDLTKRGSHPESGCRTLLRLHRALRWLELFLERLRTSTEDSKTSVMCSDAYNESLANHHPWLIRKAVGVAFCALPGRETFFDVMNAGDHTQVVALLGESLPLIAEVYQITEDLYAKNNLLELP", - "output": "cytosol ; endosome membrane ; Golgi apparatus ; nuclear outer membrane ; plasma membrane ; ceramide 1-phosphate binding ; ceramide 1-phosphate transfer activity ; phospholipid binding ; ceramide 1-phosphate transport ; ceramide transport ; intermembrane lipid transfer ; negative regulation of autophagy ; negative regulation of interleukin-1 beta production ; negative regulation of NLRP3 inflammasome complex assembly" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MEGPEIKAVEAVIDNGSFGKRTLRFETGRLAQQADGAVAAYLDDDSMILSTTTAGSSPKENYDFFPLTVDVEEKMYAAGKIPGSFFRREGRPSSEAILACRIIDRPLRPLFPHTLRNEVQVVETVLAVNPDDAYDVIALNAASASTMISGLPFEGPVSGVRLALIDGQWVAFPRWSERERAVFEIVVAGRVIENGDVAIAMIEAGAGKNAWHLIYDEGQTKPDEEVVAGGLEAAKPFIKVICEAQDELKKIAAKETKEFQLFPEYTDELYARIDEIAHKDLDEALSIAEKLPRQDRIHEIKEHVREVLADEFTDMDDAEKDKELGNAFKELQRQIVRRRILTEDYRIDGRGLRDIRTLSAEVDIVPRVHGSALFQRGETQILGVTTLNMLKMEQQIDALSGPQSKRYMHNYEMPPYSTGETGRVGSPKRREIGHGALAEKALVPVLPSREEFPYAIRQVSEAIGSNGSTSMGSVCASTLSLLAAGVPLKAPVAGIAMGLVSGDVDGKHIFKTLTDILGAEDAFGDMDFKVAGTSEFITALQLDTKLDGIPADILAAALQQAKEARATILEVINECIDGPAEMSEFAPRIITTSVPVEKIGEVIGPKGKMINQIQEDTGAEIAIEDDGTVFISSEGGEAAEKAKAIIDQIANPHVPEAGETYNGKVVKTTSFGAFVNLTPGTDGLLHISQIRNLANGERIDAVEDVLKEGDTVEVIVQGVDDRGKISLAIPGFEDQENNARPSRGDRDDRRGGRGRGDRDDRRGGRGRRSERDDRDFDDRDDRPRRRRSDDFEDDYDDRPRRRRSDDRDFDRDDRDDDRPRRRRSADRDFDDRDDRDARDSRDDDRPRRRRSSDRDDRGDRDDRRGGSRGRGRGSDRNPRYATDDNYDDYRADREERTERPRRRVRRDFDPFED", - "output": "cytoplasm ; magnesium ion binding ; polyribonucleotide nucleotidyltransferase activity ; RNA binding ; mRNA catabolic process ; RNA processing" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MAKDLTNYRNFGIFAHVDAGKTTTTERILKLTGKIHKIGEVHEGAATTDFMEQEQERGITIQSAATSCFWKDHQLNIIDTPGHVDFTIEVYRSLKVLDGGVGVFCGSGGVEPQSETNWRYANDSKVARIIYVNKLDRTGADFYKVVKQVKDVLAAEPLVMVLPIGIENDFVGVVDLLTRKAWVWDDSGDPTKYEIKDVPENMTDDVEKYREMLVETAIEQDDEVMEKYLEGEEPDLDTLKRCIRKGTKDLVFFPTYCGSSFKNKGVQLVLDAVVDFLPNPTEIKPQPEIDLEGNETGKFAYVDPEKPLRALAFKIMDDKYGALTFTRIYSGTLSKGDTVLNTFTGKTERIGRLVEMHADSREEIESAQAGDIVAIVGMKNVQTGHTLCDPKEPATLEPMVFPDPVISIAVAAKDKGSVEKLGMALSKMVQEDPSFRVETDAESNETIIKGMGELHLDIKVDILKRTYGVDVEVGKPQVAYRESITKRLEDSYTHKKQSGGSGQFAKIDYMIEPGEVGTGFDFQSKVTGGNVPREFWPAVQKGFETSFEKGMLAGYPCVDMKFTLMDGAFHPVDSSAIAFEIAAKAAYRQSFSKAAPQLLEPIMKVDVFTPDDHVGDVIGDLNRRRGMIKSQDSAATGSRIKADVPLSEMFGYIGDLRTMTSGRGQFSMEFSHYAPCPANVAEVVIKEAKERQEAKSK", - "output": "cytoplasm ; GTP binding ; GTPase activity ; translation elongation factor activity" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MKTAQELRAGNVFMVGSDPMVVQKAEFSKSGRNASVVKMKMKNLLTGAGSEAVYRADDKFDVVVLDRKDCTYSYFADPMYVFMDTEFNQYEVEADNLGDTINYIVDGMEDVCQVTFYDGKAISVELPTTVIREVEYTEPAVRGDTSGKVLKPARLVGTTFEVQVPAFVNTGEKIEIDTRTNEFKKRA", - "output": "cytoplasm ; translation elongation factor activity" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MFGFLIGVFFDRREESKCEPLVKHAPAIEPEASEAENYPLSSSADDKILAEALDAVETTILGSGSCLHVTDTAAMPPAGDSAAAAVMMGSHSPGDRLMIEALESVEASRGLTHSADTCSQRCSIALSAPQSPQSRVPEGPIMDSGQIFAVSGAGEEENWIDDEDMALCAADLQIDPIGDAQSVGGSTAACLPPSQKEEIRILYATDGYPVVCSLHLLLGQALLQELYVIAYSHVTEPSAHGGGLLRATFYLLAATGCERQRQRVRPVFVCSFTGEAADKTREALREGKPLMVQDVIASLDEAQSLALHEDLIIALGTICSAGKTAAAPGGDERNLSYNYVASTLPGLRRTLASLMLQYETRVVAAFRRKYNASFSCPFWFVSKFGPSETSLVAVLRYYLLGATQDDGIAGSFDLQGVKDLAVTFPKPGANASGLTAARLNTFAEFSRFWCCSELAGPKAEKLFREYLKTRVSSDTLYVQSLDSLIEKYRHALRLPAKDFVRFVYLAYHEGYNRAAVEAHMEEALRNGGRAETAATRAQSEFFKGLREMCSMPEYFARNVDVAVKRLPVRVAEEHARLRSYGEIPRSGFWGFCWPSYDVSLRINKICAGPLCCLGTQLADAMVRAPPDDGDKGTCAETAATIIHHDSDASGEEEATVKVCGAHMPRANKRAGDGTRISPACNEADTRAPLARLTALAYSDQRPRGIMPVTLLLYSLDDTSSGADTAVKSEAKAQDRPVPVYRVAMPGGGQAFAVVARDQWDKTVTVDVFSGFMAPKSPPESNGPLGSDKDAAAVDDAWTRALLARAWGTSYARRCAANVGASQLYLNRNEVLSDSLAVCNLPLDLDITLKPSSVGRPSMLTLHMAMRSVREAIVLLWSLLFADAEIDPDTYPVYFYKTQCDAAAGDEEASPQRRGVGGGDDDVAWGEEDVEIEEMWGGYYSQTAMNDDMIWDDAPDPQMDIDSDHPAHEPMDDGAGAAIEEMKTAAAARFCRCERKIGFRICVPIPKPYALAGLSVAKATSALVQQAIVLQEKFVEALDQFIADYEFVDSGVYSAGRSLRLPFFAKVNARGVMVGRLLPFLVFPPKCRDRSEFVAQHADPNNFHVGAARRDNPAPTLIITSVTVRRDVLAQDNRAHGKPRAGTARLADALAAVGIVPGNQQGTPGDACAVDASWLLDSVAMPALREYIDEHFPRHAAEYRDARTDCIRVYEGRICAALRRGGAGYMSGRRSNFTCLKYQHRGASMQTVIASVVVAVNSQGLPYAALQTRCFATKCGSNELQTQFTVTLSATKDV", - "output": "host cell nucleus ; DNA primase activity ; metal ion binding ; bidirectional double-stranded viral DNA replication" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MLSTPVTSQLRLKEFQDVYEPAEDTFALLDALEKDAKKLRQMAEMKNLLTAEIGCGSGCASSFLKSGILKNKPIVHFMSDISNSACRASKITALNNRELYKDDNGLFITVQTSFLDGIRLGNGVDILIFNPPYVPTEFEEIPSEAATIASAWAGGTDGMDVTSTLLNQLKDILSQDGVFYMVAVARNKLHSICEILQKDGFIVNETLKRKAGRETLSILRIYRIGNTIWDE", - "output": "cytosol ; eRF1 methyltransferase complex ; nucleus ; nucleic acid binding ; protein methyltransferase activity ; protein-(glutamine-N5) methyltransferase activity ; protein-glutamine N-methyltransferase activity ; S-adenosylmethionine-dependent methyltransferase activity ; cytoplasmic translational termination ; macromolecule methylation" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MTKSELIERLAGQQSHISAKTVEDAVKEILDHMAITLADGERIEVRGFGSFSLHYRAPRVGRNPKTGDKVELEGKYVPHFKPGKELRDRVNIYD", - "output": "chromosome ; DNA binding ; structural constituent of chromatin ; DNA recombination ; regulation of DNA-templated transcription ; regulation of translation" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MLVLTRKMGEVVTIGDSIRIKVVEMKGNQVRLGIEAPNDMRIYREEIYIKVQRENQIAASWSLADLEKAVTCLGADGKE", - "output": "cytosol ; mRNA 5'-UTR binding ; bacterial-type flagellum organization ; mRNA catabolic process ; negative regulation of translational initiation ; regulation of bacterial-type flagellum assembly ; regulation of carbohydrate metabolic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MNDSLSRLPREPADRLTKPFMRFLRIEATAGIILLLSTLLALGLANTAWSSSFLAFWEMPAGVRLGDIGIYRSLKHWINDGLMTFFFFVIALELKRELVLGELRNPRMAALPVAAALGGMAAPAGIYLLLVGGGPGASGWGTVMSTDTAFVIGCLALLGSRVPGSLRLFLLSLAIFDDIGAILIVAVGYGEPLNWVALGTGGLGFAFVAGIALLGIRSIPVYFAMGSAIWLAFDASGVHATLVGVILGLMTPARRWVSEIRLHAILDRVIAHPPGDHRSRDTAARSDLHRAGVATREAVSPIERLEIALHPWVAFAIMPLFAVSNAGIPIEDANFDVPLTIAIVVAFVVGKPAGIVLFSFLAVKLRLASRPEQLSWSLLAAGSLLTGIGFTMALFIAELAFEPELLIPVKLGVLGASVISAALGFMALTLLTSPNRR", - "output": "plasma membrane ; antiporter activity ; sodium ion transmembrane transporter activity ; regulation of pH" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MEHLPMAFNTTNPLIQVEDDRTGLSVETLKRALADNLFYLQGKFPAIATKNDCYMALAYTIRDRLLQRWLNTFQTYLNCDNRVVCYLSAEYLLGPHLGNNLINLGLWEPVQQAVEESGLSLDELIDIEEEPGLGNGGLGRLAACFMDSLATLEIPAIGYGIRYEFGIFDQEIKDGWQVEITDKWLQLGNPWEIARPESAVLVKLGGHTEPYTDDQGNYRVRWIAGSLVKGIPYDTPILGYKVSTANNLRLWKSEAAESFDFQRFNVGDYYGAVQDKMSSENLTKVLYPNDEQIQGKELRLAQQYFFVSCSLQDMIRIHLSDNPTLENFHEHFAVQMNDTHPSIAVAELMRLLVDEHHYEWQRAWAITEATFGFTNHTLLPEALEKWSLPLFGEMLPRHLEIIYEINQRFLDQVRMKYPNDGDRLARLSIIDEAGEKSVRMAYLATVGSHAINGVAALHSQLVKETILKDFYELWPEKFSNKTNGVTPRRWMVLSNPRLSNLISSRIGDGWIKNLDELKQLEPFADLAGFRQDWCKVKREVKQDLARYIHTRTDLVVNPDSLFDVQVKRIHEYKRQHLNILHVIHLYLQIKNNPNLDVTPRTFIYGGKAAPGYFTAKLIIKLINSVADVVNNDPTIGDRLKVIFLPDYNVKFGQRVYPAADLSEQISTAGKEASGTGNMKFSMNGALTIGTLDGANIEIREEVGAENFFLFGLTTPEVEKTLAEGYQPWEYYNNNANLKAVVDLINSGFFSHGDTALFRPLMDSLLGQDPYLVFADFQAYVDCQNQVGEAYKDQENWARMAILNVARMGKFSSDRTIREYAEDIWAIKPVVIELEDLCPDGQCLLISPNK", - "output": "cytoplasm ; glycogen phosphorylase activity ; linear malto-oligosaccharide phosphorylase activity ; pyridoxal phosphate binding ; SHG alpha-glucan phosphorylase activity ; glycogen catabolic process" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MGKFVVLDHPLIQHKLTIIRRKDTGSNEFRRIVGEIGGLMTYEITRDLPLKDVEIETPMGKTVQKEIAGKKLTIVPILRAGIGMLNGVLDMVPSAKIAVIGMYRDEKTLKPHEYFFKAPKDIAERDCLVVDPMLATGGSANDAIAALKKRGVKEINLAVLVAAPEGIKAVQEANPDVDIYAAAEDEKLMDNGYIFPGLGDAGDRLFGTK", - "output": "GTP binding ; magnesium ion binding ; uracil phosphoribosyltransferase activity ; UMP salvage ; uracil salvage" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MGKESGWDSGRAAVAAVVGGVVAVGTVLVALSAMGFTSVGIAASSIAAKMMSTAAIANGGGVAAGSLVAILQSVGAAGLSVTSKVIGGFAGTALGAWLGSPPSS", - "output": "membrane ; mitochondrion ; apoptotic process ; apoptotic signaling pathway" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MSETPRLLFVHAHPDDESLSNGATIAHYTSRGAQVHVVTCTLGEEGEVIGDRWAQLTADHADQLGGYRIGELTAALRALGVSAPIYLGGAGRWRDSGMAGTDQRSQRRFVDADPRQTVGALVAIIRELRPHVVVTYDPNGGYGHPDHVHTHTVTTAAVAAAGVGSGTADHPGDPWTVPKFYWTVLGLSALISGARALVPDDLRPEWVLPRADEIAFGYSDDGIDAVVEADEQARAAKVAALAAHATQVVVGPTGRAAALSNNLALPILADEHYVLAGGSAGARDERGWETDLLAGLGFTASGT", - "output": "N-acetylglucosaminylinositol deacetylase activity ; zinc ion binding ; mycothiol biosynthetic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MFRQWSVQSGPAPRRPESQAASEELWEQEVERLCASRTPVRMLPYAMADKRFIRELREPEGVKTTFWQRWHRPRRVARQHLREAEQRLARGFGLWEGALYEIGGLFGTGIQSYFTFLRFLLLLNLLTMLLTACFVLLPLVWLRPPELGPALKLRLQCSSSPLPQSDIPRFHNPLWNILTGRAFNNTYLFYGAYRAGPESSSEYSIRLAYLLSPMVCLLLCFCGILQRMAEGLPQQTLLGQRYRTPLSAKVFSSWDFCIRVWEAATIKKHEISNELKMELEEGRRVELAQQQTRAQKACRLLTYLRTNILIVLLVVGAISAIFWATKYSQDNKEESLFLVLQYLPPGVISLVNFLGPQLFTVLIQLENYPPGTEVNLTLIWCVVLKLASLGMFSFSLGQTVLCIGRNKTSCESYGYNACDYQCWENSVGEELYKLIIFNFLLTVAFAFLVSLPRRLLVERFSGWFWTWLDREEFLVPKNVLDIVAAQTVTWMGLFYCPLLPLLNSVFLFLTFYIKKYTLLRNSRASPRRFRASSSTFFFHLVLLLGLLLAAVPLAYVISSTHSSWDCGLFTNYSAPWQVVPELVALQLPLPSQRALRYLSSHAFSFPLLILLSIVLTVCISQSRANARAIQGLRKQLVWQVQEKWHLVDDLSRLLPELSPEPGSPHSRASRPRSFCPGFPCPGSPGPRTPRLAPSNRLSSSSLGAPSASVPASRFHFPSRTEL", - "output": "cytoplasm ; endoplasmic reticulum ; endoplasmic reticulum membrane ; Golgi apparatus ; nuclear membrane ; plasma membrane ; mechanosensitive monoatomic ion channel activity ; protein sequestering activity ; tumor necrosis factor binding ; intracellular zinc ion homeostasis ; negative regulation of protein binding ; negative regulation of protein-containing complex assembly ; regulation of extrinsic apoptotic signaling pathway via death domain receptors" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MDKFRRNGKEDTFRQRRFLYPLLFQENLYAIAYDHYLSRSSSFESMENSSYNDRFSFLTVKRLISRIRQQNGSIVSFGNYNQNKNKLVGHNRNFYSELVLEGLTVVLEVTFSIQSKHYLEGMNEWNSFRSIHSIFPFMEDKFPHSNFLLDIRIPHSTHPEILVRTFRYWIQDAPSLHSLRSVLHEHRNLILSENLDQLILIASKEKTRLSLSVLWNYYVYECESLLVPLWKRFSYSRSLSYGAFLERTTFYRKIEHIVIFSHKSIKDLKKRIWFLKDPSIHYVKDRERFLIALRGTYLLVKKWRYHLTNFWQCHFHLRSQPYRMSIDELSKNCFSFLGYLFSVQMKTFVVKIKMLDDSFITDPITKEFDPIAPTTLLIGYLAKERFCDISGRPTGRLAWTGLTDDNILHRFDRIWRNILHYYSGSSKKDGLYRMKYILRLPCAKTLACKHKSAIRVVRERFGSELFTKSSPKERELISLSFSKTRSQRERIWHSDILQRNPFVNSWWNKQNLQVETPFDR", - "output": "chloroplast ; RNA binding ; mRNA processing ; RNA splicing ; tRNA processing" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MAAPSEAPERRRPFGRRFLTDPTRLFQHNAWDNVEWSEEQEATAKSKVQENSSQLLPQDKQEEYEVNAKRYWDDFYKIHENGFFKDRHWLFTEFPELAPNRNPSQNEDSLCEFSCKEVSKNEGLGSCENGHCTLENRAENQLNLLKSSPRFCTEELAPQKLKQSYEDYPGSSASYRILEVGCGAGNTVFPILQTNNDPGLFVYCCDFSTTAVDLVQSNVEYDSSRCFAFVHDLCNDQSPFPMPDESLDIVILIFVLSAILPEKMQCVINKLSRLLKPGGMILLRDYGRYDLAQLRFKKGQCLSANFYVRGDGTRVYFFTQDELDDLFTRAGLQKIQNLVDRRLQVNRGKQMTMYRVWIQCKYQKPAGPQL", - "output": "cytoplasm ; tRNA (cytosine) methyltransferase activity ; tRNA (cytosine-3-)-methyltransferase activity ; tRNA methylation" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MLELRLVQGSLLKKVLESIKDLVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHYRCDRNISMGMNLANMAKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDKIADFEMKLMDIDSEHLGIPEAEYHAIVRMPSAEFSRICKDLSSIGDTVVISVTKEGVKFSTRGDIGTANIVCRQNTTVDKPEEATVIEMNEPVSLTFALRYLNSFTKATPLSNTVTISLSSELPVVVEYKIAEMGYIRFYLAPKIEEDEEETKP", - "output": "PCNA complex ; DNA binding ; DNA polymerase processivity factor activity ; leading strand elongation ; mismatch repair ; regulation of DNA replication ; translesion synthesis" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MSLSDKDKSAVKALWSKINKSADVIGNDAVSRMIVVYPQTKTYFAHWPDLTPGSTHIKAHGKKVMGGIALAVSKIDDLKAGLSNLSEQHAFKLRVDPANFKILNHCIMVVISSMFPKDFTPEAHVSLDKFLSAVALALAEKYR", - "output": "hemoglobin complex ; heme binding ; iron ion binding ; oxygen binding ; oxygen carrier activity" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MGRSISVSFGLLVVFLSLSGTGADQDCLPGWSFYEGHCYKVFNVKKTWEDAEKFCQKQSNGKHLATIEWLGKANFVAELVTLMKLETHVWIGLRVEDKRQQCSSHWTDGSAVSYENVVHNTKCFGLDQKTGYRTWVALRCELAYHFICMSRVPRGA", - "output": "extracellular region ; toxin activity" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MLKGGMLSRWKMWSPQYKILRNHLINFKSVSTYKNISGVNTKQPKSPRQFGCMPHVTKKRKYKYEEGKTYHGFQCERVEHISEFELTSYTFRYERTGTELWHIDRNDSNNVFSINFRTTPFDSTGLPHILEHLSLCGSQKYPVRDPFFKMLNRSVATFMNAMTGPDYTIYPFSTMNEIDFRNLQHIYLDAVFRPNLAYFDFLQEGWRLENKDIFDKQSKLVIKGVVYNEMKGAFSENAQVFSQNLLNNIFPDHTYRHVSGGNPLEIPKLAYNDLVEFHKKYYHPSNARIYSYGLFDASKTLALLDEEYLSDQSWVDNSYSLIRQQERWTQPRLVHISSRLDNMGTTIDRQNQIAIALLMCDATNIQESFELHVLSEVLIRGPNSPFYKNLIEPNFSGGYNQTTGYSSDTKDTTFVVGLQDLRVEDFKKCIEIFDKTIINSMNDGFDSQHVESVLHNLELSLKHQNPNFGNTLLFNSTALWNHDGDVVSNLRVSDMISGLRESISQNKKYFQEKIEKYFANNNHRLTLTMSPDEAYEDKFKQAELELVEQKVKLLDEVKIEKIYERGLILDSYQKAESNTDLLPCLTMNDVRDPPKWPKLFIQNVQNVRTQICKVPTNEITYFKCMFNITGLSHEETQLMPLFCNVISAMGTTNYNYREFDKHILLKTGGFDFKLHLIEDVRDSKSYSLSVMINTHALNNNVPEMFALCQELIKNVRFDDSERLKMLIENYISYISVGVASSGHLYAMLGATSQVCDAGKLKSLLYGVDHIDFMKNFVHSTSTVDICDKLSTIASKVFNKDNMRGAINTTQSYEPSAISNYEKFLESLPTFGKTQTSRNIHYLDPSCQQYVMNIPVNYCAKALFTVPYLHQDHPTLRVLAKLLSAKYLLPVIREKNGAYGAGAKISSDGIFSFYSYRDPNSTKTLNAFDETYKWLRANQNVIDQQSLFESKLGVLQQLDTPIAPGNIGIDYFLYEVSQEDFESYRSRMLSVTIDDLQCAIENYFGKESMHYGKCILGPVNANLELETSHKWIINN", - "output": "mitochondrial matrix ; metal ion binding ; metalloendopeptidase activity ; protein processing ; proteolysis" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MFLLNSLSRITRGNRSKRHQNLSDASSSSGSFSKKSSTSQLVRTGSPSVEPTALYLQQPFVRTHLVKGNFSTIVSLPRFVDLDEWVALNVYELFTYLNHFYDVFATFCTVKTCPVMSAAANFDYTWLDNNRKPVHLPAPQYIEYVLAWIENRLHDQNVFPTKAGLPFPSNFLVIVKAIYKQMFRIFAHMYYAHYAEILHLSLEAHWNSFFAHFIAFGKEFQLLDKRDTAPLKDLIVVLENQGNI", - "output": "cell cortex ; cell division site ; cell tip ; cytoplasm ; nucleus ; protein kinase activator activity ; cell cycle ; cell division ; positive regulation of protein phosphorylation ; RAM/MOR signaling pathway ; regulation of establishment or maintenance of bipolar cell polarity regulating cell shape ; signal transduction" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "GTPCKCHGYIGVYWFMLAGCPNGYGYNLSCPYFLGICCVKK", - "output": "extracellular region ; nematocyst ; ion channel inhibitor activity ; toxin activity" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MRIDILTLFPEMFAPLEHSIVGKARDKGLLEINYHNFRENAEKARHVDDEPYGGGQGMLLLAQPIFDTMDSIEQTKPRVILLDPAGRTFNQAYAEELAQEEQLIFICGHYEGYDERIKTLVTDEISLGDYVLTGGELAAMTMIDATVRLIPEVIGKEVSHTDDSFSSGLLEYPQYTRPYEYRGMVVPDVLMSGHHENIRKWRLEESLRKTYQRRPDLLENYNFTAEELTIFEKIKAEDTVD", - "output": "cytoplasm ; tRNA (guanine(37)-N(1))-methyltransferase activity" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MSKAQRMRIKLKSFDYKLLDQSARKIVETAKSTGAEVSGPVPLPTDREVITIIRAPHKYKDSREQFEIKTHKRLIDIIKPTQKTVDALMRVELPAGVDIEIKLKEV", - "output": "ribonucleoprotein complex ; ribosome ; structural constituent of ribosome ; tRNA binding ; translation" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MARSIWKGPFVDGYLIKKVQKLMESGKSEMIKTWSRRSTILPIFVGFTFSVHNGNKFIPVSVNEEMVGRKLGEFAPTRTFHGHGADKKIKRK", - "output": "cytoplasm ; small ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MGRGKIEIKRIENSTNRQVTFSKRRAGILKKAREIGVLCDAEVGVVIFSSAGKLSDYCTPKTTSVFPPLSRILEKYQTNSGKILWDEKHKSLSAEIDRVKKENDNMQIELRHMKGEDLNSLQPKELIAIEEALNNGQANLRDKMMDHWRMHKRNEKMLEDEHKMLAFRVHQQEVELSGGIRELELGYHHDDRDFAASMPFTFRVQPSHPNLQQEK", - "output": "nucleus ; DNA-binding transcription factor activity, RNA polymerase II-specific ; protein dimerization activity ; RNA polymerase II cis-regulatory region sequence-specific DNA binding ; cell differentiation ; positive regulation of transcription by RNA polymerase II ; regulation of transcription by RNA polymerase II ; specification of floral organ identity ; specification of stamen identity" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MKICLIDETGTGDGALSVLAARWGLEHDEDNLMALVLTPEHLELRKRDEPKLGGIFVDFVGGAMAHRRKFGGGRGEAVAKAVGIKGDYLPDVVDATAGLGRDAFVLASVGCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDITPRPQVVYLDPMFPHKQKSALVKKEMRVFQSLVGPDLDADGLLEPARLLATKRVVVKRPDYAPPLANVATPNAVVTKGHRFDIYAGTPV", - "output": "cytoplasm ; rRNA (guanine-N2-)-methyltransferase activity" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MSTAKLVKSKATNLLYTRNDVSDSEKKATVELLNRQVIQFIDLSLITKQAHWNMRGANFIAVHEMLDGFRTALIDHLDTMAERAVQLGGVALGTTQVINSKTPLKSYPLDIHNVQDHLKELADRYAIVANDVRKAIGEAKDDDTADILTAASRDLDKFLWFIESNIE", - "output": "cytoplasm ; nucleoid ; DNA binding ; ferric iron binding ; oxidoreductase activity, acting on metal ions ; chromosome condensation ; intracellular iron ion homeostasis" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MQQLIAEITKGQLKTDLPSFRPGDTLRVHVKVVEGTRERIQLFEGVVIKRRGGGISETFTVRKISYGVGVERTFPVHTPRIAKIEVLRRGKVRRAKLYYLRNLRGKKARIKEIR", - "output": "ribonucleoprotein complex ; ribosome ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MAKLLSRNDARKAKHLRIRNKIRKTTNLPRVFVYKSLQNFYAQLFDDKLNKTIVSLGTSKNKEYSGNIAAAKKLGHEMGALLKTKKIDKIVFDRSGYIYHGRVKAFAEAMREEGVKF", - "output": "cytoplasm ; ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MKPETFYNLLAEQNLPLSNQQKEQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIAPILQGLIPNETIKLLDIGAGAGFPSLPMKILYPELDVTIIDSLNKRINFLQLLAQELDLNGVHFYHGRAEDFAQDKNFRAQYDFVTARAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKNALNLLFSKVEDNLSYALPNRDPRYITVVEKKKETPNKYPRKAGMPNKRPL", - "output": "cytoplasm ; rRNA (guanine-N7-)-methyltransferase activity" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MDLDIKEIVKNMDLKFRNIEGKKLLLAISTDKSGKVLMTAFMSEESLEKSIETGFMHYYSTSRDKLWRKGEESGNVQKIINVFRDCDGDALLFTVEQTGWACHEGYMSCFHNKIDLSTGKSTVVGNKLD", - "output": "cytoplasm ; magnesium ion binding ; phosphoribosyl-AMP cyclohydrolase activity ; zinc ion binding ; histidine biosynthetic process" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MKIIAKKDLFINDEIRVREVRLVGLEGEQLGIKPLSEAQSLADASNVDLVLIQPQAVPPVAKLMDYGKFKFEYQKKQKEQRKKQSVVTVKEVRLSPVIDKGDFETKLRNGRKFLEKGNKVKVSIRFKGRMITHKEIGAKVLADFAEATQDIAIIEQRAKMDGRQMFMQLAPISDKK", - "output": "cytoplasm ; translation initiation factor activity" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MHLFTYDLHHDVGGAENMLRLPLDRHERDYLPWERHIHALVVLLVKQGRMSVDELRRGVEGLPSSLAEQASYYEKWGLSVSRILTEKGTVSGHELEQGFLGVPTTDLPQVPRFQVGQRVMVRPFGTTFAYRQPHLRVPGYVHGAVGTIVELPGLFQDPMTGAYGERGTAQPLYRVAFSHRALWPEGAAHAEPGELEDGVVVDVSQPWLEALSEADYAQRLATLHRVAFTPDSNPPQAHKHHHHRHHHDHHHHHHHHHAMHAEHEAHTHDTRYGTEQAAVAKEAALDFPYQPWCEALVQTLTRRGVVRSDELHATLASLDALQNSGAGPQLVARAWSDAAFAEWLLTDAAAAAESLAIRTTNYDADPASAERVGGHRLFSHNHTELRVVANTDTVHNLVCCTLCSCYPTAILGLSPPWYKSKVFRARAVREPRRLLREEFGLVLPEARGIRVHDSTADLRYMVLPQRPQGTEGWSEEHLRTIVTRDSLLGTAVPRVD", - "output": "indole-3-acetonitrile nitrile hydratase activity ; transition metal ion binding ; nitrogen compound metabolic process" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MQVPSPSAREAASMYGTAVAVFLVLLVAVLQGLAPPESPLPYRIPLDPKGDLELSWDVSYTQKTIYFQLLVQELKAGVLFGMSDRGELENADLVVLWTDGDNAYFGDAWSDQRGQIHLDSQQDYQLLRAQRTPKGLCLLFKRPFGTCDPKDYFIEDGTVHLVYGVLEEPFGSLEAINTSGLQKGLQRVQLLKPKISIPALPEDRRTMDIQAHNVLIPSKTTYWCHLTKLPQDFPRHHIVMYEPIITKGNEALVHHIEIFQCTNQFQNITSFSGSCDSKEKPQELKVCRHVLAAWALGARAFYYPEEAGLAFGGSNSSRFLLLEIHYHNPTNIRGRYDNSGIRLHYTAKLRHFNAGIMELGLVYTPVMAIPPKESAFVLTGYCTAKCTQAALPPLGIRIFASQLHTHLTGTKVVTMLVRDGQEIEIVNRDDHYSPNFQEIRMLKKTVYVYPGDVLITSCTYNTEDKNEATVGGLGTQEEMCVNYIHYYPQTQLELCKSHIDPCFLQKYFHLVNRSNLGEYCTCPQASGTTCPQASGTTCPRASVPEQFASVPWNSFSRVVLKALYDFIPVTVHCNKSSAVRFPGKWDLQPLPEIISKLKEPTPRCPTSRDQSSSSLTVVNIGGGKV", - "output": "chromaffin granule lumen ; chromaffin granule membrane ; extracellular space ; secretory granule lumen ; secretory granule membrane ; transport vesicle membrane ; copper ion binding ; dopamine beta-monooxygenase activity ; L-ascorbic acid binding ; dopamine catabolic process ; norepinephrine biosynthetic process ; octopamine biosynthetic process" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MERSALQWVGAPCGSHGPYVFYRAFRFQRRGGGRARVLSLGDFFFVRCRAEEPACIAELQLLWEERTSRQLLSSAKLYFLPEDTPQGRTSDHGEDEVIAVSEKVTVKLEDLAKWAQSDFSKWKCGFRAEPVKPMDVGKNGQKEALMRYRQSTLNSGLNFKDILKEKADLGEDDEDSNLLILSYPQYCRYRSMLKRIQDKPSSILTDQFVLALGGIAVTSKNPQIFYCRDTFDHPTLIENESICDEFAPNLKGRPRKKKPCPQRRDSLNGIKDSNNNSESKAVAKVKCEAKSALPKPKSNNSNCKKGSSEDKSKIAVGEECRADEQAFLVALYKYMKERKTPIERIPYLGFKQINLWTMFQAAQKLGGYETITARRQWKHIYDELGGNPGSTSAATCTRRHYERLILPYERFIKGEEDKPLPPVKPRKQDNSSQEGEAKTKVSGTKRIKNENQKSKKEKDNAQKPQDASEVSSEQEKDQESADQKNFTEHPTAGETKQPNQGPPPLLPEAARPLPMEKIDVTENSSSSEKAKEEVPHLSSFPSLSMPPDEDTVLDATVTKRLHSSADTQEDTKPERRIHKAFTESLENEPPEMPFSTFPVQLPTQSDMEDDKLPEMADYIANCTVKVDQLGNEDIHNALKQTPKVLVVQNFDMFKEKELPGSMSDDSTFGYTPLLYSKGNPGIMSPLAKKKLLSQVSGAALSCSYPYGSPPPLISKKKLNSRDELSSSLSQGPHVPNSDPIAINRPSVIQHVQSFKSKEERKSINDVFKHDMLSKVDPQRCDFSQHCLSSLAESYVPKTDIQDCKDKMTEKRALQHSRVPTFLADFYSSPHLHNLFRHTEHHLNNEQTSKYLPRDMFRESENISTFTQHKHQEKLNLNYHPSLHQQEKKATVEASSDDQPTDLSLPKSIHKQTAKAPGPGLSHSSMAQQEGKGVSLFQAASSQAVSLDCNPKACRVSPMAMTAPKKHSELLHRSGKQQAQRLENLRKMEGMVHPIISRRMSPQNIGAARPLKRGLEELDKVISEKKVRAVSPLHLPKETSVKEKVPDAEGEGSKSLHGLHSGSVLESHKFPLSAPIFPGLYPGTLCTGLNNRLPPGYSHPLQYLKNQTVLSPLMQPLALHSLMVQRQFLTSPANSQQLYRHLATATPVGSSYGDLLHNSIYPLAAINPQAAFPPSQLSSVHPSTKL", - "output": "nucleus ; transcription cis-regulatory region binding ; transcription coactivator activity ; adipose tissue development ; positive regulation of DNA-binding transcription factor activity ; regulation of transcription by RNA polymerase II" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MNAEKSPENHNVDHEEIAKFEAVASRWWDLEGEFKPLHRINPLRLGYIAERAGGLFGKKVLDVGCGGGILAESMAREGATVTGLDMGFEPLQVAKLHALESGIQVDYVQETVEEHAAKHAGQYDVVTCMEMLEHVPDPQSVVRACAQLVKPGGDVFFSTLNRNGKSWLMAVVGAEYILRMVPKGTHDVKKFIKPAELLGWVDQTSLKERHITGLHYNPLTNTFKLGPGVDVNYMLHTQNK", - "output": "cytoplasm ; 2-polyprenyl-6-hydroxyphenol methylase activity ; 2-polyprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity ; 3-demethylubiquinone-9 3-O-methyltransferase activity ; methylation ; ubiquinone biosynthetic process" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MSKKIGLFYGTQTGKTESVAEIIRDEFGNDVVTLHDVSQAEVTDLNDYQYLIIGCPTWNIGELQSDWEGLYSELDDVDFNGKLVAYFGTGDQIGYADNFQDAIGILEEKISQRGGKTVGYWSTDGYDFNDSKALRNGKFVGLALDEDNQSDLTDDRIKSWVAQLKSEFGL", - "output": "electron transfer activity ; FMN binding ; cellular response to iron ion starvation ; electron transport chain" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MSRLTKQQILEQLKNGLIASCQPVDDGPMDSPEIVAAMAKASVIGGAAGLRIEGIDNLKAVRKVVDVPIVGIVKRDLPDSPVRITPFLQDIDDLYHAGADIIAFDGTDRVRPTTIEACARRIQELGAMSMADCSNYKEGMYCQELGVDLIGSTMSGYTGGETPDEPDVQLVRDLVASGCRVMAEGRYNTPELAAVAIENGAYAVTVGSALTRLEHIVSWFVTAIDDRKTGA", - "output": "N-acylglucosamine-6-phosphate 2-epimerase activity ; N-acylmannosamine-6-phosphate 2-epimerase activity ; carbohydrate metabolic process ; N-acetylmannosamine metabolic process ; N-acetylneuraminate catabolic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MLAKRIIPCLDVTGGRVVKGVNFVELRDAGDPVEIAARYNAQGADELTFLDITATSDGRDLILPIIESVASQVFIPLTVGGGVRTVEDVRRLLNAGADKTSFNSAAIANPEVINAASDKYGAQCIVVAIDAKRRTAEDEQRMGADGRAAGPGWDVYSHGGRKNTGLDAVQWAAEMARRGAGEILLTSMDRDGTKSGFDLKLTRAVSDAVPVPVIASGGVGSLDDLADGVTLGGADAVLAASIFHYGEFTVGQAKQRMAERGVPVRL", - "output": "cytoplasm ; imidazoleglycerol-phosphate synthase activity ; lyase activity ; histidine biosynthetic process" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MGDEKLSRHTSLKRARSLSESIKGLFKPSGISGSNNAAAPSSRPGQDQAHSHQTARIITSNVSSPSISPVHSPVLQAAPKHHKLGVPNIAKLSLSPSREPSLNSENEMFSQESFISEKDEDEANLLEREDLQNKKEEKARAKHVRSKEAYVPHHRYTGGSDEVERQPRERLKNFPQNAGSSNPANSNANHVLDQENNFSIDAMLDYDEESKLRRRNSLGVRNHSNRTRSRKNSLSTPRSPPMKNGNDGMNSNATNNVGNGTGNRIYMRGRNQSDSISASSLPKFQEIECKCILDLGHFKVFENGYHEHSLRVLPIITNNKNVDSGDEKDADASVNSGDDGDNDSEANMHKQKSVFSLSGLFKSHKDGNQQQQQQQQQEENGEQINLEKAFSIIPSQRFIKSQTVKKSRTSNLKNGNNDELMKNDGKNIPQIVNPNAAVGAEELKLINALSEKIRKGLKSENTKGNNGEGRSNSNKQEDSDDTEGKAGTTNDDTSHKPCSQKYGKYIGVVGAGAYGVVKICARCKTAKDVLPYSTYSNGKKLFFAVKELKPKPGDQIDKFCTRLTSEFIIGHSLSHPHFEANAMIAGNVSRTTPPKHVFNAPNILKILDLMEYSNSFVEVMEFCASGDLYSLLTRNNISNESNNGSSRLIQTVKEGSGSPLHPLEADCFMKQLLNGVQYMHDHGIAHCDLKPENILFQPNGLLKICDFGTSSVFQTAWEKHVHFQSGAMGSEPYVAPEEFIRDAEYDPRLVDCWSCGIVYCTMVMGQYLWKIAIPEKDSLFKSFLSEIKDDGQFYLFEELRHVSSELNRLRKIALYRTFQVDPTKRITIEQLLQSSWMRKTKCCVVYRPLHTKVSK", - "output": "ATP binding ; protein serine kinase activity ; protein serine/threonine kinase activity ; protein phosphorylation" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MSMANLLLLIVPILIAMAFLMLTERKILGYMQLRKGPNVVGPYGLLQPFADAMKLFTKEPLKPSTSTITLYITAPTLALTIALLLWTPLPMPNPLVNLNLGLLFILATSSLAVYSILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSTLLMNGSFNLSTLIMTQEHLWLLLPTWPLAMMWFISTLAETNRTPFDLAEGESELVSGFNIEYAAGPLALFFMAEYMNIIMMNTLTTMIFLGTTYNAHSPELYTVCFITKTLLLTSLFLWIRTAYPRFRYDQLMHLLWKNFLPLTLALLMWYISMPTTISSIPPQT", - "output": "mitochondrial inner membrane ; mitochondrial respiratory chain complex I ; NADH dehydrogenase (ubiquinone) activity ; aerobic respiration ; mitochondrial electron transport, NADH to ubiquinone ; mitochondrial respiratory chain complex I assembly" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MNTYFRFEWINGEENPCEYNLWRMFQIEPKPKSGANFMKPNLPNTENFSTASSSKIRQLSEQPSCSNSYKKLRHEMGSDNSNIDDPLDDYDDRKKKLAKKKAAFKAKKGYTTGQNKSDNSFEFEVEKSMDRKEPENGDEEESTEDDYRHAYSSVEKSLRKISLLPIQRPSHHTFCVFCSESYPPVEFHFCIFMTAAQKEVNQSVNEFLGKADTINKKMLESLKKFIHTSKVDTIAKHSRMENTSMKKNSDSPKKLKRPSTDPNPISKRFRHISDESTSSSSLAKNKSRSVTPDALPFAMIDSQEHRTQSGRVVKRPNLFCHKEVQIRKETVQKEGLKKKRVNKEKEVEQESTILLGISESERKRNRNMIRRLLANGFELPGDDYVLPPLPADKSTWTREQHKMDIYGPIYCALQSFKPAYTTDMTSEFLEDDGDTEFKSENSESDSDSEDEQKVENDVASSADDIEFIEIVEAERKMDQNLAQQVRSSFVTTAENTENNMLMEDDSSEQGSSKFNRNASRRSTENIEFITIDDDDDDDNDIEIIA", - "output": "RNA-mediated gene silencing" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MGVELAFPKVVGKQVYGSLYDCDENVLKDTKRLEQIIKEAADVGNMNILDIKSWKIGEGVSVVAIILESHITIHTWPEYKFATVDVYSCGPHTSPLKAFNYIVEKLGAKKYTINEADRSSEF", - "output": "adenosylmethionine decarboxylase activity ; spermidine biosynthetic process" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MYGRSGLDRFKKSQTSEPFSVSANPPPVVQQHLSPEALSGQKTQIGAGQSNWHPPDWAIEPRAGVYSLEVVKDGQILDRIHLDRRRHIFGRQHQTCDFVLDHQSVSRQHAAVVPHKNGSIFVIDLGSAHGTFVANERLTKDTPVELEVGQSLRFAASTRIYLLRKNSEALFSRPPPPAEIKLPPPPDASDEEAVVAYNTLLNRYGLSNGESGGMLGKRKEKTGSEAGVAKRMKKVRVSFRDQLGGELAEIVGMSDGADVETEPGPINVKEGSLVGKYESLVRVTLIPKGKVKEEKAFTGGTRGGVTDRLQEAMNMLKRGPKTGIYDDLYGGDSLAKAVGTSWASVSQPAAETECGGVGEEDDNDDLFGD", - "output": "mRNA binding ; protein phosphatase inhibitor activity" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MSPSVALAVLALLSLSGLEAIQRTPKIQVYSRHPPENGKPNFLNCYVSGFHPSDIEVDLLKNGEKMGKVEHSDLSFSKDWSFYLLYYTEFTPNEKDEYACRVNHVTLSGPRTVKWDRDM", - "output": "extracellular region ; MHC class I protein complex ; antigen processing and presentation of peptide antigen via MHC class I ; immune response" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MSKPARRVAVTGAAGQIAYSLLFRIARGDLLGDDQPVILQLLELPHALDALRGVVMELEDCAFPLLQSVEISDDPRVAFRDADYAMLVGSRPRGKGMERRDLLAANAAIFRSQGEALNEVANRQVKVLVVGNPANTNAWVARHYAPDLPADAITAMIRLDHNRAVSKLAARCGVTVDAVSRMAVWGNHSPTMFPDYRHALIDQQPAPMRVGDERWYLDTFIPEVARRGTAIIEARGASSAASAANAAIDQMRDWIRGSGGRWVSMSIVSGGEYGIPRGLMFGMPTICSEGRYRVVPDLEIDALARARIDASVAELVDEMQAVRAILAL", - "output": "L-malate dehydrogenase activity ; malate metabolic process ; tricarboxylic acid cycle" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MSTMLIAVILLTLLALFFGVLLGFAALKFKVEGNPIVDELEAILPQTQCGQCGYPGCRPYAEAIANGDKVNKCPPGGTATMEKLASLMGVEPEPLNAEAQSQVKKVAYIREDECIGCTKCIQACPVDAIIGAGKLMHTVLTADCTGCDLCVEPCPVDCIDMIPVGQNLKNWNWRLNAIPVTLIQETPHEEKRG", - "output": "plasma membrane ; 4 iron, 4 sulfur cluster binding ; electron transfer activity ; metal ion binding" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MLKFQTVRGGLRLLGVRRSSTAPVASPNVRRLEYKPIKKVMVANRGEIAIRVFRACTELGIRTVAVYSEQDTGQMHRQKADEAYLIGRGLAPVQAYLHIPDIIKVAKENGVDAVHPGYGFLSERADFAQACQDAGVRFIGPSPEVVRKMGDKVEARAIAIAAGVPVVPGTNSPINSLHEAHEFSNTYGFPIIFKAAYGGGGRGMRVVHSYEELEENYTRAYSEALAAFGNGALFVEKFIEKPRHIEVQILGDQYGNILHLYERDCSIQRRHQKVVEIAPATHLDPQLRSRLTSDSVKLAKQVGYENAGTVEFLVDKHGKHYFIEVNSRLQVEHTVTEEITDVDLVHAQIHVSEGRSLPDLGLRQENIRINGCAIQCRVTTEDPARSFQPDTGRIEVFRSGEGMGIRLDNASAFQGAVISPHYDSLLVKVIAHGKDHPTAATKMSRALAEFRVRGVKTNIPFLQNVLNNQQFLAGIVDTQFIDENPELFQLRPAQNRAQKLLHYLGHVMVNGPTTPIPVKVSPSPVDPIVPVVPIGPPPAGFRDILLREGPEGFARAVRNHQGLLLMDTTFRDAHQSLLATRVRTHDLKKIAPYVAHNFNNLFSIENWGGATFDVAMRFLYECPWRRLQELRELIPNIPFQMLLRGANAVGYTNYPDNVVFKFCEVAKENGMDVFRIFDSLNYLPNMLLGMEAAGSAGGVVEAAISYTGDVADPSRTKYSLEYYMGLAEELVRAGTHILCIKDMAGLLKPAACTMLVSSLRDRFPDLPLHIHTHDTSGSGVAAMLACAQAGADVVDVAVDSMSGMTSQPSMGALVACTKGTPLDTEVPLERVFDYSEYWEGARGLYAAFDCTATMKSGNSDVYENEIPGGQYTNLHFQAHSMGLGSKFKEVKKAYVEANQMLGDLIKVTPSSKIVGDLAQFMVQNGLSRAEAEAQAEELSFPRSVVEFLQGYIGIPHGGFPEPFRSKVLKDLPRIEGRPGASLPPLNLKELEKDLIDRHGEEVTPEDVLSAAMYPDVFAQFKDFTATFGPLDSLNTRLFLQGPKIAEEFEVELERGKTLHIKALAVSDLNRAGQRQVFFELNGQLRSILVKDTQAMKEMHFHPKALKDVKGQIGAPMPGKVIDVKVAAGAKVVKGQPLCVLSAMKMETVVTSPMEGTIRKVHVTKDMTLEGDDLILEIE", - "output": "cytoplasm ; mitochondrial matrix ; mitochondrion ; ATP binding ; biotin binding ; carboxylic acid binding ; identical protein binding ; metal ion binding ; pyruvate carboxylase activity ; gluconeogenesis ; lipid metabolic process ; NADH metabolic process ; NADP metabolic process ; negative regulation of gene expression ; oxaloacetate metabolic process ; positive regulation by host of viral process ; positive regulation of phospholipid biosynthetic process ; pyruvate metabolic process ; viral release from host cell ; viral RNA genome packaging" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MSTTTLTRREQRAKAQHFIDTLEGTAFPNSKRIYVTGSQHDIRVPMREIQLSPTLIGGSKDNPQFEENEAVPVYDTSGPYGDPEVAINVQQGLAKLRQPWIDARNDSEELDDRSSAYTRERLADDGLDDLRFTGLLTPKRAKAGKCVTQLHYARKGIVTPEMEFIAIRENMGRERIRSEVLRHQHPGMNFGARLPENITPEFVRDEVAAGRAIIPANINHPESEPMIIGRNFLVKVNANIGNSAVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWILRNSPVPIGTVPIYQALEKVNGIAEDLTWEAFRDTLLEQAEQGVDYFTIHAGVLLRYVPMTAKRLTGIVSRGGSIMAKWCLSHHKENFLFEHFREICEICAAYDVSLSLGDGLRPGSIQDANDEAQFSELHTLGELTKIAWEYDVQVMIEGPGHVPMHMIQRNMTEELESCHEAPFYTLGPLTTDIAPGYDHFTSGIGAAMIGWFGCAMLCYVTPKEHLGLPNKEDVKQGLITYKIAAHAADLAKGHPGAQIRDNAMSKARFEFRWEDQFNLALDPFTARAYHDETLPQESGKVAHFCSMCGPKFCSMKISQEVRDYAAAQAIEVGMADMSENFRAKGGEIYLKREEV", - "output": "4 iron, 4 sulfur cluster binding ; carbon-carbon lyase activity ; zinc ion binding ; thiamine biosynthetic process ; thiamine diphosphate biosynthetic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MKIVEVKHPLVKHKLGLMREQDISTKRFRELASEVGSLLTYEATADLETEKVTIEGWNGPVEIDQIKGKKITVVPILRAGLGMMDGVLENVPSARISVVGMYRNEETLEPVPYFQKLVSNIDERMALIVDPMLATGGSVIATIDLLKKAGCSSIKVLVLVAAPEGIAALEKAHPDVELYTASIDQGLNEHGYIIPGLGDAGDKIFGTK", - "output": "GTP binding ; magnesium ion binding ; uracil phosphoribosyltransferase activity ; UMP salvage ; uracil salvage" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MAKKKATFICQECGYQSPKYLGRCPNCSAWSSFVEEVEVKEVKNARVSLAGEKSRPVKLKDVDNISYHRTQTDMSEFNRVLGGGVVPGSLILIGGDPGIGKSTLLLQVSTQLANKGTVLYVSGEESAEQIKLRSERLGDIDNEFYLYAETNMQAIRTEIENIKPDFLIIDSIQTIMSPDITGVQGSVSQVREVTAELMQLAKTNNIATFIVGHVTKEGTLAGPRMLEHMVDTVLYFEGERHHTFRILRAVKNRFGSTNEIGIFEMQSGGLVEVLNPSQVFLEERLDGATGSAVVVTMEGSRPILAEVQSLVTPTVFGNARRTTTGLDFNRVSLIMAVLEKRCGLLLQNQDAYLKSAGGVKLDEPAIDLAVAVAIASSYKEKPTSPQEAFLGEIGLTGEIRRVTRIEQRINEAAKLGFTKVYAPKNALQGIDIPQGIEVVGVTTVGQVLNAVFS", - "output": "ATP binding ; ATP-dependent DNA damage sensor activity ; damaged DNA binding ; hydrolase activity ; metal ion binding ; recombinational repair" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MQVFREKQLLIQAIQKVKSDGKSIGLVPTMGALHEGHLSLVTNALKDSDQVIVSIFVNPTQFDNPEDLEKYPRNLNKDIELLEKETSDIWVFSPTANELYGDKILSQNFDFEGLESVMEGEFRAGHFNGVGTVVKHLFEVITPDKAFFGEKDFQQLQIIRKLIEKTGLPVEIVGCPILREDSGLARSSRNERLSFQNRKEAAFIYEVLQNANRLFGTESAEHTTNWVENQFKNNQHLKLEYFEIADSETLKKVNKKEKGKQYRAFIAAYSDGIRLIDNIALNN", - "output": "cytoplasm ; ATP binding ; pantoate-beta-alanine ligase activity ; pantothenate biosynthetic process" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MKESFYIEGMTCTACSSGIERSLGRKSFVKKIEVNLLNKSANIEFNENETNLDEIFKLIEKLGYSPKKTLAEEKKEFFSPNVKLALAVIFTLFVVYLSMGAMLSPSLLPKSLLAIDNHSNFLNACLQLIGTLIVMHWGRDFYIQGFKALWHRQPNMSSLIAIGTSAALISSLWQLYLVYTDHYTDQWSYGHYYFESVCVILMFVMVGKRIENVSKDKALDAMQALMKNAPKTALKIQNDQQIEVLVDSIVVGDILKVLPGTLIAVDGEIIEGEGELDESMLSGEALPVYKKVGDKVFSGTFNSHTSFLMKATQNNKNSTLSQIVEMIHNAQSSKAEISRLADKVSSVFVPSVIAIAILAFVVWLIIAPKPDFWWNFGIALEVFVSVLVISCPCALGLATLMSILVANQKASSLGLFFKDAKSLEKARLVNTIVFDKTGTLTNGKPVVKSVHSKIELLELLSLANSIEKSSEHVIAKGIVEYAKEHNAPLKEMSEVKVKTGFGISAKTDYQGTKEIIKVGNSEFFNPINTLEIQENGILVLVGRAINEKEDELLGAFVLEDLPKKGVKEHVAQIKNLGINTFLLSGDNRENVKKCALELGIDGYISNAKPQDKLNKIKELKEKGRIVMMVGDGLNDAPSLAMSDVAVVMAKGSDVSVQAADIVSFNNDIKSVYSAIKLSQATIKNIKENLFWAFCYNSVFIPLACGVLYKANIMLSPAIAGLAMSLSSVSVVLNSQRLRNFKIKDH", - "output": "plasma membrane ; ATP binding ; ATP hydrolysis activity ; metal ion binding ; P-type divalent copper transporter activity" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MKDSNRCCCGQFTNQHIPPLPSATPSKNEEESKQVETQPEKWSVAKHTQSYPTDSYGVLEFQGGGYSNKAMYIRVSYDTKPDSLLHLMVKDWQLELPKLLISVHGGLQNFEMQPKLKQVFGKGLIKAAMTTGAWIFTGGVSTGVISHVGDALKDHSSKSRGRVCAIGIAPWGIVENKEDLVGKDVTRVYQTMSNPLSKLSVLNNSHTHFILADNGTLGKYGAEVKLRRLLEKHISLQKINTRLGQGVPLVGLVVEGGPNVVSIVLEYLQEEPPIPVVICDGSGRASDILSFAHKYCEEGGIINESLREQLLVTIQKTFNYNKAQSHQLFAIIMECMKKKELVTVFRMGSEGQQDIEMAILTALLKGTNVSAPDQLSLALAWNRVDIARSQIFVFGPHWPPLGSLAPPTDSKATEKEKKPPMATTKGGRGKGKGKKKGKVKEEVEEETDPRKIELLNWVNALEQAMLDALVLDRVDFVKLLIENGVNMQHFLTIPRLEELYNTRLGPPNTLHLLVRDVKKSNLPPDYHISLIDIGLVLEYLMGGAYRCNYTRKNFRTLYNNLFGPKRPKALKLLGMEDDEPPAKGKKKKKKKKEEEIDIDVDDPAVSRFQYPFHELMVWAVLMKRQKMAVFLWQRGEESMAKALVACKLYKAMAHESSESDLVDDISQDLDNNSKDFGQLALELLDQSYKHDEQIAMKLLTYELKNWSNSTCLKLAVAAKHRDFIAHTCSQMLLTDMWMGRLRMRKNPGLKVIMGILLPPTILFLEFRTYDDFSYQTSKENEDGKEKEEENTDANADAGSRKGDEENEHKKQRSIPIGTKICEFYNAPIVKFWFYTISYLGYLLLFNYVILVRMDGWPSLQEWIVISYIVSLALEKIREILMSEPGKLSQKIKVWLQEYWNITDLVAISTFMIGAILRLQNQPYMGYGRVIYCVDIIFWYIRVLDIFGVNKYLGPYVMMIGKMMIDMLYFVVIMLVVLMSFGVARQAILHPEEKPSWKLARNIFYMPYWMIYGEVFADQIDLYAMEINPPCGENLYDEEGKRLPPCIPGAWLTPALMACYLLVANILLVNLLIAVFNNTFFEVKSISNQVWKFQRYQLIMTFHDRPVLPPPMIILSHIYIIIMRLSGRCRKKREGDQEERDRGLKLFLSDEELKRLHEFEEQCVQEHFREKEDEQQSSSDERIRVTSERVENMSMRLEEINERETFMKTSLQTVDLRLAQLEELSNRMVNALENLAGIDRSDLIQARSRASSECEATYLLRQSSINSADGYSLYRYHFNGEELLFEDTSLSTSPGTGVRKKTCSFRIKEEKDVKTHLVPECQNSLHLSLGTSTSATPDGSHLAVDDLKNAEESKLGPDIGISKEDDERQTDSKKEETISPSLNKTDVIHGQDKSDVQNTQLTVETTNIEGTISYPLEETKITRYFPDETINACKTMKSRSFVYSRGRKLVGGVNQDVEYSSITDQQLTTEWQCQVQKITRSHSTDIPYIVSEAAVQAEHKEQFADMQDEHHVAEAIPRIPRLSLTITDRNGMENLLSVKPDQTLGFPSLRSKSLHGHPRNVKSIQGKLDRSGHASSVSSLVIVSGMTAEEKKVKKEKASTETEC", - "output": "axon ; endoplasmic reticulum membrane ; plasma membrane ; calcium channel activity ; calcium ion import across plasma membrane ; calcium ion transmembrane transport ; cellular response to light stimulus ; G protein-coupled glutamate receptor signaling pathway ; monoatomic cation transmembrane transport ; protein tetramerization ; visual perception" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MCVCQTMEVGQYGKNASRAGDRGVLLEPFIHQVGGHSSMMRYDDHTVCKPLISREQRFYESLPPEMKEFTPEYKGVVSVCFEGDSDGYINLVAYPYVESETVEQDDTTEREQPRRKHSRRSLHRSGSGSDHKEEKASLSLETSESSQEAKSPKVELHSHSEVPFQMLDGNSGLSSEKISHNPWSLRCHKQQLSRMRSESKDRKLYKFLLLENVVHHFKYPCVLDLKMGTRQHGDDASAEKAARQMRKCEQSTSATLGVRVCGMQVYQLDTGHYLCRNKYYGRGLSIEGFRNALYQYLHNGLDLRRDLFEPILSKLRGLKAVLERQASYRFYSSSLLVIYDGKECRAESCLDRRSEMRLKHLDMVLPEVASSCGPSTSPSNTSPEAGPSSQPKVDVRMIDFAHSTFKGFRDDPTVHDGPDRGYVFGLENLISIMEQMRDENQ", - "output": "cytoplasm ; cytosol ; fibrillar center ; nucleoplasm ; nucleus ; ATP binding ; inositol 5-diphosphate pentakisphosphate 5-kinase activity ; inositol diphosphate tetrakisphosphate kinase activity ; inositol heptakisphosphate kinase activity ; inositol hexakisphosphate 1-kinase activity ; inositol hexakisphosphate 3-kinase activity ; inositol hexakisphosphate 5-kinase activity ; inositol hexakisphosphate kinase activity ; inositol-1,3,4,5,6-pentakisphosphate kinase activity ; inositol phosphate biosynthetic process ; inositol phosphate metabolic process ; negative regulation of cold-induced thermogenesis ; phosphatidylinositol phosphate biosynthetic process ; phosphorylation" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MPKYYCEYCDIYLTHSSPVGRRQHVQGRKHISAKIEYFQNLLREEGITPQNFLGFLGPRALNNILGNPMMNNMMPGNFPMHMKHNNMKHHSHYSRRSHRHHMPHGRYGRERHGHYSYSSKYHSHPMHMNSSSMSSMSGFPYNEHSGNFFSLSNSMHGNGKMGNMVIRDLVSNVNIENDLVKDNPNEERNGDSAIANQPSTMHHEEDQDDPANATGGTANNNDNVSINA", - "output": "commitment complex ; U1 snRNP ; U2-type prespliceosome ; mRNA binding ; U1 snRNA binding ; zinc ion binding ; mRNA 5'-splice site recognition ; spliceosomal snRNP assembly" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MGKKRINEVSTTEGAPAEKKKKVEKWLNTSSEDGEGTKKKKRPWRNKVRKLAAKKAAAERRVENSEESTILEPVATAEEATKKKKKRGPKKKKYKPEAAEVEKKNEEGDTVKENPIAEAKKRLDAGRFRMLNEKLYTCTGSEAFDFFKEDRTAFDLYHRGFADQVKKWPNHPLREIIRWLQAKPDKQAVFDLGCGEAKIAEAVGEKHTIRSFDLVAVNDRVESCDMSKLPAEDGSADVVIFCLSLMGTNLYDFIKEARRVLRTGGVLKIGEVTSRFVSIKQFCEAINKMGFETTNRRQLTDYFMMFDFRKIDKVEQKRPYGLKLKPCLYKKR", - "output": "chromatin silencing complex ; nucleolus ; rDNA heterochromatin ; methylated histone binding ; methyltransferase activity ; cellular response to glucose starvation ; methylation ; rDNA heterochromatin formation ; regulation of transcription by glucose ; rRNA processing" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MFNLLKPKGASKRRKIVGRGPGSGLGKTSGRGQKGQKARNTSPRLGFEGGQTPLYRRLPRKGFSNSDYKLEYAIVNLGDIDKKFKDGQVVNYDTLLENKLIKKKNKKIKILSNGKLTKKVSFEVSKISKSAESLVIKIGCTIQLV", - "output": "large ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MDIAIHHPWIRRPFFPFHSPSRLFDQFFGEHLLESDLFSTATSLSPFYLRPPSFLRAPSWIDTGLSEMRLEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHRKYRIPADVDPLTITSSLSSDGVLTVNGPRKQVSGPERTIPITREEKPAVAAAPKK", - "output": "actin filament bundle ; axon ; cardiac myofibril ; cell surface ; contractile fiber ; cytoplasm ; cytosol ; dendritic spine ; extracellular region ; Golgi apparatus ; I band ; lysosome ; M band ; microtubule cytoskeleton ; mitochondrion ; myelin sheath ; nucleus ; perikaryon ; plasma membrane ; postsynaptic density ; protein-containing complex ; synapse ; synaptic membrane ; Z disc ; amyloid-beta binding ; cytoskeletal protein binding ; identical protein binding ; metal ion binding ; microtubule binding ; protein homodimerization activity ; protein-containing complex binding ; structural constituent of eye lens ; structural molecule activity ; unfolded protein binding ; apoptotic process involved in morphogenesis ; camera-type eye development ; cellular response to gamma radiation ; lens development in camera-type eye ; microtubule polymerization or depolymerization ; multicellular organism aging ; muscle organ development ; negative regulation of amyloid fibril formation ; negative regulation of apoptotic process ; negative regulation of cell growth ; negative regulation of cysteine-type endopeptidase activity involved in apoptotic process ; negative regulation of DNA-templated transcription ; negative regulation of gene expression ; negative regulation of intracellular transport ; negative regulation of protein-containing complex assembly ; negative regulation of reactive oxygen species metabolic process ; protein folding ; protein stabilization ; regulation of cell death ; response to estradiol ; response to hydrogen peroxide ; response to hypoxia ; stress-activated MAPK cascade ; tubulin complex assembly" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MKCIVGLGNPGAKYTNTRHNIGFLAIDALAKEHGIKLTESKFKAVFGTGMIKGERVVLVKPLTYMNLSGEAVRPLLDFYKIAVEDVLVIYDDLDLPLEKMRLRSKGSAGGHNGVKSLIQHLGTQDIKRLKLGVGRPPAPIQVIDWVLMPFAKSEQTTLQHVLSDSVNIATDFIDTPFLALMNRYN", - "output": "cytoplasm ; aminoacyl-tRNA hydrolase activity ; translation" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MALHDENVVWHSHPVTVAAREQLHGHRGVVLWFTGLSGSGKSTVAGALEEALHQRGVSTYLLDGDNVRHGLCRDLGFSDADRQENIRRVGEVASLMADAGLIVLTAFISPHRAERQLVKERVGHDRFIEIYVNTPLAICEQRDPKGLYKKARAGELRNFTGIDAIYEAPDSPQVHLNGEQLVTNLVSQLLDLLRRRDIIRS", - "output": "adenylylsulfate kinase activity ; ATP binding ; hydrogen sulfide biosynthetic process ; phosphorylation ; sulfate assimilation" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MKKGVTYPLKIDTNLSTVSSSVNYNDIECVDIKSNGHYIVKFMYREWVGPLNLMTTQKTSIKISIDLKEQTVTCTHTDKKKTVYRWGEFPNKKETEQNKKEDNPVQYETFLSSNFNSEKYVNDLFTHKTDQQATVHLQYLENRKLGCIDHLKKDVYKNHLIFIGASKEIANSEVDMLDFRNLISDYGNVMSSLQNISISWDHYKVKKSGKIDFEPLSPATEPIQWLTTAPNELSVSIEQREFEVAVGLVEKINKIYESNPKVEIVMQTHPLKDQIENKVKILTDKLMNELRSPLLKANQIKDTISLLVRLSQNDKAKSIFLESRSHSINQAIKKIVFSGDLNRFIGELARVIFNSINSTCNDFTNSFPSYMNSGLVSWIIEELVLISDIFNRQVFILDNFYSISQAIRIIESHCEMMDQTGLSIGFYWNLLLQPHVEQLIVNYEIKIRDSMLHQLMDEKWNGVSNWDYEVKSQLNSLPSSLKNSGTPNSGGSGISNNNSNNNNNYQSPIINNNFNSGGGNKKIGLTFQQMHQDNLNNMEDIDQGRLKLTSSTIFLNTIIQKFAIDICQIITIDLIPVISQSLGSIFKDYMSYLKNEIQKEYLSDTQCLAIISDSVYIVDDLVSRIATRFEDATGEKLNNLTQLSSLLYSYFESIRDQYSTRKALELVDNSMNWEEQEYQVEEELDPFPKNFIVLSEALDRLAESIQTNVNVESVLPIASRIISEIVNIISNRFESTSNLVFGYGGLQHFILEMKYLATFAGKYPVEDSTFELINTMIRNHKEIYLNNTSDPKPLKTEEYFTSIIDNLVYQKAVYN", - "output": "cell projection ; exocyst ; perinuclear region of cytoplasm ; exocytosis ; Golgi to plasma membrane transport ; protein localization ; protein transport" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MRLRTAIATLCLTAFTSATSNNSYIATDQTQNAFNDTHFCKVDRNDHVSPSCNVTFNELNAINENIRDDLSALLKSDFFKYFRLDLYKQCSFWDANDGLCLNRACSVDVVEDWDTLPEYWQPEILGSFNNDTMKEADDSDDECKFLDQLCQTSKKPVDIEDTINYCDVNDFNGKNAVLIDLTANPERFTGYGGKQAGQIWSTIYQDNCFTIGETGESLAKDAFYRLVSGFHASIGTHLSKEYLNTKTGKWEPNLDLFMARIGNFPDRVTNMYFNYAVVAKALWKIQPYLPEFSFCDLVNKEIKNKMDNVISQLDTKIFNEDLVFANDLSLTLKDEFRSRFKNVTKIMDCVQCDRCRLWGKIQTTGYATALKILFEINDADEFTKQHIVGKLTKYELIALLQTFGRLSESIESVNMFEKMYGKRLNGSENRLSSFFQNNFFNILKEAGKSIRYTIENINSTKEGKKKTNNSQSHVFDDLKMPKAEIVPRPSNGTVNKWKKAWNTEVNNVLEAFRFIYRSYLDLPRNIWELSLMKVYKFWNKFIGVADYVSEETREPISYKLDIQ", - "output": "endoplasmic reticulum ; endoplasmic reticulum membrane ; FAD binding ; protein-disulfide reductase activity ; thiol oxidase activity ; protein folding in endoplasmic reticulum" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MNCTKGGGFPLLFCAVICLMAQQGACNVVLIANNTTLSFDDVEATFTPEVKDSGVNGAIYAVEPLDACSPLRKKAANGPVSPFALVIRGGCQFDDKVRNAQNAGFKAVIVYDDEDSGVLVSMAGSSSGIYIYAVFLSKASGEVLKKYSGQSDVEVWILPVYENSAWSIMAISFTSLLAMAAVLATCFFVRRHQIRRDRGRIPVTREFHGMSSQLVKAMPSLIFTKVQEDNSTSSSCAICLEDYSFGEKLRVLPCRHKFHATCVDMWLTSWKTFCPVCKRDASAGTSKPPASESTPLLSSVIHLSAESTALSSFRSTVAVSPPRPIRRHPSSQSTSRAYSISSAPRNYNLQRYYTNSPYISTSRSNVDLANMSSQWSHTPHQASMHSLRSGHLSLPINIRYTIPHVSRSDYGSASLGLSHDSCSHHGSPSYYHSSLGQQRSYLMHRTESGPSLSTMVLQSPQ", - "output": "cytoplasm ; endomembrane system ; protein storage vacuole membrane ; metal ion binding ; ubiquitin protein ligase activity ; protein transport ; ubiquitin-dependent protein catabolic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MGSGAGELGRAERLPVLFLFLLSLFCPALCEQIRYRIPEEMPKGSVVGNLATDLGFSVQELPTRKLRVSSEKPYFTVSAESGELLVSSRLDREEICGKKPACALEFEAVAENPLNFYHVNVEIEDINDHTPKFTQNSFELQISESAQPGTRFILEVAEDADIGLNSLQKYKLSLNPSFSLIIKEKQDGSKYPELALEKTLDREQQSYHRLVLTALDGGHPPLSGTTELRIQVTDANDNPPVFNRDVYRVSLRENVPPGTTVLQVSATDQDEGINSEITYSFYRTGQIFSLNSKSGEITTQKKLDFEETKEYSMVVEGRDGGGLVAQCTVEINIQDENDNSPEVTFHSLLEMILENAVPGTLIALIKIHDQDSGENGEVNCQLQGEVPFKIISSSKNSYKLVTDGTLDREQTPEYNVTITATDRGKPPLSSSISVILHIRDVNDNAPVFHQASYLVSVPENNPPGASIAQVCASDLDLGLNGQVSYSIMASDLEPLALASYVSMSAQSGVVFAQRAFDYEQLRTFELTLQARDQGSPALSANVSLRVLVGDRNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASEPGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLVFADSLQEVLPDITDRPVPSDPQAELQFYLVVALALISVLFLLAVILAVALRLRRSSSPAAWSCFQPGLCVKSGPVVPPNYSQGTLPYSYNLCVAHTGKTEFNFLKCSEQLSSGQDILCGDSSGALFPLCNSSESTSHPELQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK", - "output": "extracellular exosome ; plasma membrane ; calcium ion binding ; cell adhesion ; homophilic cell adhesion via plasma membrane adhesion molecules ; nervous system development" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MQFIPSPAMVFDGSLNLDPLVSGKPPEETTVVVAMSGGVDSSVVAALLHERGYKVIGATMQLHSSSPASGAKSCCGSVDIYDAKRVASTLGFPHYVLDYEEVFRREVIDDFINSYKRGETPIPCVKCNQTVKFRDMLKAARAIGGDVVATGHYVRRVEIAGEQQILRGKDPQKDQSYFLFSVTSEQLKFLRFPLGDLAKSNVRLLAQQLNLEVADKPDSQDICFVPENSYREVLRNLDPASVKKGKIVHVDGRLLGEHDGISNFTVGQRRGLNISAPYPLYVVRLDAAQNTVVVGPQSALMKRALFVKNLNWLPDYNIPKRGLAVDARLRSSGATVRATITSDGDGYGTVVLEEDCVVSPGQACVLYDKERLLGGGWIYNKLCHEGA", - "output": "cytoplasm ; ATP binding ; sulfurtransferase activity ; tRNA binding ; tRNA modification" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MSNLFDSDSPTNLAEYSVSELSGSIKRTIETAFDQVRVRGEISGYRGPHSSGHAYFALKDDRARIDAVIWKGTFSRLKFRPEEGMEVIATGKVTTFPGSSKYQIVIETLEPAGAGALMALIEERKRRLGAEGLFDAARKKRLPFMPHVIGVVTSPTGAVIRDILHRISDRFPVHVLVWPVKVQGEGSGEEVANAIRGFNALEPASAISRPDVLIVARGGGSLEDLWSFNDEIVVRAAAESRIPLISAVGHETDWTLIDYAADVRAPTPTGAAEMAVPVKAELEAQAAALAARLQGCMNRQMDQRRQSVRSLMRAFPSLDQLLALPRRRFDEAAAGLGRGLELNTINKRRGFERVIAHLRPDLLSGRISERRQMLNERMVRAERMVERLIDRSASRVERAEAILASLPARLKAQTDRSRERLGNLTRHADTAIRHQLTRARAELSAQDRVLQSLSYKNVLRRGYAVIRDEDNRPVSQAAALSAGMGIAIEFADGRIGAMTTEGGTPPGGAKKRSTKPAEPTKQGSLF", - "output": "cytoplasm ; exodeoxyribonuclease VII complex ; exodeoxyribonuclease VII activity ; nucleic acid binding ; DNA catabolic process" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MARKSLIQRERKRQKLEQKYHLIRRSSKKEISKVSSLSDKWEIHGKLQSPPRNSAPTRLHRRCFSTGRPRANYRDFGLSGHILRERVHACLLPGATRSSW", - "output": "chloroplast ; ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MRPSRRAPDEMRAVSLERGVVKYAEGSCLVKFGDTHVLVTATLEDRLPPWLKGQGRGWITAEYGMLPRATLERTRREASAGKQTGRTVEIQRLIGRSLRTAIDLEALGERQITVDCDVLQADGGTRTASITGAWVALADCIRWMKARNMIKTEVLRTNVAAVSCGIYNGTPVLDLDYAEDSEAETDANFVMTGDGRIIEVQGTAEKTPFSEAEFLALMALARKGVGRLVDLQKMAVA", - "output": "3'-5'-RNA exonuclease activity ; phosphate-dependent exonuclease activity ; tRNA binding ; rRNA catabolic process ; rRNA processing ; tRNA processing" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MPFRSNNPITRDELLSRFFPQFHPVTTFNSGLSGGSFLIEHQGQRFVVRQPHDPDAPQSAFLRQYRALSQLPACIAPKPHLYLRDWMVVDYLPGAVKTYLPDTNELAGLLYYLHQQPRFGWRITLLPLLELYWQQSDPARRTVGWLRMLKRLRKAREPRPLRLSPLHMDVHAGNLVHSASGLKLIDWEYAGDGDIALELAAVWVENTEQHLQLVNDYATRAKIYPAQLWRQVRRWFPWLLMLKAGWFEYRWRQTGDQQFIRLADDTWRQLLIKQ", - "output": "ATP binding ; thiamine kinase activity ; phosphorylation ; thiamine diphosphate biosynthetic process ; thiamine metabolic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MKQTIILLYGGRSAEREVSVLSAESVMRAVNYDRFTVKTFFISQSGDFIKTQEFSQTPGQEDRLMTNETIDWDKKVAPSAIYEERAVVFPVLHGPMGEDGSVQGFLEVLKMPYVGCNILSSSLAMDKITTKRVLESAGIAQVPYVAIVEGDDVTAKIAEVEEELTYPVFTKPSNMGSSVGISKSENQEELRQALKLAFQYDSRVLVEQGVNAREIEVGLLGNYDVKSTLPGEVVKDVAFYDYDAKYIDNKITMDIPAKISDDVVAVMRQNAETAFRAIGGLGLSRCDFFYTDKGEIFLNELNTMPGFTQWSMYPLLWDNMGITYPDLIERLVELAKESFDKREAHLL", - "output": "cytoplasm ; ATP binding ; D-alanine-D-alanine ligase activity ; metal ion binding ; cell wall organization ; peptidoglycan biosynthetic process ; regulation of cell shape" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MARQINDTFLRACRGEQTSYVPVWYMRQAGRSQPEYRALKEKYSLFEITHQPELCAYVTRLPVEQYGVDAAILYKDIMTPLPAIGVNVEIQGGIGPVIANPIRSLQDVERLGEIDPEHDVPYVFETIRLLVNEQLDVPLIGFAGAPFTLASYMIEGGPSKNYHKTKAFMYAEPKAWFALMDKLAEMTIRYVRAQIRAGASAVQIFDSWVGAVSADDYRTFIKPAMARIFAALREEGAPLIMFGVGASHLVHEWNDLPLDVIGLDWRLSIREARRQGIAKAIQGNLDPAVLLAPWDVIEERVKRILDEGMERPGYIFNLGHGIFPDVQPATLKRLTAFIHEYTSTN", - "output": "cytoplasm ; uroporphyrinogen decarboxylase activity ; protoporphyrinogen IX biosynthetic process" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MTTALDQLKQYTTVVADTGDFQQLAQYQPQDATTNPSLILKAVQKDAYKPILEKTVRDHRNESTDFIIDRLLIAFGTEILKIIPGRVSTEVDARLSFDAKRSIDKAHELIKLYEAAGIERDRILIKLASTWEGIRAAETLQKEGIKCNMTLLFSLVQAAACAEAGAQLISPFVGRIYDWYKKQAGADWDEAKNGGANDPGVQSVRRIYTYYKTFGYKTEVMGASFRTTSQIVELAGCDLLTISPDLLQKLHDSNETVTRKLSPDALHDKPTERVAIDEASFRFQLNDEAMATEKLAEGIRVFAADAVKLEKLIEALR", - "output": "cytoplasm ; transaldolase activity ; carbohydrate metabolic process ; pentose-phosphate shunt" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MAFTPFPPRQPTASARLPLTLMTLDDWALATITGADSEKYMQGQVTADVSQMAEDQHLLAAHCDAKGKMWSNLRLFRDGDGFAWIERRSVREPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELPSKEKQVVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAELNNSQQWLALNIEAGFPVIDAANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGSASRLPEAGEDLELKMGENWRRTGTVLAAVKLEDGQVVVQVVMNNDMEPDSIFRVRDDANTLHIEPLPYSLEE", - "output": "cytoplasm ; folic acid binding ; RNA modification ; tRNA processing" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MAKPTSKDSGLKEKFKILLGLGTPRPNPRSAEGKQTEFIITAEILRELSMECGLNNRIRMIGQICEVAKTKKFEEHAVEALWKAVADLLQPERPLEARHAVLALLKAIVQGQGERLGVLRALFFKVIKDYPSNEDLHERLEVFKALTDNGRHITYLEEELADFVLQWMDVGLSSEFLLVLVNLVKFNSCYLDEYIARMVQMICLLCVRTASSVDIEVSLQVLDAVVCYNCLPAESLPLFIVTLCRTINVKELCEPCWKLMRNLLGTHLGHSAIYNMCHLMEDRAYMEDAPLLRGAVFFVGMALWGAHRLYSLRNSPTSVLPSFYQAMACPNEVVSYEIVLSITRLIKKYRKELQVVAWDILLNIIERLLQQLQTLDSPELRTIVHDLLTTVEELCDQNEFHGSQERYFELVERCADQRPESSLLNLISYRAQSIHPAKDGWIQNLQALMERFFRSESRGAVRIKVLDVLSFVLLINRQFYEEELINSVVISQLSHIPEDKDHQVRKLATQLLVDLAEGCHTHHFNSLLDIIEKVMARSLSPPPELEERDVAAYSASLEDVKTAVLGLLVILQTKLYTLPASHATRVYEMLVSHIQLHYKHSYTLPIASSIRLQAFDFLLLLRADSLHRLGLPNKDGVVRFSPYCVCDYMEPERGSEKKTSGPLSPPTGPPGPAPAGPAVRLGSVPYSLLFRVLLQCLKQESDWKVLKLVLGRLPESLRYKVLIFTSPCSVDQLCSALCSMLSGPKTLERLRGAPEGFSRTDLHLAVVPVLTALISYHNYLDKTKQREMVYCLEQGLIHRCASQCVVALSICSVEMPDIIIKALPVLVVKLTHISATASMAVPLLEFLSTLARLPHLYRNFAAEQYASVFAISLPYTNPSKFNQYIVCLAHHVIAMWFIRCRLPFRKDFVPFITKGLRSNVLLSFDDTPEKDSFRARSTSLNERPKSLRIARPPKQGLNNSPPVKEFKESSAAEAFRCRSISVSEHVVRSRIQTSLTSASLGSADENSVAQADDSLKNLHLELTETCLDMMARYVFSNFTAVPKRSPVGEFLLAGGRTKTWLVGNKLVTVTTSVGTGTRSLLGLDSGELQSGPESSSSPGVHVRQTKEAPAKLESQAGQQVSRGARDRVRSMSGGHGLRVGALDVPASQFLGSATSPGPRTAPAAKPEKASAGTRVPVQEKTNLAAYVPLLTQGWAEILVRRPTGNTSWLMSLENPLSPFSSDINNMPLQELSNALMAAERFKEHRDTALYKSLSVPAASTAKPPPLPRSNTVASFSSLYQSSCQGQLHRSVSWADSAVVMEEGSPGEVPVLVEPPGLEDVEAALGMDRRTDAYSRSSSVSSQEEKSLHAEELVGRGIPIERVVSSEGGRPSVDLSFQPSQPLSKSSSSPELQTLQDILGDPGDKADVGRLSPEVKARSQSGTLDGESAAWSASGEDSRGQPEGPLPSSSPRSPSGLRPRGYTISDSAPSRRGKRVERDALKSRATASNAEKVPGINPSFVFLQLYHSPFFGDESNKPILLPNESQSFERSVQLLDQIPSYDTHKIAVLYVGEGQSNSELAILSNEHGSYRYTEFLTGLGRLIELKDCQPDKVYLGGLDVCGEDGQFTYCWHDDIMQAVFHIATLMPTKDVDKHRCDKKRHLGNDFVSIVYNDSGEDFKLGTIKGQFNFVHVIVTPLDYECNLVSLQCRKDMEGLVDTSVAKIVSDRNLPFVARQMALHANMASQVHHSRSNPTDIYPSKWIARLRHIKRLRQRICEEAAYSNPSLPLVHPPSHSKAPAQTPAEPTPGYEVGQRKRLISSVEDFTEFV", - "output": "cytoplasm ; cytosol ; Golgi apparatus ; lysosome ; membrane ; nucleus ; perinuclear region of cytoplasm ; postsynaptic density ; TSC1-TSC2 complex ; GTPase activator activity ; Hsp90 protein binding ; phosphatase binding ; protein homodimerization activity ; small GTPase binding ; anoikis ; endocytosis ; heart development ; insulin-like growth factor receptor signaling pathway ; negative regulation of cell population proliferation ; negative regulation of insulin receptor signaling pathway ; negative regulation of mitophagy ; negative regulation of phosphatidylinositol 3-kinase signaling ; negative regulation of protein kinase activity ; negative regulation of protein kinase B signaling ; negative regulation of TOR signaling ; negative regulation of Wnt signaling pathway ; neural tube closure ; positive chemotaxis ; positive regulation of GTPase activity ; positive regulation of macroautophagy ; protein import into nucleus ; protein kinase B signaling ; protein localization ; regulation of cell cycle ; regulation of endocytosis ; regulation of insulin receptor signaling pathway ; regulation of small GTPase mediated signal transduction ; vesicle-mediated transport" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MKHFIGNDWDHVLAPVFESGEYHKLHVFLKKEYQTKQIYPDMYHIFTAFKLTPFKDTKVVILGQDPYHNPSQANGMSFSVMPGTPLPPSLRNIYKELYDDVGAQPVNHGYLKRWADQGVLLLNAVLTVPYGQANGHQGKGWEMVTDAAIKALSERGQVVFILWGRFAQNKIPLIDQDKNVIIKSAHPSPFSANRGFFGSRPFSRCNAALKEFGRAPVDWQLPPNTEA", - "output": "cytoplasm ; uracil DNA N-glycosylase activity ; base-excision repair" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MILTRIILHNYRNIEAAELCPEENFNLLCGDNAQGKTNTLEAIYLLGHFKSFRRGRNEELIGSADRHTRVQGEFLRDGLRETVSITITGDKKNIEINGKRPRQSNEMFGRFPSVLFAPEEVSLPKGFPAGRRALLDRALCQTRPSFLDHARAYQRCLRQRNILLKSGAAAPIVLPWTEELIQTGAMVRLARRRYLDRLLPLLRDIYREICSGRESVNLVYPSESDNLSDLKEELRSNLEREQSRETKYGMTMVGPHRDDPVFMVDDRVLGLYGSQGQQRSFILAFKTAQIIDLEKETGYTPLLLLDDMTSELDRKRQDYFFRFLHQRQGQVFITCTELSPLQNAGFNRMRTFRVREGKLCDYQ", - "output": "cytoplasm ; ATP binding ; single-stranded DNA binding ; DNA repair ; DNA replication ; SOS response" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MSKIYDWFEERLEIQSIADDISSKYVPPHVNIFYCFGGITFTCFLVQVATGFAMTFYYRPTVAEAFTSVQYLMTQVNFGWLIRSIHRWSASMMVLMMILHIFRVYLTGGFKKPRELTWVTGVLMAVCTVSFGVTGYSLPWDQIGYWAVKIVTGVPDAIPVIGQVLLELLRGGVAVGQSTLTRFYSLHTFVLPLFTAVFMLMHFLMIRKQGISGPL", - "output": "chloroplast thylakoid membrane ; electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity ; metal ion binding ; photosynthesis ; respiratory electron transport chain" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MSWQAYVDEHLMCDVGDGQGHHLTAAAIIGHDGSVWAQSANFPQFKPQEITDIMKDFDEPGHLAPTGMFLAGLKYMVIQGEPNAVIRGKKGAGGITIKKTGQSMVFGLYEEPVTPGQCNMVVERLGDYLIEQGL", - "output": "cell cortex ; cytoplasm ; cytoskeleton ; mitochondrion ; nucleus ; phragmoplast ; actin monomer binding ; actin cytoskeleton organization ; sequestering of actin monomers" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MSTMTPAEIVSELDKHIIGQDKAKKAVAVALRNRWRRQQVAEPLRQEITPKNILMIGPTGVGKTEIARRLAKLADAPFIKIEATKFTEVGYVGRDVDSIVRDLIEISVKQTRETEMRKVRSKATDLAEDRILDVLLPQPRAVGFGASVEHANDDNNATRQTFRKRLREGQLDDKEIELDIEQPTVGMDIMAPPGMEEMTEQIRSMFSNLGSGKKQRRKVKIKEALKLLTDEEAAKMLNDEEVKTKAVQNVEQNGIVFLDEIDKITSRNHEGGGGEVSRQGVQRDLLPLVEGTTINTKYGMVKTDHILFIASGAFHLAKPSDLIPELQGRFPIRVELDSLSVKDFEAILVATDASLVKQYQALLATEDVALEFADDGIRRLAEIAYAVNEKTENIGARRLYTVIEKLLEEVSFAAGNHAGQSVTIDAAYVDRALGEVSKDEDLSRYVL", - "output": "HslUV protease complex ; ATP binding ; ATP hydrolysis activity ; peptidase activity ; proteasome-activating activity ; protein unfolding" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MTNIRKTHPLIKIINHSFIDLPAPSNISAWWNFGSLLGICLVIQIITGLFLAMHYTSDTMTAFSSVTHICRDVNYGWLIRYMHANGASMFFICLFLHVGRGLYYGSYTYFETWNIGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVMVHLLFLHETGSNNPSGLISDSDKIPFHPYYTIKDILGVLLLILILMMLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILMLFPILHMSKQRSMMFRPLSQCVFWILVADLFTLTWIGGQPVEYPFIIIGQLASILYFMIILLILPAISLFENTLLKW", - "output": "mitochondrial inner membrane ; respiratory chain complex III ; metal ion binding ; ubiquinol-cytochrome-c reductase activity ; respiratory electron transport chain" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MKSVASPLCQFHGVFCLYQCRQCLAYHVCDGGAECVLLHTPESVICELTGNCMLGNIQEGQFLGPVPYRTLDNQVDRDAYHGMLACLKRDIVRYLQTWPDTTVIVQEIALGDGVTDTISAIIDETFGECLPVLGEAQGGYALVCSMYLHVIVSIYSTKTVYNSMLFKCTKNKKYDCIAKRVRTKWMRMLSTKDT", - "output": "host cell cytoplasm ; host cell nucleus" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MDGVSNWPAPSTPTPVHATLTIPGSKSQTNRALVLAALATPQGTSTISGALRSRDTDLMIGALQTLGFDVESAGTDSDLRVGGGLGPAAGARVDCGLAGTVLRFLPPVAALSTETVEFDGDEQARARPIAPLLAGLQALGVRIDGDGLPFRVRGEGSVAGGTVEIDASASSQFVSGLMLSGALFRDGLTIVHTGESVPSAPHVAMTVSMLRDAGVEVDDTKTNRWTVRPGPVAARHWTIEPDLSNAVPFLSAGVVSGGAVRITGWPAVSTQPAGAIMAILEKVGAVVRQTESYLEVQGTRQYQGFDVDLHDVGELTPAVAALAAVATPGAVSRLRGVAHLRGHETDRLAALSAEINGLGGQCEETDDGLVITAAPLHGGVWHSYADHRMAMAGAIVGLRTPGVEIEDIATTAKTLPEFPQMWADMLAGQTATDPEAGA", - "output": "cytoplasm ; 3-phosphoshikimate 1-carboxyvinyltransferase activity ; amino acid biosynthetic process ; aromatic amino acid family biosynthetic process ; chorismate biosynthetic process" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MKNEKLPQFQPHFLAPKYWLFWLGVAIWRSILCLPYPILRHIGHGFGWLFSHLKVGERRAAIARRNLELCFPDMPENEREVILQENLRSVGMAIIETGMAWFWSDSRIKKWSKVEGLHYLKENQKDGIVLVGVHFLTLELGARIIGLHHPGIGVYRPNDNPLLDWLQTQGRLRSNKDMLDRKDLRGMIKALRHEETIWYAPDHDYGRKNAVFVPFFAVPDTCTTTGSYYLLKSSQNSKVIPFAPLRNKDGSGYTVSISAPVDFTDLQDETAIAARMNQIVEKEIMKDITIYMWLHRRFKTRPDEKTPSLYD", - "output": "plasma membrane ; acyltransferase activity ; Kdo2-lipid A biosynthetic process ; lipid A biosynthetic process ; lipopolysaccharide biosynthetic process" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MELSPRAAELTNLFESRIRNFYANFQVDEIGRVVSVGDGIAQVYGLNEIQAGEMVLFANGVKGMALNLENENVGIVVFGGDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDAMGVPIDGRGALSDHEQRRVEVKAPGILERKSVHEPMQTGLKAVDSLVPIGRGQRELLIGDRQTGKTTIAIDTILNQKQINSRATSESETMYCVYVAIGQKRSTVGQLIQTLEEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSSKLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEVPKQPQYAPLPIEKQILVIYAAVNGFCDRMPLDRISQYEKAIPNSVKPELLQALKGGLTNERKMEPDAFLKERALALI", - "output": "mitochondrial inner membrane ; proton-transporting ATP synthase complex, catalytic core F(1) ; ATP binding ; proton-transporting ATP synthase activity, rotational mechanism" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MKVISSIQELRDQLRGQNRTAFVPTMGNLHEGHLSLMRLARQHGDPVVASIFVNRLQFGPNEDFDKYPRTLQDDIEKLQKENVYVLFAPTERDMYPEPQEYRVLPPDDLGGILEGEFRPGFFAGVCTVVTKLMSCVQPRVAVFGKKDYQQLMIVRRMCQQLALPVDIIAAETVRDEDGLALSSRNRYLTTDERKEAPELAKTLQRVRDGVLGGERDLGKLEQTARAHLAERGWAPDYISIRRRANLIAPSAAELEAGEPLVVLAAAKLGATRLIDNLEI", - "output": "cytoplasm ; ATP binding ; pantoate-beta-alanine ligase activity ; pantothenate biosynthetic process" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MSVPSRKIRLIMELRQNGVSATPVLAAIERVPRDAFVSAPFSDQAYENTALPIGCGQTISQPLVVGLMTQALDLNDRHKVLEIGTGSGYQTAVLARLCRRVYTIERHGALLREAEARLTALGLHRTVVTREGDGGRGWPEQAPFERILVTAAALDIPKVLVAQLAIGGVMVLPVGKESGAQEVVRVRRTAEDALVTERLFPVRFVPLVDGLPPRDAPGA", - "output": "cytoplasm ; protein-L-isoaspartate (D-aspartate) O-methyltransferase activity ; methylation ; protein modification process ; protein repair" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MSPSQLIGFLLLWVPASRGEIVLTQSPDFQSVTPKEKVTITCRASQSIGSSLHWYQQKPDQSPKLLIKYASQSISGVPSRFSGSGSGTDFTLTINSLEAEDAAAYYCHQSSSLP", - "output": "extracellular space ; immunoglobulin complex ; plasma membrane ; adaptive immune response ; immune response" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MAKTKTGIFSGSFNPIHIGHLALANYLCEFEGLDEVWFMVTPHNPFKNQADLWPDELRLQLVQLAIEGYPRFRVSDFEFHLPRPSYTIHTLNRLKQEYPEREFQLIIGSDNWMVFDRWFESERIVSENKILVYPRPGFSVDKSQLPPNVHVADSPIFEISSTFIREALATGKDIRYFLHPAVYKRIIQQTDSIDSSHSCHT", - "output": "ATP binding ; nicotinate-nucleotide adenylyltransferase activity ; NAD biosynthetic process" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MAPGSRGERSSFRSRRGPGVPSPQPDVTMLSRLLKEHQAKQNERKELQEKRRREAITAATCLTEALVDHLNVGVAQAYMNQRKLDHEVKTLQVQAAQFAKQTGQWIGMVENFNQALKEIGDVENWARSIELDMRTIATALEYVYKGQLQSAPS", - "output": "axon cytoplasm ; BLOC-1 complex ; BORC complex ; cytoplasmic side of lysosomal membrane ; cytosol ; early endosome ; extracellular space ; lysosomal membrane ; mitochondrial intermembrane space ; mitochondrial matrix ; aerobic respiration ; anterograde axonal transport ; anterograde synaptic vesicle transport ; endosomal transport ; lysosome localization ; melanosome organization ; neuron projection development ; organelle transport along microtubule ; peptidyl-lysine acetylation ; platelet dense granule organization ; regulation of endosome size ; regulation of lysosome size" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MTVTGIIAEFNPFHNGHKYLLDHAEGIKIVAMSGNFVQRGEPAIVDKWIRAQMALENGADLVVELPFFTAVQSADYFASGAVDILSRLGIDSLTFGTEEVLDYQTIADVYSEKSEEMEAFVESLPSDLSYPQKTQKMWEKFAGVDFTGNTPNHILGLAYAKACAGKGITLNPIQRQGAGYHSLDKEVSFASATSLRLHKEDSNFVDKFMPNSKLFQTSPQVSWDNYFQLLVYQILTNPDLTSVFQVNEEIASRLKAAVREISSVEELVDKVATKRYTKARVRRILTYILVGAVDNSLPKSIHVLGFSQKGQFHLKSVKKSVDIVARIGRKPWDMLTQQADNVYQLGNPELCEQNFGRVPIRVK", - "output": "cytoplasm ; ATP binding ; ligase activity, forming carbon-nitrogen bonds ; tRNA binding ; tRNA modification" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MDVLEVAARATGTGPVCDACLGRLVADRSFGLSNAERGSALRTSLALRDDEDYEPVETADCWVCEGRCTEFDEWAERAAEAVEDVEFATYNVGTRPPPLIEENEALLREEAGLDDDAGEPFKSEFNREVGKRFGRLTETEVSFDRPDVQFTIDLAEDEIDAKVNSTFVYGRYRKLERDIPQTEWPCRECKGSGRQGADPCDHCGGSGYLYDDSVEEYTAPVVEDVMDGTEATFHGAGREDVDALMLGTGRPFVIEVEEPRRRRVDTDRLQADINAFADGAVEVEGLRLATYDMVERVKEHDAAKRYRAEVAFDADVDADALAAAVEELEGTTVEQYTPNRVDHRRASITRERDVYEATAELDDARHAIVEIHGEGGLYIKELISGDEGRTEPSLAGLLGVGAEVTALDVVAVEGEDEPFEREEFFRE", - "output": "tRNA binding ; tRNA pseudouridine synthase activity ; tRNA pseudouridine synthesis" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MGSTAGDVAAVVDEEACMYAMQLASSSILPMTLKNAIELGLLEVLQKEAGGGKAALAPEEVVARMPAAPGDPAAAAAMVDRMLRLLASYDVVRCQMEDRDGRYERRYSAAPVCKWLTPNEDGVSMAALALMNQDKVLMESWYYLKDAVLDGGIPFNKAYGMTAFEYHGTDSRFNRVFNEGMKNHSVIITKKLLDFYTGFEGVSTLVDVGGGVGATLHAITSRHPHISGVNFDLPHVISEAPPFPGVRHVGGDMFASVPAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHVDMIMLAHNPGGKERYEREFRELAKGAGFSGFKATYIYANAWAIEFIK", - "output": "acetylserotonin O-methyltransferase activity ; caffeate O-methyltransferase activity ; luteolin O-methyltransferase activity ; O-methyltransferase activity ; protein dimerization activity ; S-adenosylmethionine-dependent methyltransferase activity ; tricetin O-methytransferase activity ; aromatic compound biosynthetic process ; flavonol biosynthetic process ; lignin biosynthetic process ; melatonin biosynthetic process ; methylation ; regulation of lignin biosynthetic process ; response to wounding" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MKHYVAVDIGASSGRLILGKLVNEKLQLEEIHRFKNGFTYRDGHERWEIDQLMQEIFIGLEKVKQLGISECVLGIDTWGVDYVLIGASGEKLADPISYRDKRTLNAVQNLTSEYPREYIYKKTGIQFMELNTLYQLYVEERDLLERAEKILLIPDYIGYVLTGVKVAETTNSSTTQMLNLREQLFDKDLLSHLNIDVEKFAPLTDAGTYLGEVKEDWLKMYDIPNCDVVTVATHDTASAVVGTPAEGENWAFLSSGTWSLIGMELSAPINNEVAFKENYTNEWGAYGTYRFLKNIMGLWIVQEIARMDDYKHSFAEMAEEAGNYPYFKQIINVNDARFNNPENMVDEIRLYCRETGQTVPETIGELTNCVYGSLALYYALELEKMTEITGKKIEKLYIVGGGSNVAMLNQLTAKLAGIEVFAGPSEATAIGNLVVQMINQGEIESMRAGRKIIRNSFEIGEFSCGDVRFEEIKERFTKVLEFN", - "output": "cytosol ; ATP binding ; glycerol kinase activity ; rhamnulokinase activity ; glycerol metabolic process ; phosphorylation ; rhamnose catabolic process" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MKVLSKLKPAPGLWLHKAPTPKPGRDEVLIKIKKTAICGTDLHIYKWDEWAQKTIPVPMHVGHEFVGEIVEVGEAASALAVGDRVSGEGHITCGDCRNCRAGKRHLCRYTVGVGVNRPGAFAEYLVIPAKNAYKIPAKISDDIAAILDPFGNAAHSALEFDLVGEDVLITGAGPVGLMSAAIARHVGARHVVITDVNDYRLALAEKVGVTAAVNSTKTPLTETMKNLGMTEGFDVGLEMSGNAEAFRSMLTVMNNGGKIAFLGIPPEPFAIDWNQVVFKSLLIKGIYGRRMFETWYKMTNLLLSGLDISPIITHEFPMKDFQQAFDVMLSGKTGKVILNWEQ", - "output": "cytoplasm ; L-threonine 3-dehydrogenase activity ; zinc ion binding ; L-threonine catabolic process to glycine" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MNEQFIQFPQIDPIIFSIGPIALRWYGLMYLIGFGFAYWLGMRRAKNSNGVWTTEQVDQLIYTCFWGVILGGRIGDVFFYNFDRLLQDPMFLFRIWEGGMSFHGGLIGVIVAMIWVSFRQKRSFWNTADFIAPLIPFGLGMGRIGNFINDELWGRITDVPWAVLFPSGGYLPRHPSQLYEFFLEGVVLFFILNWFIKKPRPAGSVAGLFLIGYGVFRFLVEYVRDIDPNVNTVDDLITRGQLLSLPMIIGGLAIMIWAYSRKKA", - "output": "plasma membrane ; phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity ; lipoprotein biosynthetic process" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MVNVPEQQSPETAAVCKNEKLLNKLESSSYNKSNMDQLAVIVNFLERKNINYILNVVPVMQDERKMSKRKKKVINNNKYILFNSWYTKIKQPEWPSSPAMWDLVKNKPELADFVFIFDHTEKLGKKMADRSTSSSSSENAAIPASKKRQTVVLTNANLAELKESCEMRDKLYSEFYSLLNETFNHNVAPLLSNIYDEVLTRDFITKSMAKFKTVALKLPVAPSTTEYVPTPISGSRKRKSSVPAKQRSSIKTRRNTVAPALLMVSDNTQDTNMSD", - "output": "host cell nucleus ; virogenic stroma ; DNA binding" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MNEEQRLANQQVNQPKKEDKPEKDYSKYFEKVFTAPSLKDAKKRGKEDVKYHKDFSIDEQFAGMGKDRTFYIRTYGCQMNEHDTEVMAGIFMQLGYTPTEIIEEADVVLLNTCAIRENAENKVFGELGFLLKYKRKNPEMLIGVCGCMSQEESVVNKILRSYPHVDMVFGTHNIHRLPNILKEAYMSKEMVVEVWSKEGDVIENLPKKRLGSIKAWVNIMYGCDKFCTYCIVPYTRGKERSRRPEEIIAEVRELAAAGYQEIMLLGQNVNAYGKDFEDIEYRLGDLMDALRKIDIPRIRFTTSHPRDFDDHLIEVLAKRGNLVEHIHLPVQSGSNDILKIMARKYTREHFLTLVEKIKAAIPEVTLTTDIIVGYPNETEEQFEETLSLYREVGFEAAFTYIYSPREGTPAAKMVDNVPEEVKKERLQRLNEVVGEYSRKALERLNGEVVEVLVEGTSKRRDDVLAGYTRKNRLVNFKGPAEVIGQLVKVKIIETTSYSLTGEFLEVVKNEKVEA", - "output": "cytoplasm ; 4 iron, 4 sulfur cluster binding ; metal ion binding ; methylthiotransferase activity ; tRNA modification" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MHALSQEPTVWHGTTILTVRKGGRVVVGGDGQVSIGQTVIKSNARKVRKLGKGDVIGGFAGATADAFTLFERLESKLEQYPGQLTRAAVELAKDWRTDRYLRRLEAMMIVADKEVSLVLTGTGDVLEPEAGVMAIGSGGNYALAAARALIDTDKDAESIVRKSLDIAADICVYTNRNITIEALSAE", - "output": "HslUV protease complex ; proteasome core complex ; metal ion binding ; threonine-type endopeptidase activity ; proteolysis involved in protein catabolic process" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MATILKQKLKTFFVPTAITLLLSACNSTSLFENSVTYLIKQEAYASSEFYINKAEQTLNSQDKITYQLLAVRKLIDENKVVEAQNTLNDLTTRLNIMEQNPLQQLEYQLVTAQLAALKGNNHQAEVTLQHISAANLSHSQLLRFYQTQAKIAENSKNTIEAVRIRSLIATQLVDNKLRQENNDKIWSLLRNANRGMLSSAQAGAGEMELAGWLALIEIYNQSVSTPAQMPQNINYWKRLYPNHSALAVMPTELQRVFNFQQTLLNNVALLLPLSGDAKILGEIIKKGFDDAKEQDPTIVQVFDTDSNSIENILMQAKQQGAQMIIGPLLKSRVNQMLASDQIRDINVLALNATQDVKPIVGVCYYGLSPEAEARSGADRLSRDGYTKAIVVAARDEFGQRSAEAFAQRWRQLTNTDADIRYYNQPLDVITTIQNSANNLQETALYALGNAEQLLEIKQGLENSTIAGQLAIYTASRSNSPNNGIEFRTAMEGVKFSEIPLLADHNSNEYQKAYSLADSDFSMMRLYAMGSDTWALANKFNEFRQIPGYSISGLTGNLNAGPNCNIERNMTWLQYHNGAVETTN", - "output": "periplasmic side of cell outer membrane ; enzyme regulator activity ; peptidoglycan biosynthetic process ; regulation of cell shape" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MRNSTKQEDLVKAFKALLKEEKFSSQSEIVHALQDEGFENINQSKVSRMLTKFGAVRTRNAKMEMVYCLPAELGVPTTSSPLKNLVLDVDYNDAVVVIHTSPGAAQLIARLLDSLGKSEGILGTIAGDDTIFTTPARGFSVKQLYEAILVLFEQEL", - "output": "cytoplasm ; arginine binding ; DNA binding ; DNA-binding transcription factor activity ; arginine biosynthetic process ; protein complex oligomerization" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MSFDAKAFLATLTELPGVYRMLDIGGNVLYVGKAKNLKKRVASYFRENLSSPRIAHMVSQIASIETTATRTEAEALLLENNLIKSLAPRYNILFRDDKSYPYIVLSKGKFPRLGFFRGNPDRKADYFGPYPSSWAVRDSIHLMQKMFRLRTCEDTVFSNRSRPCLLYQIKRCSGPCVGFISADDYAADIQLAAMFLLGKQQEVTRRLTKSMEEASAKLAFEQAAVFRDQIQSLHQVQEKQFVSSSKGEDVDVLVAIKEAGQLCVNLAMVRGGRHLGDRPFFPTNAADSEPSDACAAFIRQHYAAHPAPARILSYPLPSEDEAGETEVALAELAGRPVPVQEGRGATHKAWVEMAIQNARLAILAKNQATAQQEQRLAALQDALQLPEPIARIECFDISHTMGEATVASCVVYEGNRMKKSDYRRFNIRDIQAGDDYAAMRQAVSRRYDSIAGGEGTAPDLILIDGGKGQVSSAFSALADLGLTHLPMIGVAKGEERKPGLETLIFPEGREPLQLPPQHPALHLIQEIRDEAHRFAITGHRAQRGKARKTSKLESLPGIGPARRKALVARFGGLPGVLAASIDQLAEVPGVSREMAEKIHSALH", - "output": "cytoplasm ; excinuclease repair complex ; DNA binding ; excinuclease ABC activity ; nucleotide-excision repair ; SOS response" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MAAKIRRNDEVIVLAGKDKGKKGKVTKVLATGKVIVEGINLVKKHQKPVPALGIQGGIVEQEAAIDVSNVAIFNAATGKADRIGFRFEDGKKVRFFKSNGETVSN", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MTITPQEALQRTIEHREIFHDEMLHLMRLIMRGDMSPVMAAAIITGLRVKKETIGEIAAAATVMREFARRVEVEDNANFVDIVGTGGDGSHTFNISTATMFVAAAAGAKVAKHGNRGVSSKSGSADVLEALGVNIDLQPEQVAASIAETGMGFMFAPNHHPAMRNIAPVRRELGVRTIFNILGPLTNPADAPNQLMGVFHPDLVGIQVRVMQRLGAQHVLVVYGKDGMDEVSLGAATLVGELRDGEVREYEIHPEDFGMQMVSNRTLKVESADESRVMLLEALGNKPGVAREIVTLNAGTALYSADVAGSIADGIQLARDAIASGRAREKVDELVRFTQQFKR", - "output": "anthranilate phosphoribosyltransferase activity ; magnesium ion binding ; tryptophan biosynthetic process" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MAIARLIVENFRNISAVDLEFDHGFNFLVGNNGSGKTSLLEALFYLGHGRSFKSSVTTRVIRYDQPHFTLHGRIRELQHEWSVGLQKQRKDGNTIVKINGEDGNKISDLAHLLPMQIITPEGLTLLNGGPSYRRAFLDWGLFHHQPNFHSAWSALHRLLKQRNAALNQTYDYNMLKPWDMELAKLAHQVSQWRADYAEALSPEIEQTCRLFLPELDIHVSFHQGWEKDTDYAQLLTENFERDKAIGYTVSGPQKADFRFKSNGLPVEDVLSRGQLKLLMCALRLAQGEHLMAQKNRHCIFLIDDFASELDETKRALLAQRLQNSNSQVFVTAISPEQLKQMQPEKHRTFQVVNGQIEQLL", - "output": "cytoplasm ; ATP binding ; single-stranded DNA binding ; DNA repair ; DNA replication ; SOS response" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MIYETAPAKINFTLDTLFKRNDGYHEIEMIMTTVDLNDRLTFHKRKDRKIVVEIEHNYVPSNHKNLAYRAAQLFIEQYQLKQGVTISIDKEIPVSAGLAGGSADAAATLRGLNRLFDIGASLEELALLGSKIGTDIPFCIYNKTALCTGRGEKIEFLNKPPSAWVILAKPNLGISSPDIFKLINLDKRYDVHTKMCYEALENRDYQQLCQSLSNRLEPISVSKHPQIDKLKNNMLKSGADGALMSGSGPTVYGLARKESQAKNIYNAVNGCCNEVYLVRLLG", - "output": "4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity ; ATP binding ; phosphorylation ; terpenoid biosynthetic process" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MIYAEILAGGKGTRMGNVNMPKQYLPLKGKPIIVHTIEKFILNDRFEKIIIATPKDWINHTQDIIKKYIFDSRVIVIEGGTDRNETIMNGIRYVEKEFGLNEDDIIVTHDAVRPFITHRIIEENIDMALEFGSVDTVIPAVDTIVESTNHDFITDIPVRGNIYQGQTPQSFNMKTIQKHYNNLTDDEKQILTDACKICLLAGEKVKLVNGGISNIKITTPYDLKVANAIVQERINS", - "output": "2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity ; D-ribitol-5-phosphate cytidylyltransferase activity ; cell wall organization ; isoprenoid biosynthetic process ; poly(ribitol phosphate) teichoic acid biosynthetic process" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "GSSGMIPFPRV", - "output": "extracellular region ; neuropeptide signaling pathway" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MKMEDMSLSGLDNTKLEALAHDVYSDLVEDACLGLCFEVHRAVKQGYFFLDETDQESMKDFEIVDQPGVDIFGQVYNQWKNKECVCPNCSRSIAASRFAPHLEKCLGMGRNSSRIANRRIASSNNTSKSESDQEDNDDINDNDWSYGSEKKAKKRKSEKNPNSPRRSKSLKHKNGELSGSVNPDMYKYNYSSGISYETLGPEELRSILTTQCGVVSEHTKKMCTRSQRCPQHTDEQRRAVRVFLLGPSASTLPDADTMLENEAYEPPDGQLIMSRLHWDASSDISPSDSASSKASTNNSESKRPKKKKPSTLSLTPAGERDKAQERDRIAGSGSSGSSSQNALGLSSRKKRPKLAVPPAPSIYDDLN", - "output": "DUBm complex ; SAGA complex ; transcription coactivator activity ; zinc ion binding ; chromatin organization ; histone deubiquitination ; positive regulation of DNA-templated transcription ; regulation of transcription by RNA polymerase II" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MFNHVTVLLKETVDGLDIKPDGTYVDCTLGGGGHSSYLLSQLTEGGRLIAFDQDEIAIQNAKEKFSSYGEQFITVKSNFRYLSEKLQELGITEVDGILFDLGVSSPQLDTPERGFSYHHDAPLDMRMDQDAPLTAYDVVNSWSYEQLVRIFFQYGEEKFSKQIARKIEAYRENKAIETTGELVELIKEGIPAPARRTGGHPAKRVFQAIRIAVNDELKVFEEALESAIEMVKPGGRVSVITFHSLEDRICKTTFKRNSTTPQLPPGLPIIPDEFKPKLKLITRKPILPSDIELEENNRARSAKLRIAEKR", - "output": "cytoplasm ; rRNA (cytosine-N4-)-methyltransferase activity ; rRNA base methylation" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MDIAALREEYTRHGLSRDDLNVDPFKQFETWFKQACESQLLEPNAMSLATASDQGEPSLRTVLLKYFDNQGFVFFTNYESNKAKQIEENPYVALLFLWLPLERQVKIRGKAAKISTAESFRYFTTRPRGSQLGAWCSEQSSVISSRQLLEMKFEEIRRKFAQGEIPLPSFWGGYRIVPHYFEFWQGRPNRLHDRFSYTLQEDNTWEIHRLSP", - "output": "FMN binding ; pyridoxamine-phosphate oxidase activity ; pyridoxine biosynthetic process" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MAGTDREKALDAALAQIERQFGKGAVMRMGDRTNEPIEVIPTGSTALDVALGVGGIPRGRVVEVYGPESSGKTTLTLHAVANAQKAGGQVAFVDAEHALDPEYAKKLGVDIDNLILSQPDNGEQALEIVDMLVRSGALDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITSALNQSKTTAIFINQLREKIGVMFGSPETTTGGRALKFYASVRLDIRRIETLKDGTDAVGNRTRVKVVKNKVAPPFKQAEFDILYGQGISREGGLIDMGVENGFVRKAGAWYTYEGDQLGQGKENARNFLKDNPDLANEIEKKIKQKLGVGVHPEESATEPGADAASAAPADAAPAVPAPTTAKATKSKATAAKS", - "output": "cytoplasm ; ATP binding ; ATP-dependent DNA damage sensor activity ; damaged DNA binding ; single-stranded DNA binding ; DNA recombination ; DNA repair ; SOS response" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MSWRSEYIWVEFIAGSRKPGNFFWAFILFLGSLGFLVVGISSYLDRNLLSLFPSQQINFFPQGIVMSFYGIAGLFISSYLWCTIIWNVGSGYDRFDTKEGIVCIFRWGFPGKNRRIFLRFLMKDIQSIRIEVKEGIYARRVLYIESRGLGAIPLNRTDENLTPREIEQKAAELAYFLRVPIEGF", - "output": "chloroplast thylakoid membrane ; photosystem I ; photosynthesis" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MAAWKSWAALRLCATVVLLDMVVCKGFVEDLDESFKENRNDDIWLVDFYAPWCGHCKKLEPIWNEVGLEMKSIGSPVKVGKMDATSYSSIASEFGVRGYPTIKLLKGDLAYNHRGPRTKDDIIEFAHRVSGALIRPLPSQQMFEHMQKRHRVFFVYIGGESPLKEKYIDAASELIVYTYFFSASEEVVPEYVTLKEMPAVLVFKDETYFVYDEYEDGDLSSWINRERFQNYLAMDGFLLYELGDTGKLVALAVIDEKNTSVEHTRLKSIIQEVARDYRDLFHRDFQFGHMDGNDYINTLLMDELTVPTVVVLNTSNQQYFLLDRQIKNVEDMVQFINNILDGTVEAQGGDSILQRLKRIVFDAKSTIVSIFKSSPLMGCFLFGLPLGVISIMCYGIYTADTDGGYIEERYEVSKSENENQEQIEESKEQQEPSSGGSVVPTVQEPKDVLEKKKD", - "output": "endoplasmic reticulum membrane ; protein disulfide isomerase activity" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MNKPFLILLIALIVFSGCNMRKYFKPAKHQIKGEAYFPNHLQESIVSSNRYGAILKNGAVIGDKGLTQLRIGKNFNYESSFLNESQGFFILAQDCLNKIDKKTNKSKVAKTEETELKLKGVEAEVQDKVCHQVELISNNPNASQQSIVIPLETFALSASVKGNLLAVVLADNSANLYDITSQKLLFSEKGSPSTTINSLMAMPIFMDTVVVFPMLDGRLLVVDYVHGNPTPIRNIVISSDKFFNNITYLIVDGNNMIASTGKRILSVVSGQEFNYDGDIVDLLYDKGTLYVLTLDGQILQMDKSLRELNSVKLPSSLNTIVLNHNKLYSLEKRGYVIEVDLNDFDSYNVYKTPTIGSFKFFSSNRLDKGVFYDKNRVYYDRYYLDYNDFKPKLYPVVEKSASKKSQKGEKGNAPIYLQERHKAKENKQPLEENKVKPRNSGFEEEEVKTRRPEPIRDQNNATQQGETKNNESKNAPVLKENAAKKEVPKPNSKEEKRRLKEEKKKAKAEQRAREFEQRAREHQERDEKELEERRKALEMNKK", - "output": "cell surface" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MSLPAGNAVGNWLLILTAIFGFLTLIWIPQASAECQTRSIYCYECDSWTDARCKDPFNYTALPRDQPPLMTCNGCCVKMVRHQRSRYEVVRRMCTSQLQINLFMVDHVCMMESSGNGHMCFCEEDMCNSSKNLYTKNGYQHLINIMIIWLIGILLNQLSNR", - "output": "external side of plasma membrane ; plasma membrane ; GPI anchor binding ; negative regulation of acetylcholine-gated cation channel activity ; negative regulation of membrane potential ; positive regulation of circadian sleep/wake cycle, sleep ; positive regulation of voltage-gated potassium channel activity ; regulation of circadian sleep/wake cycle, sleep ; regulation of synaptic transmission, cholinergic ; rhythmic process ; sleep" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MTGKALLKPHWLRVKAPQQQRIGEVAELLKGLNLKTVCQEASCPNIGECFAGGTATFLIMGPGCTRACPYCDIDFDKSPRSLDPTEPERLSEAVAQMNLRHVVITSVNRDDLSDGGASQFVACIEAIRQRSPLTTIELLIPDFNGNWDALAKVMGAAPEVLNHNIETVPRLYKRARPQADYMRSLELLYQVRQGWPKVYSKSGLMVGLGETDAEVIEVLEDLRRHRVDIVTIGQYLSPSPKHLPVDRFVTPEQFEYFRSMGETELGFLQVVSTPLTRSSYHAGEVQRLMAAHPR", - "output": "cytoplasm ; 4 iron, 4 sulfur cluster binding ; lipoate synthase activity ; metal ion binding ; protein lipoylation" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MFALTAYRLRCAAWLLATGIFLLLAGCSEAKAPTALERVQKEGVLRVVTRNSPATYFQDRNGETGFEYELAKRFAERLGVELKIETADNLDDLYAQLSRAGGPALAAAGLTPGRQDDASVRYSHTYLDVTPQVIYRNGQQRPTRPEDLVGKRIMVLKGSSHAAQLAELKKQYPELKYDESDAVEVVDLLRMVDVGDIDLTLVDSNELAMNQVYFPNVRVAFDFGEARGLAWALPGGDDDSLMNEVNAFLDQAKKEGLLQRLKDRYYGHVDVLGYVGAYTFAQHLQQRLPRYESHFKQSGKQLDTDWRLLAAIGYQESLWQPSATSKTGVRGLMMLTNRTAQAMGVSNRLDPKQSIQGGSKYFVQIRSELPESIREPDRSWFALAAYNIGGAHLEDARKMAEKEGLNPNKWLDVKKMLPRLAQKRWYAKTRYGYARGGETVHFVQNVRRYYDILTWVTQPQMEGSQIAESGLHLPGVNKTRPDDDEGDGKL", - "output": "cell outer membrane ; lytic transglycosylase activity ; cell wall macromolecule catabolic process ; cell wall organization ; peptidoglycan metabolic process" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MAVEMFYDADADLSIIQGRKVAVIGYGSQGHAHSLSLRDSGVEVKVGLKEGSKSRDKVTEQGLDVDTPAEVAKWADVIMLLAPDTAQAEIFTKDIEPNLEDGNALFFGHGLNIHFGLIKPPANVTIGMVAPKGPGHLVRRQFVDGKGVPCLIAVDQDPKGEGQALALSYAAAIGGARAGVIKTTFKDETETDLFGEQAVLCGGTEELVKTGFDVMVEAGYEPELAYFEVLHELKLIVDLMYEGGIARMNYSVSDTAEFGGYLSGPRVIDADTKKRMQDILKDIQDGTFVKRLVANVEGGNKELEGLRKQNAEHPIEVTGKKLRDLMSWVDRPITETA", - "output": "ketol-acid reductoisomerase activity ; magnesium ion binding ; NADP binding ; isoleucine biosynthetic process ; valine biosynthetic process" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MAKAKFERLKPHVNVGTIGHVDHGKTTLTAAIATVAAITSGGEAKDYASIDSAPEEKARGITINTSHVEYDTPSRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSATDGPMPQTREHILLSRQVGVPYIVVFMNKCDVVDDEELLELVEMEVRELLSDYDFPGDDTPIIHGSATEALKGSQEKYGQPAVVELLNVLDTYIPEPERDIDKAFLMPIEDVFSISGRGTVVTGRVESGIVRVGDEIEIVGIRDTQKTTCTGVEMFRKLLDEGRAGENCGVLLRGTKREDVQRGQVLAKPGSITPHTKFDAEVYVLSKEEGGRHTPFLNGYRPQFYFRTTDVTGAIQLQDGTEMVMPGDNVEMGVELIHPIAMDKGLRFAIREGGRTVGAGVVANVLN", - "output": "cytoplasm ; GTP binding ; GTPase activity ; guanosine tetraphosphate binding ; translation elongation factor activity" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MSDINATRLPIWGIGCNPCVGDDVTSVLTRGEA", - "output": "toxin activity" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "QHWSHGWYPG", - "output": "extracellular region ; hormone activity" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MMLSVFGLSVPISATELLLASFVFCLVFWVVRAWQPRVPKGLKSPPGPWGWPLLGHVLTLGKNPHLVLARLSQHYGDVLQIRIGSTPVLVLSGLDTIRQALVRQGDDFKGRPNLYSFTLISEGQSMSFSPDSGPVWAARRRLAQNALKSFSIASDPASSSSCYLEDHVSKEAEYLIGKFQELMAKVGHFDPYRYVVVSVANVICAMCFGRRYDHDDQELLSIVNLSNEFGDGTASGNPVDFFPILRYLPNPALDFFKDVNEKFSIFIHKMVKEHYKTFEKGHIRDITDSLIEHCQDKRLDENANIQLSDEKIVNVVSDLFGAGFDTVTTAISWCLMYLVTSPNVQEKIQKELDTVIGRERQPRLSDRLQLPYMEAFILEMFRHTSFVPFTIPHSTTKDTSLSGFYIPKERCVFVNQWQINHDQKLWGDPSEFRPERFLTPDGTINKALSEKVILFGLGKRKCIGETIARLEVFLFLAILLQQVEFSVPQGTKVDMTPIYGLTMKHARCEHFQVRMRT", - "output": "endoplasmic reticulum membrane ; mitochondrial inner membrane ; aromatase activity ; estrogen 16-alpha-hydroxylase activity ; estrogen 2-hydroxylase activity ; heme binding ; Hsp70 protein binding ; Hsp90 protein binding ; hydroperoxy icosatetraenoate dehydratase activity ; iron ion binding ; estrogen metabolic process ; fatty acid metabolic process ; retinol metabolic process ; steroid biosynthetic process" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MSYDAYQMRPGQGRDYARQQRQQRSYQLSDDPLRQPGAPYANPAGGYPSSASMNPENPFYAAENPSFQTLAPATSEGHATYTYEEDKIPLTDSADEKYGFSQNGHSTYNLASQSGFPPSTPCGGPSSYSSALGPEDSASQVAWAKRQQAPKRGLTKKIQLTRGHWIVDHPVPTAVKNSVESRWSQGNRTQEFTHMRYTAATCDPDEFTLENGWSLRTSQQYGRDTELLIAITYYNEDRILLARTLHGVMLNIRDICKSKSSKFWRRSAEEGRPGWQRIVVSLIFDGIDPCDKEVLDLLATVGVYQDGVMKRKVDGKDTVAHLFEYTTQLSVDPTPALIQPHADDASNLVPVQMIFCLKQKNSKKINSHRWLFNALGRHLQPELCVLIDAGTKPGHKSLYYLWEAFYNNANLGGACGEIHAMIKNGRKLINPLVAAQNFEYKMSNILDKPLESTFGYVSVLPGAFSAYRFRAIQGRPLQQYFHGDHTLADRLGKKGLHGMDIFTKNMFLAEDRILCFELVAKAGDKWTLTYVKPSKGETDVPEGAAELISQRRRWLNGSFAASIYSLVHFFRIYKSNHGIIRLFFLHIQALYNAIVLLFSWFALANLWLTFSIIIEFLPDELLKNSSHTTLVVFHWINQAAKWIYVFFLVLQFVLALGNRPKGEKPTYIASFIVFGILGLYLIFVSLWLTLKALLETSVSGNIWHTLFNQTTGVLIAALAATFGIYLIASILYADPWHMVTSFPQYMMIAPSFINILNVYAFCNLHDVSWGTKGSDKADALPTVDTKKDKSTEPGTVEEIERHQDDIDETFKAVVSRAVAPFKPAETVEKPTMDDSNKTFRTRLVAFWLLTNGALTVAIENVNGLNTGLTNKQIEQQQSSKQSTYFRIILWATFGLSAFRFIGCLIYWVKRNSTRCFRKT", - "output": "cell periphery ; cell septum ; cytoplasmic vesicle membrane ; plasma membrane ; chitin synthase activity ; cell wall chitin biosynthetic process ; cell wall organization" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MKKLSKRMAALSTKIEDRIYPPLEALSIIKENANAKFDETIEAHIRLGIDPKYTDQQLRTTVALPHGTGQSIKIAVITSGENVSKAKSAGADLFGEEDLVESINKGNMDFDLLIATPDMMPKVAKLGRVLGPRGLMPNPKAGTVTNDIANAIKEFKAGKLEFRADKAGIVHVRFGKASFTKEALFDNLKTLQESIDKNKPSGSKGKYWKSFYVTSTMGPSVQVDISAVQDYQPEG", - "output": "large ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; tRNA binding ; regulation of translation ; translation" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MTSTPITYKTLADSIFNDLINNIIKQHTLTSLTNIKDHSSLLNSSNSNTNSNTNGTIASNGGNGTTSDENNEIENSTIQDKSKLKQLETSRYFRCLNCGRNIAGGRFASHISKCLERKRK", - "output": "DUBm complex ; SAGA complex ; transcription coactivator activity ; zinc ion binding ; chromatin organization ; histone deubiquitination" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MTPMSENNGSENTRDVSAAMMKSRSNSSEYAGGDGSFHASEVESQSSQGASGGNTSASKRRTKASRACDQCRKRKIRCDYDDDKGVCTSCRKNGESCAFERIQLKRGPSKGAVRGHSVSRSISGENNNTAATAVGSGGEFSSPSSRQGSVLLPPLGQYLPQPAPVPSNLNATQQQQFWKVPYHDFQGQRRGSIDSLSSDMSAKSVNIPQEHLLYASPSAGHPPLHSPVTFGPNNSSTDSGYWPFRNSGGEESDELRRKSGSNPPSLKNVSQPPPPPLQQQQQQQYSYSKFNNSFAQYGANGFPSRHGSIASEGMSPSASVPYQSVPMNQSNSNGLSQQQQQPIQWPKVQPKNLPPPQVQVQAADKEETLGNSFQKTIKKRRTVSASSGENKAEPGEYPLARFSSSGNDSLLGGNLVSPAGFVYGQIPEIQLIDIYYEFIHMVFPIIPLNKETVTNEILLVNTQPISPIHEINNYVILWFRNSLELLIRITLKRRSGHFYDSLTHSKERELSNEIRGNSNGGGSNDSKDDNLEMQGVFVTALNECLQKIVDIHPSFRENKDKISPKVKIIYLSTFVLLNYILAVVGYDNSFVLGMSTTIFKDFKVYELLLYDDEDDDATKSGSNDNDNTNNDNNSNNANNDNNDSRFYDENNAMNWDQAGYSITFKRLYVLLIIFDSLQCCSYGGPKLLNVPIEGASERFFQTKPHSNSKWVVDQSPTRMKFILQSVKFGELLAECSMKRRSICDLSRTQLTWEIPPYFLKGVTDEDDELFSLAQLLAAFILIRKEFVDCLLNLQDLETGELPTVDMELCGELIKLLCQLTSIILQALTVMMRTNPKNHIDYNYRPMKPMEHDDSGNSASRKFTTSQAESGKNSGNDFYHKLLGLQDNAEACLTNLLRGSISPYCISMLREIRNVMELVKKMPASLIGVVMACAGTHHNTANNNNNDPLAITFQSQELVVKLSNCMNDMMQITSLLNMIKPVNLSDQDSDNTSATATITTTETISKSLNRDHSIMRRLYYSKAAKRDKKHIYPSSSSSPQLQETITTLKSFVLIGWKLLDDFELGWS", - "output": "cytoplasm ; nucleus ; DNA binding ; DNA-binding transcription factor activity, RNA polymerase II-specific ; zinc ion binding" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MKKAPAGSFPAKPTIAPERPILVFDSGIGGLTVLREARVVMPDRRFVYIADDAGFPYGNWEEEALKRRIIELFGEFIANYDPEIAVIACNTASTLVLEDLRRAYPSVPFVGTVPAIKPAAERTSSGLVSVLATPGTVKRAYTRDLIQSFASRCHVRLVGADGLAAIAEAHIRGESFDEALVMAQIAPCFIEKDGKRTDIVVLACTHYPFLVNVLRRLAPWPVDWLDPAEAIARRMKSLLPARSDDDEFHSQDDLAFFTSRKPDYAIRRLMQGFGLRF", - "output": "glutamate racemase activity ; cell wall organization ; peptidoglycan biosynthetic process ; regulation of cell shape" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MKSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPYYRPRLNEIIAKNKSIDDILIKKNDWYEKNNIKVITSEFATSIDPNNKLVTLKSGEKIKYEKLIIASGSIANKIKVPHADEIFSLYSYDDALKIKDECKNKGKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPLERQLDRDGGLFLKDKLDRLGIKIYTNSNFEEMGDLIRSSCVITAVGVKPNLDFIKDTEIASKRGILVNDHMETSIKDIYACGDVAEFYGKNPGLINIANKQGEVAGLNACGEDASYSEIIPSPILKVSGISIISCGDIENNKPSKVFRSTQEDKYIVCMLKENKIDAAAVIGDVSLGTKLKKAIDSSKSFDNISSLDAILNNL", - "output": "electron transfer activity ; flavin adenine dinucleotide binding ; rubredoxin-NAD+ reductase activity ; oxygen metabolic process ; response to toxic substance" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MSKEDSFEMEGTVVDTLPNTMFRVELENGHVVTAHISGKMRKNYIRILTGDKVRVELTPYDLSKGRITYRAR", - "output": "cytoplasm ; ribosome binding ; rRNA binding ; translation initiation factor activity" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MLMNRFVLKRVRQGKPLNKPRLSIFCSHKHIYAQIIDDMVGRTLVSASTYHYKQGWHSTMKDAQEVGQKLAQQALEKGIQQVVLDRGSYRYHGKIRALAEAARKEGLKI", - "output": "chloroplast ; ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MGDEEKRNRAITARRQHLKSVMLQIAATELEKEESRRESEKQNYLSEHCPPLHIPGSMSEVQELCKQLHAKIDAAEEEKYDMEVKVQKSSKELEDMNQKLFDLRGKFKRPPLRRVRMSADAMLKALLGSKHKVCMDLRANLKQVKKEDTEKERDLRDVGDWRKNIEEKSGMEGRKKMFESES", - "output": "nucleus ; troponin complex ; actin binding ; troponin T binding ; positive regulation of DNA-templated transcription ; regulation of muscle contraction ; skeletal muscle contraction" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MKLRPLHDRVIIKRTEVEAKSAGGIVLTGSAAEKSTRGEIVAVGKGRILDNGEVRALDVKAGDKVLFNEGYGVKTEKIDGEEYLIMSESDILAVEE", - "output": "cytoplasm ; ATP binding ; protein folding chaperone" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MRKLRQTGTTIAGGQTLFQSPEEGWQLYTSAQAPDGKCVCTAVIPAQSTCARDGRSRELRQLMEKVQNVSQSMEVLELRTFRDLQYVRSMETLMRSLDARLRAADGSVSAKSFQELKDRMTELLPLSSVLEQYKADTRTIVRLREEVRNLSGNLAAIQEEMGAYGYEDLQQRVMALEARLHACAQKLGCGKLTGVSNPITIRAMGSRFGSWMTDTMAPSADSRVWYMDGYYKGRRVLEFRTLGDFIKGQNFIQHLLPQPWAGTGHVVYNGSLFYNKYQSNVVVKYHFRSRSVLVQRSLPGAGYNNTFPYSWGGFSDMDFMVDESGLWAVYTTNQNAGNIVVSRLDPHTLEVVRSWDTGYPKRSAGEAFMICGVLYVTNSHLAGAKVYFAYFTNTSSYEYTDVPFHNQYSHISMLDYNPRERALYTWNNGHQVLYNVTLFHVISTAGDP", - "output": "AMPA glutamate receptor complex ; cytoplasm ; extracellular region ; extracellular space ; extrinsic component of synaptic membrane ; glutamatergic synapse ; nucleoplasm ; nucleus ; synaptic membrane ; locomotory behavior ; positive regulation of smooth muscle cell differentiation ; protein secretion ; regulation of vascular associated smooth muscle cell dedifferentiation ; signal transduction ; visual perception" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MSESQTLVVKLGTSVLTGGSRRLNRAHIVELVRQCAQLHAMGHRIVIVTSGAIAAGREHLGYPELPATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDTLRALLDNSIVPVINENDAVATAEIKVGDNDNLSALAAILAGADKLLLLTDQPGLFTADPRSNPQAELIKDVYGIDDALRAIAGDSVSGLGTGGMGTKLQAADVACRAGIDTIIAAGNRPDVIGHAMEGLPVGTCFHAQESPLENRKRWIFGAPPAGELTVDAGATQAILERGSSLLPKGIKIVSGNFSRGEVIRIRNSEGRDIAHGVSRYNSDALRLIAGQHSQQIDAILGYEYGPVAVHRDDMIIR", - "output": "cytoplasm ; ATP binding ; glutamate 5-kinase activity ; RNA binding ; L-proline biosynthetic process ; phosphorylation" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MQAGNNGGAKLKNDEFDNLYQKNINRRETETVIRRSIPVQRDLTGKILPNQVAYYEEIEREVTFGATHHILDKDNFDSYIYPTNFEVREYQFNIVQKSLYQNTLCAIPTGMGKTFIASTVMLNFFRWSKNGKIIFTAPTRPLVAQQIKACLGITGIPHDQAAILLDKSRKNREDIWTQKRVFFTTPQVIENDLKRGVLNPKDIICLVFDEAHRATGSYAYTNVVKFIDRFNSSYRILALTATPGTDIASVQEVVNNLNISNIEIRTEESMDIIRYMKKRYKEKIEIGLTTEIEMIIEQLGIAVKPVLQQAVELGIYDECHPSQINSFVAMQKSQQIIANPTIAEGIKWRNFFILQLLNHVGQMLKRIKIYGIRSFYGYFRNKFSEFTTKYNMGKSTNKIAASFYYHPILKILMKNCDVYTSNSSFIGHDKLQKIINELSDFFLNSRLDSRVIIFTELRESALEIVKTIDNMGSSSIRPHIFIGQARGKENFDDEGFIRKNKPKGRKKADRLKRLEEDKQKQLSKAKQKEQEKVERSSRRTGSSEEAQISGMNQKQQKEVISKFKNGDYNVLVCTSIGEEGLDIGEVDMIICFDTTGSPIKNIQRMGRTGRKRDGKILLLFSGNESRKFEKAMEDYYDLQRLIGQNFVEYKKSDRILPSNITPECRKEFIHISAENNELNNMEDSDEVIRYATQCMLGKVPKSKKSKAKAAKEPKGKSKTFFMPDNVETGIVSAIALVNKKKSNSNESETVIKTECFPNLDDIEKDMLASLSSPVKPEVDDYKDGTFQKTDRFEEKITGSNLKDMLMSFSKRDEESKVTSFSSDGNYVNEPFGNISLGEKLDINDDFASTPIVKADMNIGQYDRSLIENNSRGGVLFKNAFEKEEGLLKKSEKVYFRDHYSIDNTVVIEPIPNFKRYNKSCLINHNPQVENILNLFKGINENKTQITIEMNRSRCIARGIEKGSIQLTGSDFSLANVMVAQKNNEADIVWDTSKTNKNSHENLNELLDSDSDF", - "output": "nucleus ; 3'-5' DNA helicase activity ; ATP binding ; ATP hydrolysis activity ; DNA binding ; DNA repair" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MFQDNPLLAQLKQQLHSQTPRAEGVVKATEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRIVAVIHTEKERESAEPEELIEPFLTRFVGKVQGKNDRLSIVPDHPLLKDAIPCRAARGVQHEFKEGDWAVAEMRRHPLKGDRSFYADLTQYITFADDHFVPWWVTLARHNLEKEAPNGVATEMLDEGLERQDLTALNFVTIDSASTEDMDDALYAEELADGRLQLTVAIADPTAWIAEGSKLDNTAKIRAFTNYLPGFNIPMLPRELSDDLCSLRANEVRPALACRMIIAADGTIDDDIAFFAATIESKAKLAYDNVSDWLENNGTWQPENEDIAQQIRLLHRICLSRSEWRHHHALVFKDRPDYRFVLGEKGEVLDIVAEPRRIANRIVEESMIAANLCAARVLRDKLGFGIYNVHTGFDPANADALAALLKTHGLHVDAEEVLTLEGFCKLRRELDAQPSGFLDSRIRRFQSFAEISTEPGPHFGLGLEAYATWTSPIRKYGDMINHRLLKAVIKGEAIARPQEDITQQMAERRRLNRMAERDVGDWLYARFLNDKAGTNTRFAAEIIDVSRGGMRVRLVDNGAIAFIPAPFLHAVRDELVCSQENGTVQIKGETVYKVTDVIDVTIAEVRMETRSIIARPAA", - "output": "cytosol ; exoribonuclease II activity ; RNA binding ; mRNA catabolic process" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MAKKVEKVVKLQIPAGKANPAPPVGPALGQAGVNIMGFCKEFNARTQEQAGLIIPVEISVYEDRSFTFITKTPPAPVLLKKAAGVEKGSGEPNKTKVATVTKDQVREIAQTKMQDLNAADEEAAMRIIEGTARSMGITVQ", - "output": "ribonucleoprotein complex ; ribosome ; large ribosomal subunit rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MSLLGTINPNINPERTVAGRGTQEEEGEIARVEHNHHNNAASVSTDETVLERSKEIGDEDVAVEEVTRLARQLTRQSTRFSTSGNVENPFLETKEDSTLNPLSPNFKAKNWMKNLLALSSRDPERYPKRVAGVAFKNLSVHGYGSPTDYQKDVFNSVLEVGTLVRRIMGTGKQKIQILRDFDGLVKSGEMLVVLGRPGSGCSTFLKTISGEMNGIYMDEKSYLNYQGISSKQMRKQFRGEAIYTAETDVHFPQLTVGDTLKFAALARAPRNRLPGVSREQYAVHMRDVVMAMLGLTHTMNTRVGNDFVRGVSGGERKRVSIAEATLSGSPLQCWDNSTRGLDSANALEFCKTLNLMTKYAGATVAVAIYQASQSAYDVFDKVTVLYEGRQIYFGRTDEAKEFFTNMGFECPERQTTADFLTSLTSPAERVVKPGFEGKVPQTPDEFVRAWKSSEAYAKLMREIEEYDREFPIGGESLNQFIESRRAMQAKNQRVKSPYTISVWQQIELCMIRGFQRLKGDSSLTMSQLIGNFIMALVIGSVFYNLPDDTSSFYARGALLFFAVLLNAFSSALEILTLYAQRPIVEKQARYAMYHPFAEAIASMLCDMPYKITNAIIFNLTLYFMTNLRREPGAFFVFLLFSFVTTLTMSMLFRTMAASSRTLSQALVPAAILILGLVIYTGFTIPTRNMLGWSRWMNYIDPIAYGFESLMVNEFHNRQFLCPDSAFVPSSGAYDSQPLAYRVCSTVGSVSGSRYVQGDDYLNQSFQYYKSHQWRNLGIMFGFMFFFMFTYLTATEYISESKSKGEVLLFRRGHAQPTGSHDVEKSPEVSSAAKTDEASSKEATGAIQRQEAIFQWKDVCYDIKIKGEPRRILDHVDGWVKPGTCTALMGVSGAGKTTLLDVLATRVTMGVVSGEMLVDGRPRDQSFQRKTGYVQQQDLHLHTTTVREALRFSALLRQPAHVPRQEKIDYVEEVIKLLGMESYADAVVGVPGEGLNVEQRKRLTIGVELAAKPQLLLFLDEPTSGLDSQTSWSILDLIDTLTKHGQAILCTIHQPSAMLFQRFDRLLFLAKGGKTVYFGEIGEKSSTLASYFERNGAPKLPPDANPAEWMLEVIGAAPGSHSDIDWPAVWRDSPERRAVHEHLDELKRTLSQKPIDPSKADPGSYDEFAAPFTIQLWECLLRVFSQYWRTPVYIYSKTALCVLTALYIGFSFFNAQNSAQGLQNQMFSIFMLMTIFGNLVQQIMPNFCTQRSLYEVRERPSKTYSWKAFMAANIIVELPWNTLMAFLIFVCWYYPIGLYRNAEPTDSVHERGALMFLLIWSFLLFTSTFAHMMIAGIELAETGGNLANLLFSLCLIFCGVLAPPQSLPGFWIFMYRVSPFTYLVSAMLSTGVSGTNAVCEPVEFLHFDPPSNMTCKDYMADYISTRGGYLENPSATSDCTFCTISSTDTFLSAVSSHYSDAWRNFGIMWAYIIFNIFAAVFIYWLARVPKGKRTKGST", - "output": "plasma membrane ; ABC-type transporter activity ; ATP binding ; ATP hydrolysis activity ; xenobiotic detoxification by transmembrane export across the plasma membrane" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MKAVVFAYHDMGCTGIQALLDAGYDIAAIFTHPDNPGENHFFGSVARLAAEQGIPVWAPEDVNHPLWIERIREMKPDVLFSFYYRNLLGDEILNLAPKGAFNLHGSLLPKYRGRAPLNWVLVNGESETGVTLHRMVNRADAGDIVAQQAVAIGADDAALTLHRKLCAAATELLSRALPAILAGTTDERPQDHSQATYVGRRTPEDGRLDWELPAQTLHNLVRAVSDPWPGAFGYAGANKFIVWKSRVRHDLPAAKPGTVLSIAPLIVACQDGALEIVTGQTERGVYMQGAQLAQALGLVSGAVISSKPVVAIKRRTRVLILGVNGFIGNHLTERLLQDDNYEIYGLDIGSDAISRFLDCPRFHFVEGDISIHSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRDCVKYNKRIIFPSTSEVYGMCTDKNFDEDSSNLVVGPINKQRWIYSVSKQLLDRVIWAYGDKNGLKFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIEGGKQKRCFTDISDGIEALFRIIENKDGRCDGQIINIGNPDNEASIKELAEMLLACFERHPLRDRFPPFAGFREVESSDYYGKGYQDVEHRKPSIRNAKRCLNWEPKVEMEETVEHTLDFFLRTVELVDDKNP", - "output": "carboxy-lyase activity ; UDP-4-amino-4-deoxy-L-arabinose formyltransferase activity ; UDP-glucuronic acid dehydrogenase activity ; lipid A biosynthetic process ; lipopolysaccharide biosynthetic process ; response to antibiotic" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MSNPTSTPRADGFRMPAEWEPHEQTWMVWPERPDNWRNGGKPAQAAFAAVAKAIARFEPVTVCASAGQYENARARLDDGNIRVVEISSDDAWVRDTGPTFVIDDKGDVRGVDWGFNAWGGFEGGLYFPWQRDDQVARKILEIERRARYRTDDFVLEGGSIHVDGEGTLITTEECLLNHNRNPHLSQVEIERTLRDYLAVDSIIWLPNGLYNDETDGHVDNFCCYVRPGEVLLAWTDDQDDPNYLRCQAALRVLEESRDAKGRKLVVHKMPIPGPLYATQEECDGVDIVEGSQPRDPSIRLAGSYVNFLIVNGGIVAPSFDDPKDAEARAILQRVFPEHEVVMVPGREILLGGGNIHCITQQQPAPRKA", - "output": "agmatine deiminase activity ; protein-arginine deiminase activity ; putrescine biosynthetic process from arginine" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MSLVDLGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEILQIAMQNQINTNPESPDTVTIHAATPQFIIGPGGVVNLTDETGVSAVQFGNSSTSVLATLAALAEASAPLSNSSETPVVATEEVVTAESVDGAIQQVVSSGGQQVITIVTDGIQLGNLHSIPTSGMGQPIIVTMPDGQQVLTVPATDIAEETVISEEPPAKRQCMEIIESRVECAEIEEREALQKQLDEANREAQKYRQQLLKKEQEAEAYRQKLEAMTRIQTNKEAV", - "output": "cytoplasmic ribonucleoprotein granule ; nucleoplasm ; nucleus ; transcription cis-regulatory region binding ; mitochondrion organization ; positive regulation of transcription by RNA polymerase II" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MSPSAVDDAPKATGAAISVKPNIGVFTNPKHDLWISEAEPSADAVKSGADLKPGEVTIAVRSTGICGSDVHFWHAGCIGPMIVEGDHILGHESAGEVIAVHPTVSSLQIGDRVAIEPNIICNACEPCLTGRYNGCEKVEFLSTPPVPGLLRRYVNHPAVWCHKIGNMSWENGALLEPLSVALAGMQRAKVQLGDPVLVCGAGPIGLVSMLCAAAAGACPLVITDISESRLAFAKEICPRVTTHRIEIGKSAEETAKSIVSSFGGVEPAVTLECTGVESSIAAAIWASKFGGKVFVIGVGKNEISIPFMRASVREVDIQLQYRYSNTWPRAIRLIESGVIDLSKFVTHRFPLEDAVKAFETSADPKSGAIKVMIQSLD", - "output": "L-arabinitol 4-dehydrogenase activity ; metal ion binding ; arabinose catabolic process ; D-xylose catabolic process ; galactose catabolic process ; L-arabinose catabolic process to xylulose 5-phosphate" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MEKDTSIPEDLKLAVLEKIKPTEAERKILTAVQEELAAEVKAAAEKLCVADIFVKMVGSAARGTWLSGTHDIDVFISFPEETSREELERRGMEIAREVAKKAEHAEDRHAEHPYLNIVFKGFDVDLVPCFRVESACQLKSAVDRTPFHNEFVKTHIKGREDDVLLMKQFMRGGGVYGSELKTQGFSGYLTELLIIHYGSFENTVKAACLWKPGKKIDIMQHSEMEHTEPLVMVDPTDPKRNVAAALSLDKFCMFMDHCREFMKSPGLNFFFPPPLSPLEDREFLEKLESRKSSQLAIVFKTPDIVDDVLYPQLYKMEQAAAALLHEYDFSVIKTGVWSGKPETVVMLELISGTLPNVKKRIGPPVWVREHAEKFKAKYEGAENVFGGYIEGGKYVFEIQRKYPTAKGLLENQLLNCSLGKQVKSSVSAGFEVIEDAEICRLKDPDFRVFLRKWV", - "output": "ATP binding ; CCA tRNA nucleotidyltransferase activity ; magnesium ion binding ; tRNA binding ; RNA repair ; tRNA 3'-terminal CCA addition" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MASQVMRITLKAYDHELVDSSAKKIIETVKKNGSQVSGPVPLPTKKEVVTILRATHKYKDSREQFEQRTHKRLIDIINPTQKTTESLSRIEMPAGVYIDIKMKQK", - "output": "ribonucleoprotein complex ; ribosome ; structural constituent of ribosome ; tRNA binding ; translation" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MNNLFPFLALNKIALQLGPLAIHWYAIFIVGGAALAVWLACKEAPKRNIKTDDIIDFVLFAFPLGIVGARLYYVIFQWSYYSQHPSQIIAMWDGGGAIYGSLIAGAIVLFVFSYYRMIHPLDLLDITIPGVFLAQAMGRWGNFVNQEAYGKIVSNLDWLPAFIRNQMFIDGHYRMPTFLFESIGTLSGFILVMVFRHRIKGLKRGDIFSFYLVWYGAVRFIVEGMRTDSLMLGPARVSQWLSVLLVIVGLVLFIYRRMKKN", - "output": "plasma membrane ; phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity ; lipoprotein biosynthetic process" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MADAWEEIRRLAADFQRAQFAEATQRLSERNCIEIVNKLIAQKQLEVVHTLDGKEYITPAQISKEMRDELHVRGGRVNIVDLQQVINVDLIHIENRIGDIIKSEKHVQLVLGQLIDENYLDRLAEEVNDKLQESGQVTISELCKTYDLPGNFLTQALTQRLGRIISGHIDLDNRGVIFTEAFVARHKARIRGLFSAITRPTAVNSLISKYGFQEQLLYSVLEELVNSGRLRGTVVGGRQDKAVFVPDIYSRTQSTWVDSFFRQNGYLEFDALSRLGIPDAVSYIKKRYKTTQLLFLKAACVGQGLVDQVEASVEEAISSGTWVDIAPLLPTSLSVEDAAILLQQVMRAFSKQASTVVFSDTVVVSEKFINDCTELFRELMHQKAEKEMKNNPVHLITEEDLKQISTLESVSTSKKDKKDERRRKATEGSGSMRGGGGGNAREYKIKKVKKKGRKDDDSDDESQSSHTGKKKPEISFMFQDEIEDFLRKHIQDAPEEFISELAEYLIKPLNKTYLEVVRSVFMSSTTSASGTGRKRTIKDLQEEVSNLYNNIRLFEKGMKFFADDTQAALTKHLLKSVCTDITNLIFNFLASDLMMAVDDPAAITSEIRKKILSKLSEETKVALTKLHNSLNEKSIEDFISCLDSAAEACDIMVKRGDKKRERQILFQHRQALAEQLKVTEDPALILHLTSVLLFQFSTHSMLHAPGRCVPQIIAFLNSKIPEDQHALLVKYQGLVVKQLVSQSKKTGQGDYPLNNELDKEQEDVASTTRKELQELSSSIKDLVLKSRKSSVTEE", - "output": "cytoplasm ; cytosol ; endoplasmic reticulum ; endoplasmic reticulum membrane ; membrane ; neuron projection ; nucleus ; protein-containing complex ; site of double-strand break ; protein kinase binding ; UFM1 ligase activity ; UFM1 transferase activity ; DNA damage checkpoint signaling ; DNA repair ; erythrocyte differentiation ; hematopoietic stem cell differentiation ; negative regulation of apoptotic process ; negative regulation of IRE1-mediated unfolded protein response ; negative regulation of NF-kappaB transcription factor activity ; negative regulation of protein ubiquitination ; osteoblast differentiation ; positive regulation of autophagy ; positive regulation of cell population proliferation ; positive regulation of glial cell proliferation ; protein K69-linked ufmylation ; protein ufmylation ; regulation of I-kappaB kinase/NF-kappaB signaling ; regulation of inflammatory response ; regulation of intracellular estrogen receptor signaling pathway ; regulation of proteasomal ubiquitin-dependent protein catabolic process ; regulation of protein localization ; response to endoplasmic reticulum stress ; response to L-glutamate ; reticulophagy" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MEYDLTKQICSFLDAHMMLPLINYLKDTQQYQENEINKAMADILSQTGCCDYAINAYESIGRDTAPLQAKKQELVGELNKLKEQCSFVTQYIESKKQQKEQQKELKEQQKEQQKEKDTDKTTPTTTDETTTTTTTAPTTTTTTTTTTITPITVIPFSQLLEKITPEILDSIYRFSKLLFEIGQYGSAREHLEIFLQLSPTHQNKDKRLSALWGILESDILSLNWGQAVGDISPLQDQIDSNGTPVEQLGQRAWLIHRALFVYFYNPESRSSLVDLLLEDKYLNAIQTTCPHILRYLAVAIIVNKKKQQSNVFQRILNALVRVVEQEAYVYRDPITQFISSLFVKFNFEDAQAQLILCEKVLKNDFFLNTCVDEFMENARVCVFETYCNILESIDIDMLCKNLRIDPESSEKWIVEAIRNTRFSAKIDSANNQIKMFTQHNSYRQVMDKTKALFNRGIEMVVGINESRSQQNRKGGDNRKNQRGQNRNQQNQQNQQSNESNETTTTTTTAAAATTTTTTTATPTSA", - "output": "eukaryotic 43S preinitiation complex ; eukaryotic 48S preinitiation complex ; eukaryotic translation initiation factor 3 complex ; eukaryotic translation initiation factor 3 complex, eIF3e ; nucleus ; translation initiation factor activity ; formation of cytoplasmic translation initiation complex ; translational initiation" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MLARSVRTLVVSPKTVFRFRGCLFEKHVSTASADDRAIVSLFDSPHAAFKYPSTISTGLFGHSQLSHPNAFISLAEATLVRAQLLTDRILRARSSRDELLKVVKNLDRLSDMLCSVIDLAELIRNAHPDRNWATAGHHVYEQLCEFMNVLNTHVGLYEVLKLVLADASIVKTLSPEAYQTALIFWRDFEKSAINLPPEERQKFVSLSSDILVLGREFLENANAPRPPASIKPEHMVGIKDKGLGVRLQLQAQFTRRDLLVYPGSLQAQMIMRSAPDEEPRRRMYIAANSSTDQQIXTLERLLKTRAELARLVGRSSFAHMTLDDKMAKTPENVMNFLGALIGQTRPFARRALKTLSARKQAHHGLSSLPTIQAWDRDFYCPPEPPAPPIPLPPLTLGTIFMGLSRLFKYLYGITLRPTEAQTGEVWHSDVHKLEVIDEDKGLIGWIYADLFARHGKSSGAAHYTVRCSRRTDLDDDLGDGGLTGHEELIQQNLEFEKVKRHKIPNQDGVYQLPLVVLLCEFTRPSVLKGATVLEWHDVMTLFHEMGHAMLAMVGRTEYQNVSGTRCATDFVELPSILMEHFLSSPVVLSLFDLDGTHSLRQVGNTHEDPCHSIDTFSQIILASLDQIYHSPAVLDNSTFSTTDELENLTVSKGVIPHVPSTSFQTQFGHLFGYGATYYSYLFDRAIASRVWKKVFEKDPLKREVGEKYKLEVLRWGGGRDPWKMVSKLLDASELEKGDAEAMREVGRWRIEDEVGLPGRH", - "output": "mitochondrial matrix ; metal ion binding ; metalloendopeptidase activity ; proteolysis" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MASIDPYQHIIVEHQYSHRFTVTVIKATNVTKGTFGDMLDTPDPYVELYISSAPDSRKRTKHFNNNINPVWNETFEFILDPNQDNVLEITLMDANYVMDESLGTTTFPILSVKPGEKKQVPFTFNKVTEMILEFSLEVCSSTDLRFSMALCDQEKLFRQKRKNKVINGLRKLLGPEKTQDLNSTSRDVPVIAVLGSGGGFRAMIGFSGVMKALYESGVLDCATYVAGLSGSTWYMSTLYSHPDFPTKGPKEINKELMHNVSYNPLLLLTPQKVKRYVEALWKKKSSGQPVTFTDIFAMLIGETLIKDRMNRKLSHMQEKINDGQCPLPLFTCLHVKPDVSELMFADWVEFSPYEIGMAKYGTFMPPGLFGSKFFMGTVIKKYEENPLHFFMGVWGSAFSILINRVLGVSNNSKGSTMEEEIENLKPKHILGNDSSDSDDEMQEPKGTENAKAEEEYLRNNQASWVQRMLMAILGDSAIFNTREGRAGKVHNFMLGLNLNTSYPYSPLSGLCTQQSMEEDELDAAVADPDEFEQIYEPLDVKSKKIHIVDSGLTFNLPYPLILRPQRGVDLIISFDFSARPSDSSPPFKELLLAEKWARMNKLPFPKIDPHVFDREGLKECYIFKPKNTSVEKDCPTVIHFVLANLQFRNFKAPGVPRETTEEKESADFDIFDDPETPFSTFNFQYPNVAFKQLHDLMEFNTLNNINVIKQAMVESIEYRRQHPSRCSVSLNDVESRKLHHKDSQSKFQM", - "output": "cytoplasmic vesicle ; calcium ion binding ; lysophospholipase activity ; phosphatidyl phospholipase B activity ; phospholipase A2 activity ; phospholipid catabolic process" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "RPDRSHAKSARSVAETMGNYHPHGDASIYDTLVRMAQPWSMRYPLVDGQGNFGSPGNDPPAAMRYCITGDALVALPEGESVRIADIVPGARPNSDNAIDLKVLDRHGNPVLADRLFHSGEHPVYTVRTVEGLRVTGTANHPLLCLVDVAGVPTLLWKLIDEIKPGDYAVIQRSAFSVDCAGFARGKPEFAPTTYTVGVPGLVRFLEAHHRDPDAQAIADELTDGRFYYAKVASVTDAGVQPVYSLRVDTADHAFITNGFVSHNTEAPLTPLAMEMLREIDEETVDFIPNYDGRVQEPTVLPSRFPNLLANGSGGIAVGMATNIPPHN", - "output": "cytoplasm ; ATP binding ; DNA binding ; DNA negative supercoiling activity ; DNA topological change ; intein-mediated protein splicing" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MRVRNRKGATELLEANPQYVVLNPLEAKAKWRDLFGNDNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNRGLFEYSLVSFSQYGMKLNGVWLDLHASDFEGNVMTEYEQKFSNKGQVIYRVEAEF", - "output": "tRNA (guanine-N7-)-methyltransferase activity" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MSPSLTWHDVIGQEKEQPYFKDTLAYVAAERRAGKTIYPPQKDIFNAFRLTELDQVKVVILGQDPYHGPNQAHGLSFSVLPGVPAPPSLGNIYKELVTDIPGFQRPNHGFLQSWAEQGVLLLNTVLTVEAGKAHSHANLGWETFTDRVIAALNEHREGVIFMLWGSHAQKKGRIINTERHYILKAPHPSPLSAHRGFLGCKHFSQANQLLQQQNQQPIDWQPKLPAVE", - "output": "cytoplasm ; uracil DNA N-glycosylase activity ; base-excision repair" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MAQRNGMSPRPPPLGRGRGAGGPSGVGSSPPSSCVPMGATSTAGTGASAAPTATPGHGVHRVEPRGPPGAPPSSGNNSNFWHGPERLLLSQIPVERQALTELEYQAMGAVWRAAFLANSTGRAMRKWSQRDAGTLLPLGRPYGFYARVTPRSQMNGVGATDLRQLSPRDAWIVLVATVVHEVDPAADPTVGDKAGHPEGLCAQDGLYLALGAGFRVFVYDLANNTLILAARDADEWFRHGAGEVVRLYRCNRLGVGTPRATLLPQPALRQTLLRAEEATALGRELRRRWAGTTVALQTPGRRLQPMVLLGAWQELAQYEPFASAPHPASLLTAVRRHLNQRLCCGWLALGAVLPARWLGCAAGPATGTTSPPAASGTETEAAGGDAPCAMAGAVGSAVTIPPQPYGGAGGSAICVPNADAHAVVGADATAAAAAAAAAPTVMVGPTAMAGPAASGTVPRAMLVVVLDELGAVFGYCPLDGHVYPLAAELSHFLRAGVLGALALGRESAPAAEAARRLLPELDREQWERPRWDALHLHPRAALWAREPHGQLAFLLRPGRGEAEVLTLATKHPVICANVEDYLQDARRRADAQALGLDLATVVMEAGGQMIHKKTKKPKGKEDESVMKGKHSRYTRPTEPPLTPQASLGRALRRDDEDWKPSRVPGEDSWYDLDETFWVLGSNRKNDVYQRRWKKTVLRCGLEIDRPMPTVPKGCRPQTFTHEGIQLMGGATQEPLDTGLYAPSHVTSAFVPSVYMPPTVPYPDPAARLCRDMRRVTFSNVATHYHYNA", - "output": "host cell cytoplasm ; host cell nucleus ; viral tegument ; protein serine/threonine kinase inhibitor activity ; suppression by virus of host autophagy ; suppression by virus of host PKR signaling ; suppression by virus of host type I interferon-mediated signaling pathway" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MLDLAFVRANLELVEARLRARGQNPAELLGDFAAVDQHRRERITEAEQLKATRNKLSEEVARLRKAKEDASAVMEETRQLKTKIEDLERAATEAEEQLRERMARIPNLPYEDVPTGASAEDNVEVKRWGTPREFDFAPKPHWELGEQLGILDFERAAKLSGARFAVYWAEGARLERALAAFMLDLHTREHGYTEVLPPLMVNSRSLFGTGQLPKFAEDLFRCEDGEPYQAGKYRENDHWLIPTAEVPLTNLFRDETLDDSQLSTSLVAHTSCFRSEAGSYGKDVRGIIRQHQFQKVELVKFTRPEDSAAEHEALTRHAETVLERLGLPYRRMLLCTGDMGFSSAKTYDLEVWLPGQQVYREISSCSNFDAFQARRAGIRYRPRGQGKSAHVHTLNGSGLAIGRTWLAILENYQQADGSVRIPEALIPYMGTEVIESRNVAQGAK", - "output": "cytoplasm ; ATP binding ; serine-tRNA ligase activity ; selenocysteine biosynthetic process ; seryl-tRNA aminoacylation" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MDVLFSIAKTVSELKKRVVVGTIYTNVEDIIQQTNELIRTLNGSTFHTGGIGTQPQKDWVVQLPQLGTTLLNLDDNYVQSARGIIDYLASFIEAVCDDEMVREASRNGMQPQSPTLIALASSKFKTINFNNSSQSIKNWSAQSRRENPVYEYKNPMVFEYRNSYILHRADQQFGNAMGLRYYTTSNTCQIAAFDSTMAENAPNNTQRFIYHGRLKRPISNVLMKVERGAPNVNNPTILPDPTNQTTWLFNPVQVMNGTFTIEFYNNGQLVDMVRNMGIATVRTFDSYRITIDMIRPAAMTQYVQQLFPVGGPYSHQAAYMLTLSVLDATTESVLCDSHSVDYSIVANTRRDSAMPAGTVFQPGFPWEQTLSNYTVAQEDNLERLLLVASVKRMVM", - "output": "viral envelope ; viral intermediate capsid ; host cell surface receptor binding ; structural molecule activity ; fusion of virus membrane with host plasma membrane" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MTTEQTTMNITEIQELLPHRYPFLMVDRVTSFEKEKTLTAIKNVSVNEPQFTGHFPQLPVFPGVLILEAMAQATGLLAFKSFGAPSGNELYYFASVDKAKFRKPVVPGDQLVIEVEFLKERRGIASFNGVAKVDGVVVCSAELKCARREF", - "output": "cytoplasm ; (3R)-hydroxyacyl- dehydratase activity ; (3R)-hydroxymyristoyl- dehydratase activity ; fatty acid biosynthetic process ; lipid A biosynthetic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MLFDKYGRSLQKLRYVVNDECNYNCVFCHFEGQSRRQGRYLTAEDYGFVTSVFKSLGVADFKITGGEPLLRGDIDLIVANIAKTGAYVTLTTNGYLLRKWVRKLQAAGLKRANVSIHTTDPEKYSKITGVPPSAFREVLRGLTEARDVGISLKLNAVVLRGINTDRDSVKNLVKLAASLGAALQFIELMPSGWGASVFNELYEPIETLVNIIFELGGRPAGVRKELHNRPLYNIAGVTVELIKNFSNPTFCSGCTTMRLTSDGKLKTCIYADSSVDLMPYIKSRDVEGLLYAVRTALARREPRFKLYSSS", - "output": "molybdopterin synthase complex ; 4 iron, 4 sulfur cluster binding ; cyclic pyranopterin monophosphate synthase activity ; GTP 3',8'-cyclase activity ; GTP binding ; metal ion binding ; S-adenosyl-L-methionine binding ; Mo-molybdopterin cofactor biosynthetic process" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MSVVGTPKSAEQIQQEWDTNPRWKDVTRTYSAEDVVALQGSVVEEHTLARRGAEVLWEQLHDLEWVNALGALTGNMAVQQVRAGLKAIYLSGWQVAGDANLSGHTYPDQSLYPANSVPQVVRRINNALQRADQIAKIEGDTSVENWLAPIVADGEAGFGGALNVYELQKALIAAGVAGSHWEDQLASEKKCGHLGGKVLIPTQQHIRTLTSARLAADVADVPTVVIARTDAEAATLITSDVDERDQPFITGERTREGFYRTKNGIEPCIARAKAYAPFADLIWMETGTPDLEAARQFSEAVKAEYPDQMLAYNCSPSFNWKKHLDDATIAKFQKELAAMGFKFQFITLAGFHALNYSMFDLAYGYAQNQMSAYVELQEREFAAEERGYTATKHQREVGAGYFDRIATTVDPNSSTTALTGSTEEGQFH", - "output": "cytosol ; extracellular region ; plasma membrane ; isocitrate lyase activity ; metal ion binding ; methylisocitrate lyase activity ; zymogen binding ; cellular response to hypoxia ; glyoxylate cycle ; isocitrate metabolic process ; response to host immune response ; tricarboxylic acid cycle" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MTVRVRLAPSPTGNLHIGTARTAVFNWLYARHRGGKFILRIEDTDRERSRPEYTENILEGLQWLGLTWDEGPYFQSDRLDLYRQAIQTLLDKGLAYYCYCTPEELEALRAEQKAKGQAPRYDNRHRHLTPEEQAAFEAAGRTPVIRFKIEDDRQIEWQDLVRGRVSWQGADLGGDMVIARAAPRGEIGYPLYNLVVVVDDIAMGITDVIRGEDHIGNTPKQILLYEALGATPPNFAHTPLILNSTGQKLSKRDGVTSISDFRAMGYLAPALANYMTLLGWSPPEGVGELFTLDLAAKHFSFERINKAGARFDWDKLNWLNRQYIQQLEPEEFLAELIPLWQGAGYAFDEERDRPWLFDLAQLLQPGLNTLREAIDQGAVFFIPSVTFDSEAMAQLGQPQSATILAYLLEHLPAEPALTVAMGQQLIQQAAKAAGVKKGATMRTLRAALTGAVHGPDLMAAWQILHQRGWDEPRLAAALKQAQTTS", - "output": "cytoplasm ; ATP binding ; glutamate-tRNA ligase activity ; tRNA binding ; zinc ion binding ; glutamyl-tRNA aminoacylation" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MKQVVIASRESPLAMWQAEHIRARLQALYPGLEVSILGITTQGDRILDKTLNKIGGKGLFVKELELAMQEGQADLAVHSIKDVPMDLPEGFALAAICEREDPRDAFVSSRYASLSELPAGAVVGTASLRRESQIRARYPHLLVKPLRGNLQTRLRKLDEGQYDAIILAASGLKRMGLAERIRMELSTADSLPAVGQGALGIEIRADRTDLMALLAPLNHPATYACVTAERAMGRALGASCQIPVGGYAEQHEHMLVMRGFVATPDGTTLLHAEATAPAEYADALGRTIAKKLLDQGADDVIDAVKAAG", - "output": "hydroxymethylbilane synthase activity ; peptidyl-pyrromethane cofactor linkage ; protoporphyrinogen IX biosynthetic process" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MPNNVTVQELVDKVRLKVLQGEDYLQRKITTSDISRPALEFAGYFKHYPAARIQLLGITETSFAKDLTHEQREEYMTKMCMPQTPCFVISTNLPIPKELKKAAEDAKIPILGTHLTSSQILSNMTSYLLERLAPRKSLHGVLVDISGVGVLITGDSGVGKSETALELVRRGHRLIADDRVEVYARDEQTLVGTAPQILKHLMEIRGIGIIDVSTLYGTGAIMPSDQISLIVHLETWTPDVQFDRLGDRGDTQTIQGVIVPKVSVPVKTGRNLAIIIESAAMNYRAETMGYDATETFDRNLNQLIKQNSERDSKNNKGSAN", - "output": "ATP binding ; magnesium ion binding ; phosphorelay sensor kinase activity ; protein serine/threonine kinase activity ; protein serine/threonine/tyrosine kinase activity ; carbohydrate metabolic process ; regulation of carbohydrate metabolic process" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MKSTFEAAGRVAKGMLKDPSKKYKPFKGIQLPNRQWPNKVLTKAPRWLSTDLRDGNQALPDPMNGQEKLRYFKLLCSIGFKEIEVGFPSASQTDFAFVRHLIETPGLIPDDVTISALTPSREPLILRTIEALRGAKNATVHLYNACSPLFREVVFRNSKQETLDLAIKGSKIVTAATKNALESKETNWGFEYSPETFSDTEPDFALEVCEAVKGMWKPSAAQPIIFNLPATVEMSTPNTYADLIEYFSTNISEREKVCVSLHPHNDRGTAVAAAELGQLAGGDRIEGCLFGNGERTGNVDLVTLAFNLYTQGVSPNLDFSKLDEIIRITEDCNKINVHPRHPYAGNLVFTAFSGSHQDAISKGLKAYDERKAVDPVWKVPYLPLDPHDVNSEYAAIIRVNSQSGKGGVAYLLKTNCGLDLPRALQVEFGSIVKDYSDTKGKELSIGEISDLFYTTYYLEFPGRFSVNDYTLSSNGPQSKCIKCVVDIKGEKKDTPSRVVIEGVGNGPLSALVDALRRQFNISFDIGQYSEHAIGSGNGVKAASYVEIIFNNTSFWGVGIDADVTSAGLKAVMSGVSRASRAFAK", - "output": "mitochondrion ; 2-isopropylmalate synthase activity ; metal ion binding ; leucine biosynthetic process" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MTRLTLALDVMGGDFGPSVTVPAALQALNSNSQLTLLLVGNPDTITPLLAKADFEQRSRLQIIPAQSVIASNARPSQAIRASRGSSMRVALELVKEGRAQACVSAGNTGALMGLAKLLLKPLEGIERPALVTVLPHQQKGKTVVLDLGANVDCDSTMLVQFAIMGSVLAEEVVGIPNPRVALLNIGEEEVKGLDSIRDASAVLKTISSVNYIGYLEANELLTGKTDVLVCDGFTGNVTLKTMEGVVRMFLSLLKSQGEGKKRSWWLLLLKRWLQKSLTRRFSHLNPDQYNGACLLGLRGTVIKSHGAANQRAFAVAIEQAVQAVQRQVPQRIAARLKSVYPAGFELLEDERGKKPNHR", - "output": "cytoplasm ; phosphate:acyl- acyltransferase activity ; fatty acid biosynthetic process ; phospholipid biosynthetic process" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MGYIVALTGGIGSGKSTVANAFADLGINVIDADIIARQVVEPGAPALHAIADHFGENMIAADGTLQRRALRERIFANPEEKNWLNDLLHPLIQQETQHQIQQATSPYVLWVVPLLVENSLYKKANRVLVVDVSPETQLKRTMQRDDVTREHVEQILAAQATREARLAVADDVIDNNGAPDAIASDVARLHAHYLQLASQFVSQEKP", - "output": "cytoplasm ; ATP binding ; dephospho-CoA kinase activity ; coenzyme A biosynthetic process ; phosphorylation" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MNKRAMLGAIGLAFGLLAAPIGASAKGESIVWNEQWKTPSFVSGSLLNGGEQALEELVYQYVDRENGTFRLGGRARDRLALIGKQTDELGHTVMRFEQRHHGIPVYGTMLAAHVKDGELIALSGSLIPNLDGQPRLKKAKTVTVQQAEAIAEQDVTETVTKERPTTENGERTRLVIYPTDGTARLAYEVNVRFLTPVPGNWVYIIDATDGAILNKFNQIDSRQPGGGQPVAGASTVGVGRGVLGDQKYINTTYSSYYGYYYLQDNTRGSGIFTYDGRNRTVLPGSLWTDGDNQFTASYDAAAVDAHYYAGVVYDYYKNVHGRLSYDGSNAAIRSTVHYGRGYNNAFWNGSQMVYGDGDGQTFLPFSGGIDVVGHELTHAVTDYTAGLVYQNESGAINEAMSDIFGTLVEFYANRNPDWEIGEDIYTPGVAGDALRSMSDPAKYGDPDHYSKRYTGTQDNGGVHTNSGIINKAAYLLSQGGVHYGVSVNGIGRDKMGKIFYRALVYYLTPTSNFSQLRAACVQAAADLYGSTSQEVNSVKQAFNAVGVY", - "output": "extracellular region ; metal ion binding ; metalloendopeptidase activity ; proteolysis" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MTNAIDELQAIIAELKTEVEEQRAVIRQSRDRIEHMSAEVRMNIVKNYERIRDKTVAIVGVGGVGSVTADMLTRCGIGKLILFDYDKVELANMNRLFFTPDQAGLSKVEAAARTLTFINPDVRIETHNYNITTIDNFDNFLNTITGDGTVAGEPVDLVLSCVDNFEARMAINAACNEKCLNWFESGVSENAVSGHIQFLRPGDTACFACAPPLVVAENIDEKTLKREGVCAASLPTTMGITAGFLVQNALKYLLNFGEVSDYLGYNALNDFFPKMTLKPNPQCDDRNCLLRQKEFQARPKPVVVQEEAPTDEPLHASNDWGIELVAEDAPSNAPTDLSQSTDVGQGLRLAYEAPEKSSAEATQAATAPVDDTSLEDLMAQMKSM", - "output": "molybdopterin synthase complex ; ATP binding ; metal ion binding ; ubiquitin-like modifier activating enzyme activity ; neuromuscular process" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MATAPATEKKAPAKKAAAPKAAAPKKAAAPKAAAPVGAATGRIAQVIGAVVDVQFTGELPAILNALETDNNGNRLVLEVAQHLGENTVRTIAMDATDGLTRGQPVRDTGAQISVPVGPQTLGRILNVIGEPIDERGPVNSDMTAPIHAKAPEFVDQSTEASILVTGIKVIDLIAPYAKGGKIGLFGGAGVGKTVLIQELINNIAKGHGGVSVFAGVGERTREGNDLYHEFLDAGVIAKDADGNPTPDGSKVALVFGQMNEPPGARARVALSGLTMAEYFRDQEGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLSTDMGALQERITSTTKGSITSVQAIYVPADDLTDPAPATSFAHLDATTTLSRAISELGIYPAVDPLDSTSRVLTPAIVGQEHYETARRVQETLQKYKSLQDIIAILGMDELSEEDKLVVARARKIQRFLSQPFHVAEVFTGIPGKFVPIEETVKSFKAVVDGEYDHLPEAAFYMVGGIDEAVAKAAKLAEEA", - "output": "plasma membrane ; proton-transporting ATP synthase complex, catalytic core F(1) ; ATP binding ; proton-transporting ATP synthase activity, rotational mechanism ; proton-transporting ATPase activity, rotational mechanism" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MLDIQLLRTQLDTVAARLAARGYTLDTEAFTALENERKALQTRTQDLQARRNSLSKQVGEAKRRGEDASAVLAEVSGLGDELKANEAALEGLQGRLAELLQAIPNLPHESVPVGRDETGNVEIRRVGVPRSFDFQVKDHVDIGTPLGLDAETGAKLSGARFTVLRGQMARLHRALAQFMLNTHADEHGYTEVYTPYMVNATSMYGTGQLPKFEEDLFRVPRGDENFYLVPTAEVPVTNFVRDEIVKAADLPLRYVAHTPCFRSEAGAYGRDTRGMIRQHQFDKVELVQVVRPEESLNALETLTGHAETILKKLGLPYRVIVLCTGDMGFGSQKTYDIEVWLPAQDTYREISSCSSMGDFQARRMQARFKDEAGKNQLVHTLNGSGLAVGRTLVAVLENYQNADGSVTVPEVLRPYMGGLEKLLPQG", - "output": "cytoplasm ; ATP binding ; serine-tRNA ligase activity ; selenocysteine biosynthetic process ; seryl-tRNA aminoacylation" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MSNKKRSASSSRWLQEHFSDKYVIQAQKKGLRSRAWFKLDEIQQSDKLFKQGMTVVDLGAAPGGWSQYAVTQIGSKGRVIACDLLPMDPIVGVDFLQGDFRDELVLKALLERVGDKKVQVVMCDMAPNMSGTPAVDIPKSMYLVELALDMCRDVLAPGGSFLVKVFQGDGFDEYLREIRSLFTKVKIRKPDASRARSREVYIVATGRKL", - "output": "cytoplasm ; rRNA (uridine-2'-O-)-methyltransferase activity" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "METLSFEFAAGQPARGKALVGVVGSGDLEVLLEPGQAGKLAIQVVTSVNGAEQRWQQLFERMFREQTPPALNIDIHDFGATPGVVRLRLEQGLEEVGHD", - "output": "cytoplasm ; acyl carrier activity" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MDIILLERIPRLGQMGDIVSVKDGYARNFLLPQGKALRANDANKKHFEKQRAQLKARNLERKSEAQKIAEKLDGKSFIVVRSAGETGQLYGSVSTRDISEIITSAGFSIGRNQIELNHPIKTIGLYLITLSLHPEVQISVVINVARSASEAQRQAEGETLTSAEAIYDIQEKPLAENQEEMNDNDANSINEQA", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MPKAPKGKSAGREKKVIHPYSRKAAQITREAHKQEKKEKLKNEKALRLNLVGEKLQWFQNHLDPQKKRYSKKDACELIERYLNRFSSELEQIELHNSIRDRQGRRHCSRETVIKQTMERERQQFEGYGLEIPDILNASNLKTFREWDFDLKKLPNIKMRKICANDAIPKTCKRKTIITVDQDLGELELNDESSDSDEEMTAVA", - "output": "nucleolus ; nucleoplasm ; nucleus ; preribosome binding ; ribosomal large subunit biogenesis" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MKLTCVVIVAVLFLTVWTFATADDSGNGLEKLFSNAHHEMKNPEASKLNERCLDAGEVCDIFFPTCCGYCILLFCA", - "output": "extracellular region ; host cell presynaptic membrane ; calcium channel regulator activity ; ion channel inhibitor activity ; toxin activity" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MQFSVLAGSLEKMESTAKRLELTGILEELLRETPHEVIAQIVYLIQGKLRPEFEGIELGVAEKLAVRAVSKSSGMPAARIEAAYRRDGDLGRAASSILEQKTQTTFLAEEITVERVYDTLMRIARLEGARSQDMKMRHISSLLNDASPRDACYILKLILGTLRLGIAENTVMDALAAAFTGSKSNRPELERAYNVSSDLGRVAEAVSSGGLEAVRGFAVAVFSPIRPMLADRVRSESEALEKMGAGLAAEYKLDGERVQVHLSGGRVELFSRSLENITAYYPDIVERIPGRLRAREAVLEAEAVAVNEETGEFLPFQELMHRRRKYDIDKAVMRYPITVNFFDILYLDGRDCLGISYSERRALLEGVVDEDSFARCVPVSTIPDESALEDSLENSINAGCEGLMLKLPDAPYRAGSRGGYWLKLKREYRNELGDSLDLVIIGAFFGKGRRTGRYGTLLLATYDDSRDTFPSICKVGTGFTDEDLDQLYQLLSPRVTLKRNPRIDSGMEADVWFDPEVVMEVVASEITLSPVHKTALDSVRKGAGLALRFPKFTGKLRTEKTAEDASTDQEVIALYKSQKKVVPDGQPGV", - "output": "ATP binding ; DNA binding ; DNA ligase (ATP) activity ; metal ion binding ; cell cycle ; cell division ; DNA biosynthetic process ; DNA recombination ; DNA repair ; DNA replication" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MEPSKQEVPKLMETPPNISNDSSATEKGEATRQQQLPNNRYALTVDEVIEQHIGALGFAQILHALLVSIAWIFDAQTTLISIFSDAQPAARLLATGAIVEGASLCGLASGEWEWIGPKSDTVVSEWNLICQHKFLVAVPSTLFFIGSLFGSGVYGYLADSWFGRKKTLLLSCVLTFVTAFAISFSPNVWVYAFLRFANGFFRSGIGSCCIVLATEIVGKKWRGQVGQYGFFFFTLGFLSLPLMAYLERKSWRNLYRIISFLPLGYAVCLLPFAYESPRWLLVKGRNKEAMVVLKKLARLNGKQLPADLSLVDPIPERDDQTSSSEKFWKTKWAVKRIIMVMMAGFGSGFVYYGIQLNAENLNFNLYLTVAVNALMEFPAVFIGSFLLGVMNRRPLFSNSSYLAGFACLLCAVLSIHRVIRAISVAKWLQLAVEAVGFMASSTAYDVLYVYCVELFPTNVRNTAVSLLRQAFMLGASAAPLLVALGRESAMMSFIVFGVASVLSGIVSLWLRETRNAPLYETLAQQGKAEEIENETIMIT", - "output": "plasma membrane ; ATP binding ; carnitine transmembrane transporter activity ; cadaverine transport ; leaf senescence ; monoatomic ion transport" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MKLKQIELKNFRNYEDLKLDFHPNLNIFLGQNAQGKTNILEAIHFLALTRSHRTSHDKELICWSGQEMKVSGLVEKAHATVPLEVQLSSKGRIAKANHLKENRLADYIGQLKILMFAPENLELVKGSPATRRRFMDIELGQIHAVYLYDSMRYNRALKERNAYLKFDQAKIDKNFLTVLDEQLAEHGNKIMFERKTFIEKLEIHAKKIHEQLTHGLETLKITYNQNVKTDFSKELLSRQDHDIFRHQTTVGPHRDDLQFFINEINVADFGSQGQQRTVALSIKLAEIDLIFEETGEYPILLLDDVMSELDNHRQLDLIETSLGKTQTFITTTTLDHLKNLPENLSIFHVTDGTIEKEKE", - "output": "cytoplasm ; ATP binding ; single-stranded DNA binding ; DNA repair ; DNA replication ; SOS response" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MSSSSLPTKSSNALLSVNFNQDHSCIAVGTRDGYSITNCEPFGRVYTNNAGPTSLVEMLFCTSLVALVATSDTDPKSNASPRRLQIVNTKRQSVICELLFPTAILGVKLNRRRLVVVLEQEIYIYDISNMKLLHTIETSPNPMAICALSPSSENCFLAYPSPVASPTSPFSNSGASSSAEANTTAGDVLIFDLLSLSVTNVIQAHKTPISALALNATGTLLATASDKGTVIRVFSIPAAQKLHQFRRGSYAARIYSLNFNAVSTLLAVSSDTETVHIFKLSSGAGAGAKGRSSSNGGESPSLNSFDGSSDSSSPPGSTTNATRGGYEAFMGKHKAAKSNGISGTLRRRSMALGRGITGSVGGYLPNSLTEMWEPSRDFAFLKLPSQGVSSVVALSSTTPHVMVVTSEGYFYSYAIDLEHGGECILMKQYSLIDPDLDTTSTARSDTATPSLAD", - "output": "cytosol ; endosome membrane ; extrinsic component of membrane ; fungal-type vacuole membrane ; phagophore assembly site membrane ; phosphatidylinositol-3,5-bisphosphate binding ; phosphatidylinositol-3-phosphate binding ; autophagy of mitochondrion ; autophagy of nucleus ; protein lipidation ; protein localization to phagophore assembly site ; protein transport" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "NLMQFELLIMKVAGRSGIVWYSD", - "output": "extracellular region ; metal ion binding ; phospholipase A2 activity ; toxin activity ; lipid catabolic process" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MEPELDLTLKLGLPNSTVETHLTLSPPTTTTDQGTNVVDGGEVINHRRGLLGDDEVIHNEPTRNNVEFNIRIYNYVFQQFVGAPNTLNFAPYPMPPSPAPAPETPPVSDEYVLIDVPARRARRNNSTVMTNSWKENATPKRIRGCGGFCGGRIEGMKKCTNMNCNALNTPMWRRGPLGPKSLCNACGIKFRKEEERKAKRNVVIVLDD", - "output": "nucleus ; sequence-specific DNA binding ; zinc ion binding ; cell differentiation ; regulation of DNA-templated transcription" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MTQFASPVLHSLLDTDAYKLHMQQAVFHHYYDVHVAAEFRCRGDDLLGIYADAIREQIQAMQHLRLQDDEYQWLSALPFFKADYLNWLREFRFNPEQVTVSNDNGKLDIRLSGPWREVILWEVPLLAVISEMVHRYRSPQADVAQALDTLESKLVDFSALTAGLDMSRFHLMDFGTRRRFSREVQETIVKRLQQESWFVGTSNYDLARRLSLTPMGTQAHEWFQAHQQISPDLANSQRAALAAWLEEYPDQLGIALTDCITMDAFLRDFGVEFASRYQGLRHDSGDPVEWGEKAIAHYEKLGIDPQSKTLVFSDNLDLRKAVELYRHFSSRVQLSFGIGTRLTCDIPQVKPLNIVIKLVECNGKPVAKLSDSPGKTICHDKAFVRALRKAFDLPHIKKAS", - "output": "nicotinate phosphoribosyltransferase activity ; NAD biosynthetic process" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MLDAQTIATVKATIPLLVETGPKLTAHFYDRMFTHNPELKEIFNMSNQRNGDQREALFNAIAAYASNIENLPALLPAVEKIAQKHTSFQIKPEQYNIVGTHLLATLDEMFNPGQEVLDAWGKAYGVLANVFIHREAEIYHENASKDGGWEGTRPFRIVAKTPRSALITSFEFEPVDGGTVAEYRPGQYLGVWLKPEGFAHQEIRQYSLTRKPDGKGYRIAVKREDGGQVSNWLHHHASVGDGVHLAAPAGDFFMNVAADTPVSLISAGVGQTPMLAMLDTLAKEQHTAQVNWFHAAENGDVHAFADEVSELGRTLPRFTAHTWYREPTESDRAQRLFDSEGLMDLSKLEAAISDPAMQFYLCGPVGFMQFAAKQLVSLGVNNENIHYECFGPHKVL", - "output": "FAD binding ; heme binding ; metal ion binding ; nitric oxide dioxygenase activity ; oxygen binding ; oxygen carrier activity ; cellular response to nitrosative stress ; nitric oxide catabolic process ; response to toxic substance" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MKKKLFVSELIKHFDLEVLNHDFPEIEDREILTPSIKRLGLELSGHFIYDAISGVIVGWGTNESKFFEKIGSEKAKSSIEEIFSRKIPMLVLSKGFDKNYYSTIIEIANKHKTPVIFYKASLSEINTILGIYLLQYFAKKVQVHGTLVSVFGMGILIVGDSGLGKSEAALELVQKGHVLISDDAVLVSHYGNKYFGKAPYITKNLIEVRGLGLIDILSVHGLKSVLPECEINFVVELKDYEQNKSNFDRLGNKVLKYQIGEWKIPKIEIPIRQGRSVASLIEASANMFLSKLNGHDVLAMIQERSLNDE", - "output": "ATP binding ; magnesium ion binding ; phosphorelay sensor kinase activity ; protein serine/threonine kinase activity ; protein serine/threonine/tyrosine kinase activity ; carbohydrate metabolic process ; regulation of carbohydrate metabolic process" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "SLLRKNVDSLTEEEILTLQSVMRELQNDSSEHGFQSIASFHGSPPLCPSPEANKKVACCVHGMASFPQWHRIFTKQMEAALMGHGAKVGMPYWDWTTSFTKLPRFIPYDDEQLNPFVRITDLEDHFTTRDPQPELFKDPEGGDESFFFRQVLIALEQRDYCDFEVQFEVIHNSIHYWIGGHQKYGMSTLEYTAYDPLFFIHHSNVDRLWAIWQELQKYRGLPYDESDCGVELMREPLQPFAQTSATNPNNVTRAHSTPKSLFNYRQLAGYTYDTLTLNGMTISQLESSLLRLQKEEDRVFAGFLLRGIGSSADVTFDLCDKDEHCDFAGTFAVLGGPLEMPWSFDRLFKMDVTKVFKQMRLRPDDSEYHFELEVTARAGTDLSPELLKPGSVSFLPGRKIQNTPDVR", - "output": "extracellular space ; metal ion binding ; oxidoreductase activity ; oxygen carrier activity" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MAASPKINRREHILQCLATMLETSPGQRITTAKLAAEVGVSEAALYRHFPSKARMFEGLIDFIEESLLSRINLIMDEEKDTMRRCQLLLQLLLVFAERNPGISRVLNGDALLGENERLRNRTGQIFSKVETHLKQILREKTLREGKGFNLDEAILANLLLAVAEGRIAQFVRSDFKNKPTEHFAEQWQFIQQQLLQS", - "output": "bacterial nucleoid ; cytoplasm ; sequence-specific DNA binding ; cell cycle ; cell division ; negative regulation of division septum assembly" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MLKFNEYFTGKVKSIGFDSDSIGQASVGVMEKGEYTFSTAKPEEMTVITGSLKVLIPGSSGWEVFNPGETFYVPANSEFNLQVAEASSYLCKYLS", - "output": "guanosine phosphorylase activity ; purine-nucleoside phosphorylase activity ; pyrimidine-nucleoside phosphorylase activity ; thymidine phosphorylase activity ; uridine phosphorylase activity" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MIDRDGFRANVGLILCNQDDRVLWARRAREKAWQFPQGGVKESETTEEAAYRELEEEVGLGVEHVKIIGCTRSWLRYRLPNRYVRYGNKPLCIGQKQIWYLFRFVGEEQDVQLNLTDKPEFDYWCWVNYWYPLREIVYFKRKVYQRALNELAPLIFPDHQSLPPARSNYRKRRRQKTRSRI", - "output": "pyrophosphatase activity" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MLTCLSRRVLVGLFSIGILPLNAMASGSWVADDIGITQSVRGVAISAKPLQSPVALAQDNARIVSISWRYQLMSAAPDGLQVKLCTPTRCMPLEGGSGLSRGLAGEAAATQLTFIYFIAGKGRVNPPLQVINHQVIVNYR", - "output": "bacterial-type flagellum organization" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MLRSHCMEFSEELKTLKDQVRFDGSFRTGTFSNIVIAGMGGSGIAGRIFSEMYSAKPVFVCDDYHIPEFVDGNTEFIAVSYSGNTEETLSAAEEAIKKGAKVHAITSGGRLSEMGVDTIKIPGGLQPRSAVGYLTMPIINTFIRPKHEDIEEAAGLLSDLDKNNTVQENIATEIYAGRRIPVIYGSTPYRSVAYRWKTQFNENAKILAYSNYFSELNHNDTMPLRDTYRKDEFYFMAFDSTDERIRKRIEVTQKITGTSFKKIEARGSSLIARIFYLIHFGDYVTYHLARIRNVDPQDVSAIEDLKKRIS", - "output": "carbohydrate derivative binding ; glucose-6-phosphate isomerase activity ; mannose-6-phosphate isomerase activity ; carbohydrate derivative metabolic process ; carbohydrate metabolic process" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MPEFQLQRRLAADIAGVGLNNIKFNPERLEEVEEALTREDIKKLIKERAVIVNPKRGISSGRLKERKHKRRSKGEGRKHGSRKGKSGARTGDKEIWINKIRKIRRYIRWLRDNNVIDKHTYRLLYKRAKGNYFKNLSDVKSYLRQMGHKV", - "output": "cytosolic large ribosomal subunit ; large ribosomal subunit rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MHFETVIGLEVHVELKTDSKMFSPSPAHFGAEPNSNTNVIDLAYPGVLPVVNRRAVDWAMRASMALNMEIATESKFDRKNYFYPDNPKAYQISQFDQPIGEHGYIDIEVDGETKRIGITRLHMEEDAGKSTHKDGYSLVDLNRQGTPLIEIVSEPDIRSPQEAYAYLEKLRSIIQYTGVSDCKMEEGSLRCDANISLRPYGQEEFGTKAELKNLNSFNYVRKGLEYEEKRQEEELLNGGEVLQETRRFDESTGKTILMRVKEGSDDYRYFPEPDIVPLYVDEAWKERVRQTIPELPDARKEKYVNEYGLPAYDAHVLTLTKEMSDFFEGAVEAGADVKLTSNWLMGGVNEYLNKNQVELQDTKLTPENLAGMIKLIEDGTMSSKIAKKVFPELAENGGDAKQIMEDKGLVQISDESVLLNFVNEALDNNPQSVEDFKNGKGRAKGFLVGQIMKASKGQANPQMVNKLLQQELDKR", - "output": "asparaginyl-tRNA synthase (glutamine-hydrolyzing) activity ; ATP binding ; glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity ; translation" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MDSLRLRPSLLAARAPGAASLPPLRRDHFLPPLCSIHRNGKRPVSLSSQRTQGPSFDQCQKFFGWKSSHHRIPHRPTSSSADASGQPLQSSAEAHDSSSIWKPISSSLDAFYRFSRPHTVIGTALSIVSVSLLAVENLSDVSPLFLTGLLEAVVAALFMNIYIVGLNQLFDIEIDKVNKPTLPLASGEYSPATGVALVSAFAAMSFGLGWAVGSQPLFLALFISFILGTAYSINLPFLRWKRSAVVAALCILAVRAVIVQLAFFLHIQTFVFRRPAVFTRPLIFATAFMTFFSVVIALFKDIPDIEGDRIFGIKSFSVRLGQKKVFWICVGLLEMAYCVAILMGATSACLWSKYATVVGHAILAAILWNRSRSIDLTSKTAITSFYMFIWKLFYAEYLLIPLVR", - "output": "chloroplast thylakoid membrane ; homogentisate phytyltransferase activity ; vitamin E biosynthetic process" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MTTISSFPSIFVPLVGLVFPAIAMASLSLYVQKTKIF", - "output": "chloroplast thylakoid membrane ; photosystem I ; photosynthesis" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MASLKDLKNRIGSVKSTQKITKAMQMVAAAKLRRAQEAAEAARPYAQRMAAVMANLSTAMSGTPGASPLLVGTGKSDAYLLVVMTADRGLCGGFNTNIVKKARERINALKAEGKDVKVICVGKKGADQLKRNFASLIVDKMELSGEKTITGATSVRIGDKIRHMFENGEFDVCELVSAEFVSVISQKPRAKVLIPAIDAIDEGVERPDLGGAVYDAEPDEETILNVLLPRYADTVILSALLENVAGEMGAKMAAMDNATRNAGELIDKLNLVYNRTRQAQITTELTEIISGAEAL", - "output": "plasma membrane ; proton-transporting ATP synthase complex, catalytic core F(1) ; ATP binding ; proton-transporting ATP synthase activity, rotational mechanism ; proton motive force-driven plasma membrane ATP synthesis" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MTQMLTRPDVDLVNGMFYADGGAREAYRWMRANEPVFRDRNGLAAATTYQAVLDAERNPELFSSTGGIRPDQPGMPYMIDMDDPQHLLRRKLVNAGFTRKRVMDKVDSIGRLCDTLIDAVCERGECDFVRDIAAPLPMAVIGDMLGVLPTERDMLLKWSDDLVCGLSSHVDEAAIQKLMDTFAAYTEFTKDVITKRRAEPTDDLFSVLVNSEVEGQRMSDDEIVFETLLILIGGDETTRHTLSGGTEQLLRHRDQWDALVADVDLLPGAIEEMLRWTSPVKNMCRTLTADTVFHGTELRAGEKIMLMFESANFDESVFGDPDNFRIDRNPNSHVAFGFGTHFCLGNQLARLELRLMTERVLRRLPDLRLADDAPVPLRPANFVSGPESMPVVFTPSAPVLA", - "output": "heme binding ; iron ion binding ; monooxygenase activity ; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen ; cholesterol catabolic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MQSWSRVYCSLAKRGHFNRISHGLQGLSAVPLRTYADQLIDADVTVIGSGPGGYVAAIKAAQLGFKTVCVEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGKDFASRGIEMSEVRLNLDKMMEQKSTAVKALTGGIAHLFKQNKVIHVNGYGKITGKNQVTATKVDGGTQVVDTKNILIATGSEVTPFPGITIDEDTIVSSTGALSLKKVPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGIGIDMEISKNFQRILQKQGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPVNTRFQTKIPNIYAIGDVVAGPMLAHKAEDEGIICVEGMAGGAVHIDYNCVPSVIYTHPEVAWVGKSEEQLKEEGIEYKVGKFPFAANSRAKTNADTDGMVKILGQKSTDRVLGAHILGPGAGEMVNEAALALEYGASCEDIARVCHAHPTLSEAFREANLAASFGKSINF", - "output": "acrosomal vesicle ; mitochondrial matrix ; mitochondrion ; motile cilium ; nucleus ; oxoglutarate dehydrogenase complex ; dihydrolipoyl dehydrogenase activity ; flavin adenine dinucleotide binding ; histone succinylation" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MEFSLDNNINNGAVIKVIGVGGGGGNAVNRMIEENVKGVEFITANTDVQALKHSKAETVIQLGPKYTRGLGAGSQPEVGQKAAEESEQVISESLQGADMIFITAGMGGGTGTGAAPVVAKIAKELGALTVGVVTRPFSFEGPKRGRFAAEGIALLKENVDTLLIISNNRLLEVVDKKTPMLEAFREADNVLRQGVQGISDLITAPGYVNLDFADVKTVMENQGTALMGIGVASGEERVIEATKKAISSPLLETSIDGAEQVLLNITGGLDMTLFEAQDASDIVTNAASGDVNIILGTSINEDLGDEIRVTVIATGIDESKKDRKPHRQTRQAVQPMQQTTQSVEMDQPKSQEEASAFGDWDIRREQNTRPKVDESSLEQVDKKEFDTFHREEPNHNDDELSTPPFFRRKR", - "output": "cell division site ; cytoplasm ; GTP binding ; GTPase activity ; division septum assembly ; FtsZ-dependent cytokinesis ; protein polymerization" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MAYSYTEKKRIRKSFAELPTVMDIPYLLSIQVDSYEQFLQEHKKPKARENTGLQAAYSSIFPIESHSGNAELQFVEYYLGTPEFDERECILRGSTFAAPMRVKIRLIIKDKDSKDKDSKAAIKDIREQSVYMGEMPLMTANGTFIINGTERVIVSQLHRSPGVFFDHDKGKSHSSGKVLYNARIIPYRGSWLDFEFDAKDLVFARIDRRRKLLASIILRALGLSTSEILDLFFDKVKVYKGEEQFEIDLVADRLRGEMAQFDIVTPEGDVVVEQGKRINARRIRQLEEAGMTKISIPDEYLYERILAEDIIVNDEVIARANTLIDHELLVKLSAFEASESIKEFSILFTNDIDQGSYIADTLRADSTSSREEALIEIYKVMRPGEPPTVETAEKLFDSMFFNADRYDLSNVGRMKFNRRLGLDFVDTDDADIQRERSVLTNADIVNVLKELIEIRNGRGEVDDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVKERLSSAESDNLSPQDLINSKPVAAAVKEFFGSSQLSQFMDQNNPLSEVTHKRRVSALGPGGLTRERAGFEVRDVHDTHYGRVCPIETPEGPNIGLINSLATFAKTNSFGFLETPYRRVVDGKVTDVIEYLSAIEEVGTVIAQADSPVTADGALSDEMVSVRSYGEFVRMPPEKVTHMDVSPSQVVSVAAGLIPFLEHDDANRALMGSNMQRQAVPTLRADKPLVGTGMERHVARDSGVCVIAKRGGVIEDVDASRIVVRVNEAEMIAGEAGIDIYNLVKYTRSNQNTCINQRIIVNQGDEIAFGDILADGPSTDLGELALGQNIRIAFMPWNGYNFEDSILLSEKVVKEDRFTTIHIQELTCVARDTKLGTEEITADIPNVGEAALSSLDEAGIVYIGAEVDAGDILVGKVTPKGETQLTPEEKLLRAIFGEKAADVKDTSLRVPTSSKGTVIDVQVFTRDGVEKDARARAIEKSQLDSYRKDLKEELRIFEEAARGRIGNLLDGQKVSGGSGLKAGTIMALADMKDMSLETLLDIQPVEEEISERLTQIAEYLVDKQKDIDVKFAEKKRKLTAGDDLQHGVQKIVKVYLAVKRRIQPGDKMAGRHGNKGVVSRIMPVEDMPYDEHGNTVDIVLNPLGVPSRMNIGQVLETHLGMAAKGLGEKIDGMLKSQAAIKDLREFLDKIYNQVGGEQVDLDSLTDDDIMALADNLRAGVPMGTAVFDGAKESQVKDLLELAGMDRDGQQTLYDGRTGQKFDRKVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGATYTLQEMLTVKSDDVEGRTRMYKNIVDGEQYMDPGMPESFNVLTKEIKSLGINIELKQTH", - "output": "DNA-directed RNA polymerase complex ; DNA binding ; DNA-directed 5'-3' RNA polymerase activity ; ribonucleoside binding ; DNA-templated transcription" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MKVGVVGLQGDVSEHIEATKMAIEKLELPGEVIWLKRPEQLKGVDAVIIPGGESTTISRLMQRTGLFEPIKKMVEDGLPVMGTCAGLIMLAKEVLGATPEQKFLEVLDVKVNRNAYGRQVDSFEAPVKLAFDDEPFIGVFIRAPRIVELLSEKVKPLAWLEDRVVGVEQENIIGLEFHPELTNDTRIHEYFLRKVI", - "output": "glutaminase activity ; pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity ; glutamine catabolic process ; pyridoxal phosphate biosynthetic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MIFDVKAPILGFETIHKMHLQKIDEIFLRLNSAEDNSVVSFTLVNPFALRKYEFEVPTPLKILLELEGAKSVLVANIMVVQTPIELSTVNYLAPLIFNLDKQLMGQVVLDSKKYPHYHLRENILSHTHE", - "output": "cytoplasm ; bacterial-type flagellum assembly ; regulation of translation" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MRLNTLSPANGARHSRKRLGRGIGSGFGKTSGRGHKGQKSRSGSSIRRGFEGGQMPLYRRLPKFGFNSRKKNITTEVRLSDLSNLSTNIIDLNVLKQENIIKKNIKYAKIILSGKLTVPLIIRGLLVSKGARSEIENTGGKVEG", - "output": "large ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MSERNQRKVYTGRVVSDKMDKTITVLVETYKTHSLYGKRVKYSKKYKAHDEQNQAKLGDIVKIMETRPLSATKRFRLVEIVEEAVVI", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MKIAIYPGSFDPVTNGHIDIIQRGRHLFDKIIVSILLNPGKKALFSLDERLDMLTESLKDIDGVEVDSFAGLLIDYAERKNAKAILRGMRAVSDFEYEFQMALMNRRLNRDIQTVFLMTGMRWIYTSSSIIKEAATFGGDISGMVPAIVEKKLEEKIGYVVNHKKAED", - "output": "cytoplasm ; ATP binding ; pantetheine-phosphate adenylyltransferase activity ; coenzyme A biosynthetic process" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MKIGTQNQAFFPENILEKFRYIKEMGFDGFEIDGKLLVNNIEEVKAAIKETGLPVTTACGGYDGWIGDFIEERRLNGLKQIERILEALAEVGGKGIVVPAAWGMFTFRLPPMTSPRSLDGDRKMVSDSLRVLEQVAARTGTVVYLEPLNRYQDHMINTLADARRYIVENDLKHVQIIGDFYHMNIEEDNLAQALHDNRDLLGHVHIADNHRYQPGSGTLDFHALFEQLRADNYQGYVVYEGRIRAEDPAQAYRDSLAWLRTC", - "output": "cytosol ; identical protein binding ; manganese ion binding ; racemase and epimerase activity, acting on carbohydrates and derivatives ; carbohydrate metabolic process" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MQLKRVAEAKLPTPLGDFLMVGFEELATGHDHAALVFGDISGKTPVLARVHSECLTGDALFSLRCDCGFQLEAALTHIAEEGRGILIYHRQEGRNIGLLNKIRAYALQDQGYDTVEANHQLGFAADERDFTLCADMFKLLGVDEVRLLTNNPKKVEILTEAGINIVERVPLIVGRNPNNEHYLDTKAAKMGHLLSK", - "output": "cytosol ; GTP binding ; GTP cyclohydrolase II activity ; zinc ion binding ; riboflavin biosynthetic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MADEVILLDFWPSPFGVRARIALREKGVEFEYREENLRDKSPLLLQMNPVHKKIPVLIHNGKPVCESMNVVQYIDEVWSDKNPILPSDPYQRAQARFWVDFVDTKLFEPADKIWQTKGEEQETAKKEYIEALKILETELGDKPYFGGDTFGFVDIAMTGYYSWFEASEKLANFSIEPECPTLMASAKRCLQRESVVQSLHDSEKILAFAYKIRKIYCV", - "output": "cytoplasm ; cytosol ; glutathione transferase activity ; glutathione metabolic process ; toxin catabolic process" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MGEKDSETAPIWGKTRERERSNNNNIQPMDLESSSSVSGQQRSLTQSRSSYEERGRGVKEFRSWFPWLIPCFVVANVAVFVITMYVNNCPKKSGDCFADFLGRFSFQNTRENPLLGPSSLTLQTMGGLDVKKVVKGDEGWRLLSCNWLHGGVVHLLMNMLTLLFIGIRMEREFGFIRIGLLYLISGFGGSILSALFLRSNISVGASGAVFGLLGGMLSEIFINWTIYSNKVVTIVTLVLIVAVNLGLGVLPGVDNFAHIGGFATGFLLGFVLLIRPHYGWINQRNGPGAKPHRFKIYQGILWTISLLILVAGFIVGLISLFNNVDGNEHCSWCHYLSCVPTSKWSCNREPASCTTTQLGNQLSMTCLRNGKSASYILANPSDSRINSLCVQLCR", - "output": "membrane ; plasmodesma ; serine-type endopeptidase activity ; proteolysis" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MSTDSIEVAIIGAGITGITLALGLLSRGIPVRVYERARDFHEIGAGIGFTPNAEWAMKVVDPRIQAAFKRVATPNASDWFQWVDGFNESGTDPRETEEQLLFKIYLGERGFEGCHRADFLGELARLLPEGVVTFQKALDTVEPAADNSLGQLLRFQDGTTATAHAVIGCDGIRSRVRQILLGEDHPTASAHYSHKYAARGLIPMDRAREALGEDKVATRFMHLGPDAHALTFPVSHGSLLNVVAFVTDPNPWPYADRWTAQGPKKDVTAAFSRFGPTMRTIIDLLPDPIDQWAVFDTYDHPPNTYSRGAVCIAGDAAHAAAPHHGAGAGCGVEDAAVLCAVLHMAAKKVNTAKTGSEGKAALITAAFETYDSVCRERAQWLVESSRVIGNLCHDEVYWRSHRIWDYDIDAMMRETAEVFEAQVAGVARN", - "output": "membrane ; FAD binding ; monooxygenase activity ; biosynthetic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MDAIKCSSSFLHHTKLNTLFSNHTFPKISAPNFKPLFRPISISAKDRRSNEAENIAVVEKPLKSDRFFISDGLPSPFGPTVRDDGVNFSVYSTNSVSATICLISLSDLRQNKVTEEIQLDPSRNRTGHVWHVFLRGDFKDMLYGYRFDGKFSPEEGHYYDSSNILLDPYAKAIISRDEFGVLGPDDNCWPQMACMVPTREEEFDWEGDMHLKLPQKDLVIYEMHVRGFTRHESSKIEFPGTYQGVAEKLDHLKELGINCIELMPCHEFNELEYYSYNTILGDHRVNFWGYSTIGFFSPMIRYASASSNNFAGRAINEFKILVKEAHKRGIEVIMDVVLNHTAEGNEKGPIFSFRGVDNSVYYMLAPKGEFYNYSGCGNTFNCNHPVVRQFILDCLRYWVTEMHVDGFRFDLGSIMSRSSSLWDAANVYGADVEGDLLTTGTPISCPPVIDMISNDPILRGVKLIAEAWDAGGLYQVGMFPHWGIWSEWNGKFRDVVRQFIKGTDGFSGAFAECLCGSPNLYQGGRKPWHSINFICAHDGFTLADLVTYNNKNNLANGEENNDGENHNYSWNCGEEGDFASISVKRLRKRQMRNFFVSLMVSQGVPMIYMGDEYGHTKGGNNNTYCHDNYMNYFRWDKKEEAHSDFFRFCRILIKFRDECESLGLNDFPTAKRLQWHGLAPEIPNWSETSRFVAFSLVDSVKKEIYVAFNTSHLATLVSLPNRPGYRWEPFVDTSKPSPYDCITPDLPERETAMKQYRHFLDANVYPMLSYSSIILLLSPIKDP", - "output": "chloroplast ; chloroplast isoamylase complex ; isoamylase activity ; amylopectin biosynthetic process ; starch biosynthetic process ; starch catabolic process" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MQIKRSIEKIPGGMMLVPLFLGALCHTFSPEAGKYFGSFTNGMITGTVPILAVWFFCMGASIKLSATGTVLRKSGTLVVTKIAVAWVVAAIASRIIPEHGVEVGFFAGLSTLALVAAMDMTNGGLYASIMQQYGTKEEAGAFVLMSLESGPLMTMIILGTAGIASFEPHVFVGAVLPFLVGFALGNLDPELREFFSKAVQTLIPFFAFALGNTIDLTVIAQTGLLGILLGVAVIIVTGIPLIIADKLIGGGDGTAGIAASSSAGAAVATPVLIAEMVPAFKPMAPAATSLVATAVIVTSILVPILTSIWSRKVKARAAKIEILGTVK", - "output": "plasma membrane ; 2-keto-3-deoxygluconate:proton symporter activity" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MAAARCLRWGLSRAEAWLLPPPTSCCHRALHRQVEGTEFRSAYSLDKLYPESRGADTAWRVPGDAKQGNDDIPVDRLTISYCRSSGPGGQNVNKVNSKAEVRFHLASADWIAEPVRQKMALTHKNKINRAGELILTSEYSRYQFRNLADCLQKIRDMIAEASQPATEPSKEDAALQKLRIENMNRERLRKKRINSAIKTSRRVGTD", - "output": "mitochondrial inner membrane ; mitochondrial large ribosomal subunit ; mitochondrion ; nucleoplasm ; plasma membrane ; aminoacyl-tRNA hydrolase activity ; translation release factor activity, codon nonspecific ; mitochondrial translational termination" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MTVLAPAWSPNSSLLLLLLLLSPCLRGTPDCYFSHSPISSNFKVKFRELTDHLLKDYPVTVAVNLQDEKHCKALWSLFLAQRWIEQLKTVAGSKMQTLLEDVNTEIHFVTSCTFQPLPECLRFVQTNISHLLKDTCTQLLALKPCIGKACQNFSRCLEVQCQPDSSTLLPPRSPIALEATELPEPRPRQLLLLLLLLLPLTLVLLAAAWGLRWQRARRRGELHPGVPLPSHP", - "output": "cell surface ; external side of plasma membrane ; extracellular region ; extracellular space ; cytokine activity ; receptor tyrosine kinase binding ; embryonic hemopoiesis ; homeostasis of number of cells within a tissue ; lymphocyte differentiation ; natural killer cell differentiation ; negative regulation of apoptotic process in bone marrow cell ; positive regulation of cell cycle ; positive regulation of cell population proliferation ; positive regulation of cell proliferation in bone marrow ; positive regulation of myoblast differentiation ; positive regulation of myoblast fusion ; positive regulation of natural killer cell differentiation ; positive regulation of natural killer cell proliferation ; positive regulation of osteoclast proliferation ; positive regulation of protein phosphorylation ; positive regulation of transcription by RNA polymerase II ; protein phosphorylation ; regulation of myeloid dendritic cell activation" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MAAQRLAALHAAAPSAFSSTSSASHGRPAARSSTTALLPVALPRASATLRAAPSRLLPQEAKAAGSGRSVMCMASASASAASAAVASGAAELKAAREDIRELLKTTHCHPILVRLGWHDSGTYDKNIKEWPQRGGANGSLRFDVELKHGANAGLVNALKLVQPIKDKYPNISYADLFQLASATAIEEAGGPKIPMTYGRIDVTGPEQCPPEGKLPDAGPSAPADHLRKVFYRMGLDDKEIVVLSGAHTLGRSRPERSGWGKPETKYTKNGPGAPGGQSWTAEWLKFDNSYFKEIKEKRDQDLLVLPTDAALFEDPTFKVYAEKYAEDQEAFFKDYAGAHAKLSNLGAKFNPPEGFTLDG", - "output": "chloroplast stroma ; heme binding ; L-ascorbate peroxidase activity ; metal ion binding ; peroxidase activity ; cellular response to oxidative stress ; hydrogen peroxide catabolic process ; response to reactive oxygen species" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MRRTLVYGLGESGEAATRALLQRGERPLAADAASGEGPRRVLEELGVEGVLGAGPEVLDGVDRVVVSPGVRPRDAVLREARRRGIPVISEVGLGLELLGPGVRVAAVTGTNGKTTVVDMARHILRVAGVAHAVAGNSWRALTGCLEEVRRAGVLVLEVSSFQLHHLPPPGFEVAALLNVRPDHLNWHSSFEEYARDKLRVFGGQGPGDLALLSADDPICRRAAGGLRAEVVLVGEGETGVRDGRLLLRGEFLAGERELGFAGGHNLKNALFAAAAAARLGAGLEAIREALRGYRLKPHRMQVVAEEGGVTYIDDSKATNPAAVAAALLSLGGRPAVLILGGSEKETDFEEVLPHLGGCRAVVCQGEAGPRLRDFLSERWGGEVVLAGDLASAVEAARRLARPGDAVLLSPGCASFDQFSGYEERGEAFARLAGGRRAVRG", - "output": "cytoplasm ; ATP binding ; UDP-N-acetylmuramoylalanine-D-glutamate ligase activity ; cell cycle ; cell division ; cell wall organization ; peptidoglycan biosynthetic process ; regulation of cell shape" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MVPFVLASASPARRQLLQQIGIDPIIQPSHFDESVIQAATPTELVRLLARCKAETVAQSYSAPALILGCDSVLVLGGEIYGKPASPEMAIARWQQMRGQTADLLTGHALIDLAQGRTCVEVESTQVVFAQVSDAEIAAYVASGEPLACAGCFALDGQGGAFVEKIVGTPSNVIGLSLPLLRRLLLSLGYTLADVQNKK", - "output": "cytoplasm ; nucleoside triphosphate diphosphatase activity ; nucleotide metabolic process" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MEANHQRNDLGLVALTMLAQYHNISLNPEEIKHKFDLDGKGLSLTSWLLAAKSLALKAKHIKKEISRLHLVNLPALVWQDNGKHFLLVKVDTDNNRYLTYNLEQDAPQILSQDEFEACYQGQLILVTSRASVVGQLAKFDFTWFIPAVIKYRKIFLETLIVSIFLQIFALITPLFFQVVMDKVLVHRGFSTLNIITVALAIVIIFEIVLSGLRTYVFSHSTSRIDVELGAKLFRHLLSLPISYFENRRVGDTVARVRELDQIRNFLTGQALTSVLDLLFSFIFFAVMWYYSPKLTLVILGSLPCYILWSIFISPILRRRLDDKFARSADNQAFLVESVTAINMIKAMAVAPQMTDTWDKQLASYVSSSFRVTVLATIGQQGVQLIQKTVMVINLWLGAHLVISGDLSIGQLIAFNMLSGQVIAPVIRLAQLWQDFQQVGISVTRLGDVLNSPTEQYQGKLSLPEIKGDISFKNIRFRYKPDAPTILNNVNLEIRQGEVIGIVGRSGSGKSTLTKLLQRFYIPENGQVLIDGHDLALADPNWLRRQIGVVLQDNVLLNRSIRENIALSDPGMPMERVIYAAKLAGAHDFISELREGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDEATSALDYESEHIIMQNMQKICQGRTVILIAHRLSTVKNADRIIVMEKGEIVEQGKHHELLQNSNGLYSYLHQLQLN", - "output": "plasma membrane ; type I protein secretion system complex ; ABC-type peptide transporter activity ; ABC-type protein transporter activity ; ATP binding ; ATP hydrolysis activity ; protein secretion by the type I secretion system ; proteolysis" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MKLRANRVGEQMKKELGDIISRKIKDPRIGFVTVTDVQVSGDLQIAKVYISVLGDEEQKENTLKGLAKAKGFIRSEIGQRIRLRKTPEITFEFDESIGYGHRIDTLLHEINKDGKREE", - "output": "cytoplasm ; maturation of SSU-rRNA" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MALPSLGQDSWSLLRVFFFQLFLLPSLPPASGTGGQGPMPRVKYHAGDGHRALSFFQQKGLRDFDTLLLSDDGNTLYVGAREAVLALNIQNPGIPRLKNMIPWPASERKKTECAFKKKSNETQCFNFIRVLVSYNATHLYACGTFAFSPACTFIELQDSLLLPILIDKVMDGKGQSPFDPVHKHTAVLVDGMLYSGTMNNFLGSEPILMRTLGSQPVLKTDIFLRWLHADASFVAAIPSTQVVYFFFEETASEFDFFEELYISRVAQVCKNDVGGEKLLQKKWTTFLKAQLLCAQPGQLPFNIIRHAVLLPADSPSVSRIYAVFTSQWQVGGTRSSAVCAFSLTDIERVFKGKYKELNKETSRWTTYRGSEVSPRPGSCSMGPSSDKALTFMKDHFLMDEHVVGTPLLVKSGVEYTRLAVESARGLDGSSHVVMYLGTSTGSLHKAVVPQDSSAYLVEEIQLSPDSEPVRNLQLAPAQGAVFAGFSGGIWRVPRANCSVYESCVDCVLARDPHCAWDPESRLCSLLSGSTKPWKQDMERGNPEWVCTRGPMARSPRRQSPPQLIKEVLTVPNSILELPCPHLSALASYHWSHGRAKISEASATVYNGSLLLLPQDGVGGLYQCVATENGYSYPVVSYWVDSQDQPLALDPELAGVPRERVQVPLTRVGGGASMAAQRSYWPHFLIVTVLLAIVLLGVLTLLLASPLGALRARGKVQGCGMLPPREKAPLSRDQHLQPSKDHRTSASDVDADNNHLGAEVA", - "output": "plasma membrane ; chemorepellent activity ; semaphorin receptor binding ; angiogenesis ; axonogenesis ; negative chemotaxis ; negative regulation of angiogenesis ; negative regulation of axon extension involved in axon guidance ; neural crest cell migration ; positive regulation of cell migration ; positive regulation of excitatory synapse assembly ; positive regulation of inhibitory synapse assembly ; regulation of cell shape ; regulation of endothelial cell migration ; semaphorin-plexin signaling pathway ; T cell differentiation involved in immune response ; T-helper 1 cell differentiation" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MPEQAQQGEQSVKRRRVTRACDECRKKKVKCDGQQPCIHCTVYSYECTYKKPTKRTQNSGNSGVLTLGNVTTGPSSSTVVAAAASNPNKLLSNIKTERAILPGASTIPASNNPSKPRKYKTKSTRLQSKIDRYKQIFDEVFPQLPDIDNLDIPVFLQIFHNFKRDSQSFLDDTVKEYTLIVNDSSSPIQPVLSSNSKNSTPDEFLPNMKSDSNSASSNREQDSVDTYSNIPVGREIKIILPPKAIALQFVKSTWEHCCVLLRFYHRPSFIRQLDELYETDPNNYTSKQMQFLPLCYAAIAVGALFSKSIVSNDSSREKFLQDEGYKYFIAARKLIDITNARDLNSIQAILMLIIFLQCSARLSTCYTYIGVAMRSALRAGFHRKLSPNSGFSPIEIEMRKRLFYTIYKLDVYINAMLGLPRSISPDDFDQTLPLDLSDENITEVAYLPENQHSVLSSTGISNEHTKLFLILNEIISELYPIKKTSNIISHETVTSLELKLRNWLDSLPKELIPNAENIDPEYERANRLLHLSFLHVQIILYRPFIHYLSRNMNAENVDPLCYRRARNSIAVARTVIKLAKEMVSNNLLTGSYWYACYTIFYSVAGLLFYIHEAQLPDKDSAREYYDILKDAETGRSVLIQLKDSSMAASRTYNLLNQIFEKLNSKTIQLTALHSSPSNESAFLVTNNSSALKPHLGDSLQPPVFFSSQDTKNSFSLAKSEESTNDYAMANYLNNTPISENPLNEAQQQDQVSQGTTNMSNERDPNNFLSIDIRLDNNGQSNILDATDDVFIRNDGDIPTNSAFDFSSSKSNASNNSNPDTINNNYNNVSGKNNNNNNITNNSNNNHNNNNNDNNNNNNNNNNNNNNNNNSGNSSNNNNNNNNNKNNNDFGIKIDNNSPSYEGFPQLQIPLSQDNLNIEDKEEMSPNIEIKNEQNMTDSNDILGVFDQLDAQLFGKYLPLNYPSE", - "output": "nucleus ; DNA-binding transcription factor activity, RNA polymerase II-specific ; sequence-specific DNA binding ; zinc ion binding ; positive regulation of transcription by RNA polymerase II" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MTNIRKSHPLIKIINESFIDLPAPSNISAWWNFGSLLGVCLILQILTGLFLAMHYTSDTATAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGMYYGSHTFSETWNIGILLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIISALAAVHLLFLHETGSNNPSGLTSDSDKIPFHPYYTIKDILGLLLLILILMLLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVTALVLSILILAILPLLNTSKQRGMMFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFITIGQLASILYFLTILILMPISGMIENQLLKW", - "output": "mitochondrial inner membrane ; respiratory chain complex III ; metal ion binding ; ubiquinol-cytochrome-c reductase activity ; respiratory electron transport chain" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MEQAPNMAEPRGPVDHGVQIRFITEPVSGAEMGTLRRGGRRPAKDARASTYGVAVRVQGIAGQPFVVLNSGEKGGDSFGVQIKGANDQEASGALGSDFELPENPYSQVKGFPAPSQSSTSDEEPGAYWNGKLLRSQSQASLAGPGPMDPSNRSTSMLELAPKVASPGSTIDTAPLSSVDSLINKFDSQLGGQSRGRTGRRTRMLPPEQRKRSKSLDSRLPRDTLEERERQSTNHWTPSTKYDNHVGSSKQPSQSQSPSPPSGFSRSRQTQDWVLQSFEEPRGRAQDPTMLQFKSTPDLLRDQQEAAPPGSVDHMKATIYGILREGSSESETSVRRKVSLVLEKMQPLVMISSGSTKAVAGQGELTRKVEELQRKLDEEVKRRQKLEPSRVGLERQLEEKTEECSRLQELLERRKGEAQQSNKELQNMKRLLDQGEGLRHGLEAQVMELQNKLKQVQGPEPAKEVLLKDLLETRELLEEVLEGKQRVEEQLRLRERELTALKGALKEEVASRDQEVEHVRQQYQRDTEQLRRSMQDATQDHAVLEAERQKMSALVRGLQRELEETSEETGHWQSMFQKNKEDLRATKQELLQLRMEKEEMEEELGEKIEVLQRELEQARASAGDTRQVEVLKKELLQTQEELKELQAERQSQEVAGRHRDRELEKQLAVLRVEADRGRELEEQNLQLQKTLQQLRQDCEEASKAKMVAEAEAAVLGQRRAAVETTLRETQEENDEFRRRILGLEQQLKETRGLVDGGEAVEARLRDKLQRLEAEKQQLEEALNASQEEEGSLAAAKRALEARLEEAQRGLARLGQEQQTLNRALEEEGKQREVLRRGKAELEEQKHLLDRTVDRLNKELEKIGEDSKQALQQLQAQLDDYKEKARREVADAQRQAKDWASEAEKTSGGLSRLQDEIQRLRQALQASQAERDTARLDKELLAQRLQGLEQEAENKKRSQDDRARQLKGLEEKVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLRTELLQERSARQDLECDKISLERQNKDLKTRLASSEGFQKPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERKVKELSIQIEDERQHVNDQKDQLSLRVKALKRQVDEAEEEIERLDGLRKKAQRELEEQHEVNEQLQARIKSLEKDSWRKASRSAAESALKHEGLSSDEEFDSVYDPSSIASLLTESNLQTSSC", - "output": "bicellular tight junction ; myosin complex" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "GIPCAESCVYIPCTVTALLGCSCSDKVCYN", - "output": "cytolysis in another organism ; defense response" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MASNNVAQFAAELKMPAGVLLEQLQAAGVTKASEDDSLSETDKARLLDHLRKSHGSTDADKRKITLTKRHTSEIKQSDATGKARTIQVEVRKKRTFVRRDETSAENGDASNHVAEAEVDDLELQRREEEARHEAELLEKQAQELKARQEQLEREEAERQAREAAAEVERRRAEEEAAKKRAAAAAEAAAREQQTQASKPAQAAQPAAAKAEPVAAKAAEPVVARQSEQDDERAAAERAAQREAAKKAEDAARQAAEKARAEQEEIAKRRAAAEAEARAIREMMNTPRKAQVKAPEPAPKPAEPAKAAEAKGTLHKPARPAGEAPARPAAKKPAAAAPAATTTPSAGDKKKPGGGKGGWQDDAAKRRGIKTRGDTSGGVDRGWRGGPKGRGKHQDQNTTFQAPTEPIVREVHVPETITVADLAHKMAVKASEVIKSMMKLGQMVTINQMLDQETAMIIVEELGHHAVAAKLDDPEAMLVEGEVSDAESLPRPPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETPRGVITFLDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAGGVPLVVAINKIDKPDANPERVKQELVAEGVVPEEYGGDSPFVSVSAKTGAGIDDLLENVLLQAEVLELKAPVEAPAKGLVIEAKLDKGKGPVATILVQSGTLNRGDVVLAGSAYGRVRAMLDETGKPTKSAGPSIPVEIQGLSEVPQAGEEVIVMPDERKAREVALFRQGKFRDVKLAKQQAAKLENMLEQMGEGEVQYMPLIVKADVQGSQEALVQSLLKLSTDEVRVQIVHGAVGGISESDVNLATASKAVIIGFNTRADAQARKLAEANGVDIRYYNIIYDAVDDVKAAMSGMLAPEKREVVTGTVEVRQVFKVPKIGAVAGCMVTDGFVKRSSSVRVLRNNVVIFTGELDSLKRFKDDVKEVRQGFECGMSIKNFNDIVEGDQFEVFEVTEVARSL", - "output": "cytoplasm ; GTP binding ; GTPase activity ; translation initiation factor activity" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MSSLLLFNDKSRALQADIVAVQSQVVYGSVGNSIAVPAIKQNGLNVFAVPTVLLSNTPHYDTFYGGAIPDEWFSGYLRALQEHDALRQLRAVTTGYMGTASQIKILAEWLTALRKDHPDLLIMVDPVIGDIDSGIYVKPDLPEAYRQYLLPLAQGITPNIFELEILTGKNCRDLDSAIAAAKSLLSDTLKWVVITSASGNEENQEMQVVVVSADSVNVISHSRVKTDLKGTGDLFCAQLISGLLKGKALNDAVHRAGLRVLEVMRYTQQHESDELILPPLAEA", - "output": "ATP binding ; magnesium ion binding ; pyridoxal kinase activity ; zinc ion binding ; phosphorylation ; pyridoxal 5'-phosphate salvage" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MQFDNIDSALMALKNGETIIVVDDENRENEGDLVAVTEWMNDNTINFMAKEARGLICAPVSKDIAQRLDLVQMVDDNSDIFGTQFTVSIDHVDTTTGISAYERTLTAKKLIDPSSEAKDFNRPGHLFPLVAQDKGVLARNGHTEAAVDLAKLTGAKPAGVICEIMNDDGTMAKGQDLQKFKEKHQLKMITIDDLIEYRKKLEPEIEFKAKVKMPTDFGTFDMYGFKATYTDEEIVVLTKGAIRQHENVRLHSACLTGDIFHSQRCDCGAQLESSMKYINEHGGMIIYLPQEGRGIGLLNKLRAYELIEQGYDTVTANLALGFDEDLRDYHIAAQILKYFNIEHINLLSNNPSKFEGLKQYGIDIAERIEVIVPETVHNHDYMETKKIKMGHLI", - "output": "3,4-dihydroxy-2-butanone-4-phosphate synthase activity ; GTP binding ; GTP cyclohydrolase II activity ; magnesium ion binding ; manganese ion binding ; zinc ion binding ; riboflavin biosynthetic process" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MSLSERQKEEINRAIAEYMQNNGYSESFSVFLKESSLSENDIKPLGGILEKKWTTVLRLQRKVNDLESKLQESQREINHGAPTRDKRQAADWIPRPPETQKLTGHRLPITRVIFHPLWTIMASCSEDATIKVWDYETGQLERTLKGHTDAVNDIAIDAAGKQLVSCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSVTFLPTGDFVLSASRDHTIKQWDISTGYCVYTFRGHNDWVRMIRISNDGTLFASASLDQTVTVWSFATKSAKLVLRDHEHAVECVEWAPDTAYTNVTGQQPEGNSTHILFSGSRDRSIKAWNINTGDVLFTLLAHENWVRGLAFHPKGKYLISVADDKTLRVWELSAQRCMKAIEAHEHFVSTVAFHQTSPFVITGSVDMSCKVWECR", - "output": "aster ; axon cytoplasm ; cell cortex ; cytoplasm ; cytoplasmic dynein complex ; cytoplasmic microtubule ; kinetochore ; microtubule ; microtubule associated complex ; microtubule organizing center ; neuron projection ; neuronal cell body ; nuclear envelope ; perinuclear region of cytoplasm ; synapse ; dynein complex binding ; microtubule plus-end binding ; brain morphogenesis ; cell division ; chiasma assembly ; embryo development ending in birth or egg hatching ; engulfment of apoptotic cell ; establishment of mitotic spindle orientation ; germ cell development ; locomotion ; maintenance of centrosome location ; microtubule organizing center organization ; microtubule sliding ; microtubule-based movement ; mitotic centrosome separation ; nuclear migration ; nuclear migration along microfilament ; oogenesis ; pronuclear migration ; retrograde axonal transport ; spindle assembly ; synaptic transmission, GABAergic ; synaptic vesicle transport ; vesicle transport along microtubule" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MVDQEQFDISNVLIEALPYIKKFHNKKIMIKYGGHAMIDENAMSSTARDTVLLKYVGMQPIVVHGGGPEISRSMDKMGKEPKFIGGLRVTDKETMEIVKMVLVGKINTEIVSKLGFHGGKSVGISGKDSYLVEASRKGLTKVKHENGEVLEVDLGYVGKIDRVNKQLVDDLTNNNYIPVISPLGIDDDGNTLNLNADTVAGSIASEVNAEKLIVLTDVPGILTDPDDPESMIRRIRTDELKELIKDGIITGGMIPKVETCINAVENGVKTAHILDGRLNHSILLEIFTKHGIGTMVRE", - "output": "cytoplasm ; acetylglutamate kinase activity ; ATP binding ; arginine biosynthetic process via ornithine ; phosphorylation" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MLLVIGLGNPGKEYQYTRHNVGFIAIEKIANQYNSSFSTKKKFNCEIAETISDRQKIIFIKPTTYMNLSGKSVISVKTYYNIYPAKIFVIHDDIDLETGRIKFKTGGGNGGHNGLKSIDGVIGNNYNRIRIGVGRPQNNQDVADYVLNHFSKPEYKTVMQAIDRITSNFGLILENKLEEFKN", - "output": "cytoplasm ; aminoacyl-tRNA hydrolase activity ; translation" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MSRLFKITALVPSLSRTRTQRELQNTYFTKLVPYENWFREQQRIQKAGGKIIKVELATGKQGTNAGLQ", - "output": "phycobilisome ; plasma membrane-derived thylakoid membrane ; photosynthesis" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MVVATTIALYASPASTVCSTAHQINAHISCDLDLNSRSSSASSSTSSPTIGGLSLLFSGASVKSSSSSSSSHPSVGEELASIRHDRSEDRTLSGSFCYSPSKFIGSSYLKRDHQSPVSVLHGPISSGNSPPMRISRDRNLDGGSALRVGSSRLFNGFVRKAIGSCVDYDTDSVLVDEQLPFTMDDGFEGERRQPYARDLLRRAQLKHKIFEDESVIKAFYEAEKAHRGQMRATGDPYLQHCVETAMLLADIGANSTVVVAGILHDTLDDSFMSYDYILRTFGSGVADLVEGVSKLSQLSKLARENNTACKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLYALPPVKRQRFAKETLEIFAPLANRLGISSWKVKLENLCFKHLHPDQHHEMSDMLEDSFDEAMITSAIEKLEQALKKEGISYHVVSGRHKSLYSIYCKMLKKKLTMDEIHDIHGLRLIVDNEKDCYKALGVVHKLWSEVPGKLKDYISHPKFNGYQSLHTVVMGDGTIPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCKHSSFVLQMVEWARWVVTWHFETMSKDGSSICSSEPLCSFPSHAEDCPFSYKPSGNQEGPVYVIVIENEKMTVQEFPENSTVSDLLRRAGPGSSRWSMYSIPAKEELRPRLNQTPVSDLKCKLKMGDVVELTPAIPDKSLTEYREEIQRMYDRGLAFSRPHRAATGTMVGWGS", - "output": "chloroplast ; ATP binding ; GTP binding ; GTP diphosphokinase activity ; kinase activity ; guanosine tetraphosphate biosynthetic process ; leaf senescence ; phosphorylation ; photosynthesis" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MRAELAVYFIAGTQDIVRGTLPSVLEEALKAGITCFQYREKGAGALQTASERKEMALECQQLCAKYQVPFIINDDVALALEIGADGIHVGQNDEEIRQVIASCAGKMKIGLSVHSVSEAEEAERLGSVDYIGVGPIFPTISKADAEPVSGTAILEEIRRAGIKLPIVGIGGINETNSAEVLTAGADGVSVISAITRSEDCQSVIKQLKNPGSPS", - "output": "magnesium ion binding ; thiamine-phosphate diphosphorylase activity ; thiamine biosynthetic process ; thiamine diphosphate biosynthetic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MAPKAEKKPASKAPAEKKPAAKKTATSGTKKRSKTRKETYSSYIYKVLKQTHPDTGISQKAMSIMNSFVNDIFERIAGEASKLAAYNKKSTISAREIQTAVRLILPGELAKHAVSEGTRAVTKYSSAAN", - "output": "nucleosome ; nucleus ; DNA binding ; protein heterodimerization activity ; structural constituent of chromatin" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MKLIFLLLLFGVSPIVCQDFEDGVFLAKITSIDEHDARKIGRRFGFEAQWKLQSYTDVYVGRRLRRRKRGIEDEIVAEMMLSQQVQFIEKLQGFRRYKRAPMTNKGYPVHVWNLTPSLYIREAWEDGFNASRVTVAVVDDGVDIKHVDLKSAFSPRVSFDFVRFGDLPTPKNSKEFEHGTQCAGLVAMEGQQCGLGVGHGATLGAIKLLGQDFLNDALEGDALAFQKDLIDIYSVSWGPKDDGKSAEKPAKFTEEAIKNGALHGRNGKGNIFVWASGNGGVNGDNCAYDGYVSNEYTLSFGVIDASGAPAAYGEGCSSVLAAVSGGDAMIQTTGLESTCSSISGSSASAAIASGIISLVLDANPTLSQRDIQHLIARTSNASAIRDVELYENSAGLNFHPKVGFGLLNAQKLVVMAATWENVAPQVTCEKMNLANGIIDNSDCDVTKVERVIVSGSIIHPHRGQVQIRLESPRGTISELLPLRPKDTSRDLLDWNFVSVNFFGENSRGIWKLHVTSEEDDVDFRVEMKMFKVVGTMS", - "output": "extracellular space ; membrane ; neuron projection ; serine-type endopeptidase activity ; defecation ; lipid transport involved in lipid storage ; locomotion ; neuropeptide processing ; positive regulation of defecation ; positive regulation of defecation rhythm ; positive regulation of intestinal lipid absorption ; positive regulation of locomotion ; positive regulation of synaptic assembly at neuromuscular junction ; positive regulation of triglyceride transport ; protein localization to synapse ; protein processing ; regulation of defecation" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MSSKLVLVLNCGSSSLKFAIIDATNGEEHISGLAECFHLPEARIKWKVDGGKQEAALGAGAAHSEALNFIVNTILAQKPALSAQLTAIGHRIVHGGEKFTSSVIVTDDVIQGIKDSIPFAPLHNPAHLIGIAEALKSFPNLADKNVAVFDTAFHQTMPEESYLYALPYSLYKDHGIRRYGAHGTSHFYVSQEAAKVLNKPLEELNVITCHLGNGGSVTAVRNGKCVDTSMGLTPLEGLVMGTRSGDLDPAIIFHLHDAMGMSVDQINTLLTKESGLLGLTEVTSDCRYVEDNYATKADAKRAMDVFCHRLAKYIGSYTALMDGRLDAVVFTGGIGENAAMVRELTLDKLGLLGFEIDHERNMAARFGKSGTITKDSSRLALVIPTNEELVIAQDAARLTA", - "output": "cytoplasm ; acetate kinase activity ; ATP binding ; magnesium ion binding ; acetyl-CoA biosynthetic process ; organic acid metabolic process ; phosphorylation" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MTAPSQVLKIRRPDDWHVHLRDGDMLKTVVPYTSEIYGRAIVMPNLASPITTVDAAIAYRQRILDAVPAGHDFTPLMTCYLTDSLDADELERGFHEGVFTAAKLYPANATTNSSHGVTSVDAIMPVLERMEKLGMPLLVHGEVTHADVDIFDREARFIDTVMEPLRQRLTALKVVFEHITTKDAAQYVRDGNDYLAATITPQHLMFNRNDMLVGGIRPHLYCLPILKRNIHQQALRELVASGFTRAFLGTDSAPHSRHRKETSCGCAGCFNAPSALGSYAAVFEEMNALAHFEAFCSLNGPQFYGLPVNTGWVELVRDEQQIPENIALADDSLVPFLAGETVRWSVKK", - "output": "dihydroorotase activity ; zinc ion binding ; 'de novo' UMP biosynthetic process ; pyrimidine nucleobase biosynthetic process" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MGYIPPPGDNDDNGKKSNKKTQNTSKPISSDSTPDGTTITIINPMSLIPRNPSFGLIWGPLTPASDNRPAMYTMVALQIAIGVRFFRYARTHLRRHPVPQAQFHAPPGLGVNSMISTTANQTYSAPPQQFLRRSKGDVFKSILAITTGSLLIFGSGLEIARMMLPYDPWYDEAQFYRKQAVRNGDKPNFWFGAYQYYQPMTYKEWHSKVSKWIDSVEKEIKVDETTFVIDKDGKARGGIGPAGVGYVNGAGQQSGAASAAAAVAKPLFQIRNRAKYQQIHAKLYNANETRMRELLANELNDTNVNELNKAERLDKILEGKSDLVNPNFNKPSISLGNHPMESDDEFEMVWLNFEPWDELKMETDYDIRLIPRYASVEELEQVDEGELFVVKKEELGETDNVVNESS", - "output": "mitochondrial inner membrane" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MTAAAESERLRPPRVRAVRIWLTVVAALIAVMVLVGGATRLTESGLSIVEWKPVTGTLPPLTDAQWHAAFEGYKTIPQYRELNAGMTLYEFKTIFWWEWSHRLLGRVIGIAYLLPFLWFLWRGAIGPQWKRALWGIFALGALQGAVGWWMVASGLSQRTEVSQVRLAVHLTLALIIYAAIVWTLRRLADKPPIPAAARLKVTAIALLALTLLQLFLGALVAGLRAGRVFNTWPLIDGALIPSAERLWFEQPWWKNLFDNHLTVQFDHRMMAYALWALAAWHAIDAVRSRAGGAASGALWLFAALSLQAVLGILTVLHATPIGLALAHQAVGIVVLTLAVLQVERLTAPRLKALPRAMPVPVGQPG", - "output": "plasma membrane ; metal ion binding ; oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor ; heme A biosynthetic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MKVILLFVLAVFTVFVSSRGIPLEEQSQFLEFQDKFNKKYSHEEYLERFEIFKSNLGKIEELNLIAINHKADTKFGVNKFADLSSDEFKNYYLNNKEAIFTDDLPVADYLDDEFINSIPTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHECMEYEGEQACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAETGTQCNFNSANIGAKISNFTMIPKNETVMAGYIVSTGPLAIAADAVEWQFYIGGVFDIPCNPNSLDHGILIVGYSAKNTIFRKNMPYWIVKNSWGADWGEQGYIYLRRGKNTCGVSNFVSTSII", - "output": "extracellular space ; lysosome ; cysteine-type endopeptidase activity ; hyperosmotic response ; proteolysis involved in protein catabolic process" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "SIMKMDGSQQEENLDVISTGSLGVDLALGVGGLPRGRVVEIFGPESSGKTTLCLEAIAQCQKNGGICAFIDAEHAFDPIYARKLGVKVEELYLSQPDTGEQALEICDTLVRSGGIDMVVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTGHIKRTNTLVVFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGQIKKGDDVIGNETKVKVIKNKVAPPFRQAEFDILYGEGISWEGELIDLGVKHDIVEKSGAWYSYNGAK", - "output": "cytoplasm ; ATP binding ; ATP-dependent DNA damage sensor activity ; single-stranded DNA binding ; DNA recombination ; DNA repair ; SOS response" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MTNMMKALVKAKPEEGLWMERVPLPEIGPNDVLIKVRKAAICGTDVHIWNWDEWARKTVPVPLVTGHEFVGEVVDVGSAVTEYRIGQRVSGEGHIVCGHCRNCRAGRGHLCRNTLGVGVHRPGAFAEYISLPQHNVVAIPDDVPDEIAAIFDPLGNAVHTALSFDLVGEDVLVTGAGPIGIMGALVAQCVGARKVVITDINPGRLALAKKLGVRHVVNAREEKLTDVMRKLGMTEGFDVGLEMSGSASAFRDMIDVMNNGGKIAILGIAPTGFEIDWNKVIFKMLHLKGIYGREMFETWYKMIALVQGPLDISGLITHRISADDYREGFAAMRSGEAGKVVMDW", - "output": "cytoplasm ; L-threonine 3-dehydrogenase activity ; zinc ion binding ; L-threonine catabolic process to glycine" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "GLLDSIKGMAISAGKGALQNLLKVASCKLDKTC", - "output": "extracellular region ; defense response to bacterium ; defense response to fungus ; killing of cells of another organism" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MPMERFLKDFTIPEKIEFLKSQDDGSYGKFTIYPFERGFGVTIGNTLRRVLLSSIEGYAITAMRVQSNNKDSSSKVVSSEFDLIPGVSEDTLEVIANIKNIHLKLREGEQRKTISFSVSGKDTNVLKASHFERDGVEVFNKDLVIATLSHDVNLDFEFQINYGRGYVSSEQNSKYLEEVNVIALDSIFSPIEKVSYSVEDTRVGQRSDYDKLVMEIWTTGVISAKDAIKKAASIVREFLFPLVDFEDSVSVSFDKSKSESSNLLDMSIEKLDLSVRSLNCLAKENVRTLGELISKNAEELSKARNFGKKSLEEIIEKLGSYQLFLGMSKEDALSVLSKNVKISE", - "output": "cytoplasm ; DNA-directed RNA polymerase complex ; DNA binding ; DNA-directed 5'-3' RNA polymerase activity ; protein dimerization activity ; DNA-templated transcription" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MVAGMLMPLDQLRAIYEVLFREGVMVAKKDRRPRSLHPHVPGVTNLQVMRAMTSLKARGLVRETFAWCHFYWYLTNEGIDHLRQYLHLPPEIVPASLQRVRRPVAMVMPARRRSPHVQTMQGPLGCPPKRGPLPAEDPAREERQVYRRKEREEGAPETPVVSATIVGTLARPGPEPTPATDERDRVQKKTSTKWVNKHLIKAQRHISDLYEDLRDGHNLISLLEVLSGDSLPREKGRMRFHKLQNVQIALDYLRHRQVKLVNIRNDDIADGNPKLTLGLIWTIILHFKISDIQVSGQSEDMTAKEKLLLWSQRMVEGYQGLRCDNFTTSWRDGRLFNAIIHRHKPMLIDMNKVYRQTNLENLDQAFSVAERDLGVTRLLDPEDVDVPQPDEKSIITYVSSLYDAMPRVPGAQDGVRANELQLRWQEYRELVLLLLQWIRHHTAAFEERKFPSSFEEIEILWCQFLKFKETELPAKEADKNRSKGIYQSLEGAVQAGQLKIPPGYHPLDVEKEWGKLHVAILEREKQLRSEFERLECLQRIVSKLQMEAGLCEEQLYQADSLLQSDIRLLASGKAAQRAGEVERDLDKADGMIRLLFNDVQTLKDGRHPQGEQMYRRVYRLHERLVAIRTEYNLRLKAGVGAPVTQVTLQSTQRRPELEDSTLRYLHDLLAWVEENQRRIDGAEWGVDLPSVEAQLGSHRGMHQSIEEFRAKIERARNDESQLSPATRGAYRDCLGRLDLQYAKLLNSSKARLRSLESLHGFVAAATKELMWLNEKEEEEVGFDWSDRNTNMAAKKESYSALMRELEMKEKKIKEIQNTGDRLLREDHPARPTVESFQAALQTQWSWMLQLCCCIEAHLKENTAYFQFFSDVREAEEQLQKLQETLRRKYSCDRSITVTRLEDLLQDAQDEKEQLNEYKGHLSGLAKRAKAIVQLKPRNPAHPVRGHVPLLAVCDYKQVEVTVHKGDQCQLVGPAQPFHWKVLSSSGSEAAVPSVCFLVPPPNQEAQEAVARLEAQHQALVTLWHQLHVDMKSLLAWQSLNRDIQLIRSWSLVTFRTLKPEEQRQALRNLELHYQAFLRDSQDAGGFGPEDRLVAEREYGSCSRHYQQLLQSLEQGEQEESRCQRCISELKDIRLQLEACETRTVHRLRLPLDKDPARECAQRIAEQQKAQAEVEGLGKGVARLSAEAEKVLALPEPSPAAPTLRSELELTLGKLEQVRSLSAIYLEKLKTISLVIRSTQGAEEVLKTHEEHLKEAQAVPATLQELEVTKASLKKLRAQAEAQQPVFNTLRDELRGAQEVGERLQQRHGERDVEVERWRERVTQLLERWQAVLAQTDVRQRELEQLGRQLRYYRESADPLSSWLQDAKSRQEQIQAVPIANSQAAREQLRQEKALLEEIERHGEKVEECQKFAKQYINAIKDYELQLITYKAQLEPVASPAKKPKVQSGSESVIQEYVDLRTRYSELTTLTSQYIKFISETLRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEARELQRRMQEEVTRREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQLETTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALRVKAEAEAAREKQRALQALDELKLQAEEAERWLCQAEAERARQVQVALETAQRSAEVELQSKRPSFAEKTAQLERTLQEEHVTVTQLREEAERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQADAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQLTEGTAQQRLAAEQELIRLRAETEQGEHQRQLLEEELARLQHEATAATQKRQELEAELAKVRAEMEVLLASKARAEEESRSTSEKSKQRLEAEAGRFRELAEEAARLRALAEEARRHRELAEEDAARQRAEADGVLTEKLAAISEATRLKTEAEIALKEKEAENERLRRLAEDEAFQRRRLEEQAAQHKADIEERLAQLRKASESELERQKGLVEDTLRQRRQVEEEIMALKASFEKAAAGKAELELELGRIRSNAEDTMRSKELAEQEAARQRQLAAEEEQRRREAEERVQRSLAAEEEAARQRKVALEEVERLKAKVEEARRLRERAEQESARQLQLAQEAAQKRLQAEEKAHAFVVQQREEELQQTLQQEQNMLERLRSEAEAARRAAEEAEEAREQAEREAAQSRKQVEEAERLKQSAEEQAQAQAQAQAAAEKLRKEAEQEAARRAQAEQAALKQKQAADAEMEKHKKFAEQTLRQKAQVEQELTTLRLQLEETDHQKSILDEELQRLKAEVTEAARQRSQVEEELFSVRVQMEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAARLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQADKEQMAQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTELATQEKVTLVQTLEIQRQQSDQDAERLREAIAELEREKEKLKQEAKLLQLKSEEMQTVQQEQILQETQALQKSFLSEKDSLLQRERFIEQEKAKLEQLFQDEVAKAKQLQEEQQRQQQQMEQEKQELVASMEEARRRQREAEEGVRRKQEELQRLEQQRQQQEKLLAEENQRLRERLQRLEEEHRAALAHSEEIATSQAAATKALPNGRDALDGPSMEAEPEYTFEGLRQKVPAQQLQEAGILSMEELQRLTQGHTTVAELTQREDVRHYLKGGSSIAGLLLKPTNEKLSVYTALQRQLLSPGTALILLEAQAASGFLLDPVRNRRLTVNEAVKEGVVGPELHHKLLSAERAVTGYKDPYTGEQISLFQAMKKDLIVRDHGIRLLEAQIATGGIIDPVHSHRVPVDVAYQRGYFDEEMNRVLADPSDDTKGFFDPNTHENLTYLQLLERCVEDPETGLRLLPLTDKAAKGGELVYTDTEARDVFEKATVSAPFGKFQGKTVTIWEIINSEYFTAEQRRDLLRQFRTGRITVEKIIKIVITVVEEHERKGQLCFEGLRALVPAAELLDSGVISHEVYQQLQRGERSVREVAEADEVRQALRGTSVIAGVWLEEAGQKLSIYEALRRDLLQPEVAVALLEAQAGTGHIIDPATSARLTVDEAVRAGLVGPEMHEKLLSAEKAVTGYRDPYSGQSVSLFQALKKGLIPREQGLRLLDAQLSTGGIVDPSKSHRVPLDVAYARGYLDKETNRALTSPRDDARVYLDPSTREPVTYSQLQQRCRSDQLTGLSLLPLSEKAVRARQEEVYSELQARETLEKAKVEVPVGGFKGRALTVWELISSEYFTEEQRQELLRQFRTGKVTVEKVIKILITIVEEVETQRQERLSFSGLRAPVPASELLASKILSRTQFEQLKDGKTSVKDLSEVGSVRTLLQGSGCLAGIYLEDSKEKVTIYEAMRRGLLRASTATLLLEAQAATGFLVDPVRNQRLYVHEAVKAGVVGPELHEKLLSAEKAVTGYKDPYSGSTISLFQAMKKGLVLRDHAIRLLEAQIATGGIIDPVHSHRLPVDVAYQRGYFDEEMNRVLADPSDDTKGFFDPNTHENLTYLQLLERCVEDPETGLRLLPLRGAEKTEVVETTQVYTEEETRRAFEETQIDIPGGGSHGGSSMSLWEVMQSDMIPEDQRARLMADFQAGRVTKERMIIIIIEIIEKTEIIRQQNLASYDYVRRRLTAEDLYEARIISLETYNLFREGTKSLREVLEMESAWRYLYGTGSVAGVYLPGSRQTLTIYQALKKGLLSAEVARLLLEAQAATGFLLDPVKGERLTVDEAVRKGLVGPELHDRLLSAERAVTGYRDPYTEQPISLFQAMKKELIPAEEALRLLDAQLATGGIVDPRLGFHLPLEVAYQRGYLNKDTHDQLSEPSEVRSYVDPSTDERLSYTQLLKRCRRDDNSGQMLLPLSDARKLTFRGLRKQITVEELVRSQVMDEATALQLQEGLTSIEEVTKNLQKFLEGTSCIAGVFVDATKERLSVYQAMKKGIIRPGTAFELLEAQAATGYVIDPIKGLKLTVEEAVRMGIVGPEFKDKLLSAERAVTGYKDPYSGKLISLFQAMKKGLILKDHGIRLLEAQIATGGIIDPEESHRLPVEVAYKRGLFDEEMNEILTDPSDDTKGFFDPNTEENLTYLQLMERCITDPQTGLCLLPLKEKKRERKTSSKSSVRKRRVVIVDPETGKEMSVYEAYRKGLIDHQTYLELSEQECEWEEITISSSDGVVKSMIIDRRSGRQYDIGDAITKNLIDRSALDQYRAGTLSITEFADMLSGNAGGFRSRSSSVGSSSSYPISSAVPRTQLASWSDPTEETGPVAGILDTETLEKVSITEAMHRNLVDNITGQRLLEAQACTGGIIDPSTGERFPVTEAVNKGLVDKIMVDRINLAQKAFCGFEDPRTKTKMSAAQALKKGWLYYEAGQRFLEVQYLTGGLIEPDTPGRVSLDEALQRGTVDARTAQKLRDVSAYSKYLTCPKTKLKISYKDALDRSMVEEGTGLRLLEAAAQSSKGYYSPYSVSGSGSTAGSRTGSRTGSRAGSRRGSFDATGSGFSMTFSSSSYSSSGYGRRYASGPSASLGGPESAVA", - "output": "apical plasma membrane ; axon ; basal plasma membrane ; brush border ; cell periphery ; contractile fiber ; costamere ; cytoplasm ; cytoskeleton ; dendrite ; focal adhesion ; hemidesmosome ; mitochondrial outer membrane ; myelin sheath ; myofibril ; perinuclear region of cytoplasm ; sarcolemma ; sarcoplasm ; Z disc ; actin binding ; actin filament binding ; ankyrin binding ; cytoskeletal protein binding ; dystroglycan binding ; protein self-association ; structural constituent of cytoskeleton ; structural constituent of muscle ; actin cytoskeleton organization ; actin cytoskeleton reorganization ; actin filament organization ; actomyosin contractile ring assembly actin filament organization ; adherens junction organization ; cardiac muscle cell development ; cell morphogenesis ; cell motility ; cellular response to extracellular stimulus ; cellular response to fluid shear stress ; cellular response to hydrostatic pressure ; cellular response to mechanical stimulus ; epithelial cell differentiation ; establishment of skin barrier ; female pregnancy ; fibroblast migration ; gene expression ; hemidesmosome assembly ; intermediate filament cytoskeleton organization ; intermediate filament organization ; keratinocyte development ; keratinocyte differentiation ; leukocyte migration involved in immune response ; mitochondrion morphogenesis ; mitochondrion organization ; multicellular organism growth ; myelination in peripheral nervous system ; myoblast differentiation ; negative regulation of protein kinase activity ; nucleus organization ; peripheral nervous system myelin maintenance ; protein localization ; protein-containing complex organization ; regulation of ATP citrate synthase activity ; regulation of vascular permeability ; respiratory electron transport chain ; response to food ; response to nutrient ; sarcomere organization ; skeletal muscle fiber development ; skeletal muscle tissue development ; skeletal myofibril assembly ; skin development ; T cell chemotaxis ; tight junction organization ; transmission of nerve impulse ; wound healing" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MSLYDDKYLAIANDILENGYFDNNRTGVKTYKLPHQIMQFNLEKEFPILTTKFVAFKTAVKELLWIFKDQSNSVKELQSQNVKIWDEWMMEDGTIGTSYGWIVKKFDQIDKLIDALKNNPQDRRMMINLWQIPYLDSAPLYPCCFLTMWDVTDGKLNCMLVQRSGDWGLGVPFNTSQYAVLVHLLAQVTGLKPGLFTHVINNAHIYENQVDGLKLQLTRKNDAYNAPKLWINPEITNFYDFTPDDIKLEDYKHHESIKMDVSV", - "output": "cytoplasm ; thymidylate synthase activity ; dTMP biosynthetic process ; dTTP biosynthetic process ; methylation" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MLSVEMISRQNRCHYVYKGGNMMRRILHIVLITALMFLNVMYTFEAVKAAEPQQPISIEKAIQQKEGQALVEGYAVGQAVSPQHYKLTSPFSNDYNVALADRKNKTSPEHILPVQIPSAFRSQFGLQTNPLLLGKKITVQGKLENYFNTTGLKNVQSMNVTDDTKTPPAEQQVTINEARGRLNEEVTIKGIITADQNAIGGGKLSTFLQDETGGINIYSPSPEQFPELKEGMDVTVTGKITSYQGLKEIVPNSSGIKINQSNQSLPAPKHLTINELINGSLGDQYEGRLVKLTAFVSSIPSSPAGGGYNVTMIDDDHHAMTLRVMNETGVINELDEGKWYEFTGVLSRYQTFQLLPRKSADLKLLEEQPAPPSAEGEYEGIVDRVVDGDTIHLKSPVLGTTKIRFVNVDAPETYHTPKNDADENQLRFGKKASDYLKTVLSPGDKITVKVGSEAKDSYGRLLGQVITESGSNVNLELVKNGYAPTYFIWPVDNEEDYQQFQAAVAAAKKDQKGIWNENDPLMEMPFEFRAREQGKGLTRYVGDSSNKTYVQPADWKKIAVENRIFFASASEAESAGYKKRQTAPQEHVPLRILSMNDLHGKIDQQYELDLDGNGTVDGTFGRMDYAAAYLKEKKAEKKNSLIVHAGDMIGGSSPVSSLLQDEPTVELMEDIGFDVGTVGNHEFDEGTDELLRILNGGDHPKGTSGYDGQNFPLVCANCKMKSTGEPFLPAYDIINVEGVPVAFIGVVTQSAAGMVMPEGIKNIEFTDEATAVNKAAEELKKKGVKAIAVLAHMSAEQNGNAITGESADLANKTDSEIDVIFAAHNHQVVNGEVNGKLIVQAFEYGKAIGVVDVEIDKTTKDIVKKSAEIVYVDQSKIEPDVSASAILKKYETIAEPIISEVVGEAAVDMEGGYSNDGDTPLGNLIADGMRAAMKTDFALMNGGGIREALKKGPITWGDLYNIQPFGNVLTKLEIKGKDLREIINAQISPVFGPDYSISGFTYTWDKETGKAVDMKMADGTEIQPDATYTLTVNNFMATATGAKYQPIGLLGKNPVTGPEDLEATVEYVKSFDEPIAYTKEGRIKLAEASDIEDPVTEDPITEEPGDDPGTEDPIKEDPRPGEDLPDIKETPGTAPVHQLPPSAISRFNEIPINNTKTADTANSISTLPLQTETAESGSDHQLPDTSAGYYNFMVIGAAVTLSGTYLYVRRKRSASRT", - "output": "extracellular region ; outer membrane-bounded periplasmic space ; 5'-nucleotidase activity ; endonuclease activity ; metal ion binding ; nucleotide binding ; UDP-sugar diphosphatase activity ; nucleotide catabolic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MANPIKIGIGGPVGAGKTQLIEKVVKRLSKEMSIGVITNDIYTKEDEKILVNSGVLPESRIIGVETGGCPHTAIREDASMNFAAIDELLERHDDIELIFIESGGDNLAATFSPELVDFSIYIIDVAQGEKIPRKGGQGMIKSDFFVINKTDLAPYVGASLEQMAEDTKVFRGKRPFTFTNLKTDEGLDEVIDWIERDTLLKGLS", - "output": "cytoplasm ; GTP binding ; GTPase activity ; nickel cation binding ; nitrogen compound metabolic process" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MPSSGRALLDSPLDSGSLTSLDSSVFCSEGEGEPLALGDCFTVNVGGSRFVLSQQALSCFPHTRLGKLAVVVASYRRPGALAAVPSPLELCDDANPVDNEYFFDRSSQAFRYVLHYYRTGRLHVMEQLCALSFLQEIQYWGIDELSIDSCCRDRYFRRKELSETLDFKKDTEDQESQHESEQDFSQGPCPTVRQKLWNILEKPGSSTAARIFGVISIIFVVVSIINMALMSAELSWLDLQLLEILEYVCISWFTGEFVLRFLCVRDRCRFLRKVPNIIDLLAILPFYITLLVESLSGSQTTQELENVGRIVQVLRLLRALRMLKLGRHSTGLRSLGMTITQCYEEVGLLLLFLSVGISIFSTVEYFAEQSIPDTTFTSVPCAWWWATTSMTTVGYGDIRPDTTTGKIVAFMCILSGILVLALPIAIINDRFSACYFTLKLKEAAVRQREALKKLTKNIATDSYISVNLRDVYARSIMEMLRLKGRERASTRSSGGDDFWF", - "output": "intercellular bridge ; plasma membrane ; voltage-gated potassium channel complex ; ion channel inhibitor activity ; potassium channel regulator activity ; voltage-gated potassium channel activity ; potassium ion transmembrane transport ; potassium ion transport ; protein homooligomerization ; regulation of monoatomic ion transmembrane transport" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MNPIVVVHGGGAGPISKDRKERMHQGIVRAATVGYGILREGGSAVDAVEGAVVALEDDPEFNAGCGSVLNTDGEVEMDASIMDGKDLSVGAVSAVRCIANPIKLARLVMEKTPHCFLTDQGAAQFAAAMGVPEIPGEKLVTEKNKKRLEKEKHEKGAQKTDCEKNLGTVGAVALDFKGNVAYATSTGGIVNKMVGRVGDTPCVGAGGYADNDIGAISTTGHGESILKVNLARLTLFHIEQGKTVEEAADLSLGYMKSRVKGLGGLIVVSKTGDWVAKWTSTSMPWAAAKDGKLHFGIDPDDTAITDLP", - "output": "cytoplasm ; photoreceptor inner segment ; asparaginase activity ; beta-aspartyl-peptidase activity ; asparagine catabolic process via L-aspartate ; proteolysis" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MKTDRHKKILEVIDRYEVGTQEELAKILNDEGYNVTQATVSRDIRELNLSKVSVDGKRTRYATLTKDKPVASDKFLTVLKEGFVSMDMAQNILVIKTAPGMAMAVCAAIDALEWNEIVGSIAGDDTIMCAVRTVNDTLLVMNKIKKLIKNN", - "output": "cytoplasm ; arginine binding ; DNA binding ; DNA-binding transcription factor activity ; arginine biosynthetic process ; protein complex oligomerization" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "VSLREQWNEQARERQREISARKTEIEEARSSIQKELQAQYEAALAATQQLQSLXXRFXRFY", - "output": "gas vesicle ; gas vesicle shell ; membrane ; vacuole" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MALTSEQKKEILSSYGLHATDTGSPEAQIALLTKRIADLTEHLKVHKHDHHSRRGLLLLVGRRRRLIKYLSLIDVQRYRSLIERLGLRR", - "output": "cytoplasm ; ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MFSFEKNSLKNTDKEIFDAIELEVKRQHEHVELIASENYASPAVMEAQGSQLTNKYAEGYHGKRYYGGCEFVDIAEKLAIERAQQLFGVDYANVQPHSGSQANAAVYNAVLKPGDTVLGMDLGAGGHLTHGSKVNFSGKIYNSIQYGLDENGDIDYEQVAQLAKEHKPKMIIAGFSAFSGIINWQKFREIADSVDAVLMADIAHVAGLVAAGVYPNPFPYVDVATTTTHKTLRGPRGGLILCNNNPELAKKFQSAIFPGIQGGPLMHVIAAKAVAFKEALEPSFVDYQKQVLKNAKAMEKVLKQRGINIISGGTSNHLLLLDITNTGFSGKEAEAALGRANITVNKNSIPNDPRSPFVTSGLRIGSPAITTRGFKEKECELVANLLADVVFNCGDEKVENETAAKILDLCDKFPVYK", - "output": "cytoplasm ; glycine hydroxymethyltransferase activity ; pyridoxal phosphate binding ; glycine biosynthetic process from serine ; tetrahydrofolate interconversion" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MNQLYQRSFLRLMDFSMNEIMYILRLSHFLKQQKSNHTETQKLHKKNIVLIFENHSTRTRCAFEVAAFDQGARVTCLTPNISQIGHKESIKDTAKILGRMYHGIQYRGYNQDTINIFAQYSNVPVWNGLTEQFHPTQMLADLMTMQEQVPHKSFCKIKLAYVGDARNNIGNSLLEAASIIGFDLRLVSPREFWPQQELLTTCRKLTKLNKVNILLTENIQEGVKDVDFLYTDVWVSMGENEKVWTHRISLLSPYQVNQDMINYTGNSNVKFLHCLPALHNNETTIGKKIAHKHNLFNGLEVTNEIFESKHSIVFDQAENRLHTIKALMISTLLPNLYHKNITFHTKN", - "output": "cytoplasm ; amino acid binding ; ornithine carbamoyltransferase activity ; arginine deiminase pathway" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MAKKSKIVKNNKRRDIVARYAQRRAELKQIIQSPTSSYEQRLDAQRALSRQPRDASAVRLRNRDAIDGRPRGHLRKFGLSRVRVRELAHAGQLPGVRKASW", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MLGDGNEGISTIPGFNQIQFEGFCRFIDQGLTEELYKFPKIEDTDQEIEFQLFVETYQLVEPLIKERDAVYESLTYSSELYVSAGLIWKNSRDMQEQTFFIGNIPLMNSLGTSIVNGIYRIVINQILQSPGIYYRSELDHNGISVYTGTIISDWGGRSELEIDRKARIWARVSRKQKISILVLSSAMGLNLREILENVCYPEIFLSFLSDKERKKIGSKENAILEFYQQFACVGGDPVFSESLCKELQKKFFQQRCELGRIGRRNMNRRLNLDIPQNNTFLLPRDILAAADHLIGLKFGMGALDDMNHLKNKRIRSVADLLQDQFGLALVRLENVVRGTICGAIRHKLIPTPQNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHAKIGHWGSLESPFYEISERSTGVRMLYLSPGRDEYYMVAAGNSLALNRDIQEEQVVPARYRQEFLTIAWEQVHLRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSRSEKCIVGTGLERQAALDSGALAIAEREGRVVYTNTDKILLAGNGDILSIPLVIYQRSNKNTCMHQKLQVPRGKCIKKGQILADGAATVGGELALGKNVLVAYMPWEGYNSEDAVLISERLVYEDIYTSFHIRKYEIQTHVTSQGPEKVTNEIPHLEAHLLRNLDKNGIVMLGSWVETGDILVGKLTPQVVKESSYAPEDRLLRAILGIQVSTSKETCLKLLIGGRGRVIDVRWIQKRGGSSYNPETIRVYILQKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQDGRSVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA", - "output": "chloroplast ; DNA-directed RNA polymerase complex ; DNA binding ; DNA-directed 5'-3' RNA polymerase activity ; ribonucleoside binding ; DNA-templated transcription" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MTNELPEIGSPARTKAILNRYRLVAKKSLGQNFLSDLNILRNIVAAGDVNDHDNVIEIGPGIGALTEQIAKRAHKVVAFEIDENLLPVLDETLMDYKNVKIINEDILKANLPAVVADEFEADRPLKLVANLPYYITTPILMGVLQSTVRFEAIVVMMQAEVAERLVAEPGTKAYGSLSVIMQYRAHVEIAFNVPRTAFIPQPNVDSAIIRLTPREALPVNPYEDKALFSFVKGCFAHRRKSLWNNLQGIFGKQPEVRERIETVLNQTGISRQLRPERLTLLNFIELTNAFHNEGLM", - "output": "cytoplasm ; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity ; RNA binding" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "METQKDEAAQAKGAAASGSTREQTAEKGAKNKAAEATEGPTSEPSSSGPGRLKKTAMKLFGGKKGICTLPSFFGGGRSKGSGKGSSKKGLSKSKTHDGLSEAAHGPEDVVSEGTGFSLPLPELPCQFPSSQSAHGALETGSRCKTSVAGATEKAVAEKFPSMPKPKKGLKGFFSSIRRHRKSKVTGAEQSEPGAKGPERVRARPHEHVSSAPQVPCFEETFQAPRKENANPQDAPGPKVSPTPEPSPPATEKMACKDPEKPMEACASAHVQPKPAPEASSLEEPHSPETGEKVVAGEVNPPNGPVGDPLSLLFGDVTSLKSFDSLTGCGDIIAEQDMDSMTDSMASGGQRANRDGTKRSSCLVTYQGGGEEMALPDDDDEEEEEEEEVELEEEEEEVKEEEEDDDLEYLWETAQMYPRPNMNLGYHPTTSPGHHGYMLLDPVRSYPGLAPGELLTPQSDQQESAPNSDEGYYDSTTPGFEDDSGEALGLVRRDCLPRDSYSGDALYEFYEPDDSLENSPPGDDCLYDLHGRSSEMFDPFLNFEPFLSSRPPGAMETEEERLVTIQKQLLYWELRREQLEAQEARAREAHAREAHAREAYTREAYGREAYAREAHTWEAHGREARTREAQAREVRCRETQVRETQARQEKPVLEYQMRPLGPSVMGLAAGVSGTSQISHRGITSAFPTTASSEPDWRDFRPLEKRYEGTCSKKDQSTCLMQLFQSDAMFEPDMQEANFGGSPRRAYPTYSPPEDPEEEEVEKEGNATVSFSQALVEFTSNGNLFSSMSCSSDSDSSFTQNLPELPPMVTFDIADVERDGEGKCEENPEFHNDEDLAASLEAFELGYYHKHAFNNYHSRFYQGLPWGVSSLPRYLGLPGLHPRPPPAAMALNRRSRSLDTAETLEMELSNSHLVQGYLESDELQAQQEDSDEEDEEEEEGEWSRDSPLSLYTEPPGAYDWPAWAPCPLPVGPGPAWISPNQLDRPSSQSPYRQATCCIPPMTMSISLSVPESRAPGESGPQLARPSHLHLPMGPCYNLQPQASQSMRARPRDVLLPVDEPSCSSSSGGFSPSPLPQAKPVGITHGIPQLPRVRPEHPQPQPTHYGPSSLDLSKERAEQGASLATSYSSTAMNGNLAK", - "output": "cytosol ; intracellular membrane-bounded organelle ; nuclear body ; plasma membrane ; beta-catenin binding ; beta-catenin destruction complex binding ; phosphatidylinositol-4,5-bisphosphate binding ; adipose tissue development ; bone development ; mesenchymal cell differentiation involved in kidney development ; negative regulation of canonical Wnt signaling pathway ; positive regulation of canonical Wnt signaling pathway ; positive regulation of protein catabolic process ; positive regulation of protein ubiquitination ; regulation of canonical Wnt signaling pathway ; Wnt signaling pathway" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MSVEAVVKQVDGDALEAAIKGDKLLVCDFFATWCGPCKSLAPKLDAMAKENEKVIFVKLDVDECQDVAEKYRVTAMPTLIVFKNGCEIGHVVGANEAGIRELIQANA", - "output": "protein-disulfide reductase activity" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MPRSQRNDNFIDKTFTVVADILLKVLPTTRREKEAFTYYRDGMSAQAEGEYAEALQNYYEAMRLEVDAYDRSYILYNIGLIHTSNGEHAKALEYYYQALERNPYLPQALNNIAVIYHYRGEQAIESGNSRISNLLFDKAADYWKEAIRLAPTNYIEAQNWLKITNRLEEAI", - "output": "chloroplast thylakoid membrane ; photosynthesis" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MQQFYCVKEVLNERLKRGYEFAVKNEYIEEKVTEKLQGIAATARMDGFRKGKVSPEFVRRMYGESIAGEVVAQVIDDISSKFLKEGDFGGIVTSGVEIKAYPKVCSNSEGDGGLVYELKFEVMPEVPVVDIDGITLKEIEVNISQEDVDEFLEDLKANYPSFVDVDDESRGVSDGDRVTISYRSAFKGKALRGGSAQGFTFVLGKGQLLEQFERQIVGMKKGESKEFKLEFPLDYMAKHFAGKEVDMHVTVERLSVKDEINDRETLASKCGFGSVEDMVKFATDGLNRRFADMGSVVAQRELLEHLDASYSVDVPEYIVAQELGRMRRELEEGDLNDAEALTKEAEQRVKLGMLLMKVATDAGVAVEVNDILSFIRVNYSAYGRSMEDVLKLFKNREDFREHVKGKVLEDKVVRYIISRAKKDRQSMSAGELKSLFESV", - "output": "cytoplasm ; peptidyl-prolyl cis-trans isomerase activity ; cell cycle ; cell division ; protein folding ; protein transport" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MTQDVTSGYSNLDLDLRDNGVCVVTLNRPDKRNALDVATIEELVTFFSTAHRKGVRAVVLTGAGDHFCAGLDLVEHWKADRSADDFMHVCLRWHEAFNKMEYGGVPIIAALRGAVVGGGLELASAAHLRVMDQSTYFALPEGQRGIFTGGGATIRVSDMIGKYRMIDMILTGRVYQGQEAADLGLAQYITEGSSFDKAMELADKIASNLPLTNFAICSAISHMQNMSGLDAAYAEAFVGGIVNTQPAARERLEAFANKTAARVRPNS", - "output": "hydro-lyase activity ; protein hexamerization" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MPTPHEAEKQITGPEEADRPPSMSSHDTASPAAPSRNPCCLCWCCCCSCSWNQERRRAWQASRESKLQPLPSCEVCATPSPEEVQSWAQSFDKLMHSPAGRSVFRAFLRTEYSEENMLFWLACEELKAEANQHVVDEKARLIYEDYVSILSPKEVSLDSRVREGINKKMQEPSAHTFDDAQLQIYTLMHRDSYPRFLSSPTYRALLLQGPSQSSSEA", - "output": "brush border ; clathrin-coated vesicle ; Golgi apparatus ; membrane ; membrane raft ; plasma membrane ; G-protein alpha-subunit binding ; GTPase activity ; autophagy ; G protein-coupled receptor signaling pathway ; negative regulation of signal transduction ; response to ethanol ; small GTPase mediated signal transduction" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MNLNDDDDNYNSAIVIDNGSYLCKAGFGGEESPRAIFRSVVGRPNFCTRGVKNGMGQKDCYVGDEAIVKKSILSLKCPNESKSPVNWDDIEKILHHVFYNELRVTIDKGVLLSEIPLNPKENRERITQIMFETFDTPNFYLANQSVLSLYSKGRLNGIVLDSGNNITYTVPIYEGHSIPNSINQLEIAGNSVTEYLMKILNENRGYNFTTSSEKEIVKDIKEKFGFISLNYNNDLYSTKVATNEIEKSYQLPDGQMITIGKERFICGEVLFEPSLVNIESYGVHQLLYNSIINCDFEIRRGLYNNIILSGGTTMLPDFNDRIKNELINLSPSSMKIKVVENNTNENNSHLAWIGGSIFSSLSTFEQQSISKQEYMEYGSKIIQRKCF", - "output": "actin cytoskeleton ; cytoplasm ; ATP binding ; hydrolase activity ; myosin binding ; structural constituent of cytoskeleton ; phagocytosis" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MVKIGVLGLQGAVREHVKSVEASGAEAVVVKRIEQLEEIDGLILPGGESTTMRRLIDKYAFMEPLRTFAKSGKPMFGTCAGMILLAKTLIGYEEAHIGAMDITVERNAFGRQKDSFEAALSIKGVGEDFVGVFIRAPYVVNVADDVEVLSMHGERMVAVRQGPFLAASFHPELTDDHRVTAYFVEMVKEAKMKKVV", - "output": "glutaminase activity ; pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity ; glutamine catabolic process ; pyridoxal phosphate biosynthetic process" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MALFRKKDKYIRITPNNSLKGSVSHNVPEVPDELFAKCPACKHMIYKKDLGLAKICPTCSYNFRISAQERLTLTVDEGSFQELFISIETKDPLRFPGYQEKLQKAKETTGLHEAVLTGKAMVKGQQIALAIMDSHFIMASMGTVVGEKITRLFELAIEENLPVVIFTASGGARMQEGIMSLMQMAKVSAAVKRHSNAGLFYLTILTDPTTGGVTASFAMEGDIILAEPQSLVGFAGRRVIETTVRENLPDDFQKAEFLQDHGFVDAIVKRTELRDKIAHLVAFHGGGQ", - "output": "acetyl-CoA carboxylase complex ; acetyl-CoA carboxylase activity ; ATP binding ; carboxyl- or carbamoyltransferase activity ; zinc ion binding ; fatty acid biosynthetic process ; malonyl-CoA biosynthetic process" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MEDTLSLAEAMEDLVSAEDFLDYFAVPYDPAVVHVNRLHILQRFHDYLAKQAPNLPPEESQQRGIYRLWLERAYQDFVTSDSLTEKVFAVFQTVSKPDGGMSSFVSLDKVFRQ", - "output": "nitrogen fixation" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MSKFNRMHLIVLDSVGIGAAPDANNFVNAGVPDGASDTLGHISKTVGLNVPNMAKLGLGNIPREQPLKTVPAESNPTGYATKLEEVSLGKDTMTGHWEIMGLNITEPFDTFWNGFPEEILTQIEEFSGRKVIREANKPYSGTAVIDDFGPRQMETGELIIYTSADPVLQIAAHEDIIPVEELYRICEFARSITLERPALLGRIIARPYVGEPGNFTRTSNRRDLAISPFAPTVLDKLNEAGIDTYSVGKISDIFNGEGINHDMGHNKSNNHGVDNLIKAMTSEDFKHGFSFTNLVDFDALYGHRRNPQGYRDCLHEFDERLPEIIAAMKEDDLLMITADHGNDPTYAGTDHTREYIPFLAYSPSFKCSGLIPVGHFADISATIADNFGVEKAMIGESFLDKLV", - "output": "cytoplasm ; magnesium ion binding ; manganese ion binding ; phosphopentomutase activity ; 5-phosphoribose 1-diphosphate biosynthetic process ; cellular metabolic compound salvage ; deoxyribonucleotide catabolic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MTKHYLNSKYQSEQRSSAMKKITMGTASIILGSLVYIGADSQQVNAATEATNATNNQSTQVSQATSQPINFQVQKDGSSEKSHMDDYMQHPGKVIKQNNKYYFQTVLNNASFWKEYKFYNANNQELATTVVNDNKKADTRTINVAVEPGYKSLTTKVHIVVPQINYNHRYTTHLEFEKAIPTLADAAKPNNVKPVQPKPAQPKTPTEQTKPVQPKVEKVKPTVTTTSKVEDNHSTKVVSTDTTKDQTKTQTAHTVKTAQTAQEQNKVQTPVKDVATAKSESNNQAVSDNKSQQTNKVTKHNETPKQASKAKELPKTGLTSVDNFISTVAFATLALLGSLSLLLFKRKESK", - "output": "extracellular region ; metal ion binding" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MTSVHSLGFPRIGHKRELKKALESFWSREIDEQELQSRAAQLRDRHWRIQQTCGMDLVPVGDFSLYDHMLDMSCTLGAIPPRYGFAGGQVGLDTFFAMARGSATQPAMEMTKWFDTNYHFIVPEFHEGMDFRLSSERLFDQVKEVQALGLKAKPVLVGPITYLWLGKEKDLNAEAHHDAQHHHDDSACHGHGAPIGAACFDRLTLLPKVLPVYAEILARLAEMGVEWVQIDEPALALDLPQEWVEALESAYQTLRRDKTPKVLLATYFDSVADHAKALKALPVAGVHLDLRRAPQQLNSFLSDYPADKVLSLGVVDGRNVWRADLDAALELLQPAHKQLGDRLWVAPSCSLLHTPVDLEQETELDAELKSWLSFSVQKLDEVAIIGRALKEGVESVAQELAAARAAVASRKSSPRIHNPAVAQRLEGLGQDDGRRKSPFPIREAAQRARFKLPAFPTTSIGSFPQTPEIRKARLQNRKGELSNADYQKAMEAEIALVVKEQERLGIDVPVHGEPERNDMVEYFGEQLAGFAFTRHGWVQSYGSRYVKPPLIFGDVSRPTPMTVAWSKYAQSLTQRPMKGMLTGPVTILQWSFVRDDQPRERTALQIALAIRDEVRDLIDAGIGIIQIDEPAYREGLPLKRKDWGHYLEWASRAFRISAQIAPDDVQIHTHMCYSEFNDILPAIAAMDADVITIETSRSQMELLDAFATFNYPNEIGPGVYDIHSPRVPSVEEMVGLMEKAVKVVPAERLWINPDCGLKTRKWAEVTPALENMVEAARQVRARHG", - "output": "5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity ; zinc ion binding ; methionine biosynthetic process ; methylation" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MPPAALQATVSESVKDAIISKLRQPPSAVPSREWSAETRTSLTPADAGIAEARASAEDIELVDLQHHNFSEPRKRIVSPASLSRFEHSQAFAEILAFICVCNTRVVGKTLTEEIQISSACRTILEMLDQVAALRESTPPDASIGSSRFGNPAFRTFYAKIRENTDRLHRMIPGLETDSEWSRAARAELSVYFQECWGNEKRIDYGSGMELNMACWLLCLCKLRILRLPEDGACIVLRIFWTYVQVMRDIQSSYWLEPAGSHGVWGLDDYHFLPFLWGAGQLSSHRHLRPKAIHDAEIVDEFAPKYMYLACIQFINSVKTASLRWHSPMLDDISGAKSWSKVNQGMIKMYRAEVLKKLPIAQHIFFGSLLRFPEPATGELEEEDVEEDAHGHIHPAGKPHAHGTGEGQAAGWGDCCGIPIPSAFAAAEQEKKRQQGNFSSTMLGEKPFGTGVRRIPFD", - "output": "cytoplasm ; nucleus ; protein phosphatase type 2A complex ; peptidyl-prolyl cis-trans isomerase activity ; protein tyrosine phosphatase activator activity ; mitotic spindle organization ; response to osmotic stress" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MQPLTKDAGMSLSSVTLASALQVRGEALSEEEIWSLLFLAAEQLLEDLRNDSSDYVVCPWSALLSAAGSLSFQGRVSHIEAAPFKAPELLQGQSEDEQPDASQMHVYSLGMTLYWSAGFHVPPHQPLQLCEPLHSILLTMCEDQPHRRCTLQSVLEACRVHEKEVSVYPAPAGLHIRRLVGLVLGTISEVEKRVVEESSSVQQNRSYLLRKRLRGTSSESPAAQAPECLHPCRVSERSTETQSSPEPHWSTLTHSHCSLLVNRALPGADPQDQQAGRRLSSGSVHSAADSSWPTTPSQRGFLQRRSKFSRPEFILLAGEAPMTLHLPGSVVTKKGKSYLALRDLCVVLLNGQHLEVKCDVESTVGAVFNAVTSFANLEELTYFGLAYMKSKEFFFLDSETRLCKIAPEGWREQPQKTSMNTFTLFLRIKFFVSHYGLLQHSLTRHQFYLQLRKDILEERLYCNEEILLQLGVLALQAEFGNYPKEQVESKPYFHVEDYIPASLIERMTALRVQVEVSEMHRLSSALWGEDAELKFLRVTQQLPEYGVLVHQVFSEKRRPEEEMALGICAKGVIVYEVKNNSRIAMLRFQWRETGKISTYQKKFTITSSVTGKKHTFVTDSAKTSKYLLDLCSAQHGFNAQMGSGQPSHVLFDHDKFVQMANLSPAHQARSKPLIWIQRLSCSENELFVSRLQGAAGGLLSTSMDNFNVDGSKEAGAEGIGRSPCTGREQLKSACVIQKPMTWDSLSGPPVQSMHAGSKNNRRKSFIAEPGREIVRVTLKRDPHRGFGFVINEGEYSGQADPGIFISSIIPGGPAEKAKTIKPGGQILALNHISLEGFTFNMAVRMIQNSPDNIELIISQSKGVGGNNPDEEKNSTANSGVSSTDILSFGYQGSLLSHTQDQDRNTEELDMAGVQSLVPRLRHQLSFLPLKGAGSSCPPSPPEISAGEIYFVELVKEDGTLGFSVTGGINTSVPYGGIYVKSIVPGGPAAKEGQILQGDRLLQVDGVILCGLTHKQAVQCLTGPGQVARLVLERRVPRSTQQCPSANDSMGDERTAVSLVTALPGRPSSCVSVTDGPKFEVKLKKNANGLGFSFVQMEKESCSHLKSDLVRIKRLFPGQPAEENGAIAAGDIILAVNGRSTEGLIFQEVLHLLRGAPQEVTLLLCRPPPGALPELEQEWQTPELSADKEFTRATCTDSCTSPILDQEDSWRDSASPDAGEGLGLRPESSQKAIREAQWGQNRERPWASSLTHSPESHPHLCKLHQERDESTLATSLEKDVRQNCYSVCDIMRLGRYSFSSPLTRLSTDIF", - "output": "apical part of cell ; basolateral plasma membrane ; bicellular tight junction ; cytoplasm ; cytoskeleton ; plasma membrane ; 1-phosphatidylinositol binding ; bicellular tight junction assembly ; microtubule organizing center organization ; regulation of microtubule cytoskeleton organization" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MGPQQDRSAAKPYANGSTAAAAAAGRKENNKVVRYRECQRNHAASIGGHAVDGCREFMASGADGTAAALLCAACGCHQSFHRREVEAAAAECDCSSDTSSGTGRR", - "output": "cytoplasm ; metal ion binding" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MKGQRIRIKLQGFDYRVIDQSALEIVETAKRSGARVSGPIPLPTRVEKLSVNRSPHVDKKSMEQFETRTHKRLIDIIEPTAQTVDELKKLNLPSGVDITINV", - "output": "ribonucleoprotein complex ; ribosome ; structural constituent of ribosome ; tRNA binding ; translation" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "DILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYHIEPVAGEESQFIAYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPAYVKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEALYKAQAETGEIKGHYLNATAGTCEEMIKRAVFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAVIDRQKNHGIHFRVLAKALRMSGGDHIHSGTVVGKLEGEREITLGFVDLLRDDFIEKDRSRGIYFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLAREGNEIIREASKWSPELAAACEVWKEIKFEFEAMDTL", - "output": "chloroplast ; magnesium ion binding ; monooxygenase activity ; ribulose-bisphosphate carboxylase activity ; photorespiration ; reductive pentose-phosphate cycle" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MSLPQDLLYSKEHEWVKQEDGKLRIGITDFAQDELGDIVFVELPEIGEELKVDDPFGSVESVKTVSELYAPVSGKVVEINDDLEDSPEYVNESPYEKAWMIVIEPSDEKELEELLSAENYEAFIQD", - "output": "glycine cleavage complex ; glycine decarboxylation via glycine cleavage system ; protein lipoylation" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MKKIKSFGGKNLGGGKQEKLLKDFAKMQEELQKKIQELEESFSQIEVEASVGGGAVRIVATCDRRVKDIEIDEDLKEDFDTLKDLLIAGMNEVMEKIEKRREEEMSKITQQFGIPGLM", - "output": "bacterial nucleoid ; cytoplasm ; DNA binding" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MLSAFKLHNNRLSRLELDESDDLASSLWVDLVEPEEGERERVQTELGQSLATRPELDDIEASARFFEDEDGLHIHSFFYYEDADDHAGNSTVAFTIRDGRLYTLRERELPAFRLYRMRARNQTLVDGNAYELLLDLFETKIEQLADEIENIYSDLEALSRVIMEGQQGDEYDAALSTLAEQEDIGWKVRLCLMDTQRALNFLVRKARLPSSQLEQAREVLRDIESLLPHNESLFQKVNFLMQAAMGFINIEQNRIIKIFSVVSVVFLPPTLVASSYGMNFEFMPELRWSFGYPGAIALMIIAGLAPYLYFKRKNWL", - "output": "plasma membrane ; cobalt ion transmembrane transporter activity ; magnesium ion transmembrane transporter activity ; nickel cation transmembrane transporter activity" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MSTINTDANEAMPHISVNAQYIKDLSLENPDAPSSLAALEHRPQIDLSLDINITNLSEENFYEVELNIEAVARNEKYKLFQVELKYAGVFNLINIAPEQHQILLSVHCPAMIFPFARKIIASCTQDAGFQPLMIDPIDFGALYHKKMSEHQN", - "output": "cytoplasm ; unfolded protein binding ; protein folding ; protein tetramerization ; protein transport" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MAKLRVGIVFGGKSAEHEVSLQSAKNIVDAIDKTRFDVVLLGIDKAGQWHVNDAENYLQNADDPAHIALRPSAISLAQVPGKHQHQLINAQNGQPLPTVDVIFPIVHGTLGEDGSLQGMLRVANLPFVGSDVLSSAACMDKDVAKRLLRDAGLNIAPFITLTRTNRHAFSFAEVESRLGLPLFVKPANQGSSVGVSKVANEAQYQQAVALAFEFDHKVVVEQGIKGREIECAVLGNDNPQASTCGEIVLNSEFYAYDTKYIDDNGAQVVVPAQIPSEVNDKIRAIAIQAYQTLGCAGMARVDVFLTADNEVVINEINTLPGFTNISMYPKLWQASGLGYTDLISRLIELALERHTANNALKTTM", - "output": "cytoplasm ; ATP binding ; D-alanine-D-alanine ligase activity ; metal ion binding ; cell wall organization ; peptidoglycan biosynthetic process ; regulation of cell shape" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MSSDIEAPTSLTSMRGALPPAVADDVRALHLTTVRHDGVPPLSEQPLLWLSDQEAPVVHVLAWHAVTGGAQELVGYAQVDVGSSTTARAELVVAPGHRRRGTGRSLLAHAAQEAASIPGRRLHVWAHGDLPAARATAAATGLVVVRELWRMAVDVTQHPPGAPQLPPGVAVRAFVPGQDEDAWRRVNARAFAHHPEQGRMTSADLRARESEPWFDPAGFLLAERDGQLLGSVWTKVHPGSEAPDGAPGEEVGEIYVVGVDPDAQGLGMGRALTALGLAHLRDRGLRTVILYTGAENTVAVHTYRRAGFARTAVDVMYGPPPAGSPAHGTPLVRVTDTPSSPGDATMGS", - "output": "mycothiol synthase activity ; mycothiol biosynthetic process" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MFEVKMGSKMCMNASCGTTSTVEWKKGWPLRSGLLADLCYRCGSAYESSLFCEQFHKDQSGWRECYLCSKRLHCGCIASKVTIELMDYGGVGCSTCACCHQLNLNTRGENPGVFSRLPMKTLADRQHVNGESGGRNEGDLFSQPLVMGGDKREEFMPHRGFGKLMSPESTTTGHRLDAAGEMHESSPLQPSLNMGLAVNPFSPSFATEAVEGMKHISPSQSNMVHCSASNILQKPSRPAISTPPVASKSAQARIGRPPVEGRGRGHLLPRYWPKYTDKEVQQISGNLNLNIVPLFEKTLSASDAGRIGRLVLPKACAEAYFPPISQSEGIPLKIQDVRGREWTFQFRYWPNNNSRMYVLEGVTPCIQSMMLQAGDTVTFSRVDPGGKLIMGSRKAANAGDMQGCGLTNGTSTEDTSSSGVTENPPSINGSSCISLIPKELNGMPENLNSETNGGRIGDDPTRVKEKKRTRTIGAKNKRLLLHSEESMELRLTWEEAQDLLRPSPSVKPTIVVIEEQEIEEYDEPPVFGKRTIVTTKPSGEQERWATCDDCSKWRRLPVDALLSFKWTCIDNVWDVSRCSCSAPEESLKELENVLKVGREHKKRRTGESQAAKSQQEPCGLDALASAAVLGDTIGEPEVATTTRHPRHRAGCSCIVCIQPPSGKGRHKPTCGCTVCSTVKRRFKTLMMRRKKKQLERDVTAAEDKKKKDMELAESDKSKEEKEVNTARIDLNSDPYNKEDVEAVAVEKEESRKRAIGQCSGVVAQDASDVLGVTELEGEGKNVREEPRVSS", - "output": "mitochondrion ; nucleus ; DNA binding ; DNA-binding transcription factor activity ; zinc ion binding ; negative regulation of DNA-templated transcription ; response to abscisic acid ; response to sucrose" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MSKIIGIDLGTTNSAVAVLEGTESKIIANPEGNRTTPSVVSFKNGEIIVGDAAKRQAVTNPDTVISIKSKMGTSEKVSANGKEYTPQEISAMILQYLKGYAEDYLGEKVTKAVITVPAYFNDAQRQATKDAGKIAGLEVERIVNEPTAAALAYGLDKTDKEEKILVFDLGGGTFDVSILELGDGVFDVLSTAGDNKLGGDDFDQKIIDHLVAEFKKENGIDLSTDKMAMQRLKDAAEKAKKDLSGVTSTQISLPFITAGEAGPLHLEMTLTRAKFDDLTRDLVERTKVPVRQALSDAGLSLSEIDEVILVGGSTRIPAVVEAVKAETGKEPNKSVNPDEVVAMGAAIQGGVITGDVKDVVLLDVTPLSLGIETMGGVFTKLIDRNTTIPTSKSQVFSTAADNQPAVDIHVLQGERPMAADNKTLGRFQLTDIPAAPRGIPQIEVTFDIDKNGIVSVKAKDLGTQKEQTIVIQSNSGLTDEEIDRMMKDAEANAEADKKRKEEVDLRNEVDQAIFATEKTIKETEGKGFDAERDAAQAALDDLKKAQEDNNLDDMKTKLEALNEKAQGLAVKLYEQAAAAQQAQEGAEGAQATGNAGDDVVDGEFTEK", - "output": "ATP binding ; ATP-dependent protein folding chaperone ; unfolded protein binding" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MEEFQGYLELDRFRQHDFLYPLIFREYIXXXAHDHGLNRVILLENLAYDNKSSLLIVKRLITRMYQQNHLMISANDSNQNRFLGYNKNLYSQMISEGFSIIAEIPYSLRLISSLEGAQIIRSYNLRSIHSIFPFLEDKFPHLNYVADVLIPYPIHLEILVQTLRYRVKDASSLHLLRFFLHEYSNGNILFILNKSISIFSKSNSRLLLFLYNSYICEYESLFLFLRNQSSHLRLTSSGVLFERIYLHRKMGDLAEVFVNDFRGILCFLKDPFIHYVRYQGKSILSSKDTPLLMNKWKYYLVSLWQCHFYVWSHPGRIYINQLSKHSLDFLGYFSNVPLNPSMVPSQMLENSFVINNAPKKLDTIVPIIPLIGSLAKAKFCNALGHPISKPTWADLSDFDIINRFVRICKNLSHYYSGSSKKKGMYRIKYILRLSCVKTLARKHKSTIRAFLKRLGSELFEEFFTEEEEFLSLIFPRTSFTLRRLYRGRVWYLDIICMNGLANHE", - "output": "chloroplast ; RNA binding ; mRNA processing ; RNA splicing ; tRNA processing" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MTQPAIYLDNNATTRVFPEVVAAMLPYFTEHFGNASSGHGFGAQAGLGLRKARLAVAALIGAASEQEILFTSGGTEANTTAIRSALAVQDGRREIIISAVEHPAILMLAADLEKTEGVRVHRIPVDHLGRLDLAAYRAALSDRVAVASIMWANNRYDLPVPQLAAEAHAAGALFHTDAVQAVGKLPMSLADTEIDMLSLSGHKFHGPKGVGALYLRKGVAFRPLLRGGKQERGRRAGTENVPALVGMGLAAEIVAARMAADLSRIATLRDWLESGILALGGCQRLGDPANRLANTCTLAFDRIDSEAVLTKLARAGIAISTGSACASGAMEPSHVTRAMAVPFTAAHGVVRFSLSADTTAAELSRVLAILPEILAELRPVPVTA", - "output": "cysteine desulfurase activity ; iron-sulfur cluster binding ; metal ion binding ; nitrogen fixation" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MKASRFFIGTLKEAPADAEIVSHKLMVRAGMIRRVAGGIYNYLPVGLRSIRKVEAIVREEMNRAGAIELLMPAVQPAELWQESGRWEQYGPELLRFKDRKQNEFVIGPTHEEVVTDIARNQIKSYRQMPVNFYQIQTKFRDEIRPRFGVMRGREFIMKDAYSFDKDHESLKESYKKMYDAYVRIFTRIGLEFRPVAADNGSIGGSGSHEFHVIADTGEDAIAYCPTSDFAANVEAAEALPLLASRAAPAEAMQKVATPGKAKCEAVAELMGIPLERTIKSIVLATDNEGAEPTIWLLMLRGDHDLNEIKTAKLPGLAGHRFATEAEIVEWFGTPPGYLGPIGTKKPVRVVADRTVANMSDFVVGANEVDYHIAGVNWGRDLPEPVVADIRNVKAGDPSPDGKGALDICRGIEVGHVFQLGTKYSDAMGATFIDESGKAQPMVMGCYGIGITRILGAAIEQNFDDKGIVWPEAIAPFEVVLCPMGYDRSDAVREAADKLYADLAAAGIDVILDDRGERPGVMFADWELIGVPHRLVIGERGLKDGKIEYQGRRDAEATLLPADSAAAAVAEKVRAALAR", - "output": "cytoplasm ; aminoacyl-tRNA editing activity ; ATP binding ; proline-tRNA ligase activity ; prolyl-tRNA aminoacylation" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MAPYPCGCHILLLLFCCLAAARANLLNLNWLWFNNEDTSHAATTIPEPQGPLPVQPTADTTTHVTPRNGSTEPATAPGSPEPPSELLEDGQDTPTSAESPDAPEENIAGVGAEILNVAKGIRSFVQLWNDTVPTESLARAETLVLETPVGPLALAGPSSTPQENGTTLWPSRGIPSSPGAHTTEAGTLPAPTPSPPSLGRPWAPLTGPSVPPPSSGRASLSSLLGGAPPWGSLQDPDSQGLSPAAAAPSQQLQRPDVRLRTPLLHPLVMGSLGKHAAPSAFSSGLPGALSQVAVTTLTRDSGAWVSHVANSVGPGLANNSALLGADPEAPAGRCLPLPPSLPVCGHLGISRFWLPNHLHHESGEQVRAGARAWGGLLQTHCHPFLAWFFCLLLVPPCGSVPPPAPPPCCQFCEALQDACWSRLGGGRLPVACASLPTQEDGYCVLIGPAAERISEEVGLLQLLGDPPPQQVTQTDDPDVGLAYVFGPDANSGQVARYHFPSLFFRDFSLLFHIRPATEGPGVLFAITDSAQAMVLLGVKLSGVQDGHQDISLLYTEPGAGQTHTAASFRLPAFVGQWTHLALSVAGGFVALYVDCEEFQRMPLARSSRGLELEPGAGLFVAQAGGADPDKFQGVIAELKVRRDPQVSPMHCLDEEGDDSDGASGDSGSGLGDARELLREETGAALKPRLPAPPPVTTPPLAGGSSTEDSRSEEVEEQTTVASLGAQTLPGSDSVSTWDGSVRTPGGRVKEGGLKGQKGEPGVPGPPGRAGPPGSPCLPGPPGLPCPVSPLGPAGPALQTVPGPQGPPGPPGRDGTPGRDGEPGDPGEDGKPGDTGPQGFPGTPGDVGPKGDKGDPGVGERGPPGPQGPPGPPGPSFRHDKLTFIDMEGSGFGGDLEALRGPRGFPGPPGPPGVPGLPGEPGRFGVNSSDVPGPAGLPGVPGREGPPGFPGLPGPPGPPGREGPPGRTGQKGSLGEAGAPGHKGSKGAPGPAGARGESGLAGAPGPAGPPGPPGPPGPPGPGLPAGFDDMEGSGGPFWSTARSADGPQGPPGLPGLKGDPGVPGLPGAKGEVGADGVPGFPGLPGREGIAGPQGPKGDRGSRGEKGDPGKDGVGQPGLPGPPGPPGPVVYVSEQDGSVLSVPGPEGRPGFAGFPGPAGPKGNLGSKGERGSPGPKGEKGEPGSIFSPDGGALGPAQKGAKGEPGFRGPPGPYGRPGYKGEIGFPGRPGRPGMNGLKGEKGEPGDASLGFGMRGMPGPPGPPGPPGPPGTPVYDSNVFAESSRPGPPGLPGNQGPPGPKGAKGEVGPPGPPGQFPFDFLQLEAEMKGEKGDRGDAGQKGERGEPGGGGFFGSSLPGPPGPPGPPGPRGYPGIPGPKGESIRGQPGPPGPQGPPGIGYEGRQGPPGPPGPPGPPSFPGPHRQTISVPGPPGPPGPPGPPGTMGASSGVRLWATRQAMLGQVHEVPEGWLIFVAEQEELYVRVQNGFRKVQLEARTPLPRGTDNEVAALQPPVVQLHDSNPYPRREHPHPTARPWRADDILASPPRLPEPQPYPGAPHHSSYVHLRPARPTSPPAHSHRDFQPVLHLVALNSPLSGGMRGIRGADFQCFQQARAVGLAGTFRAFLSSRLQDLYSIVRRADRAAVPIVNLKDELLFPSWEALFSGSEGPLKPGARIFSFDGKDVLRHPTWPQKSVWHGSDPNGRRLTESYCETWRTEAPSATGQASSLLGGRLLGQSAASCHHAYIVLCIENSFMTASK", - "output": "basement membrane ; collagen trimer ; collagen-containing extracellular matrix ; endoplasmic reticulum lumen ; extracellular exosome ; extracellular matrix ; extracellular region ; extracellular space ; extracellular matrix structural constituent ; identical protein binding ; metal ion binding ; animal organ morphogenesis ; cell adhesion ; collagen fibril organization ; negative regulation of cell population proliferation ; notochord development ; skeletal system development ; visual perception" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MPLQIFNTTRKELHEELLERTVIDVLDSEGFGVESIVAVYCGKKMIRKINREFLQHDYATDTITFRYSDNREIDGEFYISLDVIEENARRFEVDFKLELLRVTIHSALHLIGYDDQTVDGRLQMQQKEEFYLNRYSEANNQTPS", - "output": "cytoplasm ; metalloendopeptidase activity ; RNA endonuclease activity ; zinc ion binding ; rRNA processing" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MYQRPQNDYLRVNKRKSNYDQLNADSNSVPQLAQTQPRVQVYIIDKNDFKSLVQQLTSPQPCDRLPQNIPKHQDIRPEPINWTSSIPPSAMAVQEDPDVSLYMAYLQSLLEESSGSNGDQFEEPFDKYHSHMMAQSQPQDPTQSMPQSNGFEPFPSSWFNGSTQEMHGASSLQSTRVDYEYPLPLTPNFTFSSMTQHEVFGSDLDSIGPDEDLEFSYEIN", - "output": "nucleus ; defense response" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MAKSGIYLGCFILILIQNMVAANPLFNRNNVQELENLKDLIHQLEERVAVNEEPEVYPESEDMKMDAEEEDAGISPGALRQSEENLLMNIVDRIAPESPLRSRFRDLAGLAKTAKSFNSCFGTRMDRIGSWSGLGCNSLKNGTKKKIFGN", - "output": "extracellular region ; hormone activity ; blood vessel diameter maintenance" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MSDRLTLLRPDDWHIHLRDGAVLPHTVGDVARTFARAIIMPNLVPPVRTANEAGAYRERILAARPAGSRFEPLMVLYLTDNISPEDIRAAKASGFVYAAKLYPAGATTNSDSGVTSIDNIFPAIEAMAEVGMPLLVHGEVTRSEIDVFDREKRFIDEHMRRVVERFPTLKVVFEHITTSDAAQFVTEAPANVGATITAQHLLYNRNHMLVGGIRPHFYCLPILKRNTHQVALLDAATSGNPKFFLGTDSAPHARHAKEAACGCAGCYTAYAAIEMYAEAFEQRNALDKLEGFASLHGPAFYGLPANTDTITLVREEWTAPESLPFGEQTVVPLRAGEKLRWRLLEKNA", - "output": "dihydroorotase activity ; zinc ion binding ; 'de novo' UMP biosynthetic process ; pyrimidine nucleobase biosynthetic process" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MNHIDFGFKKVDYTKKQGLVNSVFSNVADKYDLMNDLMSFGLHRLWKDEFIRRIPNLNSHILDVASGSGDIALKLAKKARDRGNNIALTLSDINEEMLKNAKKKTIDLNLFQNLKFTVASAEELPYPDNSFDYYTIAFGIRNVPDINKALKEAYRVLKPMGKFICLEFSKVKESYFKDFYKFYSFSIIPTIGQVITGNKEAYEYLVESIELFPSQDEFRIMIKEAGFEEVGYKNLSGGIVAIHSGYKI", - "output": "2-octaprenyl-6-methoxy-1,4-benzoquinone methylase activity ; demethylmenaquinone methyltransferase activity ; S-adenosylmethionine:2-demethylmenaquinol methyltransferase activity ; S-adenosylmethionine:2-demethylmenaquinol-7 methyltransferase activity ; S-adenosylmethionine:2-demethylquinol-8 methyltransferase activity ; aerobic respiration ; menaquinone biosynthetic process ; methylation ; ubiquinone biosynthetic process" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MIRYLRGLVLKKEAGGFVLLAGGVGFFLQAPTPFLQALEEGKEVGVHTHLLLKEEGLSLYGFPDEENLALFELLLSVSGVGPKVALALLSALPPRLLARALLEGDARLLTSASGVGRRLAERIALELKGKVPPHLLAGEKVESEAAEEAVMALAALGFKEAQARAVVLDLLAQNPKARAQDLIKEALKRLR", - "output": "cytoplasm ; Holliday junction helicase complex ; ATP binding ; DNA binding ; four-way junction helicase activity ; DNA recombination ; DNA repair ; SOS response" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MEKPIVAIVGRPNVGKSTLFNKLIGERRAIIADEAGTTRDRQYGETIWNGRVFTIVDTAGLLVGDDDPNLPLAEIVRRTHQQAQLAIDEADVIVFMVDVREGLIAADEEVAALLRRSSKPVVLGVNKADTEDRRQNAVEFYNLGLGDPIALSAYHGTGSGDLLDEIVRHLPAGQEEEEDDNSLKIAIVGRPNVGKSSLLNKLVGEERVVVSNIPGTTRDSIDTKLTYKGIPITLIDTAGIRRRGSIEQGIERYSVLRTMKAIERCHIALILVDAQEGPTAQDTHVAGMVLEANKGLAIIVNKWDLIDKAKFSYEDAKTTMSQVFHFAPYAPIEFISAKTGQRATKVLDIAQTIQSERNKRVSTSDINNLLRAAVREHPPTAMHKGAHLRLFYATQAQVEPPVFLFFSNAPEQVHFGYKRYLENRIREQYGFIGTPIILVFKGREEEQTVSVSGKR", - "output": "GTP binding ; ribosome biogenesis" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MSPITLDLTSDFNPANTTGAGSSSSQPRTLLVAPPSVASHEERISALFSTYPRDTTDLHMLDRLAAGLVTLPTSTYDLILVLTDPDGSRHAEASALLSNRAVWSLLVPALKAGGKLRSEDGTLGRDTTTPEAREAVLAGLVAGADGFTKPDYAEEEAVPLRFGLKRKTNPNPVVAPIQPVAQVVTAAPAGVGFVTLDLNDDLDLDGEDDDDDVIDEDTLLTEADLRRPIQQPPECQPKPGKKRRACKDCTCGLAERLEAEDKARRDKADQALNTLKLKSEDLLELDLTVPGKTGSCGSCALGDAFRCAGCPYLGLPPFKVGEEVSILNNVPQL", - "output": "cytoplasm ; mitochondrial intermembrane space ; 2 iron, 2 sulfur cluster binding ; 4 iron, 4 sulfur cluster binding ; electron transfer activity ; metal ion binding ; iron-sulfur cluster assembly" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MNRVLYPGTFDPITKGHGDLVERASRLFDQVVIAVAASPKKNPLFPLEQRVELAREVTKHLPNVEVVGFSTLLAHFAKEQNANVFLRGLRAVSDFEYEFQLANMNRQLAPDVESLFLTPSERYSFISSTLVREIAALGGDITKFVHPAVAQALTERFKR", - "output": "cytoplasm ; ATP binding ; pantetheine-phosphate adenylyltransferase activity ; coenzyme A biosynthetic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MPNIKSAAKRVRQNKVRRLRNKSVRTRFRNVTKQLLKAIEINEEPEKVNELLRLSYSVLDKAAKKGVIHKRQASRRKSRLTAKVKAYLEARSAGSAQS", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MKTPNAQEAEGQQTRAAAGRATGSANMTKKKVSQKKQRGRPSSQPRRNIVGCRISHGWKEGDEPITQWKGTVLDQVPINPSLYLVKYDGIDCVYGLELHRDERVLSLKILSDRVASSHISDANLANTIIGKAVEHMFEGEHGSKDEWRGMVLAQAPIMKAWFYITYEKDPVLYMYQLLDDYKEGDLRIMPESSESPPTEREPGGVVDGLIGKHVEYTKEDGSKRIGMVIHQVETKPSVYFIKFDDDFHIYVYDLVKKS", - "output": "cytosol ; nucleoplasm ; methylated histone binding ; cell cycle ; gamete generation ; regulation of DNA-templated transcription" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MSIGKNVARLRRAKSTRLHIRKLGVPRLSVLRTGRHLYAQIFTADGSKVIAAANTLQSQVKGGLKNGKNSLAAIKVGKLIAERARAVGVDRIAFDRSGYLYHGRIKILADAARDAGLKF", - "output": "cytoplasm ; ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MEAGAYLNAIIFVLVATIIAVISRGLTRTEPCTIRITGESITVHACHIDSETIKALANLKPLSLERLSFQ", - "output": "host cell endoplasmic reticulum membrane ; membrane ; transport of virus in host, cell to cell" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MATTASNHYNLLGSGSSIVHADPGGMQQAQSYRDAQTLVQSDYTLQSNGHPLSHAHQWITALSHGDGAPWATSPLGQQDIKPTVQSSRDELHVSGTLQHQSRAPHLVHPAHGNHHGPGAWRSTGSTHLSSMASSNGQGLLYSQPSFTVNGMINPGSGQGIHHHGLRDSHDDHHGDHGHQQVSQAQQQHSQLQGGHQDHSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSSSGSPTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAPEITSLADSLQLEKEVVRVWFCNRRQKEKRMTPPGGTIPGAEDIYGASRDTPPHLGVQTSVQ", - "output": "nucleus ; DNA binding ; DNA-binding transcription factor activity, RNA polymerase II-specific ; brain development" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MIRADLTDIPTYVPGKNLGDALKLSSNEVAFPPLPAAVSAITEAATGANRYPDMGAVELRGVLADHLELTPEQITVGCGSSALCQQLVQATCAAGDEVIFPWRSFEAYPIFARVAGATAVPIPLLPDTQGHDLEGMLDAITDRTRLIFLCNPNNPSGTTFTEEQFEAFMQRVPADVVVGLDEAYFEFNRAEDSPVSTEAVQRYPNVIGLRTFSKAYGLAGVRVGYAFGNPELIGAMNKVAIPFAVSSLAQAAAIASLNAADELLERTEEVVTERERVAQVVGAAPSQANFVWLPGEGAAELAGRLAEHGVVIRAFPEGARITVTNAAETDRLIRAWEAVHHG", - "output": "histidinol-phosphate transaminase activity ; pyridoxal phosphate binding ; histidine biosynthetic process" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "AYGEGANVFGKRKETDQFFEISGDGWSGKL", - "output": "chloroplast ; chloroplast thylakoid membrane ; photosystem II ; photosynthesis" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MRVERVLLKDYTTLGVGGPAELWTVETREELKRATEAPYRVLGNGSNLLVLDEGVPERVIRLAGEFQTYDLKGWVGAGTLLPLLVQEAARAGLSGLEGLLGIPAQVGGAVKMNAGTRFGEMADALEAVEVFHDGAFHVYCPEELGFGYRKSHLPPGGIVTRVRLKLKERPKEEILRRMAEVDRARKGQPKRKSAGCAFKNPPGQSAGRLIDERGLKGLRVGDAMISLEHGNFIVNLGQARAKDVLELVRRVQEELPLELEWEVWP", - "output": "cytoplasm ; FAD binding ; UDP-N-acetylmuramate dehydrogenase activity ; cell cycle ; cell division ; cell wall organization ; peptidoglycan biosynthetic process ; regulation of cell shape" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MSGIFIAIILLTILALLFGILLGFAAEKFKVEGDPLVDQLEALLPQTQCGQCGYPGCRPYAEAIANGEKINLCPPGGSATMEKLAEMAGVEPEPLSATEEVQVKKVAYIREEECIGCTKCIQACPVDAILGSGKLMHTVITDYCTGCDLCVAPCPVDCIDMLPVEQTVKNWDWKLNAIPVKTLDEDCQC", - "output": "plasma membrane ; 4 iron, 4 sulfur cluster binding ; electron transfer activity ; metal ion binding" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MNSSFHLHFLDLNLNATEGNLSGPNVKNKSSPCEDMGIAVEVFLTLGVISLLENILVIGAIVKNKNLHSPMYFFVCSLAVADMLVSMSSAWETITIYLLNNKHLVIADAFVRHIDNVFDSMICISVVASMCSLLAIAVDRYVTIFYALRYHHIMTARRSGAIIAGIWAFCTGCGIVFILYSESTYVILCLISMFFAMLFLLVSLYIHMFLLARTHVKRIAALPGASSARQRTSMQGAVTVTMLLGVFTVCWAPFFLHLTLMLSCPQNLYCSRFMSHFNMYLILIMCNSVMDPLIYAFRSQEMRKTFKEIICCRGFRIACSFPRRD", - "output": "plasma membrane ; hormone binding ; melanocortin receptor activity ; adenylate cyclase-activating G protein-coupled receptor signaling pathway ; G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MEEIVGLREGSPRKPVPLQELWRPCPRIRRNIQGSLEWLKERLFRVGEDWYFLVALGVLMALISYAMNFAIGRVVRAHKWLYREIGDGHLLRYLSWTVYPVALLSFSSGFSQSITPSSGGSGIPEVKTILTGVILEDYLDIKNFGAKVVGLSCTLATGSTIFLGKLGPFVHLSVMIAAYLGRVRTKTVGEPENKTKEMELLAAGAAVGVATVFAAPISGVLFSIEVMSSHFSVWDYWRGFFAATCGAFMFHLLAVFNSEQETITSIYKTSFPVDIPFDLPEIFFFVALGAICGILSCGYNYCQRTSLFFLKSNGFTSKLLATSKPLYSALAAVVLASITYPPGVGRFMASRLSMSEYLETLFDNNSWALMTKNSSPPWSAEPDPQNLWLEWCHPQMTVFGTLVFFLVMKFWMLILATTIPIPAGYFLPIFVYGAAIGRLFGEVLSLAFPEGIVAGGKVSPIMPGAYALAGAAAFSGAVTHTLSTALLAFEVSGQIVHALPVLMAVLAANAICQSYQPSFYDGTIIVKKLPYLPWIRGRKIGSHLVTVGHFMNCTLTTLAKDMPLEEVIKVVISTDVTQYPLVETTESQVLVGIVKRTHLVQSLHTDSASWAPGQQPCLQDILANGCPTQPVTLQLSTETSLHETHNLFELLNLQLLFVTSRGRAVGSVSWVELKKAISTLTNPPAPK", - "output": "chloride channel complex ; Golgi membrane ; plasma membrane ; chloride channel activity ; metal ion binding ; voltage-gated chloride channel activity ; chloride transport ; regulation of monoatomic ion transmembrane transport ; renal absorption ; renal sodium ion absorption ; transepithelial chloride transport" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MNDRLAARLEAEVRGEILRDEPMARHTSLRVGGPADFFVTPADPDDMRALLAILAETGTPWLAVGGGYNLLIRDGGFRGVVISSARMTSLERLEGNRAVVGAGVANGRLTAFLRNEGLAGLEFLCGIPGTVGGALAMNAGAHGGAILDRVEEILTIGTAGFECKGRELLDYGYRYLKLQPGEIIIGATFVLDSDDPRRISERIDGCRAHRTASQQVGFPNAGSFFKNPPGQAAWRLIEDAGLRGARVGGAQVSEVHTNFLVNRGGATAADFLALAARIKDAVKLKSGTALEEEVKIFGDE", - "output": "cytosol ; FAD binding ; flavin adenine dinucleotide binding ; UDP-N-acetylmuramate dehydrogenase activity ; cell cycle ; cell division ; cell wall organization ; peptidoglycan biosynthetic process ; regulation of cell shape" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MRLHLLLLILLLFSILLSPVRGGLGPAEGHCLNLFGVCRTDVCNIVEDQIGACRRRMKCCRAWWILMPIPTPLIMSDYQEPLKPNLK", - "output": "extracellular space ; CCR6 chemokine receptor binding ; chemoattractant activity ; cell chemotaxis ; defense response to bacterium" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MELQRAQRNLKFLQNEDYVNVTDQTNLNGESQNAYSLGMETQVPEMQFSLSSDDDSIGTQVKSVTAQKSPMTQETTKNDTERNKDVDKSCNPVSTSHPDLGGSNIEENIFINTQIQSRLDDAEEETNLKLKLEKFKYSFKSSNADDTHSNANVTAKRRPAIRKANSKLKTKPKTKRDPKIIKNITDFNINNYERSRTASLLKQLSGKHKKVLDIIKTQNEGNSDKPPRARNNKGEKATFDTYSEQEWKDIMKLLLQKFPQSEETDLNEVQKFLYGSEKSSNSLDNQESSQQRLWTASQLPPELPDEAIQPEQEERIRDTQSAVNFLSLSQVMDDKSEIMKDEESIIISRGDSTSSQEYGNGLEPQQPVGNVVGEDIELAVGTRINAFSLTDYKACKPMSVEVSRRCENSTDNDYDNISIVSDTTDETSTLFPLDQYRYVFIENDERPPLATDTIGSTQFFTPNTSPLDGIIDLTQESFKAVRSLISPLKVENNKTGVTSQASNQVQVPATRTPTIIPQKNLTTTLKTEEEKNNIGSSIRVKLLQESVVKLNPKLVKHNFYRVEANDSEEEETEFDDQFCIADIQLVDSSKISTKDSTQNPTTSNDIIDTSAASSIASPEKFCEIMMSQSMKELRQSLKTVGLKPMRTKVEIIQSLQTASQILSTANPDNKGEHGGVANFSKIEIFDHLTELIEAFPDFLERIYTFEPIPLNELIEKLFSAEPFVSQIDEMTIREWADVQGICLRNDKK", - "output": "cytoplasm ; Slx1-Slx4 complex ; 5'-flap endonuclease activity ; DNA recombination ; DNA repair ; DNA replication ; organelle organization" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MSTSGPAAPGDVPALPPPPPGPGSGPAPPAPAATARDTMDGRAELPIFPRAGVPPLAASDTVPAVPEGAGAARPAAPPRPTSFSVLDILDPNKFNSRRRRCVLLGPVVPATCAPCAPAACVAVPAASGRSPRAELERRALSAATGVAAAAGAEPTSAGDSYRADEAEANGYSSGSGRSPTADSEDEAPEDEDEEEAPEVQDAQGTEEPRGGSGGLGARGSGCPGAAEVEASPVDDTAAPGPRGNSPGAPGPPATATGAGSAGSTPQGAAVTTKPKRKRTGSDSKSGKPRRARTAFTYEQLVALENKFKATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPGADTSAPTGGGGGPGPGAGPGAGLPGGLSPLSPSPPMGAPLALHGPAGYPAHSPGGLVCAAQLPFLSSPAVLSPFVLGSQTYGAPAFYAPHL", - "output": "nucleus ; DNA-binding transcription factor activity, RNA polymerase II-specific ; RNA polymerase II cis-regulatory region sequence-specific DNA binding ; cell differentiation ; lipid metabolic process ; nervous system process ; regulation of generation of precursor metabolites and energy ; regulation of glucose metabolic process ; regulation of transcription by RNA polymerase II" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MGTFTLHQGQSNLIKSFFRNYYLNAELGLPNDMELREFALQPFGSDMYIRHLSFSSSEELRDYLVNRNLPLHLFYSSARYQLPSARDMEEKAWMGSDLLFDIDADHICKLRSIRFCPVCGNAITSEKCERDNVETLEYVEMTSECIKRGLEEARNLVEILEDDFGLKPKVYFSGNRGFHVQVDCYGDCALLDSDERKEIAEYVMGVGVPSYPGGSESAPGWVGRKNRGINGVTIDGQVTIDVKRLIRIPNSLHGKSGLIVKEVTNLDDFEFNEALSPFTGYTIFLPYISIETEVLSRNIKLNRGVPIKIESSIGIYLHLKNLGEVKAYVR", - "output": "DNA-directed RNA polymerase complex ; primosome complex ; DNA primase activity ; metal ion binding" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MELRRGGVGSQAAGRRMDGDCRDGGCGSKDAGSEDYENLPTSASVSTHMTAGAMAGILEHSIMYPVDSVKTRMQSLNPDPKARYTSIYGALKRIMHTEGFWRPLRGLNVMMMGAGPAHAMYFACYENMKRTLNDVFSHQGNSHLANGIAGSMATLLHDAVMNPAEVVKQRLQMYNSQHQSALSCIRTVWRTEGLGAFYRSYTTQLTMNIPFQSIHFITYEFLQEQVNPRRDYNPQSHIISGGLAGALAAAATTPLDVCKTLLNTQENMALSLANVSGRLSGMANAFRTVYQLNGLAGYFKGIQARVIYQMPSTAISWSVYEFFKYFLTKRQLENRTLY", - "output": "mitochondrial inner membrane ; mitochondrial membrane ; mitochondrion ; ferrous iron transmembrane transporter activity ; iron ion transmembrane transporter activity ; iron import into the mitochondrion ; positive regulation of hemoglobin biosynthetic process" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MSAFTPASEVLLRHSDDFEQSRILFAGDMQDDLPGRFECAASRAHTQQYHHWQLLSRQMEDRVRFSLVAEQSDVADCDTLIYYWPKNKPEAQFQLMNLLSMMPVGCDIFVVGENRSGVRSAESMLAEYATLNKIDSARRCGLYHGRLDKQPTFDAEKYWGEYQLDGLTIKTLPGVFSRDGLDVGSQLLLSTFTPHTKGKVLDVGCGAGVLSAVLASHSPKVRLTLSDVSAPAVEASRATLAANGLEGDVFASNVFSEVTGRFDIIISNPPFHDGMETSLEAAQTLIRGAVRHLGSGGELRIVANAFLPYPKLLDEIFGFHEVLAQTGRFKVYRTVMTRQAKK", - "output": "cytoplasm ; 16S rRNA (guanine(1207)-N(2))-methyltransferase activity ; nucleic acid binding" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MTPESVMMMGTEAMKVALALAAPLLLVALVTGLIISILQAATQINEMTLSFIPKIIAVFIAIIIAGPWMLNLLLDYVRTLFTNLPYIIG", - "output": "bacterial-type flagellum basal body ; plasma membrane ; bacterial-type flagellum assembly ; protein secretion" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MARNKIALIGSGMIGGTLAHLAGLKELGDIVLFDIADGIPQGKGLDIAQSSPVEGFDASLTGASDYSAIEGADVCIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPNAFVICITNPLDAMVWALQKFSGLPKNKVVGMAGVLDSSRFRLFLAEEFNVSVKDITAFVLGGHGDTMVPLARYSTVAGIPLPDLIQMGWTTKEKLDQIIQRTRDGGAEIVGLLKTGSAYYAPAASAIEMAEAYLKDKKRVLPCAAHLSGQYGVKDMYVGVPTVIGAGGIERIIEIDLNKGEKEAFDKSVAAVAGLCEACINIAPSLK", - "output": "L-malate dehydrogenase activity ; carboxylic acid metabolic process ; tricarboxylic acid cycle" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MPREKQKRGRRAEDKAKKDAAKRKRDEGPEESAVKRLKPSAETNTSNNEIISGADYIPLGQDDGGNDVPMNDAPANDMPFYGLLDSEEQEYFSKANEVLELNQFHDAEERRLFVDSVYREADGKELKVACSQSCSRLMEKLISLSDMRQIRRLFSKFIGHFLHLVQHRFASHCCETLFINAAPGVTEKISKSKGRKAEVDEEDEPEPELSLAEMFMKVVEELEGNWGYLLTERFASHTIRVLLFVLAGEPVDLSSTDSVVASRKKERLGIVNTEAPEEKAAAEKRKVPEVFEATLKKVMNDMVSGLDNTYLRALATHPVGNPVLQVLVFLELSHFGKASAKDPNSIIRRLIPDDDFGENAESSTFVRGLLYDPVGSRLLETIIKSMPGKLFKSLYKNIIRDRIGSLARNTTAGYVVLRTLERLGKDDLQDAMESIIPEIPGLIERSRLIVPKVLIERCLVRGVDTKPLSDALESAYDKDPAQRLEQMLKLEPAASEDDSEEKRKQTGNNQTAAAEKLHGSLLAQTMLTASGPVSGLIYSSLLAQSPDSLLRLAKDPTASRVLQQALTAPTSTSQFRRQFTTRFSGHLVELALDSSGSHVVDALWPATKDLFFVKERMAQELLNEELSLRDSFVGRAVWRNWSMDLYKRRRGEWASKAKGLDSIENGQRERPKSRIDLARAKFAAKAAEESSKAPVAAKT", - "output": "nucleolus ; RNA binding ; rRNA processing" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MMNMQSMMKQAQKLQKQMQVSQEEIANTTFVGKSAQDLVTVEFSGDRTLKSLNINPDVIDPEDPETLQDMVTDAVNDALSQIEKVTEQKLGKFTKGLPF", - "output": "bacterial nucleoid ; cytoplasm ; DNA binding" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MEKLTDLNYTLSVITLMNDTLHTIMEDPGMAYFPYIASVLTVLFTLHKASIPTMKIALRTSRCSYKVIKYCIVSIFNTLLKLAGYKEQITTKDEIEKQMDRVVKEMRRQLEMIDKLTTREIEQVELLKRIHDMLIIKPVDKIDMSQEFNQRQFKTLNEWAEGENPYEPKEVTASL", - "output": "extracellular region ; host caveola ; host cell rough endoplasmic reticulum membrane ; membrane ; metal ion binding ; monoatomic ion channel activity ; toxin activity ; induction by virus of host autophagy ; pore formation by virus in membrane of host cell ; protein complex oligomerization" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MSIGTDAETKKKIIAEYAKTEGDTGSPEVQIALLSHRISHLTEHLKQHKHDHHSRRGLLLLVGQRRRLLNYLQKTEIERYRSIVERLGLRR", - "output": "cytoplasm ; ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MKLPIYLDYSATTPVDPRVAEKMMQFLTLDGTFGNPASRSHRFGWQAEEAVDIARNQIAELVGADPREIVFTSGATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQSNGIISLQALEAAMREDTILVSIMHVNNEIGVVQDIEAIGEMCRARGIIYHVDATQSVGKLPIDLSKLKVDLMSFSGHKIYGPKGIGALYVRRKPRIRIEAQIHGGGHERGMRSGTLPVHQIAGMGEAYRIAKEEMASEMARLRTLRDRLWNGVKDMEEVYLNGSLENGVPNILNVSFNYVEGESLIMALKDLAVSSGSACTSASLEPSYVLRALGMTDELAHSSIRFSLGRFTTEEEIDYTIQLVRKSIGRLRDLSPLWDMFKQGVDINSIEWAHH", - "output": "cytoplasm ; 2 iron, 2 sulfur cluster binding ; cysteine desulfurase activity ; metal ion binding ; pyridoxal phosphate binding ; cluster assembly" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MKPLASLRDIKTRINATKKTSQITKAMEMVSTSKLNRAAKREIVRSYMEKIQEVVANVASRGRSHPMLVSRPVKKTGYLVITSDRGLAGAYNSNVVRLVYPKRSKNAMLPPDEYAIIVIGRVGLSFFRKRNMPVILDITRLPDQPSFADIKEIARKTVGLFADGTFDELYMYYNHYVSAIQQEVTERKLLPLTDFLAENKQRTVYEFEPSQEEILDVLLPQYAESLIYGALLDAKASEHAARMTAMKNATDNANDVIRTLTLSYNRARQAAITQEITEIVAGRNALQ", - "output": "plasma membrane ; proton-transporting ATP synthase complex, catalytic core F(1) ; ATP binding ; proton-transporting ATP synthase activity, rotational mechanism ; proton motive force-driven plasma membrane ATP synthesis" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MLTVALSKGRLLKDFIKFLERNNNHVWADAIIHRERKLQITADSIKFILVKGSDVPTYVEEGIADIGITGSDILKERPNRNINNYIDLPFGECHFSVAAKPNVTNIQRVATTYVKTTRDYFNQKGTDISIIQLSGSVELAAVVDMVDAIVDIVQTGTTLKSNGLEEREQIGEINARLITNKHSFFSKSKAIENFIQQLGVSIHAQ", - "output": "cytoplasm ; ATP binding ; ATP phosphoribosyltransferase activity ; histidine biosynthetic process" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MGPIGAEADENQTVEEMKVEQYGPQTTPRGELVPDPEPELIDSTKLIEVQVVLILAYCSIILLGVIGNSLVIHVVIKFKSMRTVTNFFIANLAVADLLVNTLCLPFTLTYTLMGEWKMGPVLCHLVPYAQGLAVQVSTITLTVIALDRHRCIVYHLESKISKRISFLIIGLAWGISALLASPLAIFREYSLIEIIPDFEIVACTEKWPGEEKSIYGTVYSLSSLLILYVLPLGIISFSYTRIWSKLKNHVSPGAANDHYHQRRQKTTKMLVCVVVVFAVSWLPLHAFQLAVDIDSQVLDLKEYKLIFTVFHIIAMCSTFANPLLYGWMNSNYRKAFLSAFRCEQRLDAIHSEVSVTFKAKKNLEVRKNSGPNDSFTEATNV", - "output": "cilium ; non-motile cilium ; plasma membrane ; calcium channel regulator activity ; neuropeptide Y receptor activity ; peptide YY receptor activity ; signaling receptor activity ; adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway ; cardiac left ventricle morphogenesis ; locomotory behavior ; outflow tract morphogenesis" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MKHWKRRSSAVFAIVLQVLVLLLPDPAVAMTMEQFLTSLDMIRSGCAPKFKLKTEDLDRLRVGDFNFPPSQDLMCYTKCVSLMAGTVNKKGEFNAPKALAQLPHLVPPEMMEMSRKSVEACRDTHKQFKESCERVYQTAKCFSENADGQFMWP", - "output": "extracellular region ; dibutyl phthalate binding ; diphenyl phthalate binding ; odorant binding ; pheromone binding ; courtship behavior ; olfactory behavior ; response to ethanol ; response to pheromone ; sensory perception of smell" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MPYRKYREKKYETKYREAFKVFQEKIGITFTDEKLLIQAFTHSSYVNEHRKKPHEDNERLEFLGDAVLELTVSQYLFQKYPTMSEGELTKLRAAIVCEPSLVRFANELSFGGLVLLGKGEEMTGGRERPALLADVFEAFIGALYLDQGLETVWGFLKEIVYPKINEGAFSHVMDYKSQLQELIQRDGSGNIEYQILQEKGPAHNREFVSRVTLNNVALGLGSGKSKKEAEQQAAAEALKKLKEQL", - "output": "cytoplasm ; metal ion binding ; ribonuclease III activity ; rRNA binding ; mRNA processing ; rRNA processing ; tRNA processing" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MASNSAFSLFLILLIITQCLSVLNAAKDFDFFYFVQQWPGSYCDTKQSCCYPTTGKPAADFGIHGLWPNNNDGTYPSNCDPNSPYDQSQISDLISSMQQNWPTLACPSGSGSTFWSHEWEKHGTCAESVLTNQHAYFKKALDLKNQIDLLSILQGADIHPDGESYDLVNIRNAIKSAIGYTPWIQCNVDQSGNSQLYQVYICVDGSGSSLIECPIFPGGKCGTSIEFPTF", - "output": "extracellular region ; extracellular space ; ribonuclease T2 activity ; RNA binding ; RNA endonuclease activity ; RNA catabolic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "IIFSMWLLFSFSESTEYIAGDSESSWKVNFPSREALIDWATRHQFTYSDTVVNEDEDHDCNTKIHSKLGDMVVTKRPLVLPPLITLPLSPSPAPAPNTSGAAAGCGFMAFLEVSVAMLMFLIWL", - "output": "nodulation" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "VPIQKVQDDTKTLIKTIVTRINDISHTQSVSSKQKVTGLDFIPGLHPILTLSKMDQTLAVYQQILTSMPSRNMIQISNDLENLRDLLHVLAFSKSCHLPWASGLETLDSLGGVLEASGYSTEVVALSRLQGSLQDMLWQLDLSPGC", - "output": "extracellular space ; hormone activity ; peptide hormone receptor binding ; activation of protein kinase C activity ; adult feeding behavior ; bone growth ; cellular response to leptin stimulus ; energy reserve metabolic process ; intestinal absorption ; leptin-mediated signaling pathway ; lipid metabolic process ; negative regulation of appetite ; negative regulation of appetite by leptin-mediated signaling pathway ; negative regulation of autophagy ; negative regulation of glucose import ; phagocytosis ; positive regulation of interleukin-12 production ; positive regulation of interleukin-6 production ; positive regulation of interleukin-8 production ; positive regulation of MAPK cascade ; positive regulation of p38MAPK cascade ; positive regulation of phosphatidylinositol 3-kinase signaling ; positive regulation of protein kinase B signaling ; positive regulation of receptor signaling pathway via JAK-STAT ; positive regulation of T cell proliferation ; positive regulation of TOR signaling ; positive regulation of tumor necrosis factor production ; prostaglandin secretion ; regulation of angiogenesis ; regulation of bone remodeling ; regulation of brown fat cell differentiation ; regulation of cell cycle ; regulation of cytokine production involved in inflammatory response ; regulation of endothelial cell proliferation ; regulation of natural killer cell activation ; regulation of natural killer cell mediated cytotoxicity ; regulation of natural killer cell proliferation ; regulation of nitric-oxide synthase activity ; response to insulin ; sexual reproduction ; T cell differentiation ; tyrosine phosphorylation of STAT protein" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MTAVIALVGRPNVGKSTFFNRLTRTREALVADLPGLTRDRHYGTAQFEGRQYLVVDTGGFEPEEREGLVAAMAAQTRLAITEADAICFLVDAKEGLSTQDAEIAQELRRGGKPIYLVVNKMDAKGAVSELPEFYRLGLGTPYTISAAHGHGVEPLLEAIFSDLPTSEDDTADAARKGPRIAMLGRPNVGKSTLVNTMLGEKRVLVFDEPGTTRDSIRIPYERQGKPYVMIDTAGMRRRARVGEGLEKLSVLKTLSALREADVVLLVLDARLGIAEQDAHLVGVAVELGRPIVVVVNKWDGMTPEERKAVKQELERRLDFIRYAPVYTISALHGTGVGDLYKSIDQLWIDSRRHFSTAELNRALADVIETHQPPMVGGRRIKLRYCHQGGENPITLVFHGNQLTRLPGTYKRYLESAFRRALHLEAVPLRLVFRQGENPYDPQPKNGRQH", - "output": "GTP binding ; ribosome biogenesis" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MIGILKKVFDVNQRQIKRMQKTVEQIDALESSIKPLTDEQLKGKTLEFKERLTKGETVDDLLPEAFAVVREAATRVLGMRPYGVQLMGGIALHEGNISEMKTGEGKTLTSTLPVYLNALTGKGVHVVTVNEYLAQRDASEMGQLHEFLGLTVGINLNSMSREEKQEAYAADITYSTNNELGFDYLRDNMVLYKEQCVQRPLHFAIIDEVDSILVDEARTPLIISGQAQKSTELYMFANAFVRTLENEKDYSFDVKTKNVMLTEDGITKAEKAFHIENLFDLKHVALLHHINQALRAHVVMHRDTDYVVQEGEIVIVDQFTGRLMKGRRYSEGLHQAIEAKEGVEIQNESMTLATITFQNYFRMYEKLSGMTGTAKTEEEEFRNIYNMNVIVIPTNKPIIRDDRADLIFKSMEGKFNAVVEDIVNRHKQGQPVLVGTVAIETSELISKMLTRKGVRHNILNAKNHAREADIIAEAGMKGAVTIATNMAGRGTDIKLGDDIKNIGLAVIGTERHESRRIDNQLRGRAGRQGDPGVTQFYLSMEDELMRRFGSDNMKAMMDRLGMDDSQPIESKMVSRAVESAQKRVEGNNYDARKQLLQYDDVLRQQREVIYKQRQEVMESENLRGIIEGMMKSTVERAVALHTQEEIEEDWNIKGLVDYLNTNLLQEGDVKEEELRRLAPEEMSEPIIAKLIERYNDKEKLMPEEQMREFEKVVVFRVVDTKWTEHIDAMDHLREGIHLRAYGQIDPLREYQMEGFAMFESMIASIEEEISRYIMKAEIEQNLERQEVVQGEAVHPSSDGEEAKKKPVVKGDQVGRNDLCKCGSGKKYKNCCGIGK", - "output": "cytoplasm ; plasma membrane ; ATP binding ; metal ion binding ; protein-exporting ATPase activity ; intracellular protein transmembrane transport ; protein import ; protein targeting" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MFNTHKVEIEWGGRPLTLETGKIARQADGAVLATYGETAVLATVVSAKEPKPGQDFFPLTVNYQEKTYAAGKIPGGYFKREGRPSENETLVSRLIDRPIRPLFVDGYKNDTQVVITVLQHDLENNPDILSMVAASAALTISGVPFMGPISGARVGYIDGEYVLNPNIDEMPESKLDLVVAGTSEAVLMVESEAQELPEDVMLGAVMFGHKSFQPVIDAIIKLAEVAAKEPRDFQPEDLSELEAKVLAVVENDLREAYKITEKQARYAAVDAAKAKAKEHFFPEGVEETEMSAEQFATIFKHLQAKIVRWNILDTGNRIDGRDLSTVRPIVSEVGILPRTHGSALFTRGETQAIVVATLGTGEDEQMIDALTGTYKESFMLHYNFPPYSVGETGRMGSPGRREIGHGKLAWRAIHPMLPAAEQFPYTIRAVSEITESNGSSSMATVCGTSLALMDAGVPIVRPVAGIAMGLIKEGERFAVLSDILGDEDHLGDMDFKVAGTEFGITSLQMDIKIDGITEEIMKVALEQAKGGRVHILGEMAKAISSSRAELGEFAPRIEVMNIPTDKIRDVIGSGGKVIREIVEKTGAKINIEDDGTVKIASSNGKEIEAAKKWIHSIVAEPEVGEIYEGTVVKTADFGAFVNFFGPRDGLVHISQLAADRVAKTTDVVKEGQKVWVKLMGFDERGKVRLSMKVVDQETGKEIVAEKKKEEVDAE", - "output": "cytoplasm ; magnesium ion binding ; polyribonucleotide nucleotidyltransferase activity ; RNA binding ; mRNA catabolic process ; RNA processing" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MKPSIVAKLEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMMLDDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGSGDRSDRNRTYNFPQGRVTDHRINLTLYRLDEVMEGKLDMLIEPIIQEHQADQLAALSEQE", - "output": "cytoplasm ; translation release factor activity, codon specific" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MPTLRFPFHLANHNKDAAINILIIFISIGSIIFNVNYFHTTIVKNGQIINQPTNAFQSDFSLAALWRNENHAGVKDANPVAVNQETPKLSIALNGIVLTSNDETSFVLINEGSEQKRYSLNEALESAPGTFIRKINKTSVVFETHGHYEKVTLHPGLPDIIKQPDSESQNVLADYIIATPIRDGEQIYGLRLNPRKGLNAFTTSLLQPGDIALRINNLSLTHPDEVSQALSLLLTQQSAQFTIRRNGVPRLINVSVGELTGMNGLRHERTQ", - "output": "plasma membrane ; type II protein secretion system complex ; hydrolase activity ; protein secretion by the type II secretion system" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MIQQESQLKVADNTGAKKVKCFKVLGGSRRRYATVGDVIVCSVRDVEPNSSIKKGDVIKAVIVRTRRHITRKDGSTLKFDTNSCVIIDDKGNPKGTRIFGPVAREIRDRGFIKISSLAPEVI", - "output": "large ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MYYPLLSIALGSVLGAWLRWFLGLKLNPIYPQIPLGTVTVNLVGGFIIGFAMAYFAHSDLSPNYKLFVITGFCGALTTFSTFSIEIVTLLQSGKWGMAMLAISIHLIGSLIFTCLGLATYYWVAGH", - "output": "plasma membrane ; fluoride transmembrane transporter activity" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MYRPEKISIRKVPMQREDLIQSMFAPPDAPPVRWRIAPSLVDYPEAVETMEREAAAIADGTADELVWLVEHPPLYTAGTSANAADLVMPDLLPVFATGRGGEYTYHGPGQRVVYVMLDLKRRRQDVRGFVAALESVIIATLDSMNVKGERREDRVGVWVRRPEKPPLMDGSMAEDKIAAIGIRLRKWVSFHGLSLNVDPDLEHFGGIVPCGIRGYGVTSLVDLGLPVMMADVDIRLREAFERVFGPTRTENE", - "output": "cytoplasm ; lipoyl(octanoyl) transferase activity ; protein lipoylation" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MSSRHRLDLDGSGRGDRRRSPNRRSRSRSRSPHRRSSPDRKRQIGAVGNMKIQINPYNNQPFSNRYWAIWEKRSQLPVWEYKEKFMELLRNNQCITLVGETGSGKTTQIPQWAVEFMKQQQQGQPPGQARLVACTQPRRVAAMSVATRVAEEMDVVLGQEVGYSIRFEDCISERTVLKYCTDGMLLREAMNSPLLDKYKVLILDEAHERTLATDILMGLIKEIVRNRADIKVVIMSATLDAGKFQRYFEDCPLLSVPGRTFPVEIFFTPNAEKDYLEAAIRTVIQIHMVEEVEGDILLFLTGQEEIEEACKRIDREIQALGADAGALSCIPLYSTLPPAAQQRIFEPAPPNRPNGAISRKCVISTNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISKASAMQRAGRAGRTKPGKCFRLYTETAYGSEMQDQTYPEILRSNLGSVVLQLKKLGTEDLVHFDFMDPPAPETLMRALELLNYLQAINDDGELTELGSLMAEFPLDPQLAKMLITSTELNCSNEILSITAMLSVPQCWVRPNEMRTEADEAKARFAHIDGDHLTLLNVYHSFKQNQEDPQWCYDNFINYRTMKTADTVRTQLSRVMDKYNLRRVSTDFKSRDYYLNIRKALVAGFFMQVAHLERSGHYVTVKDNQLVNLHPSTVLDHKPEWALYNEFVLTTKNFIRTVTDVRPEWLLQIAPQYYDLDNFPDGDTKRKLTTVMQTLQRNAGRGY", - "output": "spliceosomal complex ; ATP binding ; ATP hydrolysis activity ; helicase activity ; RNA binding ; RNA helicase activity ; mRNA processing ; RNA splicing ; rRNA processing" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MRILQVSAELFPLLKTGGLADVAGALPLALMAAGQDARVLLPGFPAILAGVRELAPVAEFTAPWGPERFGLRAGRIAIDGAAAPITAYVIDAPVLYDRPGNPYEDATRQPYGDNHRRFALLGWAAAQLAQGLDPAWQPEVVHAHDWHAGLAPAYLHFAREAGLTRTGSVFTVHNLAYQGISAPWNFADLGLPAPAFHMNGLEYHGQVSFMKGGLYFADRLTTVSPTYAREIQTPEQGFGLDGLLRLRGGVLTGILNAVDDEVWNPATDSALVQGYHTPDGRHMAGKARCKAVLQHQLGLAERPDAPLFILVSRLTEQKGLHLVLGGLDTLLAEGGQLALLGSGEAGLEQAFRERAAAAPRAVSVTIGYNETLAHQLFGGGDVTLVPSLFEPCGLTQMYGLKYGSLPLVRRVGGLADTVVDCTLEDMASGHATGFVFDRFDAADYDRALRRAFALYQRAPDWRRVRGNAMRRPADWASAAGQYIEVYRQALESAGT", - "output": "alpha-1,4-glucan synthase activity ; glycogen (starch) synthase activity ; starch synthase activity ; glycogen biosynthetic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MEHSLNSLNNFDFLARSFARMHAEGRPVDILAVTGNMDEEHRTWFCARYAWYCQQMMQARELELEH", - "output": "negative regulation of bacterial-type flagellum-dependent cell motility ; negative regulation of single-species biofilm formation" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MAIWSTRKVGLDNLRISQLLNFRGFDPSALVTKLTDPFSLQRLLTLNQSRSPPMVNRLKDSRKRRAAVVCRIRDTRDGWFSSLSSLTSSVIGLFQISVKLPHEPYKIQVMVSSQEQVQDVRQSIVELPSTFQYTCFHLEFNGKRINDFVELSEVEGLKADSEIVLVEDPYTEKEARMHVVRFRDLVGAAGDRSDNLHGLNAGLSLHDAVTAEAATDDVKEHSLSKYDIAASPSLETILPRAEAPLPKTVKSISLSAWNPPPYHLRQKGHLLYLQVTTNEGEQFQITSHVSGFYVNKCSNHKFDPLPRTTPKKVSAHSLLTLISKLSPSFNSAFEALQESNNKKDLLTTFPFQNAIPNSPWLVTPPSSNPNSHQADITRSQESYLVSGVDNAETLRDWNEEFQTTRELPRETVQDRVFRERLTSKLFADYNEAAARGAVLVARGEVAPLNPTEERDAQIFVYNNIFYSFGADGVGTFVSEGGDEAARVAVGKDVLGIKAVNQLDINGLFTPGTVVVDYLGKRIVGQSIVPGIFKQREPGEHQIDYGGVEGKDVVATHPDFVSVFEKMSKALRIKKHPVWDKEGKRHDLEGSVETKGLLGTDGRKYVLDLYRVTPLDVVWQEEPGSEDYPHRMSVLRLELVEAYWRSKMSQYVKAEVERRRAAKAQEDAANKEQPSETTESKEGESEEKAEEALDQERVDISGFQLALNPDVCSGQVPQTEEEKKQWAEDEKEVRDACEFLRSKVIPELIQDLHDGDVGFPMDGRSLSQLLHKRGINIRYLGKLAQLSKEKGSRLEALTTLLVQEMIARAFKHIANRYLRNVPAPFVASCVAHLLNCLLGADVNPKPSAEIDASLREIYPEGDFSFEKVTPETLRAEVEKQVTVRYRYTLETEWFSSLRHLQLLRDIAIKLGLQLGARDYAFTKAQLPAKVPVANGVNGASHDESKKKKKKGGDSKSPSRAVVEEKPVVSIVPDDIVNVVPLVKDASPRSSLAEEALEAGRISLMQNQKQLGQELILESLSLHEQIYGILHPEVAKLYHQLSMLYYQTDEKEAAVELARKAVIVTERTLGVDSADTILAYLNLSLFEHASGNTKTALVYIKHAMDLWKIIYGSNHPDSITTMNNAAVMLQHLKQYSDSRKWFEASLAVCESLFGKQSINTATILFQLAQALALDQDSKGAVGKMRDAYNIFLNQLGPNDRNTKEAETWLEQLTQNAVSIAKHAKDIQARRLRRINMNPRVTTLGTKVQPQVGQTAPEASGAKGAANASMDSRSIDELLKFIEGGDATSSRSKQKKRAAASNPKLRGSKKSSA", - "output": "cytoplasm ; mRNA binding ; intracellular distribution of mitochondria" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MKTWLLALYDVLSRYKNVWNETWKIRKQLDSPVREKDENEFLPAHLELIETPVSNAPRFVSYSIMLFLTLAIIVSIFSNVEIIATASGKFALSGRSKEIKPIENSLVKHIFVKEGEYVKKGELLLKLTALGAEADTLKTKTSLSQAKLEEFRYKSLLEAVEKDQLPILDFSKIDLPFMTENDQKRVTLLIEEQFSTWQKQRHQKTLNLNKKEAEKLSYLARIKKYEGLINTEQVRLDDFRALYKEHAIAKHTVLDEENKYQDAINELEVYKASLMQVENEVLLAKEEQELVTQLFKNDILDKLKQATDNVNLLTFELDKNNQRQQVSEIRAPVSGTVQQLKVHTIDGVVTTAETLMVVVPEEDSLEVTALIQNKDIGFVKEGQEVVIKVEAFPYTRYGYLTGKVKNITLDAIEHPKLGLVFNTIIELDKKTLSTEEKEIPLSAGMEITAEIKTGMRSVISYLLSPLEESIDKSLRER", - "output": "plasma membrane ; protein secretion" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MTSIVLFCRPGFEKECGAEIQEKAAWNEMYGYLELKINQGLVFFHLHESAHGEALMNKLPLKRLIFARQWFVTVTDKIDLPDYNRVEAITEALGNDWQYSDLRMEMADDNDGKSLSKFCRKLSVPLRQALRKNKVLTQKGNNSADDPEGAILHALFLSGQEVILGFSLARNSSPHVMGIPRLKFPSASPSRSTLKLDEAFLHFIPRDEWDERLTSGMNAVDLGSAPGGWTYQLVRRGMMVTAIDNGLMAESLMETGQVKHKMMDGFKYVPLKQNVYWLVCDMIEKPQRVAKLMSEWLLHGHCKEAMFNLKLPMKGRYQQVTNDLQTIKDAFTKHNVKYELYAKHLYYDREEVTVHARLLSPAPLRAKE", - "output": "cytoplasm ; S-adenosylmethionine-dependent methyltransferase activity ; methylation ; rRNA processing" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MNTKLTVLCFLGIVTIVSCGWMSEKKVQGILDKKLPEGIIRNAAKAIVHKMAKNQFGCFANVDVKGDCKRHCKAEDKEGICHGTKCKCGVPISYL", - "output": "extracellular region ; potassium channel regulator activity ; toxin activity ; defense response to bacterium ; defense response to fungus ; killing of cells of another organism" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MDYLDLGPYSSASGTVRLPGSKSISNRVLLLAALAEGDTTITNLLDSDDTRVMLDALGKLGVKLARDGDTCVVTGTRGAFTAKTADLFLGNAGTAVRPLTAALAINGGDYRVHGVPRMHERPIGDLVDGLRQIGAQIDYEQNEGFPPLRIRPATISVDAPIRVRGDVSSQFLTALLMTLPLVKAKDGRSIVEIDGELISKPYIDITIRLMARFGVNVEREGWQRFTVPAGVRYRSPGRIMVEGDASSASYFLAAGALGGGPLRVEGVGRASIQGDVGFAHALMQMGANVTMGDDWIEVRGIGHDHGKLEPIDMDFNLIPDAAMTIAVAALFANGTSTLRNIASWRVKETDRIAAMATELRKVGATVEEGADYLVVTPPAALTPNAAIDTYDDHRMAMCFSLVSLGGVPVRINDPKCVGKTFPDYFDRFAALAKA", - "output": "cytoplasm ; 3-phosphoshikimate 1-carboxyvinyltransferase activity ; amino acid biosynthetic process ; aromatic amino acid family biosynthetic process ; chorismate biosynthetic process" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MAFRKSNVYLSLVNSYLIDSPQPSTINYWWNLGSLLGLCLVIQILTGIFMAMHYSSNIELAFSSVEHIMRDVQYGWLLRYMHANGASFFFICMYMHIAKGLYYGSYRSPRVTVWIVGVIIFVLTMAAAFLGYCCVYGQMSHWGATVITNLFSAIPFVGQDIVQWLWGGFSVSNPTIQRFFALHYLVPFIIAALVVMHFMALHVHGSSNPLGITGNMDRIGMHGYFIFKDLITVFVFLIFFSLFVFFSPNTLGHPDNYIPGNPLVTPASIVPEWYLLPFYAILRSIPDKLLGVITMFAAILVLLVLPITDRSVVRGNTFKVLSKFFFFLFIFNFLLLGQIGQLHIEPPFVLMGQIATFLYFAYFIIIVPIISTIENVLFYIGRVNN", - "output": "mitochondrial respiratory chain complex III ; metal ion binding ; ubiquinol-cytochrome-c reductase activity ; mitochondrial electron transport, ubiquinol to cytochrome c" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MADAEASAELPEEARPDGGTLRVLRDMASRLRIHSIRATCSTSSGHPTSCSSSAEIMSVLFFYIMRYKQSDPENPDNDRFVLAKRLSFVDVATGWLGQGLGVACGMAYTGKYFDRASYRVFCLMSDGESSEGSVWEAMAFASYYSLDNLVAIFDVNRLGHSGALPAEHCIDIYQRRCEAFGWNTYVVDGRDVEALCQVFWQASQVKHKPTAVVAKTFKGRGTPSIEDAESWHGKPMPRERADAIIKLIESQIETSRNLDPQLPIEDSPEVNITDVRMTSPPDYRVGDKIATRKACGLALAKLGYANDRVIVLDGDTKYSTFSEIFNKEYPERFIECFMAEQNMVSVALGCASRGRTIAFASTFAAFLTRAFDQIRIGGLSESNINIIGSHCGVSVGEDGASQMALEDIAMFRTIPKCTIFYPTDAVSTEHAVSLAANAKGMCFIRTTRPETMVIYTPQERFEIGQAKVLRHCVSDKVTVIGAGITVYEALAAADELLKQDIFIRVIDLFTIKPLDVTTIISSAKATEGRIITVEDHYPQGGIGEAVCAAVSMDPDIQVHSLAVSGVPQSGKSEELLDMYGISARHIIVAVKCMLLN", - "output": "cytosol ; metal ion binding ; transketolase activity" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MDTMQGESNIVEIWTDGGCKPNPGPGGWAAILLYRGTEKELSGFDPETTNNRMELTAAAAALEALTRPCKVVLNTDSEYVRNGITRWKDGWVRRNWRNASGDPVANMDLWRRLLDAAARHEIDWRWVRGHAGNPMNERADQLATKARMEG", - "output": "cytoplasm ; magnesium ion binding ; nucleic acid binding ; RNA-DNA hybrid ribonuclease activity ; RNA catabolic process" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MRIFGIILLSFCLCFASILSLNEAFNVKSNSYNNSISIDIELGKDIYLYSNKLKLYINEKDISSLINLPQSSTRGNENVYYQKLNLALPNLLLERFAKNTTNLIKLEFQGCSEQGLCYNPQTWYFDLISKKDAFEISKPYKAQKTDKKTKIESEESSIANFLATDNFFWILLSFFGYGLLLSLTPCILPMIPILSSLIVAKSNAKFSKKYSFFLSFIYVFFMSLAYAIAGVIASFLGASIQGILQKPIILILFALIFIAFAFAMFGAFRFELPLRFQTFIHKKSEKGKGVVGIAIMGFLSALIVGPCVAAPLAGALIYIANTGNALLGGSALFIMSFGMGIPLLFIGLGLGFIKPGFWMEKVKIFFGFVMLAMAIWILSRIIEENYILIAYGILGVFFSVFMGIFEKSFTIISKIKKSILILILAYSLSIFLGGLFGAKNFLNPLNFNTISASKHALSYDYINNFEQLKQEIQTNTKPIMLDFTASWCENCKLLDELTFSDERIIQKMQNYKLIKVDVSENNNEQIKTMKEFNVFGPPVLIFFENGKEKLKITGFISADDLLKKIEP", - "output": "plasma membrane ; electron transfer activity ; protein-disulfide reductase (NAD(P)) activity ; cytochrome complex assembly" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MAAGKFASLPRNMPVNHQFPLASSMDLLSSKSPLVERRADAYQDVSIHGTLPRKKKGPPPIRSCDNFSHVGTLPHSRSPRHHSPLIQDVIQEQPLQDWKGEAFTFRDQHLLDPTLEYVKFSKERHVMDRTPERLKKELEEELLLSSEDLRSHAWYHGRIPRQVSENLMQRDGDFLVRDSLSSPGDFVLTCQWKNLPQHFKIRRTVVRLSEAYSRVQYQFEMESFDSIPGLVRCYVGNRRPISQQSGAIIFQPVNRTVPLRCLEERYGASSPDRAHEGSLTEGRPDAAKRLSLTVGGTQAREQGLPRGNLLRNKEKSGSQPACLDHMQDRRALSLKAHQSESYLPIGGKLTPQSPSVGTSPCPNSPVFRTGSEPTLSPAVVRRVSSDARPGEALRGSDSQLCPKPPPKPCKAPLLKAPPSPSIWLNSEANYCELNPALAASYDGASRLPFCAQDSYVELLTAKQNGGLGTRNSDTSYLILDDDDRTRPWKPPPAPGDTVGEDQDTFVMPLLETTSSFKPNDFESKLLPPENKPLETSMLKRAKELFTNSDPKVIAQHLLSVDCKVARILEVSEEMRKNMGVNSGLELITLPYGHQLRLDIIERHNTMAIGIAVDILGCTGSLEDRAATLNKIIQVAVELKDSMGDLYSFSAIMKALEMPQITRLEKTWTALRHQYTQTAILYEKQLKPFSKVLHEGRESTCVPPNNVSVPLLMPLVTLMEREAVTFEGTDMWEKNDESCEIMLNHLATARLMAEAADSYRMNAERILAGFQPDEEMSEVFKTEFQMRLLWGSKGAQVNQTERYEKFNQILTALSRKLEPPPVKQMEF", - "output": "cytoplasm ; focal adhesion ; membrane ; guanyl-nucleotide exchange factor activity ; phosphotyrosine residue binding ; endothelin receptor signaling pathway ; insulin receptor signaling pathway ; positive regulation of DNA replication ; positive regulation of epidermal growth factor receptor signaling pathway ; positive regulation of GTPase activity ; positive regulation of MAPK cascade ; positive regulation of peptidyl-serine phosphorylation ; small GTPase mediated signal transduction" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MRLSDFDFELPEELIAQHPLAQRQASRLMVLNRVTQQLQLAQFADIADWFRPGDVLVVNDTRVIPARLIGRKQTGGRIEVFLVRRLPGVEEVWACLTKCSKSPRPGTRLILGEGLEGTVVEGGEPPYRHVRFSFQGDFSQVLEQVGRIPLPPYIRREATPDDRSRYQTVFAREAGAVAAPTAGLHFTDEILDVLRAKGVEIQPLTLHVGLGTFLPMRTDDITEHRMHEENYFVPEGTAAAVNRAKDDGRRVIALGTTSTRTLEYAVDEQGRLQAGAGTCDLFIRPGFKFRIVDGLVTNFHLPCSTLLVLVAALAGREFILEAYQRAVAEKFRFFSYGDCMLIL", - "output": "cytoplasm ; S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity ; queuosine biosynthetic process" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MEESQSKQESSTKVAQHEGQEDVDPTFKTKKLMEVELMKHRVQLERNLKLRTFPGARTKQVKEALYPLLTWSSKSKNLFQNFTKLLLFKKLCQRGSENLVRESWYPCVPEEEAHMIDIQDLFGPNLGTQKKPQLVIIEGAAGIGKSTLARLVKRAWKEGKLYRNDFHHVFFFSCRELAQYEQLSLAELIVQGQEVPTAPIRQILSHPEKLLFILDGIDEPAWVLADQNPELCLHWSQTQPVHTLLGSLLGKSILPGASFLLTTRTTALQKFIPSLEQPCQVEVLGFTLFERKNYFYKYFGKKKGGVTTFTLVKSNSALLTLCEVPWVCWLVCTCLKKQMEQGGELSLTSQTTTALCLKYLSLTIPGQHMRTQLRDLCSLAAEGVCQRRTLFSESDLCKQGLDEHAIASFLKIGVLQKQASSLSYSFAHLCLQEFFAAMSYILDDSEERHADMKNDRIVETLVERYGRQNLFEAPTVRFLFGLLSKEELKKIEKLFSCSLHGKTKLKLLWHILGKSQPHQPPCLGLLHCLYENQDMELLTHVMHDLQGTIVPGPDDLAHTVLQTNVKHLVIQTDMDLMVVTFCIKFCCHVRSLQLNRKVQQGHKFTAPGMVLYRWTPITDASWKIFFSNLKLARNLEELDLSGNPLSYYAVHSLCTTLRKRGCQLKTLWLVECGLTSTYCSLLASVLSARSSLTELDLQLNDLGDGGVKMLCEGLRNPACNLSILWLDQASLSDQVIAELRTLEAKNPKLLISSTWKPHVMVPTMNMDKEEVGDSQALLKQQRQQSGDKHMEPLGTEDEFWGPTGPVTTEVVDRERNLYRVQLPMAGSYHCPSTGLHFVVTRAVTIEIEFCAWSQYLDKTPLQQSHMVVGPLFDIKAEQGAVTAVYLPHFVALQEGIVDSSLFHVAHFQEHGMVLETPARVEQHYAVLENPSFSPMGILLRMIPAVGHFIPITSTTLIYYHLYLEDVTFHLYLVPNDCSIRKAIDDEEMKFQFVRINKPPPVDALYLGSRYIVSSSKLVEIIPKELELCYRSPGESQLFSEIDIGHMDSEIKLQIKDKRHMNLKWEALLKPGDLRPALPKIATAPKDAPSLLHFMDQHREQLVARVTSVDPLLDKLHGLVLSEDSYEVVRSETTNQDKMRKLFSLSRSWSWDCKDQFYQALKETHPHLVMDILEKLGGVSVKS", - "output": "canonical inflammasome complex ; cytoplasm ; cytosol ; NLRP1 inflammasome complex ; nucleoplasm ; nucleus ; ATP binding ; ATP hydrolysis activity ; cysteine-type endopeptidase activator activity ; double-stranded DNA binding ; double-stranded RNA binding ; endopeptidase activity ; enzyme binding ; protein domain specific binding ; protein self-association ; activation of cysteine-type endopeptidase activity involved in apoptotic process ; antiviral innate immune response ; cellular response to UV-B ; defense response to bacterium ; defense response to virus ; inflammatory response ; neuron apoptotic process ; NLRP1 inflammasome complex assembly ; pattern recognition receptor signaling pathway ; positive regulation of inflammatory response ; positive regulation of interleukin-1 beta production ; programmed necrotic cell death ; protein homooligomerization ; pyroptosis ; regulation of apoptotic process ; response to muramyl dipeptide ; self proteolysis ; stress-activated protein kinase signaling cascade" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MNTQLPSFIALYRALIATPSISANDGALDQSNERLITLLAGWLSDLGLRVEMQPVPNTRNKFNLLANYGEGAGGLMLAGHTDTVPFDEGRWTRDPFTLSEQDNRLYGLGTADMKGLFAFIIDTLRDIELHKLNKPLYILATADEETSMAGARYFAASTALRPDCCIIGEPTSLKPIRAHKGHLSEAIRITGQSGHSSDPARGVNAIEIMHNAIGHLLTLRNTLQQRYHNPAFNIPYPTMNLGHIHGGDAANRICACCELHLDMRPLPGMTLNDLNELLNQALTPIAAQWSGRLRIEHLHPPIPGYECPRHAPLVQAIEQLLGERAEAVNYCTEAPFLQEVCPTLVLGPGSIEQAHQPDEYLSTDFIVPTRTLLTQLIHHFCQR", - "output": "cytoplasm ; acetylornithine deacetylase activity ; zinc ion binding ; arginine biosynthetic process" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MGSLLSPEANAEVPREALSFHGNATGAQVHLDDQRSTARRRSTFHDGIVFSQRPVWPGERVALRVLRHEEGWCGGLRVGFTRLDPAQVAASCLPPFVCPDLEEQSPTWAALLPEGFVRAGNVVCFWVNRRGWLFAKVNAGRPLLLRKDVLVQGAPLWAVMDVYGTTKAIELLDPKANAWIRSGEPVPESEVISGEECVICFHNTANTRLMPCGHSHFCGSCAWHIFKDTARCPICRWQIEEVAVVSSLKAEEGS", - "output": "early endosome ; metal ion binding ; ubiquitin protein ligase activity ; innate immune response ; protein ubiquitination ; ubiquitin-dependent endocytosis" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MSLIEGDSIYNLFQTQDLGIDFASSIVPDSPNKFKKNANVFNNFQQQQQQIQQQNKQSNGLIYNNNNNNNNNNNNNNNNSSSSNNNNNSSSSNNNNNSNNNNQNHNNNNNNQNHNNIQHNNAQSQVYINHNSNGSQQEEQLFSIYLQPEKENELNNSYHDNVNNNNNNNNNNNNNNNNINLNHAQQQQQQHHLPHGQPHNNNNNNQFYQIKNPMEEIYSSNGIVPNQEPNKKVEYMNEPIKQNHYNIVPESIFDVPFGVSSQTMLNVPSTNNANNNNNNNNNNNNNNKNINFKQPIQPNQLIPIPPHSNQNNNISLNNNNSNSNSNPNNNNNNSNNISTQINNLNNNINNQNNQLNGSNNGKKKEEDKSIKKRKFISSTPVKGENGGTTLIPTTDGGFNMDEERHQKRQRRLVKNREAAQLFRQRQKAYIQDLEKKVSDLTGTNSEFRARVELLNSENKLIREQLLYLRNFVTQAVSFSFPKGGSNGTNSPSGVADQFLNSILPPGLNSPLPQGILPAGMNLQNPMIMSAIAEAASKNSTFRQNIQGNLLGTPIPSPQSSLTSNSGNNSPNKPLNNNNNNNNINNNNNNNPSSPNNNLNNNNNISPNSSTSHQVPYLPQNTPPQQSTPNQR", - "output": "nucleus ; cAMP response element binding ; DNA-binding transcription factor activity ; culmination involved in sorocarp development ; positive regulation of gene expression ; protein kinase A signaling ; regulation of sorocarp development ; sorocarp morphogenesis" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MKPRHKRALMIVAALAVIGIAALLILNALNSNIALYVTPSDVVAGKAPQGQAFRIGGLVKEGSLKRDGLTVHFVITDLVKDIPVSYTGILPDLFKEGKGAVIQGNLNPQGEFIASEVLAKHDENYMPPEAKHALEQAQKNGSAK", - "output": "plasma membrane ; heme binding ; metal ion binding ; cytochrome complex assembly ; protein-heme linkage" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MTNIRKSHPLMKIINNSLIDLPAPSNISSWWNFGSLLGICLALQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWVLRYLHANGASMFFICLYLHIGRGLYYGSYLYMETWNVGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTNLVEWIWGGFSVDKATLTRFFAFHFLFPFIISAMVMGHLLFLHETGSNNPTGIPSNMDMIPFHPYYTIKDILGLLVMIMSLLALVLFSPDMLGDPDNYSPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILIIIPLLHTSKQRSMTFRPLSQCMFWLLVADLLALTWIGGQPVEHPYIIIGQLASILYFLIITTLMPLAGLLENRLLKW", - "output": "mitochondrial inner membrane ; respiratory chain complex III ; metal ion binding ; ubiquinol-cytochrome-c reductase activity ; respiratory electron transport chain" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MIKATYSSAKDFYSLLSGLLKVTDEIILNFTEDSIFSRYLTDDKVLMVIFKIPKEYLEDYTIDKPLGIKININDLKKILGKAKSKSATVTLEETEAGLKVTVRDEKTGTRSNIYIKGEKTSIDQLTEPKVNLSVTFTTDGDVLKDIARDLSLVGEEVEISADENTVTLSTEEAGRTYKSLLKQDKPLKSLNVESPSKAVYSIEVLKDVFKVTSISQNVTVGFGNNIPMKIEVPTDSGGQLIFWIAPRL", - "output": "DNA binding ; DNA polymerase processivity factor activity ; DNA replication ; regulation of DNA replication" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MCLPSHLLSTWVLFMAAQSLGKTWLPNHCRSPIKAVCNFVCDCGDCSDETQCGFHGASTIPSTSFTCNFEQDSCGWQDISTSGYRWLRDRAGAVLHGPGPHSDHTHGTDLGWYMAVGTHSGKEPSTATLRSPVMREAAPTCELRLWYHIASRDVAELRLDLTHGVETLTLWQTSGPWGPGWQELAVNTGRIQGDFKVTFSATRNATHRGAVALDDVEFRDCGLPIPQARCPLGHHHCQNKACVEPHQLCDGEDNCGDRSDEDPLICSHHMATDFETGLGPWNQLEGWTRNHSAGSMVSPAWPHRDHSRNSAYGFFLISVAKPGTTAVLYSPEFQGSVSNNCSFTFYYYLHGSEASHFQLFLQAQGLNTPQVPVLLRSRHGELGTAWVRDRVDIQSAHPFRILLAGETGPGGVVGLDDLIMSSHCMLVPAMSTLQSSLSGPVPLALYPQTSIKLPQQTCEPGHLSCGDLCVPPEQLCDFQKHCAEGEDEHKCGTTDFESASAGGWEDISVGKLQWQWVEAQEKSKPAGDANRDAPGHFLSLQKAWGQLRSEARALTPALGPSGPHCELHMAYYFQSHPQGFLALVVVENGFRELLWQAPGGGSGSWTEEKIILGARRRPFQLEFVSLVDLDGPGQQGAGVDNVTLRDCNPMVTTESDQELSCNFERDSCSWHTGHLTDAHWHRIKSHGSQLDHTTGQGFFMFLDPTDPPARGQGALLLTRPQVPVVPKECLSFWYRLYGPQIGTLCLAMRREREEDILLWSRSGTHGNRWHQAWVTLHHQPEASTKYQLLFEGLRNGYHGTMALDDIAVRPGPCWAPKSCSFEDSDCGFSPGGWGLWTHQSNASGLASWGPWIDHTTGTAQGHYMVVDTSPNVLPKGHVAALTSEEHQPLSQPACLTFWYHMSVPNPGTLRVHVEESTRRQELSISAHGRSAWRLGSVNVQAEQAWKVVFEAVAAGVEYSYMALDDISLQDGPCPQPGSCDFETGLCGWSHLPWPSLGGYSWDWSSGATPSRYPQPSVDHTLGTEAGHFAFFETSVLGPGGQAAWLRSEPLPATTVSCLRFWYYMGFPEHFYKGELRVLLSSARGQLAVWYQGGHLRDQWLQVQIELSNSEEFQIVFEATLGGQPALGPIAIDDVQYLAGQQCKQPSPSQGEVAAPVSVPVAVGGALLFFMFLVLMGLGGWHWLQKQHCPGQRSTDAAASGFANILFNADHVTLPESITSNPQSPPDLA", - "output": "endosome ; Golgi apparatus ; membrane ; protein transport" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MRYNQFSYIPTSLERAAEELKELGFDLDLQKTAKVNLESFLRKLFFHYPDSDYPLSHLITKNDMDALSFFQSEQELSKEVFDLLALQVLGFIPGVDFTEADAFLDKLAFPIHFDETEIIKHIHHILATRCKSGMTLIDDLVSQGMLTMDNDYHFFNGKSLATFDTSQLIREVVYVEAPLDTDQDGQLDLIKVNIIRPQSQKPLPTLMTPSPYHQGINEVANDKKLYRMEKELVVKKRRQITVEDRDFIPLETQPCKLPIGQNLEIFSYINSYSLNDYFLARGFANIYVSGVGTAGSTGFMTSGDYAQIESFKAVIDWLNGRATAYTSHSKTHQVRADWANGLVCTTGKSYLGTMSTGLATTGVDGLAMIIAESAISSWYNYYRENGLVCSPGGYPGEDLDVLTELTYSRNLLAGDYLRHNDRYQELLNQQSQALDRQSGDYNQFWHDRNYLKNAHQIKCDVVYTHGLQDWNVKPRQVYEIVNALPSTINKHLFLHQGEHVYMHNWQSIDFRESMNVLLCQKLLGLANDFSLPEMIWQDNTCPQNWQERKVFGTSTIKELDLGQELLLIDNHYGEDEFKAYGKDFRAFKAALFKGKANQALVDILLEEDLPINGEIVLQLKVKSSENKGLLSAQILDYGKKKRLGDLPIALTQSSIDNGQNFSREPLKELPFREDSYRVISKGFMNLQNRNNLSSIETIPNNKWMTVRLPLQPTIYHLEKGDTLRVILYTTDFEHTVRDNSNYALTIDLSQSQLIVPIASN", - "output": "cytoplasm ; aminopeptidase activity ; dipeptidyl-peptidase activity ; serine-type peptidase activity ; proteolysis" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MTTIRDVAKHAKVSVATVSRVLNKKGYVSKEAEEAVLQAIKELNYQPSSVARSLYHKTSGMIGLLIPDISNPFFPELARAVEDVASTYGYTVVLCNTDEEIEKERKYLQALKQKYVDGVILTTSFLPYKEYEQLNIPMVALDRYVNENIPLVASQNKAGARLATEHLLEQGCQFIAHIRGPKGVTPAEDRYEGFKEVVEEQEVANIVVSADFHIDEAQKVTRALLETHPTIDGIFASSDVVAAGAMKAAHMMGKRIPDDLQIVGFDGIPLGNMLVPSLTTVEQPIYDLGAVSTRLLIKQIEKKPLDTYRYEIPTKLVVRETTKGGENSENA", - "output": "DNA binding ; regulation of DNA-templated transcription" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MGTVNVVNVAKKHQFSWYEKFYFWSIGKGLWITLKHFVKVAFFNKQVTIEYPDKKRQYSTRFRGMHSMKRDEQGRERCTACFCCMWICPANAIHIEAAEVTAERQHLHPEDKYAKKFEINLLRCIFCGLCEEACPKGAIYLDGTGEMAADNREDLFLTKERMMEKTGGPILGQRN", - "output": "plasma membrane ; 4 iron, 4 sulfur cluster binding ; iron ion binding ; NADH dehydrogenase (quinone) activity ; quinone binding" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MSAEHDQIRAVAWTGAGVRLLDQRRLPQEEIYWTIACVSDVAQAITKMVVRGAPAIGIAAAYGVVLAARARFSEAGSGWKQLLEADLCDLEAARPTAINLAWALARMQAIIQGLPDHRDPESALLVEARCIHEEDIAANRRMGELGTTLIEGSVGVLTHCNTGSLATGGFGTALGVIRHAYGKGRIEKVFADETRPWLQGARLTTWELLRDGIPVVLIADSVAPYLLGQGEVQWVIVGADRIAANGDTANKIGSYGLAVAARYHNVRFMVVAPTSTIDWNLSDGTRIPIEQRPPEEVLTLGGKAIATVGAEAYNPAFDVIPAHLIDAIVTERGVVRQPTHERMKALFG", - "output": "S-methyl-5-thioribose-1-phosphate isomerase activity ; L-methionine salvage from methylthioadenosine ; L-methionine salvage from S-adenosylmethionine" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MSAKLTLESIAKTFAETSIFAILFLIIVILNLGLLVFLAYQYRVYKKKQRANLTKQTYNNDYGQIVNLKQQNGAKIKELANLKDQLSELGQKFNTTLSEIINKPLVNVIDEYLDEQFKQAANFREAELNAVLDSNDQKTVFHKRLFNKFHFGVDKLANINVKNPLNLCWVDSASFTVIESDFRKLNGVGGINKKLLIEKLRIEDIIFTNIDKKYYEVQILSDSPVKVQKTVLTIRNILINDYVDNEKIESYAREANGYFNDHCKLIGKQVLERLNIFEISPKLHKFFGLLAFRYSFGQNVLSHCLETGFLTAYLALLVNFKPDVALKCGLYHDIGKADDENGKKNHTVTGAKIGDEFYFENDVKYTIANHHNKNVDNVYCRLTQIGDKLSAGRLGARSDSSVLFSQLKQELKQIVEETLAQFKTTILLGQSGRRLVIWLETNQHNNIIDNQQLTDLATTIKSKIVQNNITNRFPIKVVLRYNFEHSFDTKDKN", - "output": "plasma membrane ; RNA binding ; RNA endonuclease activity ; mRNA catabolic process" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MITKDKIRVRLFSFDVKILDQSAESIVRAVQKSKAQIKGPIPLPTKIKKYTVLRSPHVNKKSREQFEMRTHKRLIDILEPTSALMDSLMKLELPAGVEVDIKQ", - "output": "ribonucleoprotein complex ; ribosome ; structural constituent of ribosome ; tRNA binding ; translation" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MNFNVWNVKEMLSIPSGSGITKPSNWNNNQTDCSLSDSQFLFGSQFCPENSETLLPSLDAGACLRHPKQTQQNSVDSEPSIFIKYQAKPQLLGGDTKDESLFSLPLPVGKSKGLSKQFEEKKRRATDQSDSETLHSFVSHFPEVINKLQTSVEKTEENLSSRSQSILDSVETIAKTFQETARVQHDLMVESVRDKGSMEQAILEIQRTCAARQAEFMEMKSTLKNLEVLVVEQTKNLQQFCDNLSQLIVPGILEELKKFTSVPQVAGHLKDSTSQTSPSLTQSLHFTRQEKHPSEEPATWQAQEAPAGNPSTSSQRPGECGVWDEGAESGVFQKAALPTDGLHRGDGHVKNKTVPTYCKNWVMTTRSVSNHFSNLPSQRAGNGQGLMAQGASQRDVSKFEARVKNACPEYGPQSMCSFDSLEQSATEQKGRPCRKRRRGKKQQPQRSKRGGLLDRKQGQTSKAACAFIARHHCPQSPVCDPQGPLICWLTPRSSTKSTCHILGGTGETSQTARAAQGNLVQHSQRSSTDSSSQGDQQINWFSDLSLENLEPPQCKKGGTNLLCDPDFDSSDDNF", - "output": "condensed nuclear chromosome ; DNA recombination ; homologous chromosome pairing at meiosis ; meiotic DNA double-strand break formation ; oogenesis ; regulation of homologous chromosome segregation ; spermatogenesis" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MATLEDGTSEDRVANDEYKIWKKNTPFLYDLVMTHALEWPSLSVQWLPDVAKDNSDHTIHRLILGTHTSDEQNHLLISKICMPTDDAQFDASRYDTERSEYGGFGAVNGKVEPDIRINHEGEVNRARYMPQKSNIIATKSPHADVYIFDYLKHSAVPRDNTFNPLIRLKGHTKEGYGLSWNPNKEGLILSASDDQTVCHWDINANQNVAGELQAKDVFKGHESVVEDVAWHVLHDGVFGSVGDDKKLLIWDVRTSTPGHCIDAHSAEVNCLAFNPYSEFILATGSADKTVALWDLRNLRMKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDLSKIGEDQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVVCSVSEDNILQVWQMADNIYNEVDEETPADVVERQQ", - "output": "chromosome, centromeric region ; DRM complex ; ESC/E(Z) complex ; nucleus ; NuRD complex ; transcription repressor complex ; histone binding ; histone deacetylase binding ; cell fate specification ; chromatin organization ; chromatin remodeling ; embryo development ending in birth or egg hatching ; embryonic digestive tract morphogenesis ; histone deacetylation ; mitochondrial unfolded protein response ; negative regulation of DNA-templated transcription ; negative regulation of nucleic acid-templated transcription ; negative regulation of vulval development ; nematode male tail tip morphogenesis ; regulation of DNA-templated transcription" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MIYKLAARYPIQVIAIVGILVSMAYFSFLEALTQEDFPVLIRALKRFGILDGFPNTRLPNEMILKLSSVQGEDASVWEQIPAAELGGEGFVDFDITQWYYPANAKVDVAQLVEPYRNDCIFHDASGACHFFFKEVGNWTVSSIALPSNLANPPIDYFLDSSSTVIQRILPAIREHGISWSWLLQLIARTWMNTLKIASQASKTELLIVGTAYACMLISIVSLYLKMRRLGSKFWLFFSVLLSTLFSVQFAMTLVRASGVRISLVSLIESLPFLINVVALDKAAELTRQVITRCSVSDSHSPMHEDIAKACRNAAPPILRHFSFGIVVLAIFSYCNFGIKQFFLFAAVMIYDLLLLFSFFVAILTLKLEMRRYNAKDDVRKVLIEEGLSESTARHVADGNDSSATTSAGSRYFKVRYGTKIILFIFIAFNLFELCSIPFKHYAATSAAAARLIPLVRSQYPDFKSQRLLDDGVFDDVLSAISSMSNIESPSVRLLPAVFYGAELSSTSFLSTIHSFINNWSHYISASFLSKWIVCALSLSIAVNVFLLNAARLNSIKEEPEKKVVEKVVEVVKYIPSSNSSSIDDIQKDEIAQESVVRSLEECITLYNNGQISTLNDEEVVQLTLAKKIPLYALERVLKDVTRAVVIRRTVVSRSSRTKTLESSNCPVYHYDYSRVLNACCENVIGYMPLPLGVAGPLIIDGKPFYIPMATTEGALVASTMRGCKAINAGGGAVTVLTRDQMSRGPCVAFPNLTRAGRAKIWLDSPEGQEVMKKAFNSTSRFARLQHIKTALAGTRLFIRFCTSTGDAMGMNMISKGVEHALVVMSNDAGFDDMQVISVSGNYCTDKKPAAINWIDGRGKSVIAEAIIPGDAVKSVLKTTVEDLVKLNVDKNLIGSAMAGSVGGFNAHAANIVTAVYLATGQDPAQNVESSNCITLMDNVDGNLQLSVSMPSIEVGTIGGGTVLEPQGAMLDLLGVRGAHMTSPGDNSRQLARVVAAAVMAGELSLCSALASGHLVKSHIGLNRSALNTPAMDSSAKKPATDALKSVNSRVPGR", - "output": "endoplasmic reticulum ; endoplasmic reticulum membrane ; nuclear envelope ; nuclear membrane ; nuclear outer membrane-endoplasmic reticulum membrane network ; peroxisomal membrane ; hydroxymethylglutaryl-CoA reductase (NADPH) activity ; sterol sensor activity ; coenzyme A metabolic process ; ergosterol biosynthetic process ; farnesyl diphosphate biosynthetic process, mevalonate pathway ; isopentenyl diphosphate biosynthetic process, mevalonate pathway ; isoprenoid biosynthetic process" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MYDIIVAGAGHAGCEAALAAARSGSSCLLISSDLTAVARMSCNPAIGGVAKGQITREIDALGGEMAKAIDATGIQFRMLNLSKGPAMHSPRAQADRTAYTEYMKRVLEAETNLDLLQDTVTGIEVRGGQFFGVELQSGRILRAGAAILTCGTFLNGLIHIGMNHFPGGRTIAEPPVTGLTESLVAAGFTTARLKTGTPPRVDRRSIDYSIVIEQKGDENPPPFSFSSGSIAGKEQISCFLTKTTHKTHEILRTGFDRSPLFSGKVQGVGPRYCPSIEDKIHRFTERDSHHIFLEPEGFHTNEMYVNGFSTSLPEDIQIAGLQSIPGMEEVKMIRPGYAIEYDYFHPSQIRRSLETKAVENLYFAGQINGTSGYEEAAAQGLMAGINASRKLKELPPIHLQRSDAYIGVLIDDLVTKETNEPYRMFTSSAEHRLILRHDNADLRLRKFGHTAGLVDDDTYRETLSKDDEIVRMTAFLRSKTIPTTALYNLLPAESNRPMTGGQKAASALKRPGITLNRLFAALPDFAKEARLISSNPLVHEQVEINLAYEGYLKRELLQTEKVARLESLILPETFNYHSVTGLSSEGREKLLHFRPETLGQASRIMGVSPSDISVLMVRLGR", - "output": "cytoplasm ; flavin adenine dinucleotide binding ; tRNA wobble uridine modification" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MSKAREIRTKIASIKNTQKITRAMELVAASKMRKAQDRMAMSRPYASKIRKVISHVAASHAEYPHPYLQQRENIKRVGYIIVTTDRGLCGGLNVNLFRTAIADMKKWQADNIGMDLCVIGRKGEAFFRRYGGNVLAVADHLGDAPEVQDIIGIVKVMLDQYDKQQIDAIYIATNEFVNTMVQKPLVRQLLPLKTDEEEVEGGYWDYIYEPDESKDLLEMLLVRYIESQVYQAVIENIACEQSARMVAMKNATENAGQLIDELRLIYNKARQAGITQEIAEIVAGAAAVE", - "output": "plasma membrane ; proton-transporting ATP synthase complex, catalytic core F(1) ; ATP binding ; proton-transporting ATP synthase activity, rotational mechanism ; proton motive force-driven plasma membrane ATP synthesis" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MKTSMQRKLDQLSTRLAELNDLLSRENVTADLDQYRKLTREHAELGPVVEQYALWRQSRSDETAAQELLADPSMRDFAEDEIRSAREGMARLETELQKMLLPKDPNDDRNIFLEIRAGTGGDESALFAGDLLRMYLRFAERQRWQVEMMSESASDLGGYKEVIVRIAGQGAYSRLKFESGGHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRVTHIPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKSLIGSGDRSERIRTYNFPQGRMTDHRINLTLYRLEAIMDGDLDELIGALVTEHQAELLASLGEAD", - "output": "cytoplasm ; translation release factor activity, codon specific" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MTNVITRFAPSPTGFLHIGSARTALFNYLFARHHNGKFLLRIEDTDKERSTKEAVEAIFSGLKWLGLDWDGEVIFQSKRNNLYKEAALRLLQEGKAYYCFTSQEEIERQRQKALENKQHFIFNSEWRDKDSSTYPTDIKPVIRLKVPREGSITIHDTLQGDVVIENSHIDDMVLLRADGTATYMLAVVVDDHDMGITHIIRGDDHLTNAARQIAIYHAFGYEVPSMTHIPLIHGADGAKLSKRHGALGVEAYKDMGYLPESLCNYLLRLGWSHGDDEIISMTQAIEWFNLDSLGKSPSKLDFAKMNSLNAHYLRMLDNDSLTSKTVEILKQNYKISEKEVSYIKQAMPSLLVRSETLLDLAKLARIYLINSPIIYEQEAKEIIENCDKDLIKQVIEGLNKIEQFDKESVQNKFKEIATHNGLKLNDIMKPVRALITGMTASPSVFEIAEILGKENILKRLKII", - "output": "cytoplasm ; ATP binding ; glutamate-tRNA ligase activity ; tRNA binding ; zinc ion binding ; glutamyl-tRNA aminoacylation" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MKIKTVEFARSAFNEEQYPKDNLPQIVIVGRSNVGKSTLINTVLNRKNLAKTSSRPGKTRGINFYLINNKFYLVDLPGYGYAKVSKEMKKQWAHNIETFLNTSQNLRHGLFLIDIRRNPTEDDFLMINWFKHKNLPFTVVLTKADKVNKSESRKAVEDICKIFKINREEVIIFSALEKMGVSQVLSIFEKYA", - "output": "GTP binding ; metal ion binding ; division septum assembly" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MLRLAAAGARAIVDMSYARHFLDFQGSAIPRTMQKLVVTRLSPNFHEAVTLRRDCPVPLPGDGDLLVRNRFVGINASDINYSAGRYDPSLKPPFDIGFEGIGEVVALGLSASARYTVGQAVAYMAPGSFAEYTVVPASIAIPMPSVKPEYLTMLVSGTTAYLSLEELGELSEGKKVLVTAAAGGTGQFAVQLSKIAKCHVIGTCSSDEKAAFLKSIGCDRPINYRTEPVETVLKQEYPEGVDVVYESVGGAMFDLAVDALATKGRLIVIGFISGYQSPTGLSPIKAGVLPTKLLKKSASLRGFFLNHYFSKYQAAMERLLELYARGDLVCEVDLGHLAPDGRFIGLESVFQAVDYMYTGKNTGKLVVELPHPVSSKL", - "output": "mitochondrion ; peroxisome ; 13-prostaglandin reductase activity ; 15-oxoprostaglandin 13-oxidase activity ; zinc ion binding ; negative regulation of fat cell differentiation" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MAPSFDTLSEQDLHEEEEEEIDFSDLKEQFEVKLEEGLDTFIVIDGLPIVPEESRQKLIKFLLRKLNAVGHTSEDAVFMPTNDKNMSEGFAFVEYETPEQAIAAVKQLHGTPLDKKHTLAVNKLMDIDRYGREGRIDEEYKPPTVEPFKEKEHLRSWLSDPNARDQFALYRNDKVGVFWNNKNNPPENVVDRAHWTQLFVQWSPKGTYLASVHPQGVQLWGGPAFSKQKQFPHPFVQLVEFSPGESYLTTWSSRPIQVEEGHPVLSFEEDGKNIIVWDIVSGKPLRSFVSHDLAGGPVEGDAAPKKKVQWPAFKWSADEKYVARMLQGQSISIYELPRMNLLGKTSVKIDGVMDFEWSPATVTRDGVKQYEQLLSFWTPEIGSNPARVALMSVPSKEIVRTRNLFNVSDVKLHWQSQGTYVCVKVDRHSKSKKSMATNLEIFRVREKGVPVEVVDSLKDTVINFAWEPNGGRFVLITTGEAPSGAAVLPKTSVSFFAPEKKGPQAGNFKLVRTIEKKTSNAIYWSPKGRFVVVATVHSQSNFDLDFWDMDFEGEKAEGEKDLAANLQLMKTVEHYGVTDIDWDPTGRYVVSSASVWTHSMENGWNIHTFAGQTLAEHPTDKFKQFVWRPRPPTLLSKEEQKQVRKNLREYSKEFDEEDKYAVDIANTAVVETRKRVLNEWVAWLRREKELMAEEKDAYGIPEDADDAKVAKDAPPVSEDQGEAVVEEIVEEIVEENEEVIG", - "output": "cytoplasmic stress granule ; eukaryotic 43S preinitiation complex ; eukaryotic 48S preinitiation complex ; eukaryotic translation initiation factor 3 complex, eIF3e ; eukaryotic translation initiation factor 3 complex, eIF3m ; multi-eIF complex ; identical protein binding ; RNA binding ; translation initiation factor activity ; translation initiation factor binding ; formation of cytoplasmic translation initiation complex" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MASLFIIMDKRFAVFASSDKPNNCSRKNMFFLKNIIVLSNYLYLLYKAWIVCTTISLCCDFPLFNFLFIAIPYFTEILYNDSSLLWFLFVSLCFITLSFQSLEI", - "output": "endoplasmic reticulum ; endoplasmic reticulum membrane ; meiotic cell cycle" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MSYQGKKSIPHITSDRLLIKGGRIINDDQSLYADVYLEDGLIKQIGENLIVPGGVKTIEANGRMVIPGGIDVNTYLQKPSQGMTAADDFFQGTRAALVGGTTMIIDHVVPEPGSSLLTSFEKWHEAADTKSCCDYSLHVDITSWYDGVREELEVLVQDKGVNSFQVYMAYKDVYQMSDSQLYEAFTFLKGLGAVILVHAENGDLIAQEQKRILEMGITGPEGHALSRPEELEAEAVFRAITIAGRINCPVYITKVMSKSAADIIALARKKGPLVFGEPIAASLGTDGTHYWSKNWAKAAAFVTSPPLSPDPTTPDYLTSLLACGDLQVTGSGHCPYSTAQKAVGKDNFTLIPEGVNGIEERMTVVWDKAVATGKMDENQFVAVTSTNAAKIFNLYPRKGRIAVGSDADVVIWDPDKLKTITAKSHKSAVEYNIFEGMECHGSPLVVISQGKIVFEDGNINVNKGMGRFIPRKAFPEHLYQRVKIRNKVFGLQGVSRGMYDGPVYEVPATPKYATPAPSAKSSPSKHQPPPIRNLHQSNFSLSGAQIDDNNPRRTGHRIVAPPGGRSNITSLG", - "output": "centrosome ; cytosol ; growth cone ; midbody ; perikaryon ; spindle ; filamin binding ; hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides ; identical protein binding ; negative regulation of actin filament binding ; negative regulation of neuron projection development ; nervous system development ; nucleobase-containing compound metabolic process" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MKTIELFKFMISAKSQTPDDGGLLDFIQNYLDDFEAIRVDVEGVKNLFLYKKFSQGDHLCFAGHVDVVPAGDGWDSDPYIATERDGYIYGRGAQDMKSGVAAFVQAIKDTKHFNGTLSLLLTSDEEGEGTYGTIEVLNYLRDKSMLPDFAVVAEPTCEMVFGDAIKVGRRGSINGYITLRGKQGHAAYPEKSINPINLIAPKLANMAGVDLDNGDEFFSPSKFVITDIRAGMQVTNVTPNELKMMFNVRNTTLTSQKEIREFVEKNLEDLDYDLRLTQGSYPFKTDTKTKLVKNIDASIEQISGIKPKHSTAGGTSDARHMAPLGIDVIEFGVINDTIHAINERTTKDEVKKLYEVFKHLIDTWK", - "output": "cobalt ion binding ; succinyl-diaminopimelate desuccinylase activity ; zinc ion binding ; diaminopimelate biosynthetic process ; lysine biosynthetic process via diaminopimelate" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MRTLFLIDGEHYPPVVLDAMRRVREQLGAKGVAAAFLGGTEKIGEGADYGLPLVAAEDPVSAVRQALERYGVEAVVDLSDEPVVGYRERMRIASLALAAGARYVGSDFELRPPEMRRVPGKPSLAVIGTGKRVGKTAVTGYLARLLDREGFRPAVVSMGRGGPPEPEVLEGRRLEVGSDYLLRALERGAHAASDYYETAALSRVTTVGCRRCGGGLAGEPFVSNVLEGARIAAGLDTGITVFDGSGAAIPPVEVDRRVLVAGAHQDPEYVAGYLGAYRLLISDLLVLTMAEEPMAPPGRVEELVRRVREVRPDLPVIPAVFRPRPVGEVRGMRVAYVSTAPPAVLKRLAGHLEEGYGCEVVAVSGNLSNRSKLAEDLEGMPGVDAYLTEIKAAAVDVVTRRGAEEGRRVIYCDNDPVAEGLDGALLRLARAAGRGRSGDRGV", - "output": "cytoplasm ; ATP binding ; cyclic 2,3-diphosphoglycerate synthetase activity ; ligase activity ; gluconeogenesis" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MATIRADEISNIIRERIEQYNREVKIVNTGTVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESKNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISSSESRLIESPAPGIISRRSVYEPLQTGLIAIDAMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGNNVICVYVAIGQKASSVAQVVNALQERGAMEYTIVVAEAADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDPSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSRLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFAELEAFAQFSSDLDKATQNQLARGQRLRELLKQSQAKPLTVAEQILTIYTGTNGYLDSFEIAQVRKFLDELRDYVKTRKPQFEEIISSTKIFTEEAQALLKDAIQEQKELFLVQE", - "output": "chloroplast thylakoid membrane ; proton-transporting ATP synthase complex, catalytic core F(1) ; ATP binding ; proton-transporting ATP synthase activity, rotational mechanism ; proton-transporting ATPase activity, rotational mechanism" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MAKKLSKNQQKVRALFDANQAYDLHEAIELAKKTSYTKFDASVDLAFKLNLDVRKADQQLRGSVLLPKGTGKDVKVLVVTNNPEKQKLATEAKADFVLDAAAFEQKLKEDDYNFDVIVADPAMMPILGKYGKKLGPKGLMPNPKTGTVTPTPEKAVEELKKGKANYRTDKAGVVHSLIGKVSMPTESLVENAQTLISLIKKLKPAAVKGTYMQNLTVSSSMGPGIKIKLEK", - "output": "large ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; tRNA binding ; regulation of translation ; translation" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MNELLKSCVNGRTLNEIEAHSIMRDMMTGSLSAAEIGGLLSVLAYRGETAEEITGFVRAMREQAHTIDGPEHVVDTCGTGGDGSSTFNISTAAAIIASSAGAKIAKHGNRSVSSKSGSADVLEYLGVSIQTSPEETIKSIERRNMGFLYAPSYHSSMKHVAGARKDLAFRTVFNLLGPLSNPMKAKRQVIGVYSIEKAKLMARALEAFEPEHVLFVSSRDGLDELSITSPTDVIELKGGKTYEYTVEPGDVGLPLGRLRDIQVATPEESGRLIVDILKNRGPDSAVHIAAFNAGAALYVAEQAADLKEGVALALEAVAGGEALNQLERLKQKEEELYA", - "output": "anthranilate phosphoribosyltransferase activity ; magnesium ion binding ; tryptophan biosynthetic process" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MKATTMSHLRQWKLEKRKFATLTAYDASFAQLFAEQGIEVLLVGDSLGMTLQGFDSTLPVTTADVAYHTRAVRRGAPHCLLLADMPFMSYATPEQTFANAAELMRAGANMVKLEGGSWLCDTVRMLAERAVPVCGHLGLTPQSVNIFGGYKVQGREEVAANQLLKDAQALENAGAQLLVLECVPVELAQRVTEALAIPVIGIGAGNVTDGQILVMHDALGITGGHTPKFSKNFLAQSAGDIRAAIKLYIQEVESGAYPAEEHTFQ", - "output": "cytoplasm ; 3-methyl-2-oxobutanoate hydroxymethyltransferase activity ; metal ion binding ; pantothenate biosynthetic process" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MDKYTNRDHPDYIPGTFNIYSSQNLENGIIYESKLKKTSSGVVLIPQPSYSPNDPLNWSSWRKLAHFGLMAFITAFTAATSNDAGAAQDSLNEIYGISYDSMNTGAGVLFLGIGWSTLFLAPFANLYGRKITYIVCTTLGLFGALWFALAKRTSDTIWSQLFVGISESCAEAQVQLSLSDIFFQHQLGSVLTVYIMCTSIGTFLGPLIAGYISAFTNFRWVGWVAVIISGGLLITIIFGCEETYFDRGQYMTPLTSCQSGYEDGTTLQNSDNTAVSRRKRHLDAKLSTPGAMGEKGVDLSETAEFEVNNEEEVTIPETRELIDGSKEHLKPYPKRVAILTKATNLKGYGFKQYFKYLKINLRMFLFPPVWLSGMFWGIQDVFLTFYLTTQESAYYEPPWNYSDFGVAIMNVPTLIGAVIGCICAGIVSDYFVLWMARHNRGILEAEFRLYFSIATAIIGPAGLLMFGIGTARQWPWQAIYVGLGFVGFAWGCSGDIAMAYLMDCYPDMVLEGMVCTAIINNTISCIFTFTCSDWLAASGTENTYIALAVINFGITAFALPMYYYGKRIRLWTKRWYLQSVNLRDGV", - "output": "cell periphery ; fungal-type vacuole ; membrane ; mitochondrion ; alcohol transmembrane transporter activity ; inorganic cation transmembrane transporter activity ; transmembrane transporter activity ; monoatomic cation transport ; organic hydroxy compound transport ; transmembrane transport" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MHNLIKDLKARNLINNITNEEKLKKALAENKGIYVGFDPSADSLHLGNYIMIMLLKRFRLHNIKTFALVGGATGMIGDPSGKSAERNLLDKTILEHNITKIKYQLEKFTNSQVINNYDFYKNMTFLDFLRDVGKLININYLLEKEIISSRLDVGISYTEFSYNLLQGYDFLQLYKNDNIAIQAGGSDQWGNITTGIEIIRKSLGDDNIACGLTINLLTNSEGKKFGKSEKGAIYLDENKSSVYEMYQFLINQTDADVEKLLNFLTLIDVDEINKIMQAHKENPALRIAQKALAQAVVVDVHGQQKYEQALHISQVLFNGNINELNQEEFNIAIKSLPTTKLDKDEIKIIDLLNLANISSSNRVARDFLSTGSILVNDIKVNDENFLVKKQDAINQEFSIIKKGKRNYFLIVWNKD", - "output": "cytoplasm ; ATP binding ; RNA binding ; tyrosine-tRNA ligase activity ; tyrosyl-tRNA aminoacylation" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MDPNTVSSFQVDCFLWHVRKQVADQELGDAPFLDRLRRDQKSLRGRGSTLGLNIETATRVGKQIVERILKEESDEALKMTMASAPASRYLTDMTIEEMSRDWFMLMPKQKVAGPLCIRMDQAIMDKNIILKANFSVIFDRLETLILLRAFTEEGAIVGEISPLPSLPGHTNEDVKNAIGVLIGGLEWNDNTVRVSKTLQRFAWRSSNENGRPPLTPKQKRKMARTIRSEVRRNKMAD", - "output": "host cell cytoplasm ; host cell nucleus ; protein serine/threonine kinase inhibitor activity ; RNA binding ; suppression by virus of host mRNA processing ; suppression by virus of host PKR signaling ; suppression by virus of host type I interferon-mediated signaling pathway ; suppression by virus of host viral-induced cytoplasmic pattern recognition receptor signaling pathway via inhibition of host RIG-I activity" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MATSISARLIYYAKLSKPRIIWLLDLAALSGAFLSGKLMPLSILAVLVGGTFASAGSMIINEGIEIDKDKVMKRTSKRPTVMGYVSQKEAIYVGIALLTLGTLVGLLDNPLTSFFILLGGLVYVLVYTVWLKPRSPLNIVIGGLAGSAAAWAGYASTTSSFTIPSILLGLLIFMWTPGHFWALALKFKEDYSRAGIPMLPVIMPENFSAKMIALSNALMIPFALALYLYAGVIYGIVAGILSAVQMYFSVRLMRNPTGEEAWRSFKFSSPYLAILLILIILTRLI", - "output": "plasma membrane ; protoheme IX farnesyltransferase activity ; heme O biosynthetic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MVEALLSGIVLGLIPITLAGLFVTAYLQYRRGDQLDL", - "output": "chloroplast thylakoid membrane ; cytochrome b6f complex ; electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity ; cytochrome complex assembly ; photosynthesis" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MTTPYPRSDERRRMVDLQIAGRGIRDPRVLAAMAEVPRHLFIPPPYDRDAYADTPLPIGNDQTISQPYIVALMTELLHPCPEDRVLEIGAGSGYQAAILARLAAKVVTIERLGAVAAQARANLAAVGAENVEVIEGDGTFGYPLSAPYDGILVTAASPEIPQPLTEQLADKGRLVVPVGGRAMQDIVVLERDGSRYREERIEGVRFVPLIGKYGWEN", - "output": "cytoplasm ; protein-L-isoaspartate (D-aspartate) O-methyltransferase activity ; methylation ; protein modification process ; protein repair" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MSIEIPAGLTELLQGFTVEVLRHQPADLLEFALQHFTRLQEENERKGTARFGHEGRTWGDAGAAGGGGTPSKGVNFAEEPRHSDSENGEEEEEEAADAGAFNAPVINRFTRRASVCAEAYNPDEEEDDAESRIIHPKTDDQRNRLQEACKDILLFKNLDPEQMSQVLDAMFEKLVKEGEHVIDQGDDGDNFYVIDRGTFDIYVKCDGVGRCVGNYDNRGSFGELALMYNTPRAATITATSPGALWGLDRVTFRRIIVKNNAKKRKMYESFIESLPFLKSLEVSERLKVVDVIGTKVYNDGEQIIAQGDSADSFFIVESGEVKITMKRKGKSEVEENGAVEIARCSRGQYFGELALVTNKPRAASAHAIGTVKCLAMDVQAFERLLGPCMEIMKRNIATYEEQLVALFGTNMDIVEPTA", - "output": "cAMP-dependent protein kinase complex ; cytosol ; plasma membrane ; cAMP binding ; cAMP-dependent protein kinase regulator activity ; regulation of protein phosphorylation" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MSEKQVFSTEWAGKTLSVEVGQLAKQASGAALIRYGDTVVLTAAVGSKKPRPGDFFPLTVNYEEKMYSVGKVPGGFLKREGRPSDRATLTARLIDRPIRPLFAEGFRNEVQITSTVFSVDQDCSPEMAAMLGSSVALVISDIPFEGPIAGVDVGRIDGKYVINPTIEQAEKSDISLTVAGTYDAINMVEAGAKEVSEEAMLEAIMFGHEEIKRLCEFQQQIIAAVGKEKREIELFVSDPELEAEVKAASEGKMKAAIKTEEKKAREAAIEDVKEEILESYKAKELENEAEILSEVAHILEMIEKDEMRRLISQDKIRPDGRKVNEIRPLSSEVGMLPRVHGSGLFTRGQTQALSVCTLAPLREHQIIDGLGTEEYKRFMHHYNFPQFSVGETGPRRAPGRREIGHGALGERALQYVIPSEEEFPYTIRLVSEVLESNGSSSQASICGSTLAMLDAGVPIKAPVAGIAMGLVKLGDDYTILSDIQGMEDHFGDMDFKVAGTKDGITALQMDIKIDGLSRQILDEALTQAKEGRLHILEHLTSTISAPREELSAYAPKIITLNIKPEKIKDVIGPGGKQINAIIDETGVKIDIEQDGTVYIASQDQAMNRKAIAIIEDIVREVEVGEVYTGKVRRIEKFGAFVELFKGTDGLVHISELAHERVGKVEDILKLGDEVTVKVIEVDQQGRVNLSRKALLEKKEQPEGDKKPQAEKKFYPKTKKPESK", - "output": "cytoplasm ; magnesium ion binding ; polyribonucleotide nucleotidyltransferase activity ; RNA binding ; mRNA catabolic process ; RNA processing" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MDELAGGGGGGQGMAAPPRPQQGPGGNLSLPPGANGAPGGGGPPAAEAAGPPAGPELSRPQQYTIPGILHYIQHEWARFEMERAHWEVERAELQARIAFLQGERKGQENLKKDLVRRIKMLEYALKQERAKYHKLKYGTELNQGDLKMPTFESEETKDVEAPPAPQNSQLTWKQGRQLLRQYLQEVGYTDTILDVRSQRVRSLLGLSNSEPNGSVEAKNLEQILNGGESPKQKGQEIKRPPGDVLETFNFLENADDSDEEENDMIEGIPEGKDKLRIHKHKIGNEGLAADLTDDPDTEEALKEFDFLVTAEDGEGAGEARSSGDGTEWDKDDLSPTAEVWDVDQGLISKLKEQYKKERKGKKGVKRVNRTNLCDMITDLGDDELPHIPSGIINQSRSASTRMADHEGARAEEAEPITFPSGGGKSFIMGSDDVLLSVLGLGDLADLTVTNDADYSYDLPANKDAFRKTWNPKYTLRSHFDGVRALAFHPVEPVLVTASEDHTLKLWNLQKTVPAKKSASLDVEPIYTFRAHIGPVLSLAISSNGEQCFSGGIDATIQWWNMPSPNVDPYDTYESNVLAGTLVAHTDAVWGLAYSGIKNQLLSCSADGTIRLWNPQEKLPCVCTYNGDKEHGIPTSVDFIGCDPAHMVTSFNTGSAVIYDLETSQSLVMLSSQVDSGLQSSNHINRVVSHPTLPVTITAHEDRHIKFFDNKTGKMIHSMVAHLDAVTSLAVDPNGIYLMSGSHDCSIRLWNLDSKTCVQEITAHRKKLDESIYDVAFHPSKAYIASAGADALAKVFV", - "output": "cytoplasm ; dendrite ; FAR/SIN/STRIPAK complex ; Golgi apparatus ; neuronal cell body ; nucleoplasm ; nucleus ; plasma membrane ; protein-containing complex ; armadillo repeat domain binding ; calmodulin binding ; protein phosphatase 2A binding ; protein-containing complex binding ; small GTPase binding ; negative regulation of DNA-templated transcription ; negative regulation of intracellular estrogen receptor signaling pathway ; negative regulation of transcription by RNA polymerase II ; positive regulation of transcription by RNA polymerase II ; response to estradiol" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MPLGLGRRKKAPPLVENEEAEPSRSGLGVGEPGPLGGSGAGESQMGLPPPPASLRPRLVFHTQLAHGSPTGRIEGFTNVKELYGKIAEAFRLPAAEVMFCTLNTHKVDMDKLLGGQIGLEDFIFAHVKGQRKEVEVFKSEDALGLTITDNGAGYAFIKRIKEGSVIDHIQLISVGDMIEAINGQSLLGCRHYEVARLLKELPRGRTFTLKLTEPRKAFDMISQRSSGGHPGSGPQLGTGRGTLRLRSRGPATVEDLPSAFEEKAIEKVDDLLESYMGIRDTELAATMVELGKDKRNPDELAEALDERLGDFAFPDEFVFDVWGAIGDAKVGRY", - "output": "brush border ; cell cortex ; cytoplasm ; cytoplasmic vesicle ; cytosol ; dendritic shaft ; dendritic spine ; endocytic vesicle ; glutamatergic synapse ; membrane ; postsynapse ; presynapse ; Schaffer collateral - CA1 synapse ; synaptic vesicle ; vesicle membrane ; actin binding ; identical protein binding ; myosin binding ; PDZ domain binding ; signaling receptor binding ; cellular response to interleukin-7 ; chemical synaptic transmission ; endothelial cell migration ; glutamate secretion ; negative regulation of proteasomal ubiquitin-dependent protein catabolic process ; positive regulation of cytokinesis ; positive regulation of melanin biosynthetic process ; positive regulation of transforming growth factor beta receptor signaling pathway ; presynaptic modulation of chemical synaptic transmission ; protein targeting ; regulation of protein stability ; regulation of synaptic plasticity ; regulation of synaptic vesicle exocytosis" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MNRSQILTDRQQQELNKAILQYLEPMLTESSSDQEVYRSLQQILVPPSSSSSEAIVDNYLEKKWSTVLRLQRKIIDLENEVGTLRSIVDGQQSVSNGAASVISKDRINWLPNRASKSFPTQQNQLVMASVIHPVLPVIFGGCSDGSIIVWNIVNDDTSIPEKIIRAHTRSINKLAFSVEPADLSKDLTKSKTYIFASCSADLSIKIWDSSSYRHIRTLTGHDHTVSSVAFSQSNPDHLYSVSRDKTVKIWDLVNGYCVKSFTGHSEWVRDIDVASVNSQLSLNNMKVSAELGDFVVTCSNDQSVRVSHAESGAGLALLIGHTHVIEKVKFLPAVSNTILDKFLKENHAQFPSIPQELVSDEIFTTTLGYKYCISGGRDNLLKLWLIPPPTLIPHRSPLPAQHNNSQGWAIADLVGHQSWVKAIAIHPNGRFIFSGSDDKTIKVWDLANLNVTGSVKCVRTLSGHDGFINDLDFAAFNRDSGKEDKIKEDATEEESHQQLMKFIEGRMRCLFISGAADNSIKLWS", - "output": "cytoplasm ; microtubule ; microtubule associated complex ; spindle pole ; dynein complex binding ; cell division ; establishment of mitotic spindle orientation ; microtubule sliding" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "METLDYRFDGTTHAHFPTNAVLVGVLASGNLEILLEPAALDGAMTVRIITAAQGFGSVWQAVITDFARRHPLRDVRISINDAGATPAVVSLRLDQAVETLLGGGTP", - "output": "cytoplasm ; acyl carrier activity" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MKTKEVVDDITMNRAITRITYEIIERNKELNQVVLAGIKTRGVHLAHRIQKRLAQLEQIDIPVAEIDTKPFRDDKKSQEADSTLIPVDITDRQVILIDDVLYTGRTIRAAIDNLVSHGRPSRVSLAVLVDRGHRELPIRTDYIGKNIPTSRTEEIIVEMTETDGQDRILIKGE", - "output": "RNA binding ; uracil phosphoribosyltransferase activity ; DNA-templated transcription termination" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MATTYEEFAAKLDRLDAEFAKKMEEQNKRFFADKPDEATLSPEMKEHYEKFEKMIQEHTDKFNKKMREHSEHFKAKFAELLEQQKNAQFPGK", - "output": "cytoplasm ; microtubule ; microtubule cytoskeleton ; cytoskeleton organization ; defense response ; positive regulation of cell population proliferation" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MDLIETINAVVELQHRVRNLSPNTNIYQDGQTTINDYNAIASRCNGKVYNLRDQIAQLSPFQVHMPVIPISTILSTDDHETMSAGIESLFDVLAAAIRTEGSRQNRAVVTKSIEPEVLKAVLDIGIRSQFSENPYANMLQVDTAKMEQQLEPIDDPLASQRINMLAAGGATNNTGGGYHALVGRATGKTGIITIIQGRPGAVTFNLNMKVPCSGVLSLTLLPAPGVIQLSLGNQPPNNIPVHAECVDVSTVFTEGDIVIRFELAGRVVGNANKLGTLNFPLCDRISITIEPWNANKQNNANANFNNWPAGTAQRQPTISLFVNIINASSLIDYETHSKYLAGATYLMGTTFSEDSFIASPPNVVWTMSSLLSGAPPQYIHWTRKIACMIAAFSCKI", - "output": "viral envelope ; viral intermediate capsid ; host cell surface receptor binding ; structural molecule activity ; fusion of virus membrane with host plasma membrane" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MAEVPELASEMMAYYSGNEDDLFFEVDGPKQMKCSFQDLDLCPLDGGIQLQISHEHYNKGFRQAVSVVVAMEKLRKMLVPCPQIFQDNDLSTLIPFIFEEEPVFLDTRNNDACVHDAPVRSLHCTLRDAQLKSLVMSGPYELKALHLQGQDLEQQVVFFMSFVQGEESNDKIPVALGLKAKNLYLSCVLKDDKPTLQLESVDPKNYPKKKMEKRFVFNKIEINNKLEFESAQFPNWYISTSQAENMPVFLGGTRGGQDITDFTMQFVSS", - "output": "cytosol ; extracellular space ; lysosome ; cytokine activity ; integrin binding ; interleukin-1 receptor binding ; fever generation ; immune response ; positive regulation of cell division ; positive regulation of T-helper 1 cell cytokine production ; positive regulation of type II interferon production ; vascular endothelial growth factor production" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MSKLIVPQWPQPKGVAACSSTRIGGVSLPPYDSLNLGAHCGDNPDHVEENRKRLFAAGNLPSKPVWLEQVHGKDVLKLTGEPYASKRADASYSNTPGTVCAVMTADCLPVLFCNRAGTEVAAAHAGWRGLCAGVLEETVSCFADNPENILAWLGPAIGPRAFEVGGEVREAFMAVDAKASAAFIQHGDKYLADIYQLARQRLANVGVEQIFGGDRCTYTENETFFSYRRDKTTGRMASFIWLI", - "output": "cytosol ; 2'-deoxyadenosine deaminase activity ; adenosine deaminase activity ; copper ion binding ; oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor ; protein homodimerization activity ; purine-nucleoside phosphorylase activity ; S-methyl-5-thioadenosine phosphorylase activity" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MLMITSFANPRVAQAFVDYMATQGVILTIQQHNQSDIWLADESQAERVRVELARFIENPGDPRYLAASWQSGQTNSGLRYRRFPFLATLRERAGPVTWIVMLACVVVYIAMSLIGDQTVMVWLAWPFDPVLKFEVWRYFTHIFMHFSLMHILFNLLWWWYLGGAVEKRLGSGKLIVITVISALLSGYVQQKFSGPWFGGLSGVVYALMGYVWLRGERDPQSGIYLQRGLIIFALLWIVASWFDWFGMSMANGAHIAGLIVGLAMAFVDTLNARKRT", - "output": "plasma membrane ; serine-type endopeptidase activity ; proteolysis" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MENTLGLEIIEVVEQAAIASAKWMGKGEKNTADQVAVEAMRERMNKIYMRGRIVIGEGERDDAPMLYIGEEVGICTQPNADQLCNPDELVEIDIAVDPCEGTNLVAYGQPGSMAVLAISEKGGLFAAPDFYMKKLAAPPAAKGKVDINKSATENLKILSECLDRSIDELVVVVMKRDRHQGLIKEIRDAGARVQLISDGDVGAAISCGFAGTNVHALMGIGAAPEGVISAAAMRALGGHFQGQLIYDPEVVKTGLIGESKQANLDRLSSMGINDPDKVYDAHELASGENVLFAGCGITSGNLMQGVRFFHGGARTQSLVISSQSQTARFVDTIHMAGQPKTVQLH", - "output": "fructose 1,6-bisphosphate 1-phosphatase activity ; metal ion binding ; sedoheptulose-bisphosphatase activity ; gluconeogenesis ; glycerol metabolic process ; reductive pentose-phosphate cycle" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MSEEKYIMAIDQGTTSSRAIIFNKKGEKIASSQKEFPQIFPQAGWVEHNANQIWNSVQSVIAGAFIESSIKPGQIEAIGITNQRETTVIWDKKTGLPIYNAIVWQSRQTAPIADQLKEDGYTDLIHEKTGLVIDAYFSATKIRWILDHVPGAQERAEKGELLFGTIDTWLVWKLTDGAAHVTDYSNAARTMLYNIKELKWDEEILKLLNIPKAILPEVKSNSEVYGKTAAFHFYGGEVPISGMAGDQQAALFGQLAFEPGMVKNTYGTGSFIIMNTGEDMQLSENNLLTTIGYGINGKVYYALEGSIFIAGSAIQWLRDGLRMIETSPESEALALASTSDDEIYVVPAFTGLGAPYWNSNARGSVFGLTRGTTKEDFVKATLQSIAYQVRDVIDTMQIDSGIDIQQLRVDGGAAMNNLLMQFQADILGIDIARAKNLETTALGAAFLAGLAVGYWEDLDSLKELNETGQLFKASMNESRKEKLYKGWKKAVMATQIFAEE", - "output": "ATP binding ; glycerol kinase activity ; glycerol catabolic process ; glycerol metabolic process ; glycerol-3-phosphate metabolic process ; phosphorylation" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MSNESIKAEQDLIQEGVESEVSTAEASLIDELTQANFRIEELEQLLAEALAKVEEQKDSVIRAAAEVDNIRRRAAMDVEKANKFALEKFANELLPVLDNMERALMGTNPEDEATKSIYQGVELTQKSLLTAVAKFGVKQIDPQGQSFNPDQHQAIGMQPSAEFPANTVMLVMQKGYELNSRLLRPAMVMVSQGGPNQESATIDIEA", - "output": "cytoplasm ; adenyl-nucleotide exchange factor activity ; protein homodimerization activity ; protein-folding chaperone binding ; protein folding" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MKIKIYIYILLACYIASFLRLFINNNFIVSIIGSLLFGFFIDKRLSYSIEKIILSGFFSCFTSFSGFIYFLYKVFNQGDLMKFIIFCNLIIIINLLVMYFGFWISRKIT", - "output": "plasma membrane ; fluoride transmembrane transporter activity" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MTIDNPSAFLKTLPTGSGVYQIQDAQGKVIYVGKARNLQKRVSSYFRRQLDSKTQAMMAQVQSIQTTITRNENEALLLEASFIKQFRPRYNVLLRDDKSYPYLYLATHQKFPRLDFYRGAKKAPGRYFGPYPNAGSVRENLALIQKLFKLRQCSESFFKNRTRPCLQYQIKRCTAPCVGYVNEQEYRRQVEDAILFFEGKNDQVIIKLTERMEVASENLVFEEAAHYRDQIRQLRRLQKQQIITGGKGNIDIIGIAESNGAIGFAILFIRSGRMIGHKPFFPNTPLGTTLQTALVEFIPQYYLSPLRNGDIPERIVTSEPLEDRLWIQRALSSGLNRRLAITDQKRAPYKQWQAMAALNAAQALSQHLAQKNTFALKLEAIQKSLALPNPIARIECFDISHTLGEATVASCVVFGEEGLIKKDYRRFNISGVTPGDDYGALRQALTRRYVRLKEGEGILPDVLLIDGGMGQLRQAAEVLEELQVSGVILTAIAKGPGRKAGLEKLFVWGRREEIHLPADNIAFHLIQQIRDEAHRFAITAHCNRRAKRRVESTLQEIEGIGPKRRQKLLKYFGGLQELQRASIEEIARVPGVSETLAKAIYDACHQHKG", - "output": "cytoplasm ; excinuclease repair complex ; DNA binding ; excinuclease ABC activity ; nucleotide-excision repair ; SOS response" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MSALNKKSFLTYLKEGGIYVVLLVLLAIIIFQDPTFLSLLNLSNILTQSSVRIIIALGVAGLIVTQGTDLSAGRQVGLAAVVAATLLQSMDNANKVFPEMATMPIALVILIVCAIGAVIGLINGLIIAYLNVTPFITTLGTMIIVYGINSLYYDFVGASPISGFDSGFSTFAQGFVALGSFRLSYITFYALIAVAFVWVLWNKTRFGKNIFAIGGNPEAAKVSGVNVGLNLLMIYALSGVFYAFGGMLEAGRIGSATNNLGFMYELDAIAACVVGGVSFSGGVGTVIGVVTGVIIFTVINYGLTYIGVNPYWQYIIKGAIIIFAVALDSLKYARKK", - "output": "ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing ; plasma membrane ; galactose transmembrane transporter activity ; methylgalactoside transmembrane transporter activity ; DNA damage response ; galactose transmembrane transport ; methylgalactoside transport" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MKIGIIMGGISTEREVSLNSGREVIKYLELLEHEIIPIIIDKKEDVMEKAKGIDFAFLALHGEFGEDGTVQSVLQTLDIPYSGCGPLTSAICMDKDMTKKILKYANINTADWVNVSSVENIDYEAIEKIGYPVFVKPNSGGSSVATNLVKDKEGIKEAVELALKYDKEVMIENYTKGEEITCCMLNGKMLPVLAIRPHAEFFDYTAKYADGGSDEVVIELEENLHKKVEEMALACWKELKCEVYVRVDMIVKDGIPYVLELNTLPGMTKNSLFPKSANAVGISFAELLNSIVKYSLEVER", - "output": "cytoplasm ; ATP binding ; D-alanine-D-alanine ligase activity ; metal ion binding ; cell wall organization ; peptidoglycan biosynthetic process ; regulation of cell shape" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MDRYAVRTWGIVGILGCAAVGAAPTGPASDTTNATARLPTHPPLIRSGGFAVPLIVGGLCLMILGMACLLEVLRRLGRELARCCPHAGQFAP", - "output": "host cell endoplasmic reticulum membrane ; host cell endosome membrane ; host cell Golgi membrane ; membrane" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MAQPQNVPTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNFGEICFNVWDTAGQEKLGGLRDGYYIQGQCGIIMFDVTSRITYKNVPHWWRDLVRVCENIPIVLCGNKVDVKERKVKAKAITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLVGNPNLEFVASPALAPPEVQVDQQLLAQYQQEMNEAAAMPLPDEDDADL", - "output": "cytoplasm ; cytosol ; nucleus ; GTP binding ; GTPase activity ; poly(A)+ mRNA export from nucleus ; protein import into nucleus ; ribosomal subunit export from nucleus ; signaling" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MASTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE", - "output": "plant-type vacuole ; vacuolar proton-transporting V-type ATPase, V0 domain ; vacuole ; proton-transporting ATPase activity, rotational mechanism" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MSSRDFSNDLFSINIEENAGCVVSAKVQANPLVTQKCHKEALKTVKKNVVLPGFRKGKAPDNIVESRYSTQVEQELRRLFLRASFEALSQMCDRKPLSPKAVRSSAIDTCNPVNGGSVSFLYEAFPVIPSLPWEQLSLPDPEPVKEISEEDLENGLKNVAYFFATKTPVTRPSQEGDFISLSLYVSKRGDENSTPVAIFENKYFKISEEDMTDSFKARFLNVSTGHRVEEEIGSEDIQSFLNGDLLTFTVNAVIEISSPEMDDEKARQLQAESLEDLKKKLRIQLENQAKEAQHQKRFSDAEDALAQLIDFDLPESLLQEREELLSREKLLNARLVKYCSDSELEEQKQALLEEAKADARKAVKLLFLTQKVFSEKGLSISREELQYMMDVCSRERFGGYPPKDISNEMIQELVLVARDRLTYRKAIEAISSEKKDLEVVPS", - "output": "cytoplasm ; peptidyl-prolyl cis-trans isomerase activity ; cell cycle ; cell division ; protein folding ; protein transport" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MLPVHTEVKPNPLQDANLCSRVFFWWLNPLFKTGHKRRLEEDDMFSVLPEDRSKHLGEELQRYWDKELLRAKKDSRKPSLTKAIIKCYWKSYLILGIFTLIEEGTRVVQPLFLGKIIEYFEKYDPDDSVALHTAYGYAAVLSMCTLILAILHHLYFYHVQCAGMRLRVAMCHMIYRKALRLSNSAMGKTTTGQIVNLLSNDVNKFDQVTIFLHFLWAGPLQAIAVTVLLWVEIGISCLAGLAVLVILLPLQSCIGKLFSSLRSKTAAFTDARIRTMNEVITGMRIIKMYAWEKSFADLIANLRKKEISKILGSSYLRGMNMASFFIANKVILFVTFTSYVLLGNEITASHVFVAMTLYGAVRLTVTLFFPSAIERGSEAIVSIRRIKNFLLLDELPQRKAHVPSDGKAIVHVQDFTAFWDKALDSPTLQGLSFIARPGELLAVVGPVGAGKSSLLSAVLGELPPASGLVSVHGRIAYVSQQPWVFSGTVRSNILFGKKYEKERYEKVIKACALKKDLQLLEDGDLTVIGDRGATLSGGQKARVNLARAVYQDADIYLLDDPLSAVDAEVGKHLFQLCICQALHEKITILVTHQLQYLKAASHILILKDGEMVQKGTYTEFLKSGVDFGSLLKKENEEAEPSTAPGTPTLRKRTFSEASIWSQQSSRPSLKDGAPEGQDAENTQAVQPEESRSEGRIGFKAYKNYFSAGASWFFIIFLVLLNMVGQVFYVLQDWWLSHWANKQGALNNTRNANGNITETLDLSWYLGIYAGLTAVTVLFGIARSLLVFYILVNASQTLHNRMFESILKAPVLFFDRNPIGRILNRFSKDIGHMDDLLPLTFLDFIQTLLLVVSVIAVAAAVIPWILIPLVPLSVVFLVLRRYFLETSRDVKRLESTTRSPVFSHLSSSLQGLWTIRAYKAEERCQELFDAHQDLHSEAWFLFLTTSRWFAVRLDAICAIFVIVVAFGSLVLAKTLNAGQVGLALSYALTLMGMFQWSVRQSAEVENMMISVERVIEYTDLEKEAPWECKKRPPPGWPHEGVIVFDNVNFTYSLDGPLVLKHLTALIKSREKVGIVGRTGAGKSSLISALFRLSEPEGKIWIDKILTTEIGLHDLRKKMSIIPQEPVLFTGTMRKNLDPFNEHTDEELWRALEEVQLKEAIEDLPGKMDTELAESGSNFSVGQRQLVCLARAILKNNRILIIDEATANVDPRTDELIQQKIREKFAQCTVLTIAHRLNTIIDSDKIMVLDSGRLKEYDEPYVLLQNPESLFYKMVQQLGKGEAAALTETAKQVYFRRNYPDITFTSPAVMNTSNGQPSALTIFETAL", - "output": "apical plasma membrane ; basolateral plasma membrane ; external side of apical plasma membrane ; Golgi apparatus ; membrane ; nucleolus ; plasma membrane ; platelet dense granule membrane ; ABC-type bile acid transporter activity ; ABC-type glutathione S-conjugate transporter activity ; ABC-type xenobiotic transporter activity ; alcohol transmembrane transporter activity ; ATP binding ; ATP hydrolysis activity ; ATPase-coupled transmembrane transporter activity ; efflux transmembrane transporter activity ; glutathione transmembrane transporter activity ; guanine nucleotide transmembrane transporter activity ; prostaglandin transmembrane transporter activity ; purine nucleotide transmembrane transporter activity ; urate transmembrane transporter activity ; xenobiotic transmembrane transporter activity ; bile acid and bile salt transport ; cAMP transport ; cilium assembly ; export across plasma membrane ; fatty acid derivative transport ; leukotriene transport ; organic hydroxy compound transport ; positive regulation of smooth muscle cell proliferation ; prostaglandin secretion ; prostaglandin transport ; transmembrane transport ; urate transport ; xenobiotic transmembrane transport" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MNKVEAGNELGFRVGFSGHGGHLRVEPFYTAERDDALNSLPDFVSPPAFAKETKESIKKHIEEKYLIPRLEPDQFSAEKAENQWDFDWFSRVKMPLQPSLPRSVVVPTWELPFRRQKEDTENGAWEPKSVEVDLSEQMYGDQDSGFFPRMVGPPKDFLRGSVNNRPFRPGGLEDSQSSERVLPEGVSSGQWVQELLNGGPAQTVPPSFKQSLDLGDLMPYPQTWSVYEDHSSHGNASDENSSKLSIQFDDLFKKAWEEDTFSELEGDDHTAGSESPKAEAEPDAKASISNEVSKGLETDVTVLDEILSSAKTAIMSEEAVTGSSDKQLRKEGWATKGDSQDIADRFYELVPDMAIEFPFELDNFQKEAICCLEKGESVFVAAHTSAGKTVVAEYAFALATKHCTRAVYTAPIKTISNQKYRDFCGKFDVGLLTGDVSIRPEASCLIMTTEILRSMLYRGADIIRDIEWVIFDEVHYVNDVERGVVWEEVIIMLPRHINFVLLSATVPNTFEFADWIGRTKQKEIRVTGTTKRPVPLEHCLFYSGELYKVCENEVFLSKGIKDAKDSQKKKNSNAVSVAPKQQMGSSAHQDGSKSQKHEAHSRGKQNKHSSVKDVGKSSYSGNSQNNGAFRRSAASNWLLLINKLSKMSLLPVVVFCFSKNYCDRCADALTGTDLTSSSEKSEIRVFCDKAFSRLKGSDRNLPQVLRLQSLLHRGIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTETFAMGVNAPARTVVFDALRKFDGKEFRQLLPGEYTQMAGRAGRRGLDKTGTVVVMCRDEVPDESDLRRVIVGSATRLESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHAQKKLPEKQQLLMIKRSLPTKHIECIKGEPAIEDYYDMYMEANEYNNKMSEAVMQSPYAQSFLVQGRVVVMKSGMGIDNLLGIVLKGPSNTNRQYVVLVIKSEIPPPEKNMVSIGKKSSDPSQGYFIAPKSKRGFEEEFYTKPSSRKGPVVIKIELPYHGVAAGVGYEVKGFDNKEFLCICDSKIKIDQVRLLEDGNKAAFSQTVQQLLDLKSDGNKFPPALDPVKDLKLKDAELVETYYKWTNLLQKMSMNKCHGCVKLEEHMKLAREIKKHKTDLKDLEFQMSDEALLQMPAFQGRIDVLKNIGCIDDDLVVQIKGRVACEMNSGEELICTVCLFENQFEELEPEEAVAIMSAFVFQQKNTSAPTLTPKLAKAKQRLYDTAIRLGELQAQYNLQIDPEEYAQENLKFGLVEVVYEWAKGTPFAEICELTDVPEGLIVRTIVRLDETCREFKNAAAIMGNSALHKKMDAASNAIKRDIVFAASLYVTGV", - "output": "cytoplasm ; plant-type vacuole ; Ski complex ; ATP binding ; ATP hydrolysis activity ; RNA binding ; RNA helicase activity ; nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay ; positive regulation of wax biosynthetic process ; post-transcriptional gene silencing ; potassium ion transport ; response to potassium ion ; RNA fragment catabolic process" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MAASISGYTFSAVCFHSANSNADHEGFLLGEVRQEETFSISDSQISNTEFLQVIEIHNHQPCSKLFSFYDYASKVNEESLDRILKDRRKKVIGWYRFRRNTQQQMSYREQVLHKQLTRILGVPDLVFLLFSFISTANNSTHALEYVLFRPNRRYNQRISLAIPNLGNTSQQEYKVSSVPNTSQSYAKVIKEHGTDFFDKDGVMKDIRAIYQVYNALQEKVQAVCADVEKSERVVESCQAEVNKLRRQITQRKNEKEQERRLQQAVLSRQMPSESLDPAFSPRMPSSGFAAEGRSTLGDAEASDPPPPYSDFHPNNQESTLSHSRMERSVFMPRPQAVGSSNYASTSAGLKYPGSGADLPPPQRAAGDSGEDSDDSDYENLIDPTEPSNSEYSHSKDSRPMAHPDEDPRNTQTSQI", - "output": "BRISC complex ; cytoplasm ; cytosol ; microtubule ; nucleus ; spindle pole ; microtubule binding ; polyubiquitin modification-dependent protein binding ; attachment of spindle microtubules to kinetochore ; cell division ; chromosome segregation ; mitotic cell cycle ; mitotic spindle assembly ; protein K63-linked deubiquitination ; response to ischemia" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MNDLIINHIAELILPRSTDKPLKGKELDELNVVKNGTVVIKDGKIVYAGQHTDDYDATETIDASGKVVSPALVDAHTHLTFGGSREHEMSLKRQGKSYLEILEMGGGILSTVNATRETSEDDLFKKAEHDLLTMIKHGVLAVESKSGYGLDRENELKQLKVSNRLAEKHDLDMKHTFLGPHAVPKEASSNEAFLEEMIALLPEVKQYADFADIFCETGVFTIEQSQHYMQKAKEAGFKVKIHADEIDPLGGLELAIDEQAISADHLVASSDKGKEKLRNSDTVAVLLPATTFYLGKEDYADARGMLDNNGAIALATDYNPGSSVTNNLQLVMAIAALKLKLSPNEVWNAVTVNAAKAIDINAGTINTGDKANLVIWDAPNHEYIPYHFGINHAEKVIKDGKVIVDNTLSFKA", - "output": "cytoplasm ; imidazolonepropionase activity ; iron ion binding ; zinc ion binding ; histidine catabolic process to glutamate and formamide ; histidine catabolic process to glutamate and formate" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MSKKLHVVSLGCTKNLVDTEVMLARLPEYEITQIPEEADLIIVNTCGFIGPAKEESLQTVFDLHSRRKKDSTLVMAGCLSERYKEELQKEMPEVDIFTGVGDYAKIDELISQKKSSFSDQVYLIRSEERIITGSNYHAYIKLSEGCNQQCSFCAIPSFKGKLQSRPIEDIVQEIKNLVAKGYKDFTFVSQDSSSYLRDFGIQESLVDLIHAVEEIEGIMSARILYLYPSTTTPKMIDAIANSPVFVNYFEMPIQHISDSLLKKMKRGIGAQKTKELLYAMRAVPESFLRTSLIVGHPGESEEDFHELVEFLEDFEFDRINLFAYSDEEGTKAYEMEEKIPQEVIEERLAILDAIVKKQQMKSLEKDLGKTVECYLDGTSEESELLLSGRKKIWAPEVDGEILINDSEIDNLQIGNLYKVHINERLGDKLVGTVRA", - "output": "cytoplasm ; 4 iron, 4 sulfur cluster binding ; metal ion binding ; protein methylthiotransferase activity ; peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid ; tRNA modification" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MDSRPQKIWMAPSLTESDMDYHKILTAGLSVQQGIVRQRVIPVYQVNNLEEICQLIIQAFEAGVDFQESADSFLLMLCLHHAYQGDYKLFLESGAVKYLEGHGFRFEVKKRDGVKRLEELLPAVSSGKNIKRTLAAMPEEETTEANAGQFLSFASLFLPKLVVGEKACLEKVQRQIQVHAEQGLIQYPTAWQSVGHMMVIFRLMRTNFLIKFLLIHQGMHMVAGHDANDAVISNSVAQARFSGLLIVKTVLDHILQKTERGVRLHPLARTAKVKNEVNSFKAALSSLAKHGEYAPFARLLNLSGVNNLEHGLFPQLSAIALGVATAHGSTLAGVNVGEQYQQLREAATEAEKQLQQYAESRELDHLGLDDQEKKILMNFHQKKNEISFQQTNAMVTLRKERLAKLTEAITAASLPKTSGHYDDDDDIPFPGPINDDDNPGHQDDDPTDSQDTTIPDVVVDPDDGSYGEYQSYSENGMNAPDDLVLFDLDEDDEDTKPVPNRSTKGGQQKNSQKGQHIEGRQTQSRPIQNVPGPHRTIHHASAPLTDNDRRNEPSGSTSPRMLTPINEEADPLDDADDETSSLPPLESDDEEQDRDGTSNRTPTVAPPAPVYRDHSEKKELPQDEQQDQDHTQEARNQDSDNTQSEHSFEEMYRHILRSQGPFDAVLYYHMMKDEPVVFSTSDGKEYTYPDSLEEEYPPWLTEKEAMNEENRFVTLDGQQFYWPVMNHKNKFMAILQHHQ", - "output": "helical viral capsid ; host cell cytoplasm ; ribonucleoprotein complex ; viral nucleocapsid ; RNA binding ; viral RNA genome packaging" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MENKLSFEEAISQLEHLVSKLEQGDVPLEEAISYFKEGMELSKLCDEKLKDVQEQMAVILGEDGELKPFTALGDEA", - "output": "cytoplasm ; exodeoxyribonuclease VII complex ; exodeoxyribonuclease VII activity ; DNA catabolic process" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MRTLCSLLLICCLLFSYTTPAVGDLKHLILKAQLTRCYKFGGFCHYNICPGNSRFMSNCHPENLRCCKNIKQF", - "output": "extracellular space ; CCR6 chemokine receptor binding ; defense response to Gram-negative bacterium ; defense response to Gram-positive bacterium ; innate immune response in mucosa" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MDLRVIENLETELAIEIEGEDHTFMNVLKGALLELDGVTAATYDVNPEQSGGQTEPIVTIKTDGSIDPLDALEQGASRVRDKTDAFEEAFEAAA", - "output": "cytoplasm ; DNA-directed RNA polymerase complex ; DNA binding ; DNA-directed 5'-3' RNA polymerase activity ; protein dimerization activity ; DNA-templated transcription" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MAADEELSGVWQARVVTLFPDAFPGVLGLSLTGKALQDGRWQLHTHDLRSFGVGKHRNVDDTPAGGGAGMVMRADVVGPAIEAAQRFARGRWPILYMSPRGRPFTQKMAKDLARCDGVTVLCGRFEGVDERVLEHFGVTEVSIGDYVLTGGEIAAQTVLDATVRLLPGVLGNAESTVEESHSNGLLEHPQYTRPAIWEGHAIPEVLMSGNHAEIAKWRAAQSHRLTQSRRPDLWAAKGAKE", - "output": "cytoplasm ; tRNA (guanine(37)-N(1))-methyltransferase activity" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MQRTLLLAKIHNCTLTGANINYVGSISIDEILLEKAGILPYEQVQVVNSANGQRFITYAIPAPAHSGVIELNGGAARLGIIGDRLIIMTYGQFTPEELKNYSPTVVIVDEKNRLLEVRRYDDLLVKV", - "output": "cytoplasm ; aspartate 1-decarboxylase activity ; alanine biosynthetic process ; pantothenate biosynthetic process" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MAKLSLINRDIKRAKLADKYAAKRAELKAIIDDQSKTDEERYQARLKLQQLPRNANPTRQRNRCVVTGRPRGVFRKFGLTRHKLREMAMKGEIPGITKASW", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MAYIEGNTGKWEYVIGLEIHAQISSKSKLFSGSSTIFAANPNSQVSYVDAAMPGMLPVLNKHCVHQAIKTGLGLKAKINKYSVFDRKNYFYADLPQGYQISQFYYPIVQNGTMEIPTSTGDLKTIRINRLHLEQDAGKSMHDQSPHYSFIDLNRAGIGLMEIVTEPDISSPEEAAEFVKKLRNLLRYIGSCDGDMEKGSMRCDANISVRRSGEPLGTRCEIKNINSIRNIIKAIEFEAKRQVDLLESGEKIIQETRLFNADSGETRTMRLKEEALDYRYFPDPDLLPLVISDELINELKANLPELPDQKIEKYTKEFSLSKYDAEVIVADESVAEYFEKAANECNPKMLTNWLTSELFGQLNKASIGINECKITPSNFAKLVKLIENDTISGKIAKTVFEIMFETGKAPDKIVEEKGLVQVSDNNVLNTVIDEVIAENPESVEGYRSGKDKLFGFFVGQVMKKTGGKANPTLVNQLLKEKLSS", - "output": "asparaginyl-tRNA synthase (glutamine-hydrolyzing) activity ; ATP binding ; glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity ; translation" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MAAPTTEHAETIVPALCRRFGGETFVQQTTADGISTLWLPARILVETIRYLRSEIDRPYALLFDLTAVDERVRKHRDGMPASAYTVVYHLVSLERNADVRLKIALPETDPALPSIVAVCPAANWYEREVWDMFGIRFDGHPNLRRLIMPPTWQGHPLRKDHPARATEMEPFSLPDDVQQQEQEALRFVPEEWGMQRQSEDTDFLFLNLGPNHPSVHGVFRVALQLDGEEIVDAVPDIGYHHRGAEKMGERQSWHSYIPYTDRIDYLGGSMNNLPYVMAVEKLAGIEVPERARVIRVMISEFYRIASHLLFYGTFAQDVGQMSPIFYMFIDRERVFEIIESFTGARMHSSFFRIGGVAMDLPEGWDRLIREFIAYFPRRLAEYDKAVMANKLIQRRTRGIGAYTTTEAIDWSVTGAGLRATGLPWDYRKARPYSGYENFEFDVPTGTNGDCYDRCAVRVEEMRQSLRIIEQCVEHMPSGPYKAEHPLTTPPPKERTMHDIETLIQHFLSVSWGPVIPPGEVCVTIEATKGLNGYYLTSDGGTMSYRTRIRTPSFPHLQMIPLMSRGMMVADLIAILASIDFVMADVDR", - "output": "plasma membrane respiratory chain complex I ; NAD binding ; NADH dehydrogenase (ubiquinone) activity ; quinone binding ; respiratory electron transport chain" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "EFFHGWYMEPLTKGRYPDIMRQIVGTRLPNFTEDEAELVAGSYDFLGLNYYVTQYAKPKPNPYPSEKHTAMDDAGVDLTFKNSRGEYPGPVFAEDANSYYYPKGIYYVMDYFKTKYGNPLIYITENGISTPGSESRCERIADYKRINYHCSHLCFLSKVIKEKGVNVRGYFAWALGDNYEFGKGFTVRFGLSYVNWDDLNDRNLKESGKWYQRFINGTAKNPVKQNFLRSSLSSQNQKKRLAC", - "output": "vacuole ; glucosinolate glucohydrolase activity ; thioglucosidase activity ; carbohydrate metabolic process" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MTTEHKSGFVAIVGRPNVGKSTLLNRIVGQKIAIMSDKAQTTRNKIQGIYTIPEAQIVFIDTPGIHKPKHRLGDFMVESAYNAMREVDATLFMVSADQKRGKGDDFIIERLKNNNSPVYLIINKIDKVHPDDLLSIIEDYSKQMDFKEIIPISATEGNNFEHLMDVLVEQMPEGPQYFPDDQITDHPEYFIVSELIREKVLLLTRDEIPHSVAVVVDSMKRDENDKVHVQATIIVERDSQKGIIIGKGGKMLKQIGTKARQDIEYLLDDKVYLELWVKVQKDWRDKKIYLQDFGYRKEEY", - "output": "cytoplasm ; plasma membrane ; GTP binding ; GTPase activity ; small ribosomal subunit rRNA binding ; ribosomal small subunit biogenesis" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MGFFKKKEKKAEFDVFRLYGLHHPEPGKCDEITTRGYSISMSVDKARRVIDQIRGRSYAETLMILELMPYRACYPIFKLIYSAAANASHNKQFNKANLIISKAEVNKGITLKKVKPRARGRSYMIKRPTCHITIVLRDITHFDSYDKFLESLTPKKLIALLGLMSTGRRRELLCGRFRENHKIKSFLYKIALFKRYEVM", - "output": "chloroplast ; large ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; ribosome assembly ; translation" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MEQVNELKEKGNKALSAGNIDDALQCYSEAIKLDPQNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNLQLKEGLQNMEARLAERKFMNPFNLPNLYQKLENDPRTRTLLSDPTYRELIEQLRNKPSDLGTKIQDPRIMTTLSVLLGVDLGSMDEEEEAATPPPPPPSKKEAKPEPMEEDLPENKKQALKEKEMGNEAYKKKDFDMALKHYDRAKELDPTNMTYITNQAAVHFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAYARIGNSYFKEERYKDAIHFYNKSLAEHRTPDVLKKCQQAEKILKEQERLAYINPDLALEEKNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALELDSSCKEAADGYQRCMMAQYNRHDSPEDVKRRAMADPEVQQIMSDPAMRLILEQMQKDPQALSEHLKNPVIAQKIQKLMDVGLIAIR", - "output": "dynein axonemal particle ; nucleus" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MELRHLRYFVAVAQALNFTRAAEKLHTSQPSLSSQIRDLENCVGVPLLVRDKRKVALTAAGECFLQDALAILEQAENAKLRARKIVQEDRQLTIGFVPSAEVNLLPKVLPMFRLRQPDTLIELVSLITTQQEEKIRRGELDVGLMRHPVYSPEIDYLELFDEPLVVVLPVDHPLAHEKEITAAQLDGVNFVSTDPVYSGSLAPIVKAWFAQENSQPNIVQVATNILVTMNLVGMGLGVTLIPGYMNNFNTGQVVFRPIAGNVPSIALLMAWKKGEMKPALRDFIAIVQERLASVTA", - "output": "protein-DNA complex ; DNA binding ; DNA-binding transcription factor activity ; negative regulation of DNA-templated transcription ; positive regulation of DNA-templated transcription ; regulation of DNA-templated transcription" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MPRFVDRVVIHAKAGTGGHGCASVHREKFKPLGGPDGGNGGRGGSVILEVDPQVHTLLDFHFHPHLQAPNGTQGMGGHRNGANGDDLILKVPDGTVVLDDDGRILADLVGAGARFDAAAGGRGGLGNAALASRARKAPGFALLGEAGAEVDLTLELKTVADVGLVGFPSAGKSSLVSVLSAAKPKIADYPFTTLVPNLGVVTTGENSFVMADVPGLIPGAAEGRGLGLEFLRHIERCAVLVHVVDCATLEPGRDPVSDIDALENELARYQPTLQDDSVLGDLADRPRAVVLNKVDVPEADELADFVTEEVSQRGWPVFKVSTLTRDGLRPLTFALWEMIVAARAARPEPVKTRPVIRPIPVDESGFTVSADPQNPGGFVVRGVRPERWIRQTNFENDEAVGYLGDRLARLGVEDELLKLGAEPGCAVTIGDMTFDWEPQTPAGVDVTMSGRGTDARIDKTDRVGAAERRQARRVRRGQVEPE", - "output": "cytoplasm ; GTP binding ; GTPase activity ; magnesium ion binding ; ribosome biogenesis" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MNFLAHLHLAHLAESSLSGNLLADFVRGNPEESFPPDVVAGIHMHRRIDVLTDNLPEVREAREWFRSETRRVAPITLDVMWDHFLSRHWSQLSPDFPLQEFVCYAREQVMTILPDSPPRFINLNNYLWSEQWLVRYRDMDFIQNVLNGMASRRPRLDALRDSWYDLDAHYDALETRFWQFYPRMMAQASHKAL", - "output": "phosphodiesterase activity ; fatty acid biosynthetic process" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MDTSHSDTVLIIDFGSQVTQLIARRVRAMGVYSEIVPFQSALGGINRIKPKAVILSGSPYSTLDNGSPRAPIEVFEAGIPVLGICYGQQVMCVQLGGKVEAGHEREFGRAFLEIKEESALFDGVWEKGSSQQVWMSHGDRVTALPEGFCVIGTSKGAPYAAISDEKRNFYAVQFHPEVVHTPDGEKLLQNFVCKISGIKNNWSMAAYRDQAIAAIREKVGKNRVICGLSGGVDSSVTAVLLHEAIGDQLTCIFVDHGLIRKNEAEEVLKLFRDNYNIELIHVNAADMFINALEGETDPEKKRKTIGRLFIEVFEEETKKIGGAKFLAQGTLYPDVIESVSAIGEAITIKSHHNVGGLPERMNMKLVEPLRELFKDDVRSLGRELGLPEEFIKRHPFPGPGLAIRCPGAVTREKIEILREADAIYLDEIRKAGLYDKIWQAFAILLPVQTVGVMGDGRTYEFVCALRAVTSVDGMTADFYPHDMDFLSRTAARIINEVRGINRVVYDITSKPPGTIEWE", - "output": "ATP binding ; GMP synthase activity ; glutamine metabolic process" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MGPGGRVARLLAPLMWRRAVSSVAGSAVGAEPGLRLLAVQRLPVGAAFCRACQTPNFVRGLHSEPGLEERAEGTVNEGRPESDAADHTGPKFDIDMMVSLLRQENARDICVIQVPPEMRYTDYFVIVSGTSTRHLHAMAFYVVKMYKHLKCKRDPHVKIEGKDTDDWLCVDFGSMVIHLMLPETREIYELEKLWTLRSYDDQLAQIAPETVPEDFILGIEDDTSSVTPVELKCE", - "output": "cytosol ; mitochondrial matrix ; mitochondrion ; mitochondrial large ribosomal subunit binding ; ribosomal large subunit binding ; negative regulation of mitochondrial translation ; negative regulation of ribosome biogenesis ; negative regulation of translation ; ribosomal large subunit biogenesis" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MTNLQELPSRGHLLTEQINPASQNLDQLTPLELVDLFNQEDAHTLRAIAQAREALAQTISATAARLRQGGRLFYIGAGTSGRLGVLDAAECPPTFCTPPHLVQGILAGGDAALVRSSEGLEDRYEDGAAVVGDRQITAQDVVIGISAGGTTPYVHGALDAAQGVGALTVFMACVPVEQVQRSADIDIRLLVGPELLAGSTRLKAGTATKMALNIISTGVMVQLGKVYGNRMVDVAVSNRKLLDRALRILTDVTGMDRAAAAALLERSGYQVKRALLMHWTGLDAPAAQALLDQQNGQLHAARSAALDP", - "output": "carbohydrate derivative binding ; carbon-oxygen lyase activity ; amino sugar catabolic process ; carbohydrate metabolic process ; N-acetylmuramic acid catabolic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MSAEVPEAASAEEQKEMEDKVTSPEKAEEAKLKARYPHLGQKPGGSDFLRKRLQKGQKYFDSGDYNMAKAKMKNKQLPTAAPDKTEVTGDHIPTPQDLPQRKPSLVASKLAG", - "output": "cytoplasm ; nucleoplasm ; phosphatase inhibitor activity ; potassium channel regulator activity ; protein phosphatase 2A binding ; protein phosphatase inhibitor activity ; protein phosphatase regulator activity ; signaling receptor binding ; cell division ; G2/M transition of mitotic cell cycle ; mitotic cell cycle ; negative regulation of protein dephosphorylation ; positive regulation of gluconeogenesis ; positive regulation of glucose import" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MRILLSNDDGYLAPGLAALYEALRPLAEILVMAPEQNCSGASNSLTLSRPLSVSRSAATGFYYVNGTPTDSVHVALTGMLDTKPDLVVSGINNGQNMGDDTLYSGTVAAATEGIMFGVPAIAFSLVHKEWAHLGDAARVAAEIVRHYLDHPLPGQPLLNINIPNLPYEELKGWRVTRLGKRHPSQPVIRQTNPRGEPIYWIGAAGDALDASEGTDFHATASGYVSITPLQLDLTHTQMLAATRDWARAGSGAS", - "output": "cytoplasm ; metal ion binding ; nucleotide binding ; XMP 5'-nucleosidase activity" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MNPIVKSFEYGQHTVTLETGVIARQADAAVLASMGDTTVLVTVVGKKAEEPGRDFFPLTVNYQEKTYAAGKIPGGFFKREGRPSESETLIARLIDRPIRPLFPNGFKNEVQVIITVVSVDPEINPDIISMIGTSAALAISGLPFNGPLGVARVGYTNGEYVLNPDVTQLVDSELDLVVAGTEGAVLMVESEAASLPEEVMLGGVVYGHEQQQVVINAISELKAEASKPAWDWTAPVQDQELVAKIKDLAEAGLTEAYQIEVKQDRYTQVGVIKSAAKEALLAENPEADLREIDGLLGSLEKKVVRSRIIAGNPRIDGREPDMVRALNVMAGVLPRTHGSSLFTRGETQALVTCTLGTERDAQKVDSIMGEYTNRFMLHYNFPPYSVGETGFVGSPKRREIGHGKLAWRGINAVMPSAEEFPYSVRVVSEITESNGSSSMASVCGTSLALMDAGVPIKTSVAGIAMGLVKEGDDFVVLSDILGDEDHLGDMDFKVAGTRDGITALQMDIKIEGITKDIMQIALQQAYGARVHILNVMDQAIGSHREDISDHAPRITTLKINPEKIRDVIGKGGATIRALTEETGTTIELEDDGTVKIASSNGEATKEAIRRIEEITAEVEVGTVYNGKVVRIVDFGAFVTILPGKDGLVHISQIAEERVANVSDYLEVGQEVKVKVMEVDRQGRVRLSMKEAAPKAEAPAAE", - "output": "cytoplasm ; magnesium ion binding ; polyribonucleotide nucleotidyltransferase activity ; RNA binding ; mRNA catabolic process ; RNA processing" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MASSSNWLSGVNVVLVMAYGSLVFVLLFIFVKRQIMRFAMKSRRGPHVPVGHNAPKDLKEEIDIRLSRVQDIKYEPQLLADDDTRLLQLETQGSQKIPFHAEGRHPCSLMGKNFRSYLLDLRNTSTPFKGVRKALIDTLLDGYETARYGTGVFGQSEYLRYQEALSELATVVKARIGSSQRQHQSAAKDLTQSPEMSPTTIQVTYLPSSQKSKRPKHFLELKSFKDNYNTLESTL", - "output": "Golgi apparatus ; membrane ; mitochondrion ; in utero embryonic development ; phagocytosis" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MPTTQQSPQDEQEKLLDEAIQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSPKSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVKSFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDEGEPTDEETTGDISDSMDFVLLNFAEMNKLWVRMQHQGHSRDREKRERERQELRILVGTNLVRLSQLEGVNVERYKQIVLTGILEQVVNCRDALAQEYLMECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNIIIALIDRLALFAHREDGPGIPADIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLAMKCYPDRVDYVDKVLETTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILTVLKLKHFHPLFEYFDYESRKSMSCYVLSNVLDYNTEIVSQDQVDSIMNLVSTLIQDQPDQPVEDPDPEDFADEQSLVGRFIHLLRSEDPDQQYLILNTARKHFGAGGNQRIRFTLPPLVFAAYQLAFRYKENSKVDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFENHETVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMKCFSEENHEPLRTQCALAASKLLKKPDQGRAVSTCAHLFWSGRNTDKNGEELHGGKRVMECLKKALKIANQCMDPSLQVQLFIEILNRYIYFYEKENDAVTIQVLNQLIQKIREDLPNLESSEETEQINKHFHNTLEHLRLRRESPESEGPIYEGLIL", - "output": "cytosol ; dopaminergic synapse ; early endosome ; endosome ; endosome membrane ; extracellular exosome ; glutamatergic synapse ; late endosome ; lysosomal membrane ; lysosome ; mitochondrion-derived vesicle ; neuron projection ; neuronal cell body ; perinuclear region of cytoplasm ; postsynaptic density ; presynapse ; retromer complex ; retromer, cargo-selective complex ; tubular endosome ; D1 dopamine receptor binding ; endocytic recycling ; intracellular protein transport ; lysosome organization ; mitochondrial fragmentation involved in apoptotic process ; mitochondrion to lysosome transport ; modulation of chemical synaptic transmission ; negative regulation of cell death ; negative regulation of gene expression ; negative regulation of inflammatory response ; negative regulation of late endosome to lysosome transport ; negative regulation of lysosomal protein catabolic process ; negative regulation of neuron death ; negative regulation of protein homooligomerization ; negative regulation of protein localization ; neurotransmitter receptor transport, endosome to plasma membrane ; neurotransmitter receptor transport, endosome to postsynaptic membrane ; positive regulation of canonical Wnt signaling pathway ; positive regulation of dopamine biosynthetic process ; positive regulation of dopamine receptor signaling pathway ; positive regulation of gene expression ; positive regulation of locomotion involved in locomotory behavior ; positive regulation of mitochondrial fission ; positive regulation of protein catabolic process ; positive regulation of Wnt protein secretion ; protein destabilization ; protein localization to endosome ; regulation of dendritic spine maintenance ; regulation of macroautophagy ; regulation of mitochondrion organization ; regulation of postsynapse assembly ; regulation of presynapse assembly ; regulation of protein metabolic process ; regulation of protein stability ; regulation of synapse maturation ; regulation of terminal button organization ; retrograde transport, endosome to Golgi ; transcytosis ; vesicle-mediated transport in synapse ; voluntary musculoskeletal movement ; Wnt signaling pathway" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MSKIIGIDLGTTNSAVAVLEGTESKIIANPEGNRTTPSVVSFKNGEIIVGDAAKRQAVTNPDTVISIKSKMGTSEKVSANGKEYTPQEISAMILQYLKGYAEDYLGEKVEKAVITVPAYFNDAQRQATKDAGKIAGLEVERIVNEPTAAALAYGMDKTDKDEKILVFDLGGGTFDVSILELGDGVFDVLATAGDNKLGGDDFDQKIIDFLVAEFKKENGIDLSQDKMALQRLKDAAEKAKKDLSGVTQTQISLPFITAGSAGPLHLEMSLSRAKFDDLTRDLVERTKTPVRQALSDAGLSLSEIDEVILVGGSTRIPAVVEAVKAETGKEPNKSVNPDEVVAMGAAIQGGVITGDVKDVVLLDVTPLSLGIETMGGVFTKLIDRNTTIPTSKSQVFSTAADNQPAVDIHVLQGERPMAADNKTLGRFQLTDIPAAPRGIPQIEVTFDIDKNGIVSVKAKDLGTQKEQHIVIKSNDGLSEEEIDRMMKDAEANAEADAKRKEEVDLKNEVDQAIFATEKTIKETEGKGFDTERDAAQSALDELKAAQESGNLDDMKAKLEALNEKAQALAVKMYEQAAAAQQAAQGTEGAQANDSANNDDVVDGEFTEK", - "output": "ATP binding ; ATP-dependent protein folding chaperone ; unfolded protein binding" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MTEKVKKLSPRRRARECAVQTLYSWAISKNAPEEIELNFIVDQDNEMKGVDMPYFRKLFRQTVDHVEIVDSIMAPYLDRDNVELDPIECAILRLAVYELKFELDVPYKVVINEAIEVAKVFGAEESHKYINGVLDKIAPALSRK", - "output": "RNA binding ; DNA-templated transcription termination ; transcription antitermination" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MLKLIIPTIMLLPLTWFSKKRMIWINTTTHSLIISTIPLLFFNQINNNLFSCSLSFSSDPLTTPLLMLTAWLLPLTIMASQRHLSNEPPSRKKLYLSMLISLQISLIMTFSATELIMFYIFFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPLLIALIYTHNTLGSLNILLLTLTAQELSNTWANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTLILNPLTKHMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLFCLANSNYERTHSRIMILSQGLQTLLPLMAFWWLLASLANLALPPTINLLGELSVLVTSFSWSNTTLLLTGFNMLITALYSLYMFTTTQWGSLTHHINNMKPSFTRENTLMFMHLSPILLLSLNPDIITGFTS", - "output": "mitochondrial inner membrane ; mitochondrial respiratory chain complex I ; NADH dehydrogenase (ubiquinone) activity ; mitochondrial electron transport, NADH to ubiquinone ; mitochondrial respiratory chain complex I assembly" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MAYPLQMGLQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTQELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMTMRPGLYYGQCSEICGSNHSFMPIVLELVPLSHFEKWSTSML", - "output": "mitochondrial inner membrane ; respiratory chain complex IV ; copper ion binding ; cytochrome-c oxidase activity" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MIEADRLIAPISNHFKDEEVIDRAIRPKKLADYQGQDHVRDQMEIFIQAAQMRQEALDHLLIFGPPGLGKTTLANIVANEMGVNIRTTSGPVLEKAGDLAALLTNLEENDVLFIDEIHRLSPMVEEVLYPAMEDYQLDIMIGEGPAARSIKIDLPPFTLIGATTRAGSLTSPLRDRFGIVQRLEYYKVADLQHIVQRSAQCLGLSMDSEGALEVARRARGTPRIANRLLRRVRDYAEVKGDGHICAQTADRALNMLDVDHQGFDYMDRKLLLAIMEKFSGGPVGIDNLAAAIGEEKDTIEDVLEPFLIQQGYLQRTPRGRIATDRAYLHFGIEK", - "output": "cytoplasm ; ATP binding ; ATP hydrolysis activity ; DNA binding ; four-way junction helicase activity ; DNA recombination ; DNA repair ; SOS response" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MKTLLLTLVVVTIVCLDLGYTLTCLICPEKYCNKVHTCLNGEKICFKKYDQRKLLGKGYIRGCADTCPKLQNRDVIFCCSTDKCNL", - "output": "extracellular region ; acetylcholine receptor inhibitor activity ; ion channel regulator activity ; toxin activity" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MMKELHPELRENVRLLGELLGQSIRYHLGDEIFNKIEKIRIAAKADRNAEISQRKQLKEVLSGLNDEELAPVARAFNQFLNLTNIAEQYHIVRRRAPASELVDNRLDTIEVVFDRLIGQGVSKDKFFAQLADLNLEFVLTAHPTEITRRTLIQKYDQISECLESLDRSDLLDEEYAKIVERLRRLITEAWHTDEIRYERPTAVDEAKWGFAVIENSLWQAVPDFMRQMDAALLERFGEGLPINVNPVRFASWMGGDRDGNPNVTSEVTREVFLLSRWMAADLYLRDIEALRSELSMTACNGELARASGQSREPYRKILAKLRSRLEATRAWAAEALDSTKKPAAEVLLNNAELIEPLMVCYRSLRDCGMEVIANGPLLDVIRRAQCFGLQLVRLDIRQDSERHSDVMKEICAYLGIGDYSQWTEEEKQAFLIRELEGRRPLLPKEWPASAEAREVLDTCRVVAMQPPEGLASYVISMASDPSDVLTVILLLRESGMRHHIPIAPLFETLSDLQGAADSIGRLLDLPWYREYIGGKQEVMIGYSDSAKDAGQMAAAWAQYQAQEALVKVAAKHDVKLTLFHGRGGTVGRGGGPANRAILSQPPGSVAGNFRITEQGEMIRFKFGQPKVAKQSFNLYLGAVLEASLVPPPEPEPAWREMMDKLSHLAVNSYREVVRERPGFVEYFRSATPEQELGKLALGSRPARRKASGGVESLRAIPWIFAWTQMRLMLPAWLGSDTALQTAVDDGGADTLKAMLTGWPFFETHVDMLEMVLSKVDPEIARFYEERLVKPELHPLGDELRRRAGCAVRLINELKGQDELLLDNPVFMHSLQVRNPYTDPLHFLQVELLVRDRAEGETNKETVEKALKVTMAGVAAGMRNTG", - "output": "magnesium ion binding ; phosphoenolpyruvate carboxylase activity ; carbon fixation ; oxaloacetate metabolic process ; tricarboxylic acid cycle" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MNERSLRVLEYNKIIHMLEDKCTSSLGREKLKELKPISNFEQITTWQKETSEAQSILIHRGNIPLGGIHDVSQYLRRTEIGSYLDPGQLLQLKETLAAARRMKTFLKDDKKESTYPIIQELGNNISSLKHIEDKIELCIISETELSDNASPELRNIRRQISSKNDAIRNKLNSIITSASNQKYLQDPIITMRQDRYVVPVKQEHRGNIPGLIHDQSSSGATIFVEPMAVVELNNQLKELRLKEQVEIERILMEIAAMIAERSDDIKSNQIILKELDFIFAKGKLSVEMRAVEPVLNTNKKISIKNGRHPLLPSNKVVPNTMWLGEDFHTLVITGPNTGGKTVTLKTLGLLTLMAQSGLHVPADYGTKLAIFDQVFADIGDEQSIEQSLSTFSSHMTNIVNIMDNVTEQSLVLFDELGAGTDPTEGAALAMAILNSLREMGTVTVATTHYSELKQYALSTEGVENASVEFDVNTLSPTYKLLIGVPGKSNAFEISRKLGLSDFLIQRSKELLTREDIQFEDLLQNIEKNRSTAEKEKDEAARLRMETQKLREEYYEKKQQLQTQKEKLISDAKREAYKIVKQAKLDADEIVENLKTLRAELEEKEMNKKIEEARKNLSDQMGKLAENMGEKLVLKTNKKPPKNLKIGESVNILSLNQIGYVILPEDANGEVQLQVGIMKVNMHVSNLERIKEEKDTKKTGVGKIVKSKAENIKMEIDVRGQNLEEAMLNVDKYLDDAYIAGLTHVTIIHGVGTGVLSAGLKQMLKKHKHTKSFREGEYGEGGMGVTIVHLK", - "output": "ATP binding ; ATP hydrolysis activity ; ATP-dependent DNA damage sensor activity ; endonuclease activity ; mismatched DNA binding ; mismatch repair ; negative regulation of DNA recombination" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MEQYTIKFNQINHKLTDLRSLNIDHLYAYQFEKIALIGGNGTGKTTLLNMIAQKTKPESGTVETNGEIQYFEQLNMDVENDFNTLDGSLMSELHIPMHTTDSMSGGEKAKYKLANVISNYSPILLLDEPTNHLDKIGKDYLNNILKYYYGTLIIVSHDRALIDQIADTIWDIQEDGTIRVFKGNYTQYQNQYEQEQLEQQRKYEQYISEKQRLSQASKAKRNQAQQMAQASSKQKNKSIAPDRLSASKEKGTVEKAAQKQAKHIEKRMEHLEEVEKPQSYHEFNFPQNKIYDIHNNYPIIAQNLTLVKGSQKLLTQVRFQIPYGKNIALVGANGVGKTTLLEAIYHQIEGIDCSPKVQMAYYRQLAYEDMRDVSLLQYLMDETDSSESFSRAILNNLGLNEALERSCNVLSGGERTKLSLAVLFSTKANMLILDEPTNFLDIKTLEALEMFMNKYPGIILFTSHDTRFVKHVSDKKWELTGQSIHDIT", - "output": "ATP binding ; ATP hydrolysis activity ; response to antibiotic" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MHAFLGNAQLPSTPRGDRLEFSEWYAEVLRSAEIMDVRYPVKGMYVWLPYGFEIRQRVVEKLRRKLRETGHEEVLFPTLIPETQLKKESEHIAGFEDEVYWVTHGGLKELDEKLALRPTSETAIYPMFALWIRSHADLPLKIFQIVNTFRYETKHTRPLIRMREITTFKEAHTAHATEEEAEEQVKEAVEIYSSFFDELGIPYIASVRPEWDKFPGAEYTVAFDTLMPDGRTLQIGTVHMLGQNFARTFEVTYETEEGDQEYVYMTCYGISDRVVASMIAIHGDERGLVLPPDVAPYQVVMVPILKKGVRRKILERAAEVEEMLREEGVRVKVDDRDMSPGRKFHYWELKGVPLRIELGARELEEGTAVVFRRDELERETYAFEELPDVVPELLEDIAMELRKRAREKFEKGIFRTDSPEEARRLVGEGIVETGWCGSERCGVRMEEEFGGDVLGTPYPEEDTEFERCPICGETAEYTVRIAKTY", - "output": "cytoplasm ; ATP binding ; proline-tRNA ligase activity ; prolyl-tRNA aminoacylation" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MEDPQPLPQSELPLCDSLIIWLQTFKTASPCQDVKQLTNGVTMAQVLHQIDVAWFSESWLSRIKDDVGDNWRIKASNLKKVLHGITSYYHEFLGQQISEELIPDLNQITECADPVELGRLLQLILGCAVNCEKKQEHIKNIMTLEESVQHVVMTAIQELMSKEIVISPASDTVGELEQQLKRALEELQEAIAEKEELKQRCQELDMQVTTLQDEKNSLVSENEMMNEKLDQLDGSFDDPNTMVAKKYFHVQLQLEQLQEENYRLEAAKDDYRVHCEELEKQLIEFQHRNDELTSLAEETRALKDEIDVLRATSDKANKLESTVEVYRQKLQDLNDLRKQVKSLQETNMMYMHNTVSLEEELKKANAARAQLETYKRQVQDLHTKLSSESKRADTLAFEMKRLEEKHETLLKEKERLIEQRDTLKETNEELRCSKAQQDHLNQADASATKSYENLAAEIMPVEYREVFIRLQHENKMLRLQQEGTENERIEQLQEQLEQKHRKMNELETEQRLSKERIGELQQQIEDLQKSLQEQGSKSEGESSSKLKQKLEAHMEKLTEVHEELQKKQELIEDLQPDISQNAQKISELEAALQKKDEDMKAMEERYKMYLEKARNVIKTLDPKLNPASAEIMLLRKQLAEKERRIEILESECKVAKLRDYEEKLIVSAWYNKSLAFQKLGMESRLVSGASACKDSVAAAPARSFLAQQRHITNTRRNLSVKVPAAASD", - "output": "centrosome ; cytoplasm ; cytosol ; FHF complex ; HOPS complex ; microtubule ; microtubule cytoskeleton ; actin binding ; dynein light intermediate chain binding ; identical protein binding ; microtubule binding ; protein homodimerization activity ; cytoplasmic microtubule organization ; cytoskeleton-dependent intracellular transport ; early endosome to late endosome transport ; endosome organization ; endosome to lysosome transport ; Golgi organization ; lysosome organization ; manchette assembly ; protein localization to perinuclear region of cytoplasm ; protein transport ; spermatid development" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MSGPNRTYSFGEGDDSLAHPSSRTHAMHSQYDDVSPISDGARMNPMNGQGMDHGLASVLEDGRQGWGRSPEPSPSLLTGSSATPGMDNLGPGAVGGGISGIALSVANSHDRLSGVEALMGTDGQEANIPAERGLSTTGSDNPYVPEPPEHRYSYGSNIALGAAAAPAGQLTPGQSVSHLSSTNPSQRNLYDIPYQDVGGLNAGPYQRHSAYSSNDLPVDINPDEIVDDGDDGFVPAPNSGSGARKSQAIPAAAGGAAAGGVLGNLGGLFGGKSAADTSYGPVPGAGLEAGEKGRWVKPKPGGGNKKRGWIVGAILAFIIIGAIVGGAVGGTIGHRGNEEPSSASSASSSSTQTATEDTSVNGDLDKNSAEIKALMNNKNLHKVFPGIDYTPWGVQYPLCLKYPPSQNNVTRDMAVLTQLTNNVRLYGTDCNQTEMVLHAIDKLEIKDMKIWLGVWIDSNETTSRRQIDQLYKIIDDAKDISIFNGAIVGNEALYRAGSDKTSAQTTLINYMQEVKDHFKKKNIDLPVATSDLGDNWDATLVQAADVVMANVHPFFGGIPVDQAAAWTWRFWQDHNVALTKGTNKKQIISEVGWPSGGGNDCGQGANCPNDTAGAVAGVDELNKFMEDWVCQALDNGTDYFWFEAFDEPWKIVYNTGKENWEDKWGLMDSARNLKPGLKIPDCGGKTAT", - "output": "cell surface ; extracellular region ; fungal-type cell wall ; plasma membrane ; glucan endo-1,3-beta-D-glucosidase activity ; cell wall organization ; polysaccharide catabolic process" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MGNILLQLLAVVALCIAPARSDWLPGTATFYGGADGSGTMGGACGYGNLYDQRYGINNAALSTPLFNDGASCGQCYLIICDYGKAPDWCKLGKAITVTGTNYGGWCNATRPYFDMSQPAWENIGIYSAGIVPILYQQVKCWRYGGVRFIINGFNYFELVLVTNMAGSGSIVSMSVKGSCTGWIQMTRNWGANWQCLAGLAGQALSFNVTSTGGQTIVFDDAVPAGWSFGQTFSTYHQFDY", - "output": "extracellular region ; membrane ; anatomical structure morphogenesis ; plant-type cell wall organization" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MATNKERLFAPGALGPGSGYPGAGFPFAFPGALRGSPPFEMLSPSFRGLGQPDLPKEMASLSVETQSTSSEEMVPSSPSPPPPPRVYKPCFVCNDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYTCHRDKNCIINKVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKKKKEVKEEGSPDSYELSPQLEELITKVSKAHQETFPSLCQLGKYTTNSSADHRVQLDLGLWDKFSELATKCIIKIVEFAKRLPGFTGLSIADQITLLKAACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFAFAGQLLPLEMDDTETGLLSAICLICGDRMDLEEPEKVDKLQEPLLEALRLYARRRRPSQPYMFPRMLMKITDLRGISTKGAERAITLKMEIPGPMPPLIREMLENPEMFEDDSSKPGPHPKASSEDEAPGGQGKRGQSPQPDQGP", - "output": "chromatin ; cytoplasm ; nucleoplasm ; nucleus ; transcription regulator complex ; chromatin binding ; DNA binding ; DNA-binding transcription factor activity ; nuclear receptor activity ; nuclear retinoid X receptor binding ; RNA polymerase II cis-regulatory region sequence-specific DNA binding ; sequence-specific double-stranded DNA binding ; zinc ion binding ; anterior/posterior pattern specification ; apoptotic process ; bone development ; bone morphogenesis ; cell differentiation ; cell population proliferation ; cellular response to leukemia inhibitory factor ; cellular response to retinoic acid ; chondrocyte development ; embryonic camera-type eye development ; embryonic eye morphogenesis ; embryonic hindlimb morphogenesis ; epithelium development ; face development ; gland development ; glandular epithelial cell development ; growth plate cartilage chondrocyte growth ; growth plate cartilage development ; Harderian gland development ; hormone-mediated signaling pathway ; limb development ; multicellular organism growth ; negative regulation of cartilage development ; negative regulation of cell differentiation ; negative regulation of chondrocyte differentiation ; negative regulation of stem cell proliferation ; negative regulation of transcription by RNA polymerase II ; neural tube closure ; positive regulation of apoptotic process ; positive regulation of cell population proliferation ; positive regulation of gene expression ; positive regulation of programmed cell death ; positive regulation of transcription by RNA polymerase II ; programmed cell death ; prostate gland epithelium morphogenesis ; regulation of gene expression ; regulation of myelination ; regulation of myeloid cell differentiation ; reproductive structure development ; response to retinoic acid ; retinoic acid receptor signaling pathway ; stem cell proliferation ; trachea cartilage development" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MADTANYINDRFQTFMNGLGDRYEPYVREHLSKVYMVLGSTAAATAMGAMLQMRDFLDLGVLAAVATLVLVLGLHFYKDDGKNYYTRLGMLYAFGFCSGQTLGPLLGYICSINPAIILSALTGTFVTFISLSLSALLAEQGKYLYLGGMLVSVINTMALLSLFNMVFKSYFVQVTQLYVGVFVMAAFIVYDTQNIVEKCRNGNRDVVQHALDLFFDVLSMFRRLLIILTQKEERKQNERRQNKTK", - "output": "endoplasmic reticulum membrane ; membrane ; mitochondrial membrane ; protein-containing complex ; endoribonuclease inhibitor activity ; enzyme binding ; apoptotic process ; autophagy ; cellular response to starvation ; cellular response to unfolded protein ; negative regulation of apoptotic signaling pathway ; negative regulation of autophagy ; negative regulation of cell death ; negative regulation of endoplasmic reticulum unfolded protein response ; negative regulation of endoribonuclease activity ; negative regulation of RNA splicing ; salivary gland cell autophagic cell death" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MDPNCSCPTGGSCSCAGSCTCKACRCTSCKKSCCSCCPAGCARCAQGCICKGASDKCSCCA", - "output": "cytoplasm ; nucleus ; zinc ion binding ; cellular response to copper ion ; cellular response to zinc ion ; negative regulation of growth" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MRRTVPRGTLRKIIKKHKPHLRLAANTDLLVHLSFLLFLHRLAEEARTNAFENKSKIIKPEHTIAAAKVILKKSRG", - "output": "kinetochore ; nucleoplasm ; DNA binding ; protein heterodimerization activity ; cell division ; chromosome segregation ; kinetochore assembly ; mitotic cell cycle" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MSITLSDSAAARVNIFLANRGKGFGLRLGVRTSGCSGMAYVLEFVDEPMAEDTVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLNEGFKFSNPNVKDECGCGESFHV", - "output": "2 iron, 2 sulfur cluster binding ; iron ion binding ; iron-sulfur cluster assembly" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MPTINQLVRRPRRPRESANKAPALQHNPQKRAVCVKVYTTTPKKPNSALRKVARVRIAGYGSEVIAYIPGEGHNLQEHSVVLIRGGRVKDLPGVRYHIVRGALDAKGVQGRKKARSKYGVKRGV", - "output": "small ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; tRNA binding ; translation" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MEESQGYLELYKSRQHDFLYPLIFQEYIYVLAHDHGLNRSILLENLGSDNKFSSLIVKRLITRMYQQNRLIISANDSNRNPSLGHNKDLYSQIISEGFAVIVEIPFPLRLVSSLERKEIVKSHNLRSIHSVFPFLEDKFLHLNYVSDILIPHPIHLEILVQTLRYWVKDASSLHLLRFFLYEYRNWNSLINPKKSIFVFSKRNQRLFLFLYNSHVYEYESVFVFLRTQSSHLRSTSSGALLERIYFYGKIKHLVEVFANDFQAILWLFKDTFVHYVRYQGKSILASKGTPLLMNKWKYYLVNFWQCNFYVWSQPVRIYINQLSNHSLYFLGYISSVGLNPSVVRNQMLENSFIIDNAIKKFDIIVPIIPLIGSLAKAKFCNVLGHPISKPARADSSDSDIIDRFVRICKNLSHYHSGSSKKKSLYRIKYILRLSCARTLARKHKSPVRAFLKRLGSELLEEFLTEEEQVLSLIVPASSTSRRLYRGRIWYLDIICINDLANHE", - "output": "chloroplast ; RNA binding ; mRNA processing ; RNA splicing ; tRNA processing" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MLDKSRLRIAMQKSGRLSKESQKLLEQCGIKINLQQQQLLAFAENMTIDIMRVRDDDIPGLIMDGVVDLGIIGENVLEEALLTRQSQGDNPCYVTLRRLDFGDCRLSMALPMDKPWNGPKCLQGKRIATSYPHLLKQYLDKLGINFKSCLLNGSVEVAPRAGLADAICDLVSTGATLEANGLREVEVIYRSKACLIQRSGNLSKTKQSLIDKLMIRIQGVIQARESKYIMLHAPAERLEEIINLLPGAESPTVLPLAGNQHRVAIYMVSNEALFWETMENLKNLGASSILVLPIEKMME", - "output": "cytoplasm ; ATP binding ; ATP phosphoribosyltransferase activity ; magnesium ion binding ; histidine biosynthetic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MSISKDDILNAVAEMSVMDVVALIEAMEEKFGVSASAAVAAAGPAEAADEQTEFNVVMTSFGEKKVAVIKAVRGATGLGLKEAKDLVESLGVVKEGVEKAEAEELKKTLEEAGASVEIK", - "output": "ribonucleoprotein complex ; ribosome ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MLILVTNDDGINAPGIKALSRSLARVGRVAVVAPEKERSAIGHGITMHKPLRATEVTWEGPVEMALAVNGTPADCVKLALDALLDEEPSLVVSGINMGANLGTDVLYSGTVSGALEGCINGRPSLAVSLAGEGGVDFSFAADFTSRLAGVIIKRGLPAGTLLNLNIPCLPPGEIKGLAITRLGRRRYCNTITRRLDPRGRAYYWLAGEVEDLDQEPDTDIGALGQGRISITPLHLDLTNYSYQQELAAYLSFLWPGQGNR", - "output": "cytoplasm ; metal ion binding ; nucleotide binding ; XMP 5'-nucleosidase activity" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MTHDNIDILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQVFDLVLCDVRMAEMDGIATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKALAHTHSIDAETPAVTASQFGMVGKSPAMQHLLSEIALVAPSEATVLIHGDSGTGKELVARAIHASSARSEKPLVTLNCAALNESLLESELFGHEKGAFTGADKRREGRFVEADGGTLFLDEIGDISPMMQVRLLRAIQEREVQRVGSNQIISVDVRLIAATHRDLAAEVNAGRFRQDLYYRLNVVAIEVPSLRQRREDIPLLAGHFLQRFAERNRKAVKGFTPQAMDLLIHYDWPGNIRELENAVERAVVLLTGEYISERELPLAIASTPIPLGQSQDIQPLVEVEKEVILAALEKTGGNKTEAARQLGITRKTLLAKLSR", - "output": "cytoplasm ; ATP binding ; DNA binding ; phosphorelay response regulator activity ; sequence-specific DNA binding ; DNA-templated transcription ; phosphorelay signal transduction system ; positive regulation of DNA-templated transcription initiation" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MANRRVGRGCWEVSPTERRPPAALRGPATEEEASSPPVLFLSHFCRSPFLCFGDVLLGDSRTLPLALDNPNEEVAEVKISHFPAADLGFSVSQRCFVLQPKEKIVISVNWTPFKEGRVREIMTFLVNDVLKHQAILLGNAEKQKKKKRSLWDTIKKKKISASTSHNRRVSNIQNVNKTFSVSQKVDRVRSPLQACENLAMNEGGPPTENNSLTLEENKIPISPISPAFNECHGATCLPLSVRRSTTYSSLHASENRELLNVDSANVSKVSFNEKAVTETSFNSINVNDQSGENSKLILTPNYSSTLNITQSQINFLSPDSFVNNSHGANNELELVTCLSSDMFMTDNSKPVHLQSTTAHEIYQKILSPDSFIKDNYGLNQDLESESVNPILSPNQFLKDNMAYMCTSQQTYKVPLSNENSQVPQSPQDWSKSEVSPCIPEYQGSKSPKAIFEELVEMKSNYYSFIKQNNPKFSAVQDISSHSHDKQPKRRPILSATVTKRKPTCTRENQTEINKPKAKRCLNSAVGEHEKVIHNQKEKEDFHSYLPVIDPVLSKSKSYKNQIMPSLTTASVARKRKSDGSMEDANVRVAVTEHTEEREIKRIHFSPSEPKTSAVKKTKNVITPISKCISNREKLNLKKKTDLLIFKTPISKTSKRTKPIIAVAQSNLTFIKPLKTDIPRHPMPFAAKNMFYDERWKEKQEQGFTWWLNFILTPDDFTVKTNISEVNAATLLLGVENQHKISVPRAPTKEEMSLRAYTARCRLNRLRRAACRLFTSEKMVKAIKKLEIEIEARRLIVRKDRHLWKDVGERQKVLNWLLSYNPLWLRIGLETIYGELISLEDNSDVTGLAMFILNRLLWNPDIAAEYRHPTVPHLYRDGHEGALSKFTLKKLLLLICFLDYAKISKLIDHDPCLFCKDAEFKASKEILLAFSRDFLSGEGDLSRHLGLLGLPVNHVQTPFDEFDFAITNLAVDLQCGVRLVRTMELLTQNWNLSKKLRIPAISRLQKMHNVDIVLQVLKSRGIELSDEHGNTILSKDIVDRHREKTLRLLWKIAFAFQVDISLNLDQLKEEIAFLKHTKSIKKTISLLSCHSDALINKKKGKRDSGSFEQYSENIKLLMDWVNAVCAFYNKKVENFTVSFSDGRVLCYLIHHYHPCYVPFDAICQRTTQTVECTQTGSVVLNSSSESDDSSLDMSLKAFDHENTSELYKELLENEKKNFQLIRSAVRDLGGIPAMINHSDMSNTIPDEKVVITYLSFLCARLLDLRKEIRAARLIQTTWRKYKLKTDLKRHQERDKAARIIQSAVINFLAKQRLRKRVNAALIIQKYWRRVLAQRKLLILKKEKLEKVQNKAASLIQGYWRRYSTRKRFLKLKYYSIILQSRIRMIIAVTSYKRYLWATVTIQRHWRAYLRRKQDQQRYEMLKSSSLIIQSMFRKWKRRKMQSQVKATVILQRAFREWHLRKRAKEENSAIVIQSWYRMHKELRKYIYIRSCVIVIQKRFRCFQAQKLYKRKKESILTIQKYYKAYLKGKIERTNYLQKRAAAIQLQAAFRRLKAHNLCRQIRAACVIQSYWRMRQDRVRFLNLKKTIIKLQAHIRKHQQLQKYKKMKKAAVIIQTHFRAYIFTRKVLASYQKTRSAVIVLQSAYRGMQARKVYIHILTSVIKIQSYYRAYVSKKEFLSLKNTTIKLQSIVKMKQTRKQYLHLRAAALFIQQCYRSKKITTQKREEYMQMRESCIKLQAFVRGYLVRKQMRLQRKAVISLQSYFRMRKARQYYLKMCKAIMVIQNYYHAYKAQVNQRKNFLRVKKAATCLQAAYRGYKVRQLIKQQSIAALKIQSAFRGYNKRVKYQSVLQSIIKIQRWYRAYKTLHDTRTHFLKTKAAVVSLQSAYRGWKVRKQIRREHQAALKIQSAFRMAKAQKQFRLFKTAALVIQQNFRAWTAGRKQRMEYIELRHAVLILQSMWKGKTLRRQLQRQHKCAIIIQSYYRMHVQQKKWKIMKKAALLIQKYYKAYSIGREQHHLYLKTKAAVVTLQSAYRGMKVRKRIKDCNKAAVTIQSKYRAYKTKKKYATYRASAIIIQRWYRGIKITHRQHQEYLNLKKTAIKIQSVYRGIRVRRHIQHMHRAATFIKAMFKMHQSRISYHTMRKAAIVIQVRFRAYYQGKMHREKYLTILKAVKILQASFRGVRVRWTLRKMQIAATLIQSNYRRYKQQTYFNKLKKITKTIQQRYRAVKERNIQFKRYNKLRHSVIYIQAIFRGKKARRHLKMMHVAATLIQRRFRTLMMRRRFLSLKKTAVWIQRKYRAHLCTKHHLQFLQVQNAVIKIQSSYRRWMIRKKMREMHRAATFIQATFRMHRVHMRYQALKQASVVIQQQYRANRAAKLQRQHYLRQRRSAVILQAAFRGVKTRRHLKSMHSSATLIQSRFRSLLVRRRFISLKKATIFVQRKYRATICAKHKLHQFLQLRKAAITIQSSYCTIRRLMVKKKLQEMQRAAVLIQATFRMHRTCVTFQTWKQASILIQQHYRTYRAAKLQKENYIRQWHSAVVIQTAYKGMKARQHLREKHKAAIIIQSTYRMYRQYCFYQKLQWATKIIQEKYRANKKKQKALQHNELKKETCVQASFQDMNIQKQIQEQHQAAIIIQKHCKAFKIRKHYLHLRATVVSIQRRYRKLTAVRTQAVICIQSYYRGFKVRRDIQNMHRAATLIQSFYRMHRAKVDYQTKKTAIVVIQNYYRLYVRVKTERKSFLPVQKSVRTIQAAFRGMKVRQKLKIVSEEKMAAIVNQSALCCYRSKTQYEAVQSEGVMIQEWYKASDLACSQEAECHSQSRAAVTIQNAFRRMVTRKLETQKCAALRIQFFLQMAVYRRRFVQQKRAAITLQHYFRTWQTRKQFLLYRKAAVVLQNHYRAFLSAKHQRQVYLQIRSSVIIIQARSKGFIQKRKFQEIKNSTIKIQAMWRRYRAKKYLCKVKAACKIQAWYRCWRAHKEYLAILKAVKIIQGCFYTKLERTWFLNVRASAIIIQRKWRAILSAKIAHEHFLMIKRHRAACLIQAHYRGYKERQVFLRQKSAALIIQKYIRAREAGKRERIKYIEFKKSTVILQALVRGWLVRKRILEQKTKIRLLHFTAAAYYHLNALRIQRAYKLYLAVKNANKQVNSVICIQRWFRARLQQKKFIQKYSIKKIEHEGQECLSQQNRAASVIQKAVRHFVLRKKQEKFTSGIIKIQALWRGYSWRKKNDCTKIKAIRLSLQVVNREIREENKLYKRTALALHYLLTYKHLSAILEALKHLEVVTRLSPLCCENMAQSGAISKIFVLIRSCNRSVPCMEVIRYAVQVLLNVSKYEKTTSAVYDVENCIDTLLELLQIYREKPGNKVADKGGSIFTKTCCLLAVLLKTTNRASDVRSRSKVVDRIYSLYKLTAHKHKMNTERILHKQKKNSSISIPFIPETPVRTRIVSRLKPDWVLRRDNMEEITNPLQAIQMVMDTLGIPY", - "output": "cytoplasm ; nucleus ; spindle ; calmodulin binding ; cell cycle ; cell division ; cytoskeleton organization" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MIAKTTNLNLFYGKKQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRKNVGMVFQQPNVFVKSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEVKDKLKQNALALSGGQQQRLCIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGELIEFGESKEFFENPKQEKTKAYLSGAFG", - "output": "plasma membrane ; ATP binding ; ATP hydrolysis activity ; ATPase-coupled phosphate ion transmembrane transporter activity ; inorganic phosphate transmembrane transporter activity" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MVNEEMESSLKVIDVARVTPSNSDSSESLTLPLTFFDLLWYKLHAVERVIFYKLTDASRPFFDSVIVPNLKTSLSSSLSHYLPLAGKLVWEPLDPKPKIVYTPNDAVSFTVAESNADFSRLTGKEPFPTTELYPLVPELHVSDDSASAVSFQVTLFPNQGFCISVNAHHAVLDGKTTTNFLKSWARTCKNQDSFLPQDLIPVYDRTVIKDPMDLDTKILNAWHRVAKVFTGGKEPENPKSLKLLWSPEIGPDVFRYTLNLTREDIQKLRERLKKESSSSSVSSSPKELRLSTFVIVYSYALTCLIKARGGDPSRPVGYGFAVDCRSLMVPPVPSSYFGNCVSACFKMSLTAETFMSEEGFLAAARMVSDSVEALDENVALKIPEILEGFTTLSPGTQVLSVAGSTRFGVYGLDFGWGRPEKVVVVSIDQGEAISFAESRDGSGGVELGFSLKKHEMDVLVDLLHKGLEN", - "output": "flavonol-3-O-beta-glucoside O-malonyltransferase activity ; O-malonyltransferase activity ; response to toxic substance" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MLILPIVKGEYKKDYNLKHLTWFKVGGNAEIFFKPLDSEDLKSFLIQNKQKLPIKTFGAGSNIIIRDGGIEGVVIKLGQNFSNIEFIDNHLIVGSSCLNYNLAKFCQANAISGFEFLVGIPGTIGGGVAMNAGAYGSEFKDIVVQIEAIDFAGNFLTFTNEEIGFKYRSNNLPKNLIILKVIFKINKGDSENILLRMNEINNARSSTQPIKERTGGSTFANPEGCKSWELIDKAGLRGYRIGGASMSELHCNFMINNGDATAKDLEDLGNFVQQKVCEDSGVKLEWEIKRIGRHP", - "output": "cytoplasm ; FAD binding ; UDP-N-acetylmuramate dehydrogenase activity ; cell cycle ; cell division ; cell wall organization ; peptidoglycan biosynthetic process ; regulation of cell shape" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MKLQLIAVGTRMPDWVTRGFEEYQRRFPRDMALELIEIPAGKRGKNADIVRILQKEGEQMLAAIPKGNHIVTLDLPGKNWTTPELATAMNKWQLDGRDVSLLVGGPEGLAPACKEAAHQSWCLSALTLPHPLVRIVVAESLYRAWSVNTNHPYHRE", - "output": "cytoplasm ; rRNA (pseudouridine-N3-)-methyltransferase activity" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MTHDNKLQVEAIKRGTVIDHIPAQIGFKLLSLFKLTETDQRITIGLNLPSGEMGRKDLIKIENTFLSEDQVDQLALYAPQATVNRIDNYEVVGKSRPSLPERIDNVLVCPNSNCISHAEPVSSSFAVRKRANDIALKCKYCEKEFSHNVVLAN", - "output": "aspartate carbamoyltransferase complex ; metal ion binding ; 'de novo' pyrimidine nucleobase biosynthetic process ; pyrimidine nucleotide biosynthetic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MTTPPLAQFSGQQQQQTQAARDVNTASLCRIGQETVQDIVLRTMEIFQLLRNMQLPNGVTYHPNTHQDRLGKLQEHLRTLSVLFRKLRLVYDKCNENCAGLEPIPSEQLIPYVEDDSSKLEDRMANQLRAASEERREVLEVNKKLKQKNQQLKMIMDQLRNLIWEINSMLAVRS", - "output": "mediator complex ; transcription coregulator activity ; positive regulation of DNA-templated transcription" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MFPIASRRILLNASVLPLRLCNRNFTTTRISYNVIQDLYLRELKDTKLAPSTLQDAEGNVKPWNPPQKPNLPELELQGPEALKAYTEQNVETAHVAKESEEGESEPIEEDWLVLDDAEETKESH", - "output": "mitochondrial inner membrane ; mitochondrial proton-transporting ATP synthase complex ; mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) ; mitochondrion ; cristae formation ; mitochondrial proton-transporting ATP synthase complex assembly ; proton motive force-driven ATP synthesis ; proton transmembrane transport" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MILPSEKSATDVAAQCFLNALIRETKDWQLAEYPPDELIIPLDEQKSLHFRVAYFSPTQHHRFAFPAHLVTASGSYPVDFTTLSRLIIDKLRHQLFLPVPLCETFHQRVLESYAHTQQTIDARHDWAILREKALNFGEAEQALLTGHAFHPAPKSHEPFNRQEAERYLPDMAPHFPLRWFSVDKTQIAGESLHLNLQQRLTRFAAENAPQLLNELSDNQWLFPLRPWQGEYLFQQVWCQALFAKGLIRDLGEAGTSWLPTTSSRSLYCATSRDMIKFSLSVRLTNSVRTLSVKEVERGMRLARLAQTDGWQMLQARFPTFRVMQEDDWTGLRDLNGNIMQESLFSPAWKTLLLEQPQSQTNVLVSLTQAGPHGGDSLLVSAVKRLSDRLGITVQQAAHAWVDAYCQQVLKPLFTAEADYGLVLLAHQQNILVQMLGDLPVGFIYRDCQGSAFMPHATEWLDTIDEAQAENIFTREQLLRYFPYYLLVNSTFAVTAALGAAGLDSEANLMARVRTLLAEVRDQVTHKTCLNYVLESPYWNVKGNFFCYLNDHNENTIVDPSVIYFDFANPLQAQEV", - "output": "aerobactin synthase activity ; ATP binding ; transferase activity ; aerobactin biosynthetic process ; extracellular sequestering of iron ion ; siderophore biosynthetic process" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "FIGPIISALASLFG", - "output": "extracellular region ; defense response to bacterium" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MDLKFATFSSEIELPFYSALFSSKLDHDKLDSSARPVLGLYEPRSQANPEASTRMQILGSALTSDQDESGPLGMTRAEGYIKNVNTIEEFKNTDKNAMIKKAGEQIWDAIQDGTIYSCPSLLASFRILSYADLKKYRFTYWFAFPALHSEPQWKRTEPIGRLNSDESTALVERIGTWRYMVDRREHGFFLAKKVRGEASGPRSSLDDPGVDIGYRWDIGSLRDFETGFFNDAAEEDRYVAFVDPSNYPEYPSWPLRNLLILVRQRYRLNKVQILCYRDTQPRRHEARSIILPLAMDQVGDVELKSMPKVTGWERNGNGDLRPRVANLAEYMDPTRLADQAVDLNLKLMKWRLAPNLDLDTIKNTKCLLLGAGTLGSYVSRNLLGWGVRKITFIDYGSVSFSNPVRQPLFKFEDCHNGGKPKAIQAAEALREIYPGVDVEGYALSVPMLDHPIHNEAKTKAEFDKLKELIDSHDAIFLLMDTRESRWLPTLMGKAANKIVMNAALGFDTYVVMRHGAKPLDDSEDTLGCYFCNDVVVAADSMKDQTLDQQCTVTRPGVAAIASALLVELLTSILQHPLKQHAPAPISAGTGSAVSYERDPHDHPLGLVPHQVRGFLSNFQNMIIRGKSYPQCSACSKPVLDAYREGGWDFVKTALASRDYVAELSGLAEVQRLAEKAAAEMQWSEDEEGMGEEEGEGELI", - "output": "phagophore assembly site ; ubiquitin-like modifier activating enzyme activity ; autophagy ; protein transport" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MEQCVADCLNSDDCVMIVWSGEVQEDVMRGLQVAVSTYVKKLQFENLEKFVDSSAVDSQLHECSVILCGWPNSISVNILKLGLLSNLLSCLRPGGRFFGRDLITGDWDSLKKNLTLSGYINPYQLSCENHLIFSASVPSNYTQGSSVKLPWANSDVEAAWENVDNSSDANGNIINTNTLLQKSDLKTPLSVCGKEAATDSVGKKKRACKNCTCGLAEIEAAEEDKSDVPISSCGNCYLGDAFRCSTCPYRGLPPFKPGERILIPDDVLRADL", - "output": "mitochondrial intermembrane space ; 2 iron, 2 sulfur cluster binding ; 4 iron, 4 sulfur cluster binding ; electron transfer activity ; metal ion binding ; iron-sulfur cluster assembly" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MIMTQEKKKFDAEVGKILNLMIHSLYSNKEIFMRELISNASDACDKLRYLSQSNSELVAGDSNFKITVKVDKDNGQIIIRDNGIGMNKDDLIENLGTIARSGTANFLKSLSGDSKKDNMLIGQFGVGFYSSFMVADKVTVTSRKAGEDKVHIWESDGLGEYTVSDSDKEFTRGTEIVLHIKKEEDTFLDHFRLKHIVKSYSDHIAVPIYFFDEAGNNEIQLNSASALWTRPKSEITEEQYKEFYKSLSYAVDDPWITMHNKNEGAIEFTNLLFIPSSKTFDLFHPDRKRRVKLYIKRVFISDENIDLIPSYLRFLRGVVDSEDLPLNISRESLQHNSVLEKIKNAITKRVLGELRKKKEESPEEYNKFWANFGGALKEGLCEATTDHEKLLEVCIFRSALHNKMISLDEYIANFKEGQSTIYYLSGDNPDKLLSSPQIEGLLSKEIDVLLFTDTVDDFWVNVNSKYKEHAIKSATRSDIDVEQTTSQSEEKNTDSKKSDDEYKLLTDYFKETLGELVKEVKISKKLTSSPACLAVSDAAMDIRMERFLIEQKQIANASAKNLELNPKNKIIEKIFNDLKANNKNNEELVNLIFDQACILEGEPVADTGAFSKRLNDIVQKAIL", - "output": "cytoplasm ; ATP binding ; ATP hydrolysis activity ; ATP-dependent protein folding chaperone ; unfolded protein binding" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MASSISHRKTRDEYKKEKELDEARKAGNAPAELDEEGKEINPHIPEYILKAPWYLNANKPSLKHQRGVTKKEMDKGWYLRGATTGEAATKFRKGACENCGAMTHKTKDCCERPRKLGAKFTNDDIKPDEVIQKLELDYDSKRDPYNGYDPSSYKEVMDIYEKADTERKKKKLQELIKQHGGGGDKKTPDVDETLSKELMDNEEKEGSYDSETVAPIQKLDQKSRTTIRNLRIREDTAKYLYNLDVNSAFYEPKSRSMRDNPLPNANPNDIKFAGDNFARTSGETKEFRDLQRFAWEAQEKGQDVDISSAPSQAALLHADFLRKKEQLKQQTRNQLLTKYGGEEHLLKQEEIDKVPQSEIYTEYSSSGKLIKGEEKIVKSKYEEDVFLNNHKSIWGSYWENGQWGFACCRQLIKNAYCTGEKGKLLREKQLQQQQQHHIQQENQQDDDDNNTTTTTTTTTTSLLEQHLNKSNEDNDKHNKKEGKRKDKKERKEKEEKLKKALKDQDEENKKSVEKDERNIKYNSLSADDYNVSEEQMEAYNLKRKRSDDPMANFKDDSD", - "output": "spliceosomal complex ; metal ion binding ; pre-mRNA 3'-splice site binding ; mRNA splicing, via spliceosome ; RNA splicing ; RNA splicing, via transesterification reactions" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MSIIQEFKEFAIKGNMMDLAIGVIIGGAFGKIVDSLVKDIIMPLITVITGGGVDFSQKFIVLGANPNNLQSLDALQKAGINVLTYGNFLTILINFLILAWVVFLMVKLLNKLRRDKNEPEAPAATPEDIQLLREIRDELKKQA", - "output": "plasma membrane ; mechanosensitive monoatomic ion channel activity" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MSGKSPAQTRVVVGMSGGVDSSVTALLLKEQGYDVIGVFMKNWDDTDENGVCTATEDYKDVAAVADQIGVPYYSVNFEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFLDYAMELGADYVATGHYAQVRTDENGIVHMLRGADNNKDQTYFLSQLTQEQLKKTMFPLGHLEKPEVRKIAEKAGLATAKKKDSTGICFIGEKNFKKFLGEYLPAQPGKMMTLDGIEMGNHAGLMYYTIGQRGGLGIGGQHGQLTSDPWFVVGKDLTTNTLYVGQGFHHEHLYSTSLDASDLSFTREMPETFDLHCTAKFRYRQEDTGVTIHVNGDKVTVDFDEPVRAITPGQAVVFYDGEECLGGAMIDVAYKAQKVMQYQ", - "output": "cytoplasm ; ATP binding ; sulfurtransferase activity ; tRNA binding ; tRNA modification" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MAKAKFERSKPHVNVGTIGHVDHGKTTLTAAISHVLAKTYGGEAKDFSQIDNAPEERERGITINTSHIEYDTPSRHYAHVDCPGHADYVKNMITGAAQMDGAILVVASTDGPMPQTREHILLSRQVGVPFIIVFMNKCDMVDDAELLELVEMEVRELLSEYDFPGDDLPVIQGSALKALEGEPEWEAKILELAAALDSYIPEPERDIDKPFLMPIEDVFSISGRGTVVTGRVERGIVRVGDEVEIVGIRTTTKTTCTGVEMFRKLLDEGRAGENCGILLRGTKRDDVERGQVLSKPGSINPHTTFESEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEMVMPGDNIKMKVTLICPIAMDEGLRFAIREGGRTVGAGVVAKIFA", - "output": "cytoplasm ; GTP binding ; GTPase activity ; guanosine tetraphosphate binding ; translation elongation factor activity ; translational elongation" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MKNPMLEAVSLVLEKLLFISYFKFFSSGAPGQDKAGNTLYEISSFLRGDVLEVPRTHLTHYGIYLGDNRVAHMMPDILLALTDDKGRTQKVVSNKRLILGVIGRVASIRVDTVEDFAYGAEILVNHLDRSLKKKALLNEEVAQRAEKLLGITPYSLLWNNCEHFVTYCRYGTPISPQADKFCENVKIIIRDQRSVLASAVLGLASIFCLGLTSYTTLPAIFIPFLLWMAG", - "output": "endoplasmic reticulum ; endoplasmic reticulum membrane ; multivesicular body ; perinuclear region of cytoplasm ; rough endoplasmic reticulum ; lecithin:11-cis retinol acyltransferase activity ; phosphatidylcholine-retinol O-acyltransferase activity ; response to stimulus ; retinol metabolic process ; visual perception ; vitamin A metabolic process" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MTNALLEDLKWRGLIYQQTDESGIENILNKEQVTLYCGADPTADSLHIGHLLPFLTLRRFQEHGHRPLVLIGGGTGMIGDPSGKSEERTLQTEAQVETNVQGINKQMHKIFEFDTEKGAKLVNNKDWLGQISLIDFLRDYGKHVGVNYMLGKDSIQTRLEHGISYTEFTYTILQAIDFGHLNRTYNCKVQVGGSDQWGNITSGIELMRRMYGQTEAYGLTIPLVVKSDGKKFGKTEGGAVWLDAAKTSPYEFYQFWINTTDDDVIKFLKYFTFLEQEEIEALEKSLNEAPHLREAQKALAENVTRFIHGQDALDDAIRISQALFAGDLQSLSASELKEGFKDVPQVELSSETRNIVEVIVETGISSSKRQAREDVNNGAIYINGIRQQDVNYELTSEDKIENEFTIIRRGKKKYFMVNYK", - "output": "cytoplasm ; ATP binding ; RNA binding ; tyrosine-tRNA ligase activity ; tyrosyl-tRNA aminoacylation" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MVGYDPKPDGRNNTKLQVAVAGSVSGLVTRALISPFDVIKIRFQLQHERLSRRDPNAKYHGIFQASRQILQEEGLTAFWKGHIPAQILSIGYGAVQFLSFEMLTELVHRGSVYDAREFSVHFVCGGLAACTATLTVHPVDVLRTRFAAQGEPKVYNTLRHAVGTMYRSEGPQVFYKGLAPTLIAIFPYAGLQFSCYSSLKHLYKWAMPAEGKKNENLQNLLCGSGAGVISKTLTYPLDLFKKRLQVGGFEHARAAFGQVRRYKGLMDCAKQVLQKEGALGFFKGLSPSLLKAALSTGFMFFWYEFFCNVFHCMNRTASQR", - "output": "mitochondrial membrane ; mitochondrion ; antiporter activity ; thiamine pyrophosphate transmembrane transporter activity ; thiamine pyrophosphate transmembrane transport" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MSRMVQCVKLGHEAEGLDRPPYPGALGARIYQEVSKEAWQGWLKHQTMLINEYRLSPIDPKSRTFLEKQMEAYFFGDGAQSPEGYVPPAPQDS", - "output": "iron ion binding" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MNDIAHNLAQVRDKISAAATRCGRSPEEITLLAVSKTKPASAIAEAIDAGQRQFGENYVQEGVDKIRHFQELGVTGLEWHFIGPLQSNKSRLVAEHFDWCHTIDRLRIATRLNDQRPAELPPLNVLIQINISDENSKSGIQLAELDELAAAVAELPRLRLRGLMAIPAPESEYVRQFEVARQMAVAFAGLKTRYPHIDTLSLGMSDDMEAAIAAGSTMVRIGTAIFGARDYSKK", - "output": "pyridoxal phosphate binding" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MAREFSLEKTRNIGIMAHIDAGKTTTTERILYYTGRIHKIGETHEGASQMDWMEQEQDRGITITSAATTAAWEGHRVNIIDTPGHVDFTVEVERSLRVLDGAVTVLDAQSGVEPQTETVWRQATTYGVPRIVFVNKMDKLGANFEYSVSTLHDRLQANAAPIQLPIGAEDEFEAIIDLVEMKCFKYTNDLGTEIEEIEIPEDHLDRAEEARASLIEAVAETSDELMEKYLGDEEISVSELKEAIRQATTNVEFYPVLCGTAFKNKGVQLMLDAVIDYLPSPLDVKPIIGHRASNPEEEVIAKADDSAEFAALAFKVMTDPYVGKLTFFRVYSGTMTSGSYVKNSTKGKRERVGRLLQMHANSRQEIDTVYSGDIAAAVGLKDTGTGDTLCGEKNDIILESMEFPEPVIHLSVEPKSKADQDKMTQALVKLQEEDPTFHAHTDEETGQVIIGGMGELHLDILVDRMKKEFNVECNVGAPMVSYRETFKSSAQVQGKFSRQSGGRGQYGDVHIEFTPNETGAGFEFENAIVGGVVPREYIPSVEAGLKDAMENGVLAGYPLIDVKAKLYDGSYHDVDSSEMAFKIAASLALKEAAKKCDPVILEPMMKVTIEMPEEYMGDIMGDVTSRRGRVDGMEPRGNAQVVNAYVPLSEMFGYATSLRSNTQGRGTYTMYFDHYAEVPKSIAEDIIKKNKGE", - "output": "cytosol ; GTP binding ; GTPase activity ; translation elongation factor activity ; ribosome disassembly" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MVKRVAIVGAGVSGLASIKCCLEEGLEPTCFERSCDLGGLWRFTEHVEEGRASLYNSVVSNSSKEMSCYSDFPFPEDYPNFVPNSLFLEYLQLYATQFNLLRCIYFNTKVCSITKRPDFAVSGQWEVVTVCQGKQSSDTFDAVMVCTGFLTNPHLPLDSFPGIQTFKGQYFHSRQYKHPDVFKDKRVLVVGMGNSGTDIAVEASHLAKKVFLSTTGGAWVISRVFDSGYPWDMIFMTRFQNMLRNLLPTPVVSWLISKKMNSWFNHVNYGVAPEDRTQLREPVLNDELPGRIITGKVLIKPSIKEVKENSVVFNNTPKEEPIDVIVFATGYSFAFPFLDESIVKVEDGQASLYKYIFPAHLPKPTLAVIGLIKPLGSMIPTGETQARWVVQVLKGATTLPPPSVMMKEVNERKKNKHSGFGLCYCKALQSDYITYIDDLLTSINAKPDLRAMLLTDPRLALSIFFGPCTPYHFRLTGPGKWEGARKAILTQWDRTVNVTKTRTVQETPSTFETLLKLFSFLALLVAVFFIFL", - "output": "endoplasmic reticulum membrane ; intracellular membrane-bounded organelle ; flavin adenine dinucleotide binding ; hypotaurine dehydrogenase activity ; monooxygenase activity ; N,N-dimethylaniline monooxygenase activity ; NADP binding ; trimethylamine monooxygenase activity ; energy homeostasis ; NADPH oxidation ; negative regulation of fatty acid oxidation ; organic acid metabolic process ; response to lipopolysaccharide ; response to osmotic stress ; taurine biosynthetic process ; toxin metabolic process ; xenobiotic metabolic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MLTLGLESSCDETSCSLVQNGKILANKIASQDIHASYGGVIPELASRAHLQTFPELLTAATQSAGVSLEDIELISVANTPGLIGALSIGVNFAKGLASGLKRPLIGVNHVEAHLYAACMEAPATQFPALGLAISGAHTSLFLMPDATTFLLIGKTRDDAIGETFDKVARFLGLPYPGGQKLEELAREGDADAFAFSPARVSGYDFSFSGLKTAVLYALKGNNSSAKAPFPEVSETQKRNIAASFQKAVFMTIAQKLPDIVKAFSCESLIVGGGVANNSYFRRLLNQICSLPIYFPSSQLCSDNAAMIAGLGERLFCNRTHVSKEVIPCARYQWESACS", - "output": "cytoplasm ; iron ion binding ; N(6)-L-threonylcarbamoyladenine synthase activity ; tRNA threonylcarbamoyladenosine modification" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MKTFTAKPETVKRDWFVVDAAGQTLGRLATEIASRLRGKHKPEYTPHVDTGDYIVVINAEQIRVTGAKTTDKIYYSHSGFPGGIKSINFEKLIAKAPERVIETAVKGMLPKNPLGRDMYRKLKVYAGAVHPHTAQQPQELKF", - "output": "ribonucleoprotein complex ; ribosome ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MAKEEAIEVEGKVVEPLPNAMFRVKLDNGHTILAHISGKMRKFYIRILPGDRVTVELSPYDLTRGRITYREK", - "output": "cytoplasm ; ribosome binding ; rRNA binding ; translation initiation factor activity" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MIRAAIKGSGSALPRKVVTNEELAARVDTSDEWIVERTGIRQRYIAGADEFTSTLAMEASRKALEAAGITPETIDLIVLATATPDNTFPATATKVQEALGCNGCIAFDVQAVCSGFLYALATADSLLKTGMAKRALVIGAETFSRILDWEDRTTCVLFGDGAGAVVLEAAEGDTEAPGILASRLHADGAQHDLLYVDGGPSTTQTVGHLRMRGREVFRHAVVNLADVLKEVLDDAGVSASDIDWVVPHQANARILDATARKLGLPMEKIVVTVDRHANTSAASVPLAFDTAVRDGRIKPGDLVMFEAMGGGFTWGASLVRY", - "output": "cytoplasm ; 3-oxoacyl- synthase activity ; beta-ketoacyl-acyl-carrier-protein synthase III activity ; fatty acid biosynthetic process" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MNGQHSSPGTPVQRPSAGPVNQAQFSQQRTNQLTSLLHTMTMYQQLAQNVGLNTPQGQVYLLQAQTIRRQLQGHAQSGQLPNQQLLQQLQSNGALQQGTPEPSNTRPRPQLNAQEQTMLLVRHRQLQTAQNYLTEMKEALGRIKNELSTNERLDTSAREALVKQESELTVKIAQFTAAISNGIRSIQQLQNRQASSANGNNTGTSTPVNASTDTRKSTASTPQLQQTQAQANAPQQRINPETSSVPETPVGVSAANVSNESTELATSATQQSGLANNVEKSQTPSYMSANHLPKVDSKSPIPFSVPPSRATLTGGYASGSIGLSTPGLSRAPHYELDNGNRLLSKRKLHDLLQQIDSEEKIEPEVEELLLEIADEFVESVTNFACRLAKHRKSDTLDVRDVQLHLERNWNIRLPGFASDDIVKSARKTGPTPSYQQKQNAIGTAKSLNKD", - "output": "nucleus ; SAGA complex ; transcription factor TFIID complex ; DNA binding ; protein heterodimerization activity ; RNA polymerase II general transcription initiation factor activity ; TBP-class protein binding ; positive regulation of DNA-templated transcription ; RNA polymerase II preinitiation complex assembly ; transcription initiation-coupled chromatin remodeling" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MEVATDQPRWMTHHAVLNGQHPESHHPGLAHNYMEPAQLLPPDEVDVFFNHLDSQGNPYYANSAHARARVSYSQAHARLTGSQMCRPHLIHSPGIPWLDSSKAALSAHHHNPWTVNPFTKTPLHPSAAGAPGAISVYPGSSTSSTASVSSLTPASHSGSHLFGFPPTPPKEVSPDPNSTSAASPSSSAGARQEDKDSIKYQVSLSEGMKMESASPLRSSLTSMGAQPSTHHPIPTYPSYVPAAHDYSSSLFHPGSFLGGPASSFTPKPRSKARSCSEGRECVNCGATATPLWRRDGTGHYLCNACGLYHKMNGQNRPLIKPKRRLSAARRAGTCCANCQTTTTTLWRRNANGDPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKMSNKSKKSKKGSECFEELSKCMQEKSSPFSAAALASHMAPMGHLPPFSHSGHILPTPTPIHPSSSISFGHPHPSSMVTAMG", - "output": "nucleus ; DNA-binding transcription factor activity, RNA polymerase II-specific ; RNA polymerase II cis-regulatory region sequence-specific DNA binding ; transcription coactivator binding ; zinc ion binding ; cell fate commitment ; negative regulation of transcription by RNA polymerase II ; positive regulation of angiogenesis ; positive regulation of miRNA transcription ; positive regulation of transcription by RNA polymerase II" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MNPLSALFGAGVATRNAMFDRSLLKQQRLRGPVVSVGNLCVGGTGKTPFTQLLGDLLMQREIDFDVLSRGYGRESTEIKIVELDGSPNEFGDEPLLLAKYFAAKKPENPPRVIVGADRYEAGRFAEQKFGPRLHLLDDGFQHRGLARDFDIVLLAPDDADQVLLPVGRLREPLTALKRAHAVVATDEVKIEAFPVMPPLVWRVERDIALPEQLSRNARVLAFCAIARPHRFFTDLRRHGLEPVAELTFRDHHRYSAADIEKIVREISSSRADCCVTTIKDMMNLGELVHRLAPIYAVRLSLKLRDADAALDEIIKIIERRQG", - "output": "ATP binding ; tetraacyldisaccharide 4'-kinase activity ; lipid A biosynthetic process ; phosphorylation" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MTQTQPVGTLRLTIDDQGPQGQSRAVEQFHQGALRVIRPHYLDDSGQVCYTIIAIGGGYLGGDVYEQQFTIKDNAKALITTQSATKIYRTPQGPATQHTEINVGENAVLEYLADQTIAYREATYHQFTKVALHPSATFVMSEQITPGWHPDGKHFAYDEMRLHTEITDSTTGRLVLLDNLLLRPDSREGSFGWTEQYTHSGQMIVMGEGVDKQLVAELNEQLAAHPDVYGAVNFLSAPGTLLRGFIARTLSNRTEELINLHEHIASLLRGRWRGQEPVNLRKY", - "output": "cytoplasm ; nickel cation binding ; nitrogen compound metabolic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MFMKKSSIIVFFLTYGLFYVSSVLFPIDRTWYDALEKPSWTPPGMTIGMIWAVLFGLIALSVAIIYNNYGFKPKTFWFLFLLNYIFNQAFSYFQFSQKNLFLATVDCLLVAITTLLLIMFSSNLSKVSAWLLIPYFLWSAFATYLSWTIYSIN", - "output": "membrane ; plasma membrane ; identical protein binding ; tetrapyrrole binding ; tetrapyrrole metabolic process" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MTTIDMNQDLGKHIHLIGIGGISMSAIAEILLNQGYRVSGSDMNDSNIINKLRAHGAEIFIGHNEDNVKDPDLVVYTAAIKEHNPERMAAKERNIPQIDRAEMLGIIMKNYKKAIAVSGSHGKTTTTSLISLIMEYSNLDPTIMVGGELDEIGGNIKIGNSEHFITEACEYVESFLKFYPFIGIILNIDEDHLDYFKDLNHIKEAFRKFINLIPQEGFLIANGDDANVQEILHSIECNLITYGLDSSNTFVARNISFTNDGYPIFTVDFKGESMGTFELNIPGKHNIYNALASIATAYLLGVEPSEIQNHIKKFRGIHRRFDILGEVKGCKIVDDYAHHPVEISATLEAAKNYPHNKIWCVFQPHTFSRTKALLEDFSRSFTNADHIIITDIYAAREQDTGEVHSEILANMIQKNNMHSQVRYMKDFEDIAAYIYDHMEPGDLVLTMGAGNVYQIGQKILQRHNE", - "output": "cytoplasm ; ATP binding ; UDP-N-acetylmuramate-L-alanine ligase activity ; cell cycle ; cell division ; cell wall organization ; peptidoglycan biosynthetic process ; regulation of cell shape" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MLMPKRVKHRKVQRGRMKGRATRGNFLAYGDFGLQATTCGWITSNQIEAARIAINRYIKRGGKLWIKIFPDKPVTEKPAETRMGSGKGSPEYWVAVVKPDRVVFELSGVTEDVAREAMRLASHKLPVRTKFVTRRDFEEMGGEK", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; tRNA binding ; translation" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MKPTIALIGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKVGSKPYFVIDTGGFEPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNKGEGGDRAVLAAEFYELALGEPHVISGAHGDGVYYLIEEILENFPEPEAEEADAKHPVFAVIGRPNVGKSTLVNAILGEKRVIAFDMAGTTRDSIHIDFEREGKPFTIIDTAGVRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVVAVNKWDGISEERREQVKRDISRKLYFLDFAKFHFISALKERGIDGLFESIQAAYNAAMIKMPTPKITRVLQTAVERQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYLTQTFRKAFNLQGTPLRIQYNVSENPYENAEDKPKKKPLRRVSLSNRIEKREGRKEEKNRFKKKTKVSVKKQFSK", - "output": "GTP binding ; ribosome biogenesis" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MRRGVLPTAPPAYNDIAYSMSILPTRPSVIVNETKSDVLAVPGADVPSNSMRPVADDNIDHSSHTPSGVASAFILEAKVNVISGTKVLMKQIPIWLPLGVADQKIYSFDSTTAAIMLASYTVTHFGKISNPLVRVNRLGPGIPDHPLRLLRLGNQAFLQEFVLPPVQLPQYFTFDLTALKLITQPLPAATWTDETPAGAVNALRPGLSLHPKLRPILLPGKIGKKGHASDLTSPDKIQTIMNAIPDLKIVPIDPIKNIVGIEVPELLVQRLTGKKPQPKNGQPIIPVLLPKYVGLDPISPGDLTMVITQDCDSCHSPASHPYHMDKQDSYQ", - "output": "host cell endomembrane system ; host cell late endosome membrane ; host cell plasma membrane ; membrane ; ribonucleoprotein complex ; virion membrane ; RNA binding ; structural constituent of virion ; viral budding via host ESCRT complex" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MKSVITTVISAADAAGRFPSNSDLESIQGNIQRSAARLEAAEKLAGNHEAVVKEAGDACFAKYAYLKNPGEAGENQEKINKCYRDVDHYMRLVNYDLVVGGTGPLDEWGIAGAREVYRTLNLPTSAYVASIAYTRDRLCVPRDMSAQAGVEFSAYLDYLINALS", - "output": "chloroplast thylakoid membrane ; phycobilisome ; photosynthesis" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MIRQCLSRRAACPCYRIAAGGTELTGCLYPQSSRISRRGRDWSSTSRRAIDTQTSGASNGADYVPLRKQLKEQAREGRAATRKGEVSPPEHEDWELTVGIEIHAQLDTDTKLFSRASAAIDDVPNSNVALFDIALPGSQPLFQPATLIPALRAAIALNCDVQRVSRFDRKHYFYQDQPAGYQITQYYEPYAKNGSIWLGPHDGIAKEDGVGVKIGIKQIQLEQDTAKSQELPSSTYLLDFNRVSRPLIEIITLPQIHSPATAAACVRKIQTILQSVGAVTTGMEMGGLRADVNVSVRKRSEGVGDHQYHGITGLGQRTEIKNLSSFKAVENAIIAERDRQIAVLRAGGAIEGETRGWTLGSTETRKLRGKEGEVDYRYMPDPDLGPVIIGIDVFFELKAKLPVLPDALLQSLVQDPKYGLSTDDAKALIELDDGDRLDYYKDAVDILITLQKDLSDDFSGGGKVVGNWVLHELGGLLTKSNLHWDSERVPAQSLAEIINLLSRNKITGSTAKSLLAMVFDGDKRSISQIVEDENLLLQSLSREEYIALAEEVMRQNPKMVMEICEKRQLGKIGWLVGQIKQIGDRNRVEAQKAEEILRELILK", - "output": "glutamyl-tRNA(Gln) amidotransferase complex ; mitochondrion ; ATP binding ; glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity ; glutaminyl-tRNAGln biosynthesis via transamidation ; mitochondrial translation" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MEADVIKLLAAGLAMGLGAIGPGIGVGILGFGALQAIGRNPEAKGSIFTNMILLVAFAESIAIFALVISIVLIFVA", - "output": "plasma membrane ; proton-transporting ATP synthase complex, coupling factor F(o) ; lipid binding ; proton-transporting ATP synthase activity, rotational mechanism" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MSCFCSVQEEFYCEVLLLDESKLILTTQQQGIKKSTRGSVVLDYVFSHVNLAETEYFGVRYCDRSHQTFWLDPSKTLAEHKDLIATGPPYTLYFGVKFYAEDPGKLKEEITRYQFFLQVKQDVLQGRLPCAFNISAQLAALAIQSELGDYDPYKHTAGYVSEYRFVPDQKEDLEDSIEQIHKTLLGQVPAEAENNYLAIAKTLEMYGVDLHPVFGEKQAEYFLGLTPVGVVVYKNKTQVGKYFWPRITKVYFKETQFELRVLGRDCNETSFFFDAASKTACKNLWKCCVEHHTFFRMPENESNSLTRKLSKFSSLGSKHRYSGKTAMQIGRESTETLPRADLQVIRTRSKTYPKRSTQPAGRNNGGQAVTKMENTSEGQPKTSALTPVKSPRVKAESASVQQEKPSAPWEEDAPQSGLYNSASERNKSPKFPKAHRRSPSGGSENEPRHRRGQTADDAQANKQHRRRSRSRGNTSSGSESENSNREHRKKRNRSRQSNEMVDSAPQWEVVLRRQKEKTPNDPNQRRSRHRSRSRSPDVQAKEQLWKHIQKELVDPSGLSEEQLKEIPYKKVETQGDPIKIRHSHSPRSFGSTGAPTARTERGLCCPKSTLALIWFLLWL", - "output": "cytoplasm ; cytoskeleton ; calmodulin binding ; actomyosin structure organization" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MGRSSKKGPYVDKKLLEKIRKLNETGEKKVIKTWSRASMIIPEMVGHTIAVYNGMKHIPVYITENMIGHRLGEFAPTRRFGGHADKKAKKGELKK", - "output": "cytoplasm ; small ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MPPKKKLVKTFTLQLPAGQATPAPPVGPALGQHGVNIMEFCKSYNAQTESQRGDIVPAEISVYEDRTFTFVLKTPPAARLLIKAAGVAKGSGVPHMEKVGQVSRAQLREIAEKKMADLNANDLDQAEKIIAGTARSMGLNVVD", - "output": "ribonucleoprotein complex ; ribosome ; large ribosomal subunit rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MLDNTRLRIAIQKSGRLSDDSRELLARCGIKINLHTQRLIAMAENMPIDILRVRDDDIPGLVMDGVVDLGIIGENVLEEELLNRRAQGEDPRYLTLRRLDFGGCRLSLATPVDEAWDGPAALDGKRIATSYPHLLKRYLDQKGVSFKSCLLNGSVEVAPRAGLADAICDLVSTGATLEANGLREVEVIYRSKACLIQRDGEMAQSKQQLIDKLLTRIQGVIQARESKYIMMHAPSERLEEVIALLPGAERPTILPLAGEQQRVAMHMVSSETLFWETMEKLKALGASSILVLPIEKMME", - "output": "cytoplasm ; ATP binding ; ATP phosphoribosyltransferase activity ; magnesium ion binding ; histidine biosynthetic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MTKKKAHKPGSATIALNKRARHEYFIEDEYEAGLALQGWEVKSLRAGKANIGDSYVILKDGEAFLFGANFTPMAVASTHYVCDPTRTRKLLLNQRELDTLYGRINREGYTVVALSLYWKNAWCKVKIGVAKGKKQHDKRTDLKDREWALDKARIMKHAGR", - "output": "cytoplasm ; RNA binding ; trans-translation" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MTVYHFVGIKGTGMSSLAQILHDMKHTVQGSDYEKRFFTQTALEKRNISILPFDKSNVKEGQVIIAGNAFPDTHEEIVAAKELNIPVHRYHHFLGDLMNQYTSVAVTGAHGKTSTTGLLAHVMQGAHPTSYLIGDGTGHGVENSKYFVFEACEYRRHFLSYNPDYAIMTNIDFDHPDYFTDINDVFSAFQEMALQVKKGIIACGDDEELQKIQAKVPVIFYGFGEDNDFQARNIQKRTDGTIFDVFVRNTYYDTFKITGYGNHSVLNALAVIALCHYENVDVEAVKHQLTTFEGVKRRFNEKPMGEQVIIDDYAHHPTEINATIEAARQKHPEREIVAVFQPHTFSRTEKFLDEFAESLSKADQVYLCDIFGSARENKGELTIEDLQKRIDGAELITDTTTDVLKKHKNGVLIFMGAGDIQKFEAAYVKEVQVAEK", - "output": "cytoplasm ; ATP binding ; UDP-N-acetylmuramate-L-alanine ligase activity ; cell cycle ; cell division ; cell wall organization ; peptidoglycan biosynthetic process ; regulation of cell shape" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MKYQVVIGLEVHTQLTTNTKIFCGCSTRFGAEPNSQTCPVCLGLPGALPVLNQQVVEYAIRAGLATNCSITKRNVFARKNYFYPDLPKGYQISQFDLPICQHGHLDIEVEGEKKRIGITRIHMEEDAGKLVHADIPGVDDSCVDLNRACTPLLEIVSEPDMRSPDEAIAYLKKLHQIVMYLGICDGNLEEGSFRCDANVSLMPVGSNVFGTRAELKNINSFKFIKQAIEYEIERQAEILDDGGKVVQETRLFDPNTGTTRSMRGKEEAHDYRYFPDPDLVPVIISDDWIEKVRGGLPELPEAKRARFMSEGGAVFGGSAFGLPEYDAEVLVASRELAQYFEDTVALFPQAKTVSNWVMGEVTRALNDDNNRSIAECPVTPALLADLLKLMEKGTISGKIAKTVFDEMYKTGKASEKIVEEKGLVQVSDTGAIEAMVDEVLEKNPGQVAEYRGGKETLFGFFVGQVMRASKGKANPAVVNELLLKKLNS", - "output": "asparaginyl-tRNA synthase (glutamine-hydrolyzing) activity ; ATP binding ; glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity ; translation" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MSRIIMLIPTGTSVGLTSVSLGVIRAMERKGVRLSVFKPIAQPRAGGDAPDQTTTIVRANSTLPAAEPLKMSHVESLLSSNQKDVLMEEIIANYHANTKDAEVVLVEGLVPTRKHQFAQSLNYEIAKTLNAEIVFVMSQGTDTPEQLNERIELTRSSFGGAKNTNITGVIINKLNAPVDEQGRTRPDLSEIFDDSSKAQVIKIDPAKLQESSPLPVLGAVPWSFDLIATRAIDMARHLNATIINEGDIKTRRVKSVTFCARSIPHMLEHFRAGSLLVTSADRPDVLVAACLAAMNGVEIGALLLTGGYEMDARISKLCERAFATGLPVFMVNTNTWQTSLSLQSFNLEVPVDDHERIEKVQEYVANYVNAEWIESLTATSERSRRLSPPAFRYQLTELARKAGKRVVLPEGDEPRTVKAAAICAERGIATCVLLGNPDEINRVAASQGVELGAGIEIVDPEVVRESYVARLVELRKSKGMTEPVAREQLEDNVVLGTLMLEQDEVDGLVSGAVHTTANTIRPPLQLIKTAPGSSLVSSVFFMLLPEQVYVYGDCAINPDPTAEQLAEIAIQSADSAIAFGIEPRVAMLSYSTGTSGAGSDVEKVREATRLAQEKRPDLMIDGPLQYDAAVMADVAKSKAPNSPVAGRATVFIFPDLNTGNTTYKAVQRSADLISIGPMLQGMRKPVNDLSRGALVDDIVYTIALTAIQASQQQQ", - "output": "cytoplasm ; phosphate acetyltransferase activity ; acetyl-CoA biosynthetic process" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MRWLPGLLLIASIGFHQSLADRVLVLGETAAVKDTHSVFLNSVKERGHELTVRAADDSQLALFKHGQLIFDHLFILAPGVQVFGGSLSPSEISKFVDAGGNVLVAAGSNIGDALREIAAEHGFEFEEAGTSVIDHHNYDQTLDSGDHTTLVVGKDQLISAELIVGNSAKLHPVLFKGIGLVAGKTNNLALSIVRASGTAYSYDPKAVRATNPSIAGSRTLLVGGLQSRNNARIVFTGSSELFSNTFFSAKTNSVNPSVQGAQSGNADFATAITRWVMKESGVLRVKTVNHHKKGETVPPVEGYFITEDVVYTIEIEELKNGKWVPFQGKDVQLEFVRIDPFVRATLKNSNGRLSVAFKLPDVLGVFKFLVDYRRVGYTHLYDVQQVSVRPLWHTQYERFIRSAYPYYASSFSMMAGLVLFSIVYLYHKDTPVKGAKVLDSEKKKN", - "output": "oligosaccharyltransferase complex ; protein N-linked glycosylation ; protein N-linked glycosylation via asparagine" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MKALIVDDEPLARNELQYLLNLNDAIDEIEEAENIEETLEKLLYNTFDLIFLDINLMDESGIDLAQKINKMKRSPHIIFATAHEKFAVKAFELNATDYILKPFEKERINQAVNKVDMAKDKPKNKDKTITPKYIDYSDDERAQTHVLPIEVDERIHILNFTDIIALSVNNGITTIDTTKQSYETTETLNHYEKKLPSSLFIKIHRATIVNKEHIQTIEHWFNYTYQLTLTHEFKYQVSRSYMKTFKQQLGLQ", - "output": "cytoplasm ; DNA binding ; phosphorelay response regulator activity" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEILEAFKVFDKDGNGFISAAELRHIMTNLGEKLTDEEVDEMIREADIDGDGQINYEEFVKMMMSK", - "output": "calcium ion binding" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MAETPRLLFVHAHPDDESLGTGATIAHYTAAGADVRVVTCTLGEEGEVIGERWAELAVDRADQLGGYRIGELTAALRELGVGEPCYLGGAGRWRDSGMPGTPKRRRQRFIDADEREAVGALVAVIREQRPHVVVGYDPAGGYGHPDHVHVHTVTTAAVAAAGAGDFPGEPWAVPKFYWSVFATRPFEAAVQALTPEDLRPDWSMPSAEQFTFGYADDHIDAVVAAGPHAWAAKRAALAAHATQVVVGPTGRACALSNNVALPILDEEHYVLVAGAAGARDERGWETDLLAGLEFGAAPRR", - "output": "N-acetylglucosaminylinositol deacetylase activity ; zinc ion binding ; mycothiol biosynthetic process" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MGPKLFKPSIDWSRAFPDSVYWVGKAWTISAICVLAILVLLRYLTPWGRQFWRITRAYFVGPNSVRVWLMLGVLLLSVVLAVRLNVLFSYQGNDMYTALQKAFEGIASGDGTVKRSGVRGFWMSIGVFSVMAVLHVTRVMADIYLTQRFIIAWRVWLTHHLTQDWLDGRAYYRDLFIDETIDNPDQRIQQDVDIFTAGAGGTPNAPSNGTASTLLFGAVQSIISVISFTAILWNLSGTLNIFGVSIPRAMFWTVLVYVFVATVISFIIGRPLIWLSFRNEKLNAAFRYALVRLRDAAEAVGFYRGERVEGTQLQRRFTPVIDNYRRYVRRSIAFNGWNLSVSQTIVPLPWVIQAPRLFAGQIDFGDVGQTATSFGNIHDSLSFFRNNYDAFASFRAAIIRLHGLVDANEKGRALPAVLTRPSDDESVELNDIEVRTPAGDRLIDPLDVRLDRGGSLVITGRSGAGKTTLLRSLAELWPYASGTLHRPGGENETMFLSQLPYVPLGTLRDVVCYPNSAAAIPDATLRDTLTKVALAPLCDRLDEERDWAKVLSPGEQQRVAFARILLTKPKAVFLDESTSALDTGLEFALYQLLRSELPDCIVISVSHRPALERLHENQLELLGGGQWRLAPVEAAPAEV", - "output": "extracellular region ; plasma membrane ; ABC-type transporter activity ; ATP binding ; ATP hydrolysis activity ; response to host immune response" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MRIEEGLKLGFKDVLIRPKRSTLKSRSEVALERQFTFKHSGWNWSGVPIIAANMDTVGTFRMAEVLASFDILTAVHKHYTLEQWAEFVKRSPESVLRHVMVSTGTSSADFDKMKQILALSPSLKFICIDVANGYSEHFVSFLQRAREACPDKVICAGNVVTGEMVEELILSGADIVKVGIGPGSVCTTRVKTGVGYPQLSAVIECADAAHGLGGQIVSDGGCSVPGDVAKAFGGGADFVMLGGMLAGHDECEGRVVEENGEKFMLFYGMSSESAMKRHVGGVAQYRAAEGKTVKLPLRGSVDNTVRDIMGGLRSACTYVGASHLKELTKRTTFIRVAEQENRVFGTD", - "output": "GMP reductase complex ; GMP reductase activity ; metal ion binding ; purine nucleotide metabolic process" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MSTIPVTIDFSGGAEFLVKAKAQKVQIPADSTLRDVLKFVRDNLVTDVHRINMLLNDDASEVAHGVITLINDTDTGLLLEYDTVIEAGDTITFVSTLHGG", - "output": "cytosol ; nucleus ; protein tag ; protein urmylation ; tRNA thio-modification ; tRNA wobble uridine modification" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MPTQSVDSVKAVRVRPFSQREKNSGSKCVISMHSRTTTTTQDPKNPEHVKTFTFDLAYWSHNGFQRDKDGVLISADPSRKFAGQRDVFHDLGRGILDSAWQGYNATLLAYGQTGSGKSYSMIGFGCKQGIIPTVCEELFRAIENQGRNQEHQVMFSMLEIYKEIIRDLLSRTKKPGGLRIREDQQLGFYVEGLKSVPCENYAQIERLMEQGTKIRTTASTNMNASSSRSHLVITIQFKQVFLDRDLTKQSSINLVDLARSERQKSSGSEGDRLREGSCVNLSLTNLGSVISVLADAAMGKKVLHIPYRDSVLTKLLQSALGGNSRTALVAAVSPADICYEETLSTLRYAERERKIRNRAVANTWTLMRKSRAENSKLLPMMTFPHLLNLSEDPQLTRVLKYFIQAGTQPAPCPRPALSPPHPALRISDKHASFTNADGKVTVTPHSKCKVAVNGVPITTRTKLQHLDRLILGSNSTYLYVGFPSEWGSEDLSRFDYDFFQLERAAAEGASADKLGAADGGDGKAGPSVLAAFQDYIKLMPLVSEANQMSEEPKKGLNMELKVKNLASSDSRGYDLQKEVLVKVTHHGSHEVWIWSKAKFINRKFLMQELYQRFLDGDHGPVARDDDPFWDPVEVVRLGSAHIWLQSLAYCMKLEEQVEFLNCDGLEEAVLHTCIAPCSPTGQTHGEEDVVIDPLELLGKRMDFQIHIVRCLGVNWMKEDAKRGTQIGYRIYDLPNTIYTKPVWKSVNPQIEETVQFAALTASQEFLNYLRTNALIVDLWGLQEGCTELSCSQLGLMVTGEGHILVDTKKISTVKDISQAASNQIPELYLKLLKLEQETEPLRNINRALREENVLLKASLAKTASGQAPKPSNTLKISGMTAQLPSAGEMSQMCTQQAGSDRELAKALKVFYQSMNTARGQLFRLRRHQPPEVDQMLRPFIHQRSQMFKDLGDLRESSLWTLKMTLLL", - "output": "kinesin complex ; microtubule ; mitochondrial membrane ; ATP binding ; ATP hydrolysis activity ; microtubule binding ; microtubule motor activity ; cytoskeleton-dependent intracellular transport ; microtubule-based movement ; mitochondrion organization ; organelle transport along microtubule" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MAQTIDIANPTRTQAILNEYGLRAKKKFGQNFLTDLNVLHNIVEAAEITAEDYVIEIGPGIGALTEQLARSAKKVLAFEIDSQMVEVLADTLKPYDNVKVIENDVLKVDLAKVISEEFGDNAHVKIVANLPYYITTPILIQLLRSNINWDNIVVMMQREVADRLNAAVGTKSYGVLTLTIQYFAQATLAIKVPASSFNPSPNVDSAVVKLTPLKPTTVVENVGKLFGVIKGSFSHRRKSLWNNMLQTYGKDAGTKEQLTVALKSAQIDPAIRAERLNLEQFTQLYLALRDQNLTQ", - "output": "cytoplasm ; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity ; RNA binding" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MTAAITYEHIKTCKQSGARLGRVHTPHGTIETPMFMPVGTLATVKTMSPEDLKAMDAQIILSNTYHLWLRPGEEIIKEAGGLHQFMNWDKPILTDSGGFQVFSLSDLRKITEEGVHFRNHLSGEKLFLSPEKAMQIQHVLGSDIMMAFDECPPYPADHSYMKASVERTSRWAERCLAEHKRSGKDSVQGLFGIIQGGEYEDLRKQSANDLTALDFPGYAVGGLSVGEPKDVMNHVLEFTTPLMPEDKPRYLMGVGSPDSLIDGAIRGIDMFDCVLPTRIARNGTCMTSAGRLVVRNAKYARDFSPLDEKCDCHVCRTYSRAYIRHLIKCEETFGFRLTTYHNLYFLLNLMKQVRQAIMDDCLLDFREQFFEEYGFNKENARNF", - "output": "metal ion binding ; queuine tRNA-ribosyltransferase activity ; queuosine biosynthetic process ; tRNA-guanine transglycosylation" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MNKVVLLCRPGFEKECAAEITDKAGQREIFGFARVKENAGYVIYECYQPDDGDKLIRELPFSSLIFARQWFVVGELLQHLPPEDRITPIVGMLQGVVEKGGELRVEVADTNESKELLKFCRKFTVPLRAALRDAGVLANYETPKRPVVHVFFIAPGCCYTGYSYSNNNSPFYMGIPRLKFPADAPSRSTLKLEEAFHVFIPADEWDERLANGMWAVDLGACPGGWTYQLVKRNMWVYSVDNGPMAQSLMDTGQVTWLREDGFKFRPTRSNISWMVCDMVEKPAKVAALMAQWLVNGWCRETIFNLKLPMKKRYEEVSHNLAYIQAQLDEHGINAQIQARQLYHDREEVTVHVRRIWAAVGGRRDER", - "output": "cytoplasm ; S-adenosylmethionine-dependent methyltransferase activity ; methylation ; rRNA processing" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MTIIFVDNEEYNVDKSDNLLQACLSSGINIPYFCWHPVLGSIGSCRQCAVTIYKDLEDKVGQLVMSCMTSVLDGMIVSTSDKISRNFRKGIIELLMLNHPHDCPICEEGGSCHLQDMTVMAGHTVRRYRFTKRTHKNQYLGHFITHEMNRCISCYRCVRYYKDYSGGTDLGVFGISNNVYFGRYNDGCLESEFSGNLVEVCPTGVFTDKTYSKKYSRKWDMQYAPSICQHCCVGCNISVGEKYGKISRIENRYHNAINHYFLCDLGRFSYDYSNVDERLTYSIYRSQNKTKIINDVNKTIDKLAMKFKKSSKIIGIGSCRASVESNFSLQKLVGSENFYLGISQKEYDCLMLIKDILKDNQIHVPTLREIEKSDVIFLLGEDVTKTSPLIALSIRQSIKGQVKTQDVSKNIPIWHADAVKNSFRNNKNKLFITNLMNSSLDDIADESYYASTFDQVLLGAEVYKCISNNCISNVTLLKQDLLSCAKRIATALTLSKCPLIISGSHSYNLDLIKVSFNIAKSLKVIGKNVGLILLSSNVNSIGVSLLEGISIEKVINKVLLKQIDKIIVLENDLYRYLPESIVDTLFKSSSCTVVIDHLNTRTLKQADIAIPTCNSFESSGTVVNYEGRAQRFFKTYHPNSSENKKSILESWKWLHLLYCKLHKISVFWHSLDDVIEEISLKIFSFSKLKDVAPNSSFKIFGQKLARSHHRASGRTALYSNINIHEPRPPQDNDTMFSFSMEGCQNVQNYLPYVPFSWFPGWNSVQSWNTYKKINNENYGKHLFQDTTKFVLTYYKLNCKNVNKIEDLYLIVPCYFLFCNNELAQYSPVIQENVLKNAYGIINTEDAKVLLIESGSKIEFSYLNKNFSIKVQLSKEFKKGQLGLPLGMADFPFFLAEKQVKVFRKISI", - "output": "membrane ; 2 iron, 2 sulfur cluster binding ; 4 iron, 4 sulfur cluster binding ; metal ion binding ; NADH dehydrogenase (ubiquinone) activity ; quinone binding ; ATP synthesis coupled electron transport" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MSKPFKLNSAFKPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPTMVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIEQMRLSATKAMLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMIIDQRAILRRLAELQYARNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFDEEVERLSLFDPLTGQIVSTIPRFTIYPKTHYVTPRERIVQAMEEIKEELAARRKVLLENNKLLEEQRLTQRTQFDLEMMNELGYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVVDESHVTIPQIGGMYRGDRARKETLVEYGFRLPSALDNRPLKFEEFEALAPQTIYVSATPGNYELEKSGGDVVDQVVRPTGLLDPIIEVRPVATQVDDLLSEIRQRAAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDIDTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAARNVNGKAILYGDKITPSMAKAIGETERRREKQQKYNEEHGITPQGLNKKVVDILALGQNIAKTKAKGRGKSRPIVEPDNVPMDMSPKALQQKIHELEGLMMQHAQNLEFEEAAQIRDQLHQLRELFIAAS", - "output": "cytoplasm ; excinuclease repair complex ; ATP binding ; ATP hydrolysis activity ; DNA binding ; excinuclease ABC activity ; helicase activity ; nucleotide-excision repair ; SOS response" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MATRLANVPQREAGTILERKEQALKPPAMFKVVLLNDDYTPMEFVVMILQQYFSRDRETATQIMLTVHREGKGVCGIYTRDIAATKVELVSTHARQAGHPLQCVMEEA", - "output": "protein catabolic process ; proteolysis" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MIELGVNIDHVATLRQARRTWEPDPAWAAMEAHLGGADGITVHLREDRRHIQDEDVRRLRELTQVKLNLEMAATDEMVGIACALRPEMAMLVPEGRHEVTTEGGLDVLAQEGRLKDVVARLADAGIVTSVFIDAELGQVEAAARIGARVCEIHTGPYAHAFHAAGRDPQSAAVVDEIDKVRRAGEAIRALGMRFNAGHALNYYNVQPIARLPEVRELHIGHAIVSRSVFTGLRDAVREMKRLMREAAGVGR", - "output": "cytoplasm ; pyridoxine 5'-phosphate synthase activity ; pyridoxine biosynthetic process" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MINKNEWLTVGLITSCHGINGQVKVKSLSDFEERFLKPGMRWLQKENEPPSKIELISGFKQPGKETFIVKLQGINTRNDAEQLKTFKILVRTDKLPKLKKEEFHLLELINLEVKTLENDELKTIGKVINLENEKNNLLIIELFKNQKKVLIPFVKEIVPLVDIKNQFVIINPPNGLLEL", - "output": "cytoplasm ; ribosome ; ribosome binding ; ribosomal small subunit biogenesis ; rRNA processing" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MRRIQSIARSPIAIALFMSLAVAGCASKKNLPNNAGDLGLGAGAATPGSSQDFTVNVGDRIFFDLDSSLIRADAQQTLSKQAQWLQRYPQYSITIEGHADERGTREYNLALGQRRAAATRDFLASRGVPTNRMRTISYGNERPVAVCDADTCWSQNRRAVTVLNGAGR", - "output": "cell outer membrane ; cell cycle ; cell division" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MQVTQTLNEGLKRGYTITLTGAELDAKVTEKLIEVQPEVEIKGFRKGKVPMAMLRKNFGDRVLGDVLNESVDGAIKDLLDQSGDRPALQPKVEMENGKDWKPGTDAIFTVSYEALPPIPAFDRATVTLERLVVKADEASVTEALENLAKSAQAFEDRKKGTKAKDGDQVVIDFEGFLGDEPFEGGKGEEYPLVLGSNSFIPGFEDQLVGAKAGEDVEVKVTFPAEYGAAHLAGKEATFKCHVHAVKAPKPAEIDDELAKKFGAADLEALKGQVASRLEAEYKGASRAILKRALLDILDAQVKFDLPPSLVEAEAGQIAHQLWHEENPDHHGHDHGAVEPTEEHKTLAERRVRLGLLLAELGRNEKIEVTDAEMTQAVLAAARQYPGHEREFFEFVKGNAQMQQQIRAPLYEEKVIDFIVAGAAVTEKEVSKEELQKAIEALDEL", - "output": "cytoplasm ; peptidyl-prolyl cis-trans isomerase activity ; cell cycle ; cell division ; protein folding ; protein transport" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MILHAQAKHGKPGLPWLVFLHGFSGDCLEWQEVGEAFADYSRLYVDLPGHGGSAAISVDGFDDVTDLLRKTLVSYNILSFWLVGYSLGGRVAMMAACQGLAGLCGVVVEGGHPGLQNAEQRAERQRSDRQWAQRFRSEPLTAVFADWYQQPVFASLNDDQRRELVVLRSNNNGATLAAMLEATSLAVQPDLRANLSARTFAFYYLCGERDSKFRALAAELAADCHVIPRAGHNAHRENPAGVIASLAQILRF", - "output": "2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase activity ; menaquinone biosynthetic process" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MSGAAFSRQRGQLLSDTLAAAKAEGRSALIAYLPAGFPTVDGGIAAIKAVFDGGADVVEVGLPHSDPVLDGPVIQTADDIALRGGVRIADVMRTVREAHEATGKPVLVMTYWNPIDRYGVERFTAELAEAGGAGCILPDLPVQESALWREHAEKHGLATVFVVAPSSKDARLAEITAAGSGFVYAASLMGVTGTRASVGEQAQDLVRRTRATTDLPVCVGLGVSNATQAAEVAGFADGVIVGSAFVKLMLDAEDEAAGLEAVRALAGELAKGVRGGD", - "output": "tryptophan synthase activity" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MTKITVNYTVDVKDIQPKHVRSESNPQNQNKIRRAWVLSLSDNAMEVIQNKIKSAPARHAYYEAIDREVSNKWIELMRKHTTESLNAGAKFIMTSCGERLEDDYCGNADERLIVAAQIVAETIAADFNR", - "output": "DNA replication" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MAQTMLLTANAKVDLRSKESLVERLKPKPLSSLFLPSLPLRFSSSSTNASSSKFTSTTVALFKSKAKAPPKKVAPPKEKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFNLLGAIGALGDRGKFVDDPTPPTGLEKAVIPPGKSFKSALGLSEGGPLFGFTKANELFVGRLAQLGIAFSIIGEIITGKGALAQLNFETGVPINEIEPLLLFNIAFFFFAAINPGTGKFITDEEED", - "output": "chloroplast thylakoid membrane ; photosystem II ; mRNA binding ; protein domain specific binding ; nonphotochemical quenching ; photosynthesis ; thylakoid membrane organization" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MHLNIILLEASLELVPKEIVNHPAVIKNAKRRNKKPEDTLLDISLHYHAMKYLENSHKRGRPDILHQALLVILTDPVIKGDIFIHTIQSKIIKVNPNMRPPKNYLRFIGLMEQLLKYGKIPINGDETLMEVTNLTLDNIVNRYDLILLSEKGEKINPEEICKLDEKWLLGIGAFPHGDFSDKILNLAKKIYSISGFPLETQQVLCRIFSACNSILGWP", - "output": "rRNA (pseudouridine) methyltransferase activity ; rRNA binding ; rRNA base methylation" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MLTITSYFGFLLAALTITPALFIGLNKIRLI", - "output": "chloroplast thylakoid membrane ; cytochrome b6f complex ; electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity ; photosynthesis" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MSSSSSSRIHNGEDVYEKAEEYWSRASQDVNGMLGGFEALHAPDISASKRFIEGLKKKNLFGYFDYALDCGAGIGRVTKHLLMPFFSKVDMEDVVEELITKSDQYIGKHPRIGDKFVEGLQTFAPPERRYDLIWIQWVSGHLVDEDLVDFFKRCAKGLKPGGCIVLKDNVTNHEKRLFDDDDHSWTRTEPELLKAFADSQLDMVSKALQTGFPKEIYPVKMYALKPQHTGFTNN", - "output": "cytoplasm ; N-terminal protein N-methyltransferase activity ; N-terminal protein amino acid methylation" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MNFDSIIKNGLVILENGEQEVEVGIKDGKIAAIGQDLGTSAKIIDAKGSIVSPGMIDAHVHITEPGGGYRDEWEGYDTGTRAAAKGGVTTFIEMPLNQVPATVDEESIQEKFKAGKGKLSVDVASYGGLVPFDLDGGIQELDSNGVVAYKCFLATCGDRSIEGDFMNVDDYSLYEGMKQIAKTGKILSIHAENAAITDKLGEIASKNGETSLRAYVDSRPVFTEVEPIRKIILFAKETGCRVHIVHIACEEGVDEIVKAQQEGVDITCETCTHYLYFYKEELDHIGPVVKCSPPIREQSRLEGMWNRVLNGDISFVTSDHSPCTPDLKATDNAFEAWGGIAGLQNNVDVLFDEGVQKRNMPLSKFAAIIATNPAKRFNLASKGSIAVGKDADFVFIKKDAPYELKAEDLAYRHKISPYIGRKIGAQVVKTILRGVEIYDKEKGISNEKVGRFIP", - "output": "allantoinase activity ; cobalt ion binding ; zinc ion binding ; allantoin catabolic process ; purine nucleobase metabolic process" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MISSLRGTVLSVSGQTLLLEVHGVGYGVSVTPRHALELRHGSEATVLTSLVVREDSLTLFGFPGPDELRAFELLCGVTGVGPKSALAVLEHLDPEAMAQAVAAEDDAAFRRVSGIGPKTAKLIVLQLAGKLFVTQPRTRSASSAASTVTADVVTALIGLGWSERVARTAVDDAAAAAAEQGLPADMPRLLRVALGMLGPQQPAGAPAAAQAADR", - "output": "cytoplasm ; Holliday junction helicase complex ; ATP binding ; DNA binding ; four-way junction helicase activity ; DNA recombination ; DNA repair ; SOS response" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MKRLALALKQRKVASWKLEEVKELTELIKNSNTILIGNLEGFPADKLHEIRKKLRGKATIKVTKNTLFKIAAKNAGIDIEKLEQYLTGPNVFIFTKDNPFITNMFFENYKLRRYAMPGDKAEEEVVIPAGDTGMPAGPILSVFGKLKVQTKVQDGKVHVVKDTVVAKPGDVIPAEALPILQKLGIMPVYVKLKIKVAYHEGLVIPAESLKLDLEGYRSNITEAYRNAFTLAVEIAYPTPDVLKFTISKVFKNAIALASEIGYITPESAQAVISKAVAKAYALATAIGGKVDLGVQLPTVQQSQSQQPAAEEKKEEKKEEEKKGPSEEEIASGLASLFG", - "output": "cytosolic large ribosomal subunit ; large ribosomal subunit rRNA binding ; structural constituent of ribosome ; cytoplasmic translation ; ribosomal large subunit assembly" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MRICFLLLAFLVAETFANELTRCCAGGTRHFKNSNTCSSIKSEGTSMTCQRAASICCLRSLLDNACDSGTDIAKEEESCPSNINILGGGLKKECCDCCLLAKDLLNRNEPCVAPVGFSAGCLRSFNKCCNGDIEITHASEIITGRPLNDPHVLHLGDRCASSHCEHLCHDRGGEKVECSCRSGFDLAPDGMACVDRNECLTRQSPCTQSEDCVNTIGGYICQRRISRLVPHRHRANRIGNAPRRMRDDPYSRAGEYREASQANTEFGCPMGWLFQHGHCVDVDECNLGSHDCGPLYQCRNTQGSYRCDAKKCGDGELQNPMTGECTSITCPNGYYPKNGMCNDIDECVTGHNCGAGEECVNTPGSFRCQQKGNLCAHGYEVNGATGFCEDVNECQQGVCGSMECINLPGTYKCKCGPGYEFNDAKKRCEDVDECIKFAGHVCDLSAECINTIGSFECKCKPGFQLASDGRRCEDVNECTTGIAACEQKCVNIPGSYQCICDRGFALGPDGTKCEDIDECSIWAGSGNDLCMGGCINTKGSYLCQCPPGYKIQPDGRTCVDVDECAMGECAGSDKVCVNTLGSFKCHSIDCPTNYIHDSLNKNQIADGYSCIKVCSTEDTECLGNHTREVLYQFRAVPSLKTIISPIEVSRIVTHMGVPFSVDYNLDYVGQRHFRIVQERNIGIVQLVKPISGPTVETIKVNIHTKSRTGVILAFNEAIIEISVSKYPF", - "output": "basement membrane ; extracellular region ; calcium ion binding ; extracellular matrix structural constituent ; peptidase activator activity ; extracellular matrix organization ; positive regulation of locomotion ; protein localization" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MDPNCSCSTGGSCTCSSSCGCKNCKCTSCKKSCCSCCPVGCSKCAQGCVCKGASDKCTCCA", - "output": "cytoplasm ; cytosol ; lysosome ; nucleus ; copper ion binding ; metal ion binding ; zinc ion binding ; cellular response to cadmium ion ; cellular response to chromate ; cellular response to copper ion ; cellular response to zinc ion ; detoxification of copper ion ; intracellular zinc ion homeostasis ; negative regulation of growth ; negative regulation of neuron apoptotic process ; nitric oxide mediated signal transduction ; response to cadmium ion ; response to zinc ion" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MKFYKYCASGNDFVIFADSEKKDRSELAKILCNRYEGIGADGLIVIVPHDRYDFEWEFYNCDGSKANMCGNGSRAAAHFAHHHLKKSQYLNFLTGAGLIKSFVDDDIVEIKLSGIKDIKEAFEYKDRIWQGCNTGVPHIVTFVDDLSEFDINLCKEVRKKYNANVNFAKVEDDEFIRVRTYERGVEDETLACGTGMGACFYLAYLNQKVKDDILIKPKSNESLYFRLEEEQIFFRGKVKCCFEADYNFT", - "output": "cytoplasm ; diaminopimelate epimerase activity ; lysine biosynthetic process via diaminopimelate" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MDIVGGQNLRQMWDDLAGVYGDKTALIFESCEGIVRQFSYASLNEEINRTANLFYSLGIRKGDRVALHLDNCPEFIFCWFGLAKIGAIMVPINARLLGEESAWILQNSQVSLLVTSVQFYPMYREIRQDNSTPLNHICLIGEQLPADDGVSHFSQLQARQSATLCYTPALSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQIALRDDDVYMTVMPAFHIDCQCTAAMPAFSAGSTFVLLEKYSARAFWDQVRRYQATVTECIPMMIRTLMVQPAAPTDRQHHLREVMFYLNLSAQEKDAFTERFGVRLLTSYGMTETIVGIIGDRPGDKRRWPSIGRVGFSYEAEIRDDQNRPLPAGEIGEICIKGIPGKTIFKEYYMQPEATAGALEPEGWLHTGDSGYQDEDGYFYFVDRRCNMIKRGGENVSCVELENIISAHPKIQDIVVVGIKDAIRDEAIKAFIVLNEGETLSEAEFFSFCENNMAKFKVPSFMEIRTDLPRNCSGKIIKKNLK", - "output": "acid-thiol ligase activity ; carnitine-CoA ligase activity ; crotonobetaine-CoA ligase activity ; carnitine metabolic process" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "METLSARFTVLQEKLMDIYESGVEDLDTQIQHWQLLRQEQIIYHYARRHGVTRLGYQPVPSLASSEAKAKDAISMVLLLESLKKSKYADEQWTLAQTSLEAVRSPPADCFKKGPKNIEVVFDGDPENLMSYTVWTYIYYLTDEDIWEKVEGHVDYTGAYYYEGKLKVYYLKFENDAKRYGVTGLWEVHVNKDTVFTPVTSSTPPVGDSTDSASRAALPEPSTSVSPERPPSQTARRYGRKASSPSTTSRRQRKGQRETTGTQRRRKSRSRSRSTNRGGRDTRRSSSRGSSVSPTRGRRRGGGDSRRRGPVTRSRSRSLSRASSAGGGISPDKVGTAVRSVGRQSGGRLTRLLADAADPPVILLRGDANTLKCYRYRFRKKHAGGFRFVSTTWSWIGDASNDRIGRSRMLLAFYSESQREKFIQTMKLPTGVEWSLGQFDDL", - "output": "host cell nucleus ; DNA binding ; DNA-binding transcription factor activity ; nucleotide binding ; DNA replication ; regulation of DNA replication ; viral DNA genome replication" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MANIKSAIKRAKTSEK", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MLKIGIVGGTGYTGVELLRILSQHPEVNIEAITSRKEAGMDVAQLFPSLRGRIELKFSDPAEANLEKCDVVFFATPNGIAMKQVPSLLDAGVRIIDLAADFRIKDIAVWEKWYGMPHACPELVAEAVYGLPEINRDRIKTARLIANPGCYPTAVQLGFLPLVESGAADLDHLVADAKSGVSGAGRNAEIHTLFAEAADNFKAYGVSGHRHLPEIRQGLSQAAKHPVGLTFVPHLTPMIRGIHATLYVKLLKEVDLQALYENRYVNEPFVDVLPAGSHPETRSVRGSNLCRIAVHRPQGGDTAVILSVTDNLVKGAAGQAVQNMNLMFGLPETLAITHLPLFP", - "output": "cytoplasm ; N-acetyl-gamma-glutamyl-phosphate reductase activity ; NAD binding ; NADP+ binding ; protein dimerization activity ; arginine biosynthetic process" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MSLANHTFSNPSRVLQRNESLFTNKNILVAGNIDDEYPLQLQALANSSTFCFSDYRYYSVLKDKLTTSEVHFTDNYQGETKFDLLLIFLPKAKQETLYLLANLTPHLQPGASIILVGEKKCGIKSADSLLASYSNRINMIDSARHCSILHAELNQPVNAFTQSQWIKTYPLNINNTELQICSLPGVFSYGELDKGSELLLQNLPDKMSGRVLDFGCGAGVIACYVLKKHPQLSVDLVDINAFALASAKLSLQSNQLEGNVFPSNVFSDIKEKYNILLSNPPFHSGKNTDYTAAETFINQSTNHLKSKGKLSIVANRFLNYEGLLFKAFSNVKIDQESNKFKVLSCITKT", - "output": "cytoplasm ; 16S rRNA (guanine(1207)-N(2))-methyltransferase activity ; nucleic acid binding" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MSNRKYFGTDGIRGRVGNAPITPDFVLKLGWAAGKVLARHGSRKIIIGKDTRISGYMLESALEAGLAAAGLSASFTGPMPTPAVAYLTRTFRAEAGIVISASHNPFYDNGIKFFSIDGTKLPDDVEEAIEAEMEKEITCVDSAELGKASRIVDAAGRYIEFCKGTFPNELSLNGLKVVVDCANGATYHIAPNVLRELGATVIAIGCEPNGVNINEEVGATDVRALQARVLAEKADLGIALDGDGDRVIMVDHEGNKVDGDQIMYIIAREGLRQGQLRGGAVGTLMSNMGLELALKQLGIPFARAKVGDRYVLEKLQEKGWRIGAENSGHVILLDKTTTGDGIVAGLQVLAAMVRNHMSLHDLCSGMKMFPQILVNVRYTAGSGDPLENEAVKAVTADVEATLGNRGRVLLRKSGTEPLIRVMVEGEDEAQVTAFAHRIADAVKAV", - "output": "magnesium ion binding ; phosphoglucosamine mutase activity ; carbohydrate metabolic process" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MRLVLLGPPGSGKGTQAAQMKETLQIPHISTGDLLRSEVVAGTPLGLQAKQVMAQGDLVSDAILIGMLESRLSHTDVVKGFILDGYPRNLSQAAALDGLLAKLGHPLNAVVQLEVPTDVLVERIAGRAQAEGREDDTPDAVRKRLQVYNDSTAPVIGFYQQRGILLRVDGVGRLDEVSQRIVVALGC", - "output": "cytoplasm ; adenylate kinase activity ; ATP binding ; AMP salvage ; phosphorylation" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MSYRPYQQIERRKSRQIHVGKVAVGGDAPISVQTMTNTLTTDAEATIAQIRRAELAGVDIVRVSCPDQESTIALKEIVREVNVPIVADIHFHYRRAIEAAEAGAACLRINPGNIGSAERVREVVKAARDHGCAIRIGVNAGSLERHLLEKYGEPNPDALVESALEHAKILQDHDFHEFKISVKASDVFLAVAAYQQLAEVCDHPLHIGITEAGGRRTGTVKSAIGLGNLLWAGVGDTMRVSLSAEPEEEVHVGWEILKGLGLRHRGVKIISCPSCARQGFNVIETVAALEERLAHIQTPLTLSIIGCVVNGPGEALMTDIGLTGGGGGRHMIYNAGKTDHTIAADGMVDHIVTLVEEKAARIVEEEAAAKAAAEQAAQEAALQHETV", - "output": "4 iron, 4 sulfur cluster binding ; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity ; iron ion binding ; isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway ; terpenoid biosynthetic process" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MPRSLKKGPFVDHHLLKKVFEAQESNSKKPIKTWSRRSMIVPDMIGLTIAVHNGQQHVPVLMTEEMVGHKLGEFVVTRNYRGHAADKKAKKK", - "output": "cytoplasm ; small ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MQLTELIETTVTGLGYELVDLERTGRGMLCIYIDQPAGISLDDCEKVTRQLQHVLTVENIDYERLEVSSPGLDRPLKKLADFERFAGSEVSVTLKKPLDGRKTYRGILHAPNGETIGLEFERNKGEAAMLDFTLADIDKARLIPQVDFRSRK", - "output": "cytoplasm ; ribosomal small subunit biogenesis" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILAKEVLAKHDENYTPPEVEKAMEANHRRPASVYKDPAS", - "output": "ATP-binding cassette (ABC) transporter complex ; periplasmic side of plasma membrane ; heme binding ; metal ion binding ; cytochrome c biosynthetic process ; cytochrome complex assembly ; heme import across plasma membrane ; protein-heme linkage" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MSDDRINYLKNKLVQYPDFPKKGILFEDIMPIFQDPRAFGILIDLLLEAVETEFNNIDVIVGLEARGFLFGPTLALRANCAFVPVRKPNKLPGDLVVVSYNKEYSTDSFAIQKGTIKPGQRVLIVDDILATGGTALAADELVTRLGGELVGHLFLLELTFLQGRKRLMAPTYTLLTGQDEAPDGSEFA", - "output": "cytoplasm ; cytosol ; nucleus ; adenine binding ; adenine phosphoribosyltransferase activity ; AMP binding ; metal ion binding ; pentosyltransferase activity ; adenine salvage ; AMP salvage ; purine ribonucleoside salvage" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MMINEQIRAREVRLVGANGDQLGIKSRNDALDLAANLNLDLVLVAPNAKPPVCRIMDYGKFRFEQQKKEKEQRKNQKVISMKEVRLSPTIDEHDFNTKLRNAIKFLEKGDKVKASIRFKGRAITHKEIGQRVLDRFSEACAEVSTIESKPKMEGRSMFLVLAPKNDK", - "output": "cytoplasm ; translation initiation factor activity" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MEEFQGYLELDRSQQHDFLYPLIFREYIYALAHDHGLNRSILLDNVGYDNKSSLLIIKRLISRMYQQNHLIISANDSNPPQNWGYNKNLYCQMISEGFAVIVEIPFSLRLVSSLEGTETVKSYNLRSIHSIFPFLEDKFPHLNYGSDVLIPYPIHLEILVQTLRYWAKDPSSLHLLRLFLHDYYNLNSLITPNKSIFSKSNPRLFLLLYNSYVCEYESILLFLRNQSSHLQFTSSWIFFERIHFYEKIKYPVEEVFANDFPAILWFFKDPFMHYVRYQGKSILASKDTPLLMNKWKYYLVNLWQCHFYVWSQPGRIDINQLSKHSLDFLGYLSSIRPNLSVVRSQMLENSFIMDNAMKKFDTLVPIIPLIGSLAKVKFCNALGHPISKSTWADSSDFDIIDRFVRICRNLSHYYSGSSKKKSLYQIKYILRLSCVKTLARKHKSTVRTFLKRLGSKLLEEFFTEEEQILSLIFPRASSTLKRFYRERIWYLDIFCINDLVNHE", - "output": "chloroplast ; RNA binding ; mRNA processing ; RNA splicing ; tRNA processing" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "NTGAKAPRKHLANKAARKTAAPANAGIKKPHRYRPGTVALREIRKYQKSTDLLIRKLPFQRLVREIASEYKNDLRFQSSAVLALQEAAEAYMIGLFEDTNLCAIHGKRVTIMP", - "output": "nucleosome ; nucleus ; DNA binding ; protein heterodimerization activity ; structural constituent of chromatin" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MNREGAPGKSPEEMYIQQKVRVLLMLRKMGSNLTASEEEFLRTYAGVVNSQLSQLPPHSIDQGAEDVVMAFSRSETEDRRQ", - "output": "beta-catenin destruction complex ; beta-catenin-ICAT complex ; cytoplasm ; cytosol ; nucleoplasm ; nucleus ; armadillo repeat domain binding ; beta-catenin binding ; anterior/posterior pattern specification ; branching involved in ureteric bud morphogenesis ; negative regulation of canonical Wnt signaling pathway ; negative regulation of DNA binding ; negative regulation of DNA-binding transcription factor activity ; negative regulation of mesenchymal cell proliferation ; negative regulation of protein binding ; negative regulation of protein-containing complex assembly ; negative regulation of smooth muscle cell proliferation ; negative regulation of transcription initiation by RNA polymerase II ; negative regulation of Wnt signaling pathway ; positive regulation of monocyte differentiation ; positive regulation of osteoblast differentiation ; regulation of vascular permeability involved in acute inflammatory response ; Wnt signaling pathway" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MVFGTGVDNVELSRIQKALTRSERFVEQVLTAVELEKYNSFQSTARKTEFLAGRWAAKEAFSKAYGTGFGKALGMHDLEIKNDELGKPFFTKHPFDGQVHLSISHSNLEAVAFVVLEKN", - "output": "cytoplasm ; holo- synthase activity ; magnesium ion binding ; fatty acid biosynthetic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MHFEVHGRTDAEAPTILLSSGLGGSSAYWLPQIEALSDHFRIVTYDHRGTGRTGGEVPTEGGISAMADDVLEIVSALNLEKFHFMGHALGGLIGLDIALRQPRLIDRLVLINAWSKADPHSGRCFDVRIELLEKSGVDAFVKAQPLFLYPAAWMSEHQERLARDDAHGVAHFQGKTNVLRRIAALRAFDIDARLGEIGNPVLVVATKDDLLVPYTRSLRLAEGLPQSELCLLDFGAHAVNITEPDLFNTRLLQFLLPADQT", - "output": "hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides ; nitrogen utilization ; uracil catabolic process" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MLKLFSAFRKNKIWDFNGGIHPPEMKTQSNGTPLRQVPLAQRFVIPLKQHIGAEGELCVSVGDKVLRGQPLTRGRGKMLPVHAPTSGTVTAIAPHSTAHPSALAELSVIIDADGEDCWIPRDGWADYRTRSREELIERIHQFGVAGLGGAGFPTGVKLQGGGDKIETLIINAAECEPYITADDRLMQDCAAQVVEGIRILAHILQPREILIGIEDNKPQAISMLRAVLADSNDISLRVIPTKYPSGGAKQLTYILTGKQVPHGGRSSDIGVLMQNVGTAYAVKRAVIDGEPITERVVTLTGEAIARPGNVWARLGTPVRHLLNDAGFCPSADQMVIMGGPLMGFTLPWLDVPVVKITNCLLAPSANELGEPQEEQSCIRCSACADACPADLLPQQLYWFSKGQQHDKATTHNIADCIECGACAWVCPSNIPLVQYFRQEKAEIAAIRQEEKRAAEAKARFEARQARLEREKAARLERHKSAAVQPAAKDKDAIAAALARVKEKQAQATQPIVIKAGERPDNSAIIAAREARKAQARAKQAELQQTNDAATVADPRKTAVEAAIARAKARKLEQQQANAEPEEQVDPRKAAVEAAIARAKARKLEQQQSNAEPEEQVDPRKAAVEAAIARAKARKLEQQQANAEPEEQVDPRKAAVEAAIARAKARKLEQQQTNAEPEEQVDPRKAAVAAAIARAQAKKAAQQKVVNED", - "output": "plasma membrane ; 4 iron, 4 sulfur cluster binding ; electron transfer activity ; metal ion binding" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MNTVRVTFLLVFVLAVSLRQADKDENRMEMQEKTEQGKSYLDFAENLLLQKLEELEAKLLEEDSEESRNSRQKRCIGEGVPCDENDPRCCSGLVCLKPTLHGIWYKSYYCYKK", - "output": "extracellular region ; sodium channel inhibitor activity ; toxin activity" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MPTINQLVRKPRKSKVEKSDSPALNIGYNSHKKVHTKLAAPQKRGVATRVGTMTPKKPNSALRKFARVRLSNLIEVTAYIPGIGHNLQEHSVVLIRGGRVKDLPGVRYHIVRGALDTAGVTDRKQGRSKYGTKKPKA", - "output": "small ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; tRNA binding ; translation" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MFAEGRIPLWLVGLIAGIGAISVLGLFFYGAYAGIGSSM", - "output": "photosystem II reaction center ; plasma membrane-derived thylakoid membrane ; photosynthesis" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MGEVQREKVAVIIGPTAVGKTKLSIDLAKALNGEIISGDSMQIYRTMDIGTAKVTKEEMDGIPHYMVDIKNPEESFSVAEFQERVRKHIREITERGKLPIIVGGTGLYIQSVLFDYQFTDDAGDVIYREHMEKLALERGVEYVHKKLQEVDPESAERIHANNVRRVIRALEIFHTTGEKMSDQLEKQENELLYDVSLIGLTMDREMLYDRINLRVDIMMDQGLLEEVEGLYNRGIRDCQSIQAIGYKEIYDYFEDRVSLEEAVSQLKTNSRRYAKRQLTWFRNKMDVTWFDVTDGEKTSEILRYIEGKLQLKSNNSK", - "output": "ATP binding ; tRNA dimethylallyltransferase activity ; tRNA processing" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MASLLGAYPWPEGLECPALDAELSDGQSPPAVPRPPGDKGSESRIRRPMNAFMVWAKDERKRLAVQNPDLHNAELSKMLGKSWKALTLSQKRPYVDEAERLRLQHMQDYPNYKYRPRRKKQAKRLCKRVDPGFLLSSLSRDQNALPEKRSGSRGALGEKEDRGEYSPGTALPSLRGCYHEGPAGGGGGGTPSSVDTYPYGLPTPPEMSPLDVLEPEQTFFSSPCQEEHGHPRRIPHLPGHPYSPEYAPSPLHCSHPLGSLALGQSPGVSMMSPVPGCPPSPAYYSPATYHPLHSNLQAHLGQLSPPPEHPGFDALDQLSQVELLGDMDRNEFDQYLNTPGHPDSATGAMALSGHVPVSQVTPTGPTETSLISVLADATATYYNSYSVS", - "output": "chromatin ; cytoplasm ; nucleoplasm ; nucleus ; DNA-binding transcription factor activity ; DNA-binding transcription factor activity, RNA polymerase II-specific ; RNA polymerase II cis-regulatory region sequence-specific DNA binding ; sequence-specific double-stranded DNA binding ; transcription cis-regulatory region binding ; anatomical structure morphogenesis ; cell differentiation ; endoderm formation ; negative regulation of cell population proliferation ; negative regulation of DNA-templated transcription ; positive regulation of cysteine-type endopeptidase activity involved in apoptotic process ; positive regulation of DNA-templated transcription ; regulation of canonical Wnt signaling pathway ; regulation of DNA-templated transcription" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MRTVIQRVKYAKVSVDGKILGEINKGLLVLLGITHEDSIKEVKWLVNKTKNLRIFEDEEEKMNLSLEDVKGKALIISQFTLYGNSIKGNRPSFIDAAKPDLAKDLYLKFIEELKSFDIETQEGEFGADMKVELLNDGPVTIIIDTKDANIK", - "output": "cytoplasm ; D-tyrosyl-tRNA(Tyr) deacylase activity ; Gly-tRNA(Ala) hydrolase activity ; Ser(Gly)-tRNA(Ala) hydrolase activity ; tRNA binding ; D-amino acid catabolic process ; tRNA metabolic process" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MAGHEVQYGKHRTRRSFSRIKEVLDLPNLIEIQTDSFQDFLDAGLKEVFEDVLPISNFTDTMDLEFVGYELKEPKYTLEEARIHDASYSAPIFVTFRLVNKETGEIKTQEVFFGDFPIMTEMGTFIINGGERIIVSQLVRSPGVYFNDKVDKNGKVGYGSTVIPNRGAWLELETDAKDIAYTRIDRTRKIPFTTLVRALGFSGDDEIVDIFGDSELVRNTIEKDIHKNPSDSRTDEALKEIYERLRPGEPKTADSSRSLLVARFFDPRRYDLAAVGRYKINKKLNLKTRLLNQTIAENLVDGETGEILVEAGTVMTRDVIDSIAEHIDGDLNKFVYTPNDYAVVTEPVILQKFKVVAPTDPDRVVTIVGNSNPEDKVRALTPADILAEMSYFLNLAEGIGKVDDIDHLGNRRIRAVGELLANQFRIGLARMERNVRERMSVQDNEVLTPQQIINIRPVTAAVKEFFGSSQLSQFMDQHNPLSELSHKRRLSALGPGGLTRDRAGYEVRDVHYTHYGRMCPIETPEGPNIGLINNLSSFGHLNKYGFIQTPYRKVDRSTGAVTNEIVWLTADEEDEFTVAQANSKLNEDGTFAEEIVMGRHQGNNQEFPSSIVDFVDVSPKQVVAVATACIPFLENDDSNRALMGANMQRQAVPLIDPKAPYVGTGMEYQAAHDSGAAVIAKHDGRVIFSDAEKVEVRREDGSLDVYHVQKFRRSNSGTAYNQRTLVKVGDLVEKGDFIADGPSMENGEMALGQNPVVAYMTWEGYNFEDAVIMSERLVKEDVYTSVHLEEFESETRDTKLGPEEITREIPNVGEDSLRDLDEMGIIRIGAEVKEGDILVGKVTPKGEKDLSAEERLLHAIFGDKSREVRDTSLRVPHGGDGVVRDVKIFTRANGDELQSGVNMLVRVYIAQKRKIKVGDKMAGRHGNKGVVSRIVPVEDMPYLPDGTPVDIMLNPLGVPSRMNIGQVMELHLGMAARNLGIHIATPVFDGASSEDLWETVQEAGMDSDAKTVLYDGRTGEPFDNRVSVGVMYMIKLHHMVDDKLHARSVGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGASNVLQEILTYKSDDVTGRLKAYEAITKGKPIPKPGVPESFRVLVKELQSLGLDMRVLDEDDNEVELRDLDEGEDDDVMHVDDLEKARVKQEAEEKQAEQVSEVVQED", - "output": "DNA-directed RNA polymerase complex ; DNA binding ; DNA-directed 5'-3' RNA polymerase activity ; ribonucleoside binding ; DNA-templated transcription" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MSADGRSGRLRFTKMHGAGNDFVVLDLRDGTPPPDAALAAQLADRHFGIGCDQILTIEAPRSEGAAAAYGIWNSDGSAARQCGNGARCVAAWLVRDGTAQGERFIIDSPATAHAVERLDGDRYAVAMGVPQFEPTQIPLAGFAHARDEYALPVHGETVRFGAVSMGNPHAVVEVGRVDAAPVERVGALLQQNAAFPDSVNVGFAQVVDPVHVRLRVFERGVGETLACGSGACAAAAVLMQRGRVERDVQVSLPGGELRIRWPGDQEQVVMSGPAVFVFDGEWNR", - "output": "cytoplasm ; diaminopimelate epimerase activity ; lysine biosynthetic process via diaminopimelate" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MNKDSTQTWGLKRDITPCFGARLVQEGHRLHFLADRAGFTGSFSEVQTLQLDEAFPHFVAHLELMLLSCELNPRYAHCVTLYRNGLTGEADTLGSHGYVYIAILNRHGFNRHLRVI", - "output": "positive regulation of cytoskeleton organization" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MPAHLLQEEISSSYTTTTTITAPPSRVLQNGGGKLEKTPLYLEEDIRPEMRDDIYDPNYQDKEGPKPKLEYVWRNIILMGLLHLGALYGITLIPTCKIYTFLWVLFYYVISALGITAGVHRLWSHRTYKARLPLRVFLIIANTMAFQNDVFEWSRDHRAHHKFSETDADPHNSRRGFFFSHVGWLLVRKHPAVREKGATLDLSDLRAEKLVMFQRRYYKPGVLLLCFILPTLVPWYLWGESFQNSLFFATFLRYAVVLNATWLVNSAAHMYGYRPYDKTINPRENILVSLGAVGEGFHNYHHTFPYDYSASEYRWHINFTTFFIDCMAAIGLAYDRKKVSKAAVLGRMKRTGEESYKSG", - "output": "endoplasmic reticulum membrane ; membrane ; iron ion binding ; oxidoreductase activity ; stearoyl-CoA 9-desaturase activity ; unsaturated fatty acid biosynthetic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MAAVSEVEVDGVVFPPVARPPGSGHAHFLAGAGVRGVEIAGNFIKFTAIGVYLEEGAAVPALAKKWAGKSADELAADAAFFRDVVTGDFEKFTRVTMILPLTGEQYSDKVTENCVAAWKAAGVYTDAEGAAADKFKEAFKPHSFPPGASILFTHSPPGVLTVAFSKDSSVPEGAVAAAAIENRALCEAVLDSIIGEHGVSPAAKRSIAARVSQLLKAESTGDVAAAEPAPVSA", - "output": "chalcone isomerase activity ; flavonoid biosynthetic process" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MTLAASSQRSQIIRSKFRSVLQLRIHRRNQDCTSDSDPWISASGPALAPALPTVPASFLVSPGVLSPEPAYCPWRAPKKESPKNSQHWKEPKVRGNLTYHLYMPPEQRQGPRANLQVERSTLGPPDPPLWEKNSQRPHPRMKPSSAGVSSPSPPSHKLELQTLKLEELTVSELRQQLRLRGLPVSGTKAMLLERMRGGTPPRERPKPRREDKEAAAPWPRLKPKALGTTRLPSTVKASATNRRLKFSGATDPLGAAPAPASVPAPTPSPALAPTPTPAPVPAPAPAPFPTPPASLTLEEELQEAIRRAQLLPNRNIDDILEDQVEPDDLLPPVPLDFPGSFDLLSPSPDSEGFSSVFSSSLPSPTSSLSPSPRALTDSLDWLEALSGGPPLGSGPPGPSIFSADLSDPSGSLLWELLPDPW", - "output": "nucleus ; transcription coregulator activity ; positive regulation of myotube differentiation ; positive regulation of transcription by RNA polymerase II ; regulation of transcription by RNA polymerase II" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MLSADEKQLILHAWEKVHTHQEDFGAEALERMFTVYPQTKTYFHHFDLHHGSEQIRRHGKKVVVALENAVHHMDNLSAALCKLSDLHAYNLRVDPVNFKLLSHCFHVVLAGHLGEEYSPQVHVAYDKFLAAVSDVLAEKYR", - "output": "hemoglobin complex ; heme binding ; metal ion binding ; oxygen binding ; oxygen carrier activity" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MKPNSHPEYVTTEVACSCGNTFTTRSTAKGGSIHVETCSACHPFYTGKQRVLDTAGRVAKFQQKYAKVQAKKGK", - "output": "ribonucleoprotein complex ; ribosome ; metal ion binding ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MKVGVYGASGRIGKLLLEELKGGYKGLELSSVFVRQKCETDFSSFSHAPLVTNDLKAFVKACECVVDFSLPKGVDHLLDVLLECPKILVSGTTGLEKETLEKMQKLALKAPLLHAHNMSIGIMMLNQLAFLTSLKLKDADIEIVETHHNLKKDAPSGTALSLYETCTKARGYDEKNALITHREGLRSKESIGIATLRGGDVAGKHTIGFYLEGEYIELSHTATNRSIFAKGALEVALWLKDKAAKKYEISEMFG", - "output": "cytoplasm ; 4-hydroxy-tetrahydrodipicolinate reductase ; NAD binding ; NADP binding ; oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor ; diaminopimelate biosynthetic process ; lysine biosynthetic process via diaminopimelate" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MKLSDFDFDLPEDLIATRPAVPRTSARLLVAKGRQISDSIVSDLPNWLSPGDRLVLNDTRVIPARLTGARHRDTAQGPMQARIEVTLLEPDAQGNWSALIKPLKKVKIAEEIIFSDRLRATLRAVKDGQGVLQFNLEGDDFDAALNAAGAMPLPPYIATRRPADERDKSDYQTVFAQNSGAVAAPTASLHFDKALLSELAARGVLFSYVTLHVGAGTFLPVKVEDVTTHKMHAEWGQVSAAAAAEINATKQAGKRVIPVGTTALRLIETAGREGQIKAWEGDTDIFIYPGFRFNVADALMTNFHLPKSTLMMLVSALMGYDEVRAIYDHAVAEKYRFFSYGDASLLIPQRD", - "output": "cytoplasm ; S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity ; queuosine biosynthetic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MNLRSLLASTPTQVLQPQHAALDLAITGLQTDSRRCQPGDLFLGMPGTQVDGGQFWPEAIAAGAVAVIVTPTALAQRPLSANPEACLILSDQMPVTAGAIAAAFYNQPAQTLKLIGVTGTNGKTTTTHLVEHFLNAADTKTALLGTLYNRWPGYSEVAQHTTPFATDLQAQLATAVDAGCQAAVMEVSSHALDQGRVNGCGFDVAVFTNLTQDHLDYHGTMEAYFAAKARLFAPPYLRGKAVINADDAYGQRLITMTPPGQCLTYSVVGTADFCTTDLQYGPTGVEGTIKTPDGAFPFRSPLVGQFNLANLLGAIAAGWTLGLPIETMLAVVPDFVGVPGRMERVVGQDSDPTVIVDYAHTPDSLENLLKAARPFIQGELICVFGCGGDRDRTKRPLMGEIAARLADRVIITSDNPRTEDPRQILADIVAGIPAASPVVVEADRAAAIRQAILSAQPGDGVLLAGKGHEDYQILGTTKIHFDDREQARLALAERQSA", - "output": "cytoplasm ; ATP binding ; magnesium ion binding ; UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase activity ; cell cycle ; cell division ; cell wall organization ; peptidoglycan biosynthetic process ; regulation of cell shape" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MSHSVEDIKSESRRLRGSLEQSLADAVTGALREDDQTLIKYHGSYQQDDRDIRDERRRQKLEPAYQFMIRTRTPGGVITPTQWLALDGIATRYANHSLRITTRQAFQFHGVIKRELKATMQAINATLIDTLAACGDVNRNVQVAANPLLSQAHATLYADAARVSEHLLPNTRAYYEIWLDEERVSGSGSEDEPIYGERYLPRKFKIGFAAPPLNDVDVFANDLGFIAILRDGQLLGYNVSIGGGMGASHGDAETWPRVANVIGFVTREQLLDIATAVVTTQRDFGNRAVRKRARFKYTIDDHGLDTIVAEIARRAGFALQPAQPFAFDHNGDRYGWVEGEDGLWHLTLSLPAGRIADTDTAAHLSGLRAIAQLNVGEFRMTPNQNLVIAGVLASERARVDALVAHYGLDAGNQSATALARGAMACVALPTCGLAMAEAERYLPDFGAALQPLLQQHGLAETPIVLRLSGCPNGCSRPYLAEIALVGKAPGRYNLMLGGDRRGQRLNTLYRENITEPEILAALEPLLARYAAERDHANDEGFGDFLHRAGVIALPPYPTHRRLDLELLA", - "output": "sulfite reductase complex (NADPH) ; 4 iron, 4 sulfur cluster binding ; heme binding ; metal ion binding ; NADP binding ; sulfite reductase (NADPH) activity ; cysteine biosynthetic process ; hydrogen sulfide biosynthetic process ; sulfate assimilation" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MKGHVARKRFGQNFLVDQGIIAAIISAVDPKRDETVVEIGPGLGAITEPLMARVDHLHVIEIDRDLIARLKKQHTPERMTVHEGDALAFDFASIGKNLRLVGNLPYNISTPLLFHLAEYVDVVHDMHFMLQKEVVERMVAEPGNADFGRMSVMLQYRFYLEWLIDVPPESFDPPPKVQSAVVRLIPKPVSELNAKSQEKLSQVALTAFSQRRKMLRNTMKTLLSDAAFTELGIDPTCRPEDVSVEDYVRIANYLS", - "output": "cytoplasm ; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity ; RNA binding" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MNEKHPGPLVVEGKLTDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAEQKLEPRHAMLLRCRLPGGVITTKQWQAIDKFAGENTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGVETFKAEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDDKWHLTLFIENGRILDYPGRPLKTGLLEIAKIHKGDFRITANQNLIIAGVPESEKAKIEKIAKESGLMNAVTPQRENSMACVSFPTCPLAMAEAERFLPSFIDNIDNLMAKHGVSDEHIVMRVTGCPNGCGRAMLAEVGLVGKAPGRYNLHLGGNRIGTRIPRMHKENITEPEILATLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDLWD", - "output": "sulfite reductase complex (NADPH) ; 4 iron, 4 sulfur cluster binding ; heme binding ; metal ion binding ; NADP binding ; sulfite reductase (NADPH) activity ; cysteine biosynthetic process ; hydrogen sulfide biosynthetic process ; sulfate assimilation" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MASTGSQASDIDEIFGFFSDGAPPTKKPRKLLPSLKTKKPRELVLVIGTGISAAVAPQVPALKSWKGLIQALLDAAIDFDLLEDEESKKFQKCLHEDKNLVHVAHDLIQKLSPRTSNVRSTFFKDCLYEVFDDLESKMEDSGKQLLQSVLHLMENGALVLTTNFDNLLELYAADQGKQLESLDLTDEKKVLEWAQEKRKLSVLHIHGVYTNPSGIVLHPAGYQNVLRNTEVMREIQKLYENKSFLFLGCGWTVDDTTFQALFLEAVKHKSDLEHFMLVRRGDVDEFKKLRENMLDKGIKVISYGNDYADLPEYFKRLTCEISTRGRSGMVREGQLNGSSAAHSEIRGCST", - "output": "Cajal body" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MSVKARRISGRLETVVTKVNYAFDPVDDDKIIRNRLLTRTTTTRGEPPLKKLQKKFTSFVLEVDKEEENYNDCGRLAKAFLQELSTFEIPLLKSQAVVEANLREKESFNEVKDETERQIMQAKAEIEDLKKQLEESKIDRQHKEECETIRKLISAQPPRSETEKVIYELNKEIAELEAESTASWRLLELRKKQFALLMHVVDELQNTMEDEQKSLVDEIRSASEDQRNITDAMSVD", - "output": "THO complex ; THO complex part of transcription export complex ; RNA binding ; mRNA export from nucleus ; mRNA processing ; RNA splicing" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MEENKSVAEGKAATGSLKESEETSAQNGELGEPEVQQTLKRTNSTESGGTGQKPPEEAPRRRFQIPRKSRDKRALQVISSGSREFEEILKILHSSYLDANSKASFSYKCARLVHNEFLEKEFTEKRRQLKFDGRLDKELVESYVFLLVDQEQMHSITEKGLHVGHSRMTTLGKPSMGVYLSRYADLLQANPLETGTTGDIFIFKVIKGKMKFVFDHIRNNQMDSFSGNGGLDPVPKHECHVLKNMNAVTALLGYRAFERTQYYFYEYGFDEVLKRPRHVCPYAVMSFGYKDELATRQPPLPTSGPVSFPTERSFDRSSFTLWRGQLLNKGKLLCYASLKSTSGPFIPYRLPERLDLDIVIKIEVIKKSIPAVLFYKETHNKPNEAKHGGIYSRLYEVVEKTRTGSHLQGLLQKIERENLALVKPLDDRGFMFLYFPSPMTSAYASAKTRLLHALFIYHESRLTQPVANVPVPPSFVPESHEFMPEVLTFVPALHFALHKSQSDTSADFNDVVEKHSRIYLKRRAEKLNKFKEYVLKPYDSRLDYKKSLYVAPRIKGHIESALRSYLFGSEAYTIPVDKAKEMLKENQRFQQFSPVSDYEPVEDDHDSNKYNKKCPVSYVETNSEKSSESTDWDIDKINGLINLIQKKKQSKPETDEPSGVGLKRKLDRQSEKAWKHRKCEENVHHDNEPGESAQSLISSLGGQDTDLRQETESLSSECIKMLLEKLADSCIDPAMAESLKTLKQNSTEELPSQKLKNLSQAHDTEREGAGQDQHIVYNDQTTDNQENTTCLSEEAQQAEGSHSDHSVLMEEKILDPPLESASPCPSNTAGNNCPAQGPNSLDLEMHWKLIPIAEANLTEEQLVYVSTEDALPNDPRAGHKRRGSRYSPLHETERQRPRHDRDYCRSLTTPSRTERNMLQSKHCHNGLIENTVLEVYNTFSEQLHDVLKQRDVPYMVPAAPPLLSSDDRVLKLSDCLCEQVSDICVQQYVDDLHTTLDSVVAAHINSCAVSRTGSPVTEIMAATEVHTFHPKQTVTEYPHVHEHFHVNDLHSDVREANPFSADHVYKVGEENAANGHALSHNSRDLSQETPEISTSGVTDLSEPHLAISNLINQMNPEVFNNLVKIITHVNKNSVKFYVHTEEENAICQNIKEYLLKLGNTECRPEKFLESKTKADKLLIIIQNEDIPNCIHRVPALVLLKRLPSVSFAGVDSLDDLKNHTYNEIFVSGGFIVSDESVLNPETVTIDELKKFLMFLEEINSPDANWQWKIHYKFHKRLKELGRLNTNALNILTLLTTYQKKNLVEILSYHLSCDPQNQQAPQLECLIKLQVQYMKQRHVLFLTEKDAARFPDYCDNGIVVTRMVDFMDNFSNLIGHHSPNNEEQRLSQLTNQGDETAPGEADSKEEEDMSLDSEDDTPPIEVCTDSWKPESQKQNISSLLELVDKDQTESPSTLNQGKTPTLDELQPITPVSVAGSTTGENSVSTGDELGSNTKDYNREVNLSHQFSHFSLLTHQTFLGSMYPTLTNPSQAEICFMNSYSQLTEPETSKNSERKQK", - "output": "chromosome ; nucleus ; negative regulation of gene expression, epigenetic" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MIISASTDYRAAAQRKLPPFLFHYIDGGAYNEQTLRRNTADLADIALRQRVLKNMSELSLETQLFGETQAMPVVLGPVGLSGMYARRGEVQAARAADKKGIPFTLSTLSVCPIEEVAPAIARPMWFQLYVLKDRGFMRNALTRAQAAGVKTLVFTVDMPVPGARYRDAHSGMSGPNAAARRLLQAIAHPQWAWDVGLNGKPHDLGNISAYLGKPTTLEDYMGWIATNFDPSISWKDLEWVREFWQGPMIIKGILDPEDAKDAVKFGADGIVVSNHGGRQLDGVLSTARALPAIADAVKGDITILADSGIRTGLDVVRMIALGADSVLLGRAFVYALATAGEAGVINLLTLIEQEMRVAMTLTGAKRIADINRDSLAVSERG", - "output": "plasma membrane ; FMN binding ; lactate dehydrogenase activity ; lactate oxidation" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MSQQPIRYEFIKACKQTGARLGRVHTPHGSFETPVFMPVGTLATVKTMSPEELKEMGADIILSNTYHLWLRPGHDIVKEAGGLHQFMNWNRAILTDSGGFQVFSLSEFRKIEEEGVHFRNHLNGDKLFLSPEKAMEIQNALGSDIMMAFDECPPYPAEYDYMKKSVERTSRWAERCLKAHNRPDEQGLFGIVQGGEYENLRKQSAKDLISLDFPGYAIGGLSVGEPKDVMNRVLEFTTPLLPADKPRYLMGVGSPDSLIDGAIRGVDMFDCVLPTRIARNGTLMTSEGRLVVKNAKYERDFRPIDEQCDCYTCRNYSRAYIRHLIRCNETFGIRLTSYHNLYFLLKLMGQVRDAIREDRLGDFREEFFERYGFNKPNAKSF", - "output": "metal ion binding ; queuine tRNA-ribosyltransferase activity ; queuosine biosynthetic process ; tRNA-guanine transglycosylation" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MSEQNNTEMTFQIQRIYTKDISFEAPNAPHVFQKDWQPEVKLDLDTASSQLADDVYEVVLRVTVTASLGEETAFLCEVQQGGIFSIAGIEGTQMAHCLGAYCPNILFPYARECITSMVSRGTFPQLNLAPVNFDALFMNYLQQQAGEGTEEHQDA", - "output": "cytoplasm ; unfolded protein binding ; protein folding ; protein tetramerization ; protein transport" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MNLQEEIKKRRTFAIISHPDAGKTTITEQLLYFGGEIREAGTVKGKKTGNFAKSDWMDIEKQRGISVTSSVMQFDYAGKRVNILDTPGHEDFSEDTYRTLMAVDAAVMVVDSAKGIEAQTKKLFEVVKHRGIPIFTFINKLDRDGREPLDLLEELEEVLGIASYPMNWPIGMGRSFEGLYDLYNQRLELYKGDERFASIEDGDKLFANNPFYEQAKEDIELLTEAGNEFSEEAILKGELTPVFFGSALTNFGVQTFLDSFLAFAPEPHGHKTTDDKVIDPLDKDFSGFVFKIQANMDPRHRDRIAFVRIVSGEFERGMSVNLARTGKSVKLSNVTQFMAESRENVENAVAGDIIGVYDTGTYQVGDTLTVGKNKFEFEPLPTFTPELFMKVSAKNVMKQKSFHKGIEQLVQEGAIQLYTNYQTGEYMLGAVGQLQFEVFKHRMENEYNAEVIMTPMGKKTVRWIKEEDLDERMSSSRNILAKDRFNKPVFLFENDFSLHWFADKYPDIVLEEKM", - "output": "cytoplasm ; GTP binding ; GTPase activity ; translation release factor activity, codon specific ; regulation of translational termination" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MGNCCWTQCFGLLRKEAGRLQRVGGGGGSKYFRTCSRGEHLTIEFENLVESDEGESPGSSHRPLTEEEIVDLRERHYDSIAEKQKDLDKKIQKELALQEEKLRLEEEALYAAQREAARAAKQRKLLEQERQRIVQQYHPSNNGEYQSSGPEDDFESCLRNMKSQYEVFRSSRLSSDATVLTPNTESSCDLMTKTKSTSGNDDSTSLDLEWEDEEGMNRMLPMRERSKTEEDILRAALKYSNKKTGSNPTSASDDSNGLEWENDFVSAEMDDNGNSEYSGFVNPVLELSDSGIRHSDTDQQTR", - "output": "cytosol ; early endosome ; endosome ; Golgi apparatus ; late endosome ; transport vesicle ; AP-1 adaptor complex binding ; kinesin binding ; negative regulation of cell motility ; negative regulation of receptor recycling ; negative regulation of substrate adhesion-dependent cell spreading ; protein transport ; regulation of Arp2/3 complex-mediated actin nucleation ; substrate adhesion-dependent cell spreading ; vesicle targeting, trans-Golgi to endosome" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MKLLKLTLISTALFSTAALAQAQQSVNVYSYDSFTSEWGAGPKVKQDFEKAHPQCAINFTPFESVGVLLNRVRLEGKKTKADIVLGLDNFFLEQAEKTGIFAPNNVDLTQLDLPTKWANKTFLPFDFGNYAFVYDKTKLQNPPKSLKELVERQDLSVIYQDPRTSSVGRGLLVWMNAVYPADKIQSAWKELDKHTVTVGKGWSDTYGAFLKGEADLVLSYSTSPLYHQLFEKKDNYAATDFAEGHITQVELAARVANHPNQCADDFMAFLISPTAQKHIVTANIMLPVIQGEIEPHFDALKVQQKTQTSINPMVNTEQLKNWISTWQTTLTK", - "output": "outer membrane-bounded periplasmic space ; thiamine binding ; thiamine pyrophosphate binding ; thiamine transport ; transmembrane transport" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MIERGKFRSLTLINWNGFFARTFDLDELVTTLSGGNGAGKSTTMAAFVTALIPDLTLLHFRNTTEAGATSGSRDKGLHGKLKAGVCYSMLDTINSRHQRVVVGVRLQQVAGRDRKVDIKPFAIQGLPMSVQPTQLVTETLNERQARVLSLAELKDKLDEMEGVQFKQFNSITDYHSLMFDLGIIARRLRSASDRSKFYRLIEASLYGGISSAITRSLRDYLLPENSGVRKAFQDMEAALRENRLTLEAIRVTQSDRDLFKHLISEATDYVAADYMRHANERRVHLDQALAFRRELYTSRKQLAAEQYKHVDMARELGEHNGAEGSLEADYQAASDHLNLVQTALRQQEKIERYEADLEELQIRFEEQNEVVAEAAEMQDENEARAEAAELEVDELKSQLADYQQALDVQQTRAIQYNQAISALARAKELCHLPDLTPESAAEWLDTFQAKEQEATEKLLSLEQKMSVAQTAHSQFEQAYQLVAAINGPLARSEAWDVARELLRDGVNQRHLAEQVQPLRMRLSELEQRLREQQEAERLLAEFCKRQGKNFDIDELEALHQELEARIASLSESVSSASEQRMALRQEQEQLQSRIQHLMQRAPVWLAAQNSLNQLSEQCGEEFTSSQEVTEYLQQLLEREREAIVERDEVGARKNAVDEEIERLSQPGGAEDQRLNALAERFGGVLLSEIYDDVSLEDAPYFSALYGPSRHAIVVPDLSQIAEQLEGLTDCPEDLYLIEGDPQSFDDSVFSVDELEKAVVVKIADRQWRYSRFPSLPIFGRAARENRIESLHAEREVLSERFATLSFDVQKTQRLHQAFSRFIGSHLSVAFEDDPEAEIRRLNGRRVELERALATHESDNQQQRLQFEQAKEGVSALNRLLPRLNLLADETLADRVDEIQERLDEAQEAARFVQQYGNQLAKLEPMVSVLQSDPEQFEQLKEDYAWSQQMQRDARQQAFALAEVVERRAHFSYSDSAEMLSGNSDLNEKLRQRLEQAEAERTRAREALRSHAAQLSQYSQVLASLKSSYDTKKELLNDLQRELQDIGVRADSGAEERARQRRDELHAQLSNNRSRRNQLEKALTFCEAEMENLTRKLRKLERDYHEMREQVVTAKAGWCAVMRMVKDNGVERRLHRRELAYLSADELRSMSDKALGALRLAVADNEHLRDVLRLSEDPKRPERKIQFFVAVYQHLRERIRQDIIRTDDPVEAIEQMEIELSRLTEELTSREQKLAISSRSVANIIRKTIQREQNRIRMLNQGLQSVSFGQVNSVRLNVNVRETHATLLDVLSEQQEQHQDLFNSNRLTFSEALAKLYQRLNPQIDMGQRTPQTIGEELLDYRNYLEMEVEVNRGSDGWLRAESGALSTGEAIGTGMSILVMVVQSWEDEARRLRGKDISPCRLLFLDEAARLDARSIATLFELCERLQMQLIIAAPENISPEKGTTYKLVRKVFQNTEHVHVVGLRGFAPQLPETLPGTQAEDTPSEAS", - "output": "cytoplasm ; nucleoid ; ATP binding ; DNA binding ; cell division ; chromosome condensation ; chromosome segregation ; DNA replication" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MSKVLEQKQQVVAEVAAKLRDSKSTVIVDYRGLNVAQVTELRKQLREAGVEYKVYKNTLVRRATAEAGLTGLDEHLVGPTAIAFGVDDVIAPAKVLNEFAKNNEALTIKTGVIEGNISTADEVKALAELPSREGLLSMLANVLQAPVRQFALAAKAVAEQKEEQGA", - "output": "large ribosomal subunit ; large ribosomal subunit rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MPLSSQPSSSNLKRKQPTISSFFTKKPQLSQESISNDVLEKEERDEEREEVAKQEEGLRENGGTRSNNVDDDEDDVVAPASKRARTNGSHSQNTIETPKEKHVERPLPSDSIQKTELSKFASSPATEGETKERTKERERLHQKFVRRLGGPDCLIGIGRNTAPEAVPEEVGEGDEDDEPSPPPAAKGKATAKKGARKLTPMEKQVIDIKRKHMDTVLVVEVGYKFRFFGEDARTAAKELNIVCIPGKFRFDEHPSEAHLDRFASASIPVHRLHVHVKRLVSAGHKVGVVRQMETAALKAAGDNRNAPFGRKLTNLYTKGTYIDDMEGLEGSTASMSATGTSMATGYMLCITETNTKGWGNDEKVLVGIVAVQPATGDIVYDEFEDGFMRSEIETRLLHLAPCEVLIVGDLSKATEKLVQHLSGNKTNAFGDEIRVERAPKAKTAAAESHSHVSSFYAERMKKVNATNDVQASSLLQKVLNLSEQATICLSSMIKHMSEYGLEHVFQLTKYFQHFSSRSHMLLNANTLNSLEIYHNQTDHSTKGSLFWTLDRTQTRFGQRMLRKWVGRPLLNKLGLEERVDAVEELKNLERVALVEQMKCLLGRIKTDLEKSLIRVYYGKCTRPELLTLLQTLQMIAQEFAGVQSPADTGFSSPLISKAVASLPTILEDVVRFLDKINMHAAKNDDKYEFFRESEETDEITEHKLGIGAVEHDLEEHRSTAGEILGKRKVDYVTVAGIEYLIAVENKSPSIKKVPASWVKISGTKAVSRFHTPEVIRLLRQRDQHKEALAAGCDKAYATFLAEISASYQSFRDSVQSLATLDCLISLATIANQPGYVKPEYTNHTCIQVDQGRHPMVEQLLLDSYVPNDIDLDSDKTRALLVTGPNMGGKSSYVRQVALIAIMGQIGSYVPARSAKLGMLDAVFTRMGAFDNMLAGESTFMVELSETADILKQATPRSLVILDELGRGTSTHDGVAIAQAVLDYMIRSIRSLTLFITHYQHLSSMVHSFPDHELRNVHMRFTESGPTEEEITFLYEVREGVAHRSYGLNVARLANLPAPLIELAKQKSAELEQKIHRRRLAGLVRTVGDILADSAKADESLIERLISSAEQL", - "output": "nucleus ; ATP binding ; ATP-dependent DNA damage sensor activity ; mismatched DNA binding ; mismatch repair" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MTNIPKSHPLVKIVNESFIDLPAPSNISAWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGMYYGSYTFLETWNIGILLLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFILPFIISALAVVHLLFLHETGSNNPSGLTSDSDKIPFHPYYMIKDILGILLLILMLLLLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILAIIPLLHTSKQRSMMFRPFSQCLFWLLVADLLILTWIGGQPVEYPFITIGQLASILYFSILLILMPISSIIENHFLKW", - "output": "mitochondrial inner membrane ; respiratory chain complex III ; metal ion binding ; ubiquinol-cytochrome-c reductase activity ; respiratory electron transport chain" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MEFSVKSGSPEKQRSACIVVGVFEPRRLSPIAEQLDKISDGYISALLRRGELEGKPGQTLLLHHVPNVLSERILLIGCGKERELDERQYKQVIQKTINTLNDTGSMEAVCFLTELHVKGRNNYWKVRQAVETAKETLYSFDQLKTNKSEPRRPLRKMVFNVPTRRELTSGERAIQHGLAIAAGIKAAKDLGNMPPNICNAAYLASQARQLADSYSKNVITRVIGEQQMRELGMNAYLAVGHGSQNESLMSVIEYKGNPSEDARPIVLVGKGLTFDSGGISIKPSEGMDEMKYDMCGAAAVYGVMRMVAELQLPINVIGVLAGCENMPGGRAYRPGDVLTTMSGQTVEVLNTDAEGRLVLCDVLTYVERFEPEAVIDVATLTGACVIALGHHITGLMSNHNPLAHELIGASEQAGDRAWRLPLGDEFQEQLESNFADMANIGGRPGGAITAGCFLSRFTRKYNWAHLDIAGTAWRSGKAKGATGRPVALLSQFLLNRAGFNGEE", - "output": "cytoplasm ; manganese ion binding ; metalloaminopeptidase activity ; proteolysis" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MQRSPIEKANAFSKLFFRWPRPILKKGYRQKLELSDIYQIPSSDSADELSEMLEREWDRELATSKKNPKLVNALRRCFFWRFLFYGILLYFVEFTKAVQPLCLGRIIASYNAKNTYEREIAYYLALGLCLLFVVRTLFLHPAVFGLQHLGMQMRIALFSLIYKKILKMSSRVLDKIDTGQLVSLLSNNLNKFDEGVAVAHFVWIAPVQVVLLMGLIWNELTEFVFCGLGFLIMLALFQAWLGKKMMQYRDKRAGKINERLAITSEIIDNIQSVKVYCWEDAMEKIIDDIRQVELKLTRKVAYCRYFSSSAFFFSGFFVVFLSVVPYAFIHTIKLRRIFTTISYNIVLRMTVTRQFPSAIQTWYDSLGAIRKIQDFLHKDEHKTVEYNLTTKEVEMVNVTASWDEGIGELFEKVKQNDSERKMANGDDGLFFSNFSLHVTPVLKNISFKLEKGELLAIAGSTGSGKSSLLMMIMGELEPSDGKIKHSGRISYSPQVPWIMPGTIKDNIIFGLSYDEYRYTSVVNACQLEEDITVFPNKDKTVLGDGGITLSGGQRARISLARALYKDADLYLLDSPFSHLDVTTEKDIFESCLCKLMVNKTRILVTSKLEHLKKADKILLLHEGHCYFYGTFSELQGEKPDFSSQLLGSVHFDSFSAERRNSILTETFRRCSVSSGDGAGLGSYSETRKASFKQPPPEFNEKRKSSLIVNPITSNKKFSLVQTAMSYPQTNGMEDATSEPGERHFSLIPENELGEPTKPRSNIFKSELPFQAHRRQSVLALMTHSSTSPNKIHARRSAVRKMSMLSQTNFASSEIDIYSRRLSEDGSFEISEEINEEDLKECFADEEEIQNVTTTWSTYLRYVTTNRNLVFVLILCLVIFLAEVAASLAGLWIISGLAINTGSQTNDTSTDLSHLSVFSKFITNGSHYYIFYIYVGLADSFLALGVIRGLPLVHTLVTVSKDLHKQMLHSVLQGPMTAFNKMKAGRILNRFIKDTAIIDDMLPLTVFDFVQLILIVVGAICVVSVLQPYTLLAAIPVAVIFIMLRAYFLRTSQQLKQLESEARSPIFSHLITSLRGLWTVRAFGRQSYFETLFHKALNLHTANWFLYLSTLRWFQMRIDIVFVLFFIAVTFIAIATHDVGEGQVGIILTLAMNITSTLQWAVNSSIDVDGLMRSVSRVFKYIDIPPEGSETKNRHNANNPSDVLVIENKHLTKEWPSGGQMMVNNLTAKYTSDGRAVLQDLSFSVNAGQRVGLLGRTGAGKSTLLSALLRLLSTEGEIQIDGISWNSVSLQKWRKAFGVIPQKVFVFSGTFRKNLDPYEQWSDEEIWKVTEEVGLKSMIEQFPDKLNFVLVDGGYILSNGHKQLMCLARSILSKAKILLLDEPTAHLDPVTFQIIRKTLKHTFSNCTVILSEHRVEALLECQQFLVIEGCSVKQFDALQKLLTEASLFKQVFGHLDRAKLFTAHRRNSSKRKTRPKISALQEEAEEDLQETRL", - "output": "apical plasma membrane ; chloride channel complex ; early endosome membrane ; endoplasmic reticulum membrane ; membrane ; plasma membrane ; recycling endosome membrane ; ABC-type transporter activity ; ATP binding ; ATP hydrolysis activity ; bicarbonate transmembrane transporter activity ; chloride channel activity ; chloride transmembrane transporter activity ; intracellularly ATP-gated chloride channel activity ; isomerase activity ; bicarbonate transport ; cellular response to cAMP ; cellular response to forskolin ; chloride transmembrane transport ; intracellular pH elevation ; membrane hyperpolarization ; multicellular organismal-level water homeostasis ; sperm capacitation ; transepithelial water transport" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MDKLTPSQWKVINKSYEPASTIKVIAGPGSGKTLTLLYKVLHLITVENIKPEEILIFSLTNKAVDSIIENLLSIFENSHTNKEIVHQIGCYTVHGLANRIVVENEGMINIIEEIGWRGLMKLLPPSKRTPHHFRSYKELEKVVKDYKLNNAKNNNPVIEKLVELMDNCKVMTNDDLIIRAKKYLELDSSDSDASSFTQDLRNKYKVVLIDEFQDLYPSLAPLITMICKGKQLIMFGDTNQSIYGFLGSNNEIMSQLDNLHPKNSTTVLKLFDNFRSTPEIISLASKIINRPLAEKQIIDDTDETPSELVRKLPSGVSPQIMTFDDLAAESEFIIDKITQLICSSAKFSDIAILSRTNSHLTAIASILKKYGIPYQKLKSQPDWMDDLRIQFLLDILKVCSLASDEKHNREFNTGDKWQSNFSILVTMSALKGIGDASIQALYKACSLKNLSIWKYLTMVPNFEWPLGLSIKKKMENYTSNLYEMIENDQVHQLDDPMELLEKVASITNNLNLNPTYFQSLSDAQSSLEFKTHLQEMAQVMKVSKSNKPPGISFVKWFLETYFDQTMVFHQSQQALQTTGPGTVKLSTIHSAKGLEFPIVFLTNGSMSNFPMDTNALYVGITRARNLLYMCNMKHERLVSKSSPYSRNIMSNNLFWTYYNKDLKRSVCDVKVTHGYNVQRYNQLRKNFGFYRAYSSLRGCKSVFRRI", - "output": "mitochondrial inner membrane ; mitochondrial matrix ; mitochondrion ; nucleus ; 3'-5' DNA helicase activity ; ATP binding ; ATP hydrolysis activity ; DNA binding ; isomerase activity ; mitochondrial DNA metabolic process ; mitochondrial genome maintenance ; recombinational repair" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MIVGLGIDLAEIDRFEKAQEKNSRFAEKVLTATEFELFSHYTGRRALEFLAGRFAVKEAFSKAYGTGIGQVKLQAVETLNDPQGKPYIKQDLFDGVVHVSLSHTATLVIAEVILERG", - "output": "cytoplasm ; holo- synthase activity ; magnesium ion binding ; fatty acid biosynthetic process" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MAKGFKLKELLSHQKEIEKAEKLENDLKKKKSQELKKEEPTIVTASNLKKLEKKEKKADVKKEVAADTEEYQSQALSKKEKRKLKKELKKMQEQDATEAQKHMSGDEDESGDDREEEEEEEEEEEGRLDLEKLAKSDSESEDDSESENDSEEDEDVVAKEESEEKEEQEEEQDVPLSDVEFDSDADVVPHHKLTVNNTKAMKHALERVQLPWKKHSFQEHQSVTSETNTDEHIKDIYDDTERELAFYKQSLDAVLVARDELKRLKVPFKRPLDYFAEMVKSDEHMDKIKGKLIEEASDKKAREEARRQRQLKKFGKQVQNATLQKRQLEKRETLEKIKSLKNKRKHNEIDHSEFNVGVEEEVEGKRFDRGRPNGKRAAKNAKYGQGGMKRFKRKNDATSSADVSGFSSRKMKGKTNRPGKSRRARRF", - "output": "nuclear periphery ; nucleolus ; preribosome, large subunit precursor ; identical protein binding ; mRNA binding ; nuclear division ; ribosomal large subunit biogenesis ; rRNA processing" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MRYITAGESHGPQLTTILEGIPAGLPLVADDINAELARRQKGYGRGRRMQIEKDQVQIVSGVRHGQTIGAPIALIVENKDFAHWTKIMGAAPLTEQEKKEMKRQITRPRPGHADLNGAIKYGHRDMRNVLERSSARETTVRVAAGAVAKKVLAELGIKVAGHVIEIGGVRAEQTTYETIEQLQEITEASPVRCLDGEAGKKMMQAIDDAKASGDSIGGIVEVIVEGMPIGVGSYVHYDRKLDAKLAAAVMSINAFKGVEIGIGFEAAHRPGSQVHDEILWNEEEGYTRRTNHAGGLEGGMTTGMPVVVRGVMKPIPTLYKPLQSVDIETKESFSASIERSDSCAVPAASVVAEAVVAWELATALVEQFGADRMDCIRENIERHNEYAREF", - "output": "chorismate synthase activity ; amino acid biosynthetic process ; aromatic amino acid family biosynthetic process ; chorismate biosynthetic process" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MEEGERSPLLSQETAGQKPLSVHRPPTSGCLGPVPREDQAEAWGCSCCPPETKHQALSGTPKKGPAPSLSPGSSCVKYLIFLSNFPFSLLGLLALAIGLWGLAVKGSLGSDLGGPLPTDPMLGLALGGLVVSAASLAGCLGALCENTCLLRGFSGGILAFLVLEAVAGALVVALWGPLQDSLEHTLRVAIAHYQDDPDLRFLLDQVQLGLRCCGAASYQDWQQNLYFNCSSPGVQACSLPASCCIDPREDGASVNDQCGFGVLRLDADAAQRVVYLEGCGPPLRRWLRANLAASGGYAIAVVLLQGAELLLAARLLGALAARSGAAYGPGAHGEDRAGPQSPSPGAPPAAKPARG", - "output": "membrane ; enzyme binding ; establishment of protein localization to organelle" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MARIAGVDIPRDKRVVISLTYVFGIGRTTAQQVLKEAGVSEDTRVRDLTEEELGKIRDVIDKLKVEGDLRREVSLNIKRLIEIGSYRGIRHRRGLPVRGQNSKNNARTRKGPRRTVANKKK", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; tRNA binding ; translation" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MTLSGSGSASDMSGQTVLSADDADIDVVGEGDEALDKDSECESTAGHTDEVGELGGKEIPRSPSGSGTEAEGKGESQQQQQEGIQNKPKNSLVKPPYSYIALITMSILQSPQKKLTLSGICEFISNRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPQSEDMFDNGSFLRRRKRFKRQQQDSLREQTALMMQSFGAYSLASPYGRHYGLHPAAYTHPAALQYPYIPPVGHMLPPAVPLLPSSELTRKAFSSQLSPSLQLQLSSLSSTAASIIKSEPSSRPSFSIENIIGVSAASSAAPHTFLRPPVTVQSALMSHQPLALSRSTAAIGPILSVPTNLISGQFLPTAAAAVAKWPAQ", - "output": "nucleus ; DNA binding ; DNA-binding transcription factor activity ; sequence-specific DNA binding ; mesoderm formation ; negative regulation of DNA-templated transcription ; negative regulation of neurogenesis ; nervous system development ; neural crest cell fate commitment ; positive regulation of neurogenesis" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MPLYEFTFIAQQGLTQYELEGLVKGLSSLLTKNGAELLKYEYWGLLDFAYTIDKMNKGHYCMIYIKATPSSMDEFKRKVRLNEDILRFLCLKKDKLPKGDSLMIQASQV", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MASKESKPSRTTRRGMEPPLRETWNQVLQELVKRQQQEEEEQQGLVSGKKKSWVSIDLLGTEGKDIKKVNIWEPCEKWFAQVVWGVLWVLQIVLWGCLMWEVRKGNQCQAEEVIALVSDPGGFQRVQHVETVPVTCVTKNFTQWGCQPEGAYPDPELEYRNISREILEEVYKQDWPWNTYHWPLWQMENMRQWMKENEKEYKERTNKTKEDIDDLVAGRIRGRFCVPYPYALLRCEEWCWYPESINQETGHAEKIKINCTKAKAVSCTEKMSLAAVQRVYWEKEDEESMKFLNIKACNISLRCQDEGKSPGGCVQGYPIPKGAEIIPEAMKYLRGKKSRYGGIKDKNGELKLPLSVRVWVRMANLSGWVNGTPPYWSARINGSTGINGTRWYGIGTLHHLGCNISSNPERGICNFTGELWIGGDKFPYYYTPSWNCSQNWTGHPVWHVFRYLDMTEHMTSRCIQRPKRHNITVGNGTITGNCSVTNWDGCNCTRSGNHLYNSTSGGLLVIICRQNSTITGIMGTNTNWTTMWNIYQNCSRCNNSSLDRTGSGTLGTVNNLKCSLPHRNESNKWTCKSQRDSYIAGRDFWGKVKAKYSCESNLGGLDSMMHQQMLLQRYQVIRVRAYTYGVVEMPQSYMEAQGENKRSRRNLQRKKRGIGLVIVLAIMAIIAAAGAGLGVANAVQQSYTRTAVQSLANATAAQQEVLEASYAMVQHIAKGIRILEARVARVEALVDRMMVYQELDCWHYQHYCVTSTRSEVANYVNWTRFKDNCTWQQWEEEIEQHEGNLSLLLREAALQVHIAQRDARRIPDAWKAIQEAFNWSSWFSWLKYIPWIIMGIVGLMCFRILMCVISMCLQAYKQVKQIRYTQVTVVIEAPVELEEKQKRNGDGTNGCASLERERRTSHRSFIQIWRATWWAWKTSPWRHNWRTMPYITLLPILVIWQWMEENGWNGENQHKKKKERVDCQDREQMPTLENDYVEL", - "output": "host cell plasma membrane ; membrane ; viral envelope ; virion membrane ; viral entry into host cell ; virion attachment to host cell" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MIKAFLIERRSWIAAFLFQQALMLFIAFVDPSISFGNVLYMVYLCILFFIIFLWFRYRKETAFYKSLKTWENNLDVTAINEPETPFEAMVERSIAGQTEHLKQTAARHRLALENEKDELMAWIHEVKTPLTAMHLIIDRMEEKALKSQLSYEWLRIHLLLDQQLHQKRISFIENDLSVEFIQLQPLIFKEIKDLQSWCIQKGIGFDIQLEAKEVLSDAKWLAFIIRQLLTNAVKYSEASEIEIKSFQKGEQTQLQVKDCGRGIDPKDVPRIFDKGFTSTTDHHDQASTGMGLYLAKKAAAPLLIHIDVESEFGAGTVFTLTFPIRNQFEHVISV", - "output": "plasma membrane ; ATP binding ; protein histidine kinase activity ; phosphorelay signal transduction system" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MAPLKMLALVILLLGASLQHIHAARGTNVGRECCLKYFKGAIPLRKLKTWYQTSEDCSRDAIVFVTVQNKAICSDPNDKKVKKALKYLQSLERS", - "output": "extracellular space ; CCR chemokine receptor binding ; chemokine activity ; cellular response to interleukin-1 ; cellular response to tumor necrosis factor ; cellular response to type II interferon ; chemokine-mediated signaling pathway ; G protein-coupled receptor signaling pathway ; inflammatory response ; lymphocyte chemotaxis ; monocyte chemotaxis ; neutrophil chemotaxis ; positive regulation of ERK1 and ERK2 cascade ; positive regulation of GTPase activity" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MATSAIEQSAFAGQTALKSQNELVRKIGSFNGGRATMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAVWASQVVLMGLIEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANNAWAYATNFVPGK", - "output": "chloroplast thylakoid membrane ; photosystem I ; photosystem II ; chlorophyll binding ; metal ion binding ; photosynthesis, light harvesting in photosystem I ; response to light stimulus" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MRLSRYFLPVLKENPSEAQIVSHRYMLRAGMIKQQAAGIYSWLPLGFKVLKRIEQIVHEEQIRAGHIPLLMPTLQPADLWRESGRYDDYGEEMLRITDRHKRDMLYGPTNEEMITDIFRSHVSSYKDLPLTLYHIQWKFRDEIRPRFGVMRGREFLMKDGYNFDLDYESAIHAYNRHMVSYLRTYERMGLQAIPMRAASGPIGGDNTHEFLVLASTGESEVFYDAAITDLKFGDRVVNYDDRAECEAIVKEWTAPYARTDETHDEAVFGQIPEERRRSSRGIEVGQIFYFGTKYSEPMGATVVTADGSRVPVHMGSHGIGVSRLLGAIIEASHDDKGIIWPEGVTPFHAGIVNLKQGDSSTDLACEALYRDLSARGLEPLYDDRDERAGAKFATMDLIGLPWRITVGPRGISAGKVELTNRRTGESEEMSSGAAVDRLAQIYAGI", - "output": "cytoplasm ; ATP binding ; proline-tRNA ligase activity ; prolyl-tRNA aminoacylation" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MDKKTARLSRSKRTRIKLRELGHTRLCVYRTPRHVYAQVISGDGSTVLVAASTVEKDVKAKCKYTGNVESAAIVGEIIADRCKEKGISQVAFDRSGYKYHGRVKALVEAAREHGLQF", - "output": "cytoplasm ; ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MAQQRRGGFKRRKKVDYIAANKIEYVDYKDTELLSRFVSERGKILPRRVTGTSAKNQRKVTTAIKRARVMALMPYVNED", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MFTPVEAKKSNLITVGRITGVFGIKGWVKLKSFTDPQDNVLEYSPLLLKTKHGVKECEIAEYQFRPQGLVVRLKGVDDRNAAEALAPVDVAIDKSLLPELDDDDFYWHQLEGLRVVTIYEGNTQDLGVVSKVMATGANDVLEVKPDAQSIDDRDRLVPYVLDLYVKKVDLSAECITVDWDPEF", - "output": "cytoplasm ; ribosome ; ribosome binding ; ribosomal small subunit biogenesis ; rRNA processing" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MHWGMEMNVEQAIEYVKKNNVKFIRFQFVDILGFPKNVAYPVKAGEKGIEELREIFENGVWFDGSSITGFVGIEESDMLLKPDLSTLSVLPWRPEEKSVARVICDVYKDEKTPFEGDPRSRLKAILEELKKEMNGEYFVGPEPEFFLLKRDPHNPHRWVPADDGGYFDVEPLDDAPDIRRDIVLALENLGFHVEASHHEVAPGQHEVDFKFDNALKTADSVITFKMTIKNIAKKHGLKATFMPKPFFGMNGNGMHCHQSVWFNGEPSFYDPEGPYNGLSETCLSYIAGILSHAKALVAITNPTVNSYKRLVPGYEAPVNIAWANKNRSAIIRVPAARGKATRIEFRAPDPTCNPYLAFACMLAAGLDGIKKKMTAPEPVERNIFKMSEEEKKQLGIESVPANLAAALDELECDEVLQKALGKHIYENYMEIKRAEWDDFRTAVTDWETGKYLIY", - "output": "cytoplasm ; ATP binding ; glutamate-ammonia ligase activity ; metal ion binding ; glutamine biosynthetic process" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MSRVFKKTCSNGKLSIYLGKRDFVDHVDMVEPIDGVVLVDPEYLKGRKMFVMLTCAFRYGHDDLDVIGLTFRKDLYVQVQQVVPAESSSPRGSLTVLQERLLHKLGDNAYPFTLQMVVNLPCSVTLQPGPDDTGKACGVDFEVKSFCAENLEEKVSKRDSVRLVIRKIQFAPLEPGPGPWARLCRRFLLSAQPLLLQAWMDKEVNYHGQPISVNVSINNSTNKVIKKIKISVDQITDVVLYSLDKYTKTVFVQEFTETIAANSTFSKSFAVTPLLADNCHKQGLALDGKLKQGDTNLASSTILRPGVDKELLGILVSYKVRVNLMVSCEGILGDLTASEVGVELPLILMHPKPSNEAASSEDIVIEEFAQQEPSGESQEALAAEGNEGS", - "output": "photoreceptor inner segment ; photoreceptor outer segment ; G protein-coupled receptor binding ; G protein-coupled receptor internalization ; signal transduction ; visual perception" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MTKKLHIKTWGCQMNEYDSSKMADLLDATHGYQLTDVAEEADVLLLNTCSIREKAQEKVFHQLGRWKLLKEKNPDLIIGVGGCVASQEGEHIRQRAHYVDIIFGPQTLHRLPEMINSVRGDRSPVVDISFPEIEKFDRLPEPRAEGPTAFVSIMEGCNKYCTYCVVPYTRGEEVSRPSDDILFEIAQLAAQGVREVNLLGQNVNAWRGENYDGTTGSFADLLRLVAAIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSFLHLPVQSGSDRILNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTEDFEKTMKLIADVNFDMSYSFIFSARPGTPAADMVDDVPEEEKKQRLYILQERINQQAMAWSRRMLGTTQRILVEGTSRKSIMELSGRTENNRVVNFEGTPDMIGKFVDVEITDVYPNSLRGKVVRTEDEMGLRVAETPESVIARTRKENDLGVGYYQP", - "output": "cytoplasm ; 4 iron, 4 sulfur cluster binding ; metal ion binding ; methylthiotransferase activity ; tRNA modification" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MLSSGDLTSASWELVVRVDHANGEQQTEITLRVSGDLHIGGVMLKLVEQMNIAQDWSDYALWWEQKRCWLLKTHWTLDKCGVQADANLLFTPQHKMLRLRLPNAKTVRLRVSFSAVVFKAVADICKVLNIRRPEELSLLKPSSDYCKKKKKKEKNSKEPVIEDILNLESSSTSSGSPVSPGLYSKTMTPTYDPINGTPALSTMTWFGDSPLTEQNCSVLAFSQPPPSPDVLADMFQPRSLVDKAKMNAGWLDSSRSLMEQSIQEDEQLQLRFKYYTFFDLNPKYDAVRINQLYEQARWAVLLEEIDCTEEEMLIFAALQYHISKLSQCAEIQDFATKSEVDEVEAALSSLEVTLEGGKADNTLEDITDIPKLADYLKLFRPKKLMLKACKQYWFVFKDTSIAYFKNKELEQGEPIEKLNLRGCEIVPDVNVSGRKFGIKLLIPVADGMNEVYLRCDHEDQYARWMAACILASKGKTMADSSYQPEVISILSFLKMKNRNSSPLVASSLENMDMNPECLVSPCCAKKHKSKQLAARILEAHHNVAQMPLVEAKLQFIQAWQSLPEFGLTYYLVRFKGSKKDDILGVAYNRLIRIDAVTGIPVTTWRFANMKQWNVNWEIRQVAIEFDQNVSIAFTCLSADCKIVHEYIGGYIFLSTRSKDQNETLDEDLFHKLTGGQD", - "output": "cell junction ; cell periphery ; cytoplasm ; cytoskeleton ; cytosol ; focal adhesion ; ruffle membrane ; actin filament binding ; integrin binding ; basement membrane organization ; cell adhesion ; cell-matrix adhesion ; establishment of epithelial cell polarity ; integrin-mediated signaling pathway ; keratinocyte migration ; keratinocyte proliferation ; negative regulation of canonical Wnt signaling pathway ; negative regulation of gene expression ; negative regulation of protein import into nucleus ; negative regulation of stem cell proliferation ; negative regulation of timing of anagen ; positive regulation of cell adhesion mediated by integrin ; positive regulation of cell-matrix adhesion ; positive regulation of integrin activation ; positive regulation of transforming growth factor beta production ; positive regulation of transforming growth factor beta receptor signaling pathway ; positive regulation of wound healing, spreading of epidermal cells" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MAVAAAAAAAGPAGAGGGRAQRSGLLEVLVRDRWHKVLVNLSEDALVLSSEEGAAAYNGIGTATNGSFCRGAGAGHPGAGGAQPPDSPAGVRTAFTDLPEQVPESISNQKRGVKVLKQELGGLGISIKGGKENKMPILISKIFKGLAADQTQALYVGDAILSVNGADLRDATHDEAVQALKRAGKEVLLEVKYMREATPYVKKGSPVSEIGWETPPPESPRLGGSTSDPPSSQSFSFHRDRKSIPLKMCYVTRSMALADPENRQLEIHSPDAKHTVILRSKDSATAQAWFSAIHSNVNDLLTRVIAEVREQLGKTGIAGSREIRHLGWLAEKVPGESKKQWKPALVVLTEKDLLIYDSMPRRKEAWFSPVHTYPLLATRLVHSGPGKGSPQAGVDLSFATRTGTRQGIETHLFRAETSRDLSHWTRSIVQGCHNSAELIAEISTACTYKNQECRLTIHYENGFSITTEPQEGAFPKTIIQSPYEKLKMSSDDGIRMLYLDFGGKDGEIQLDLHSCPKPIVFIIHSFLSAKITRLGLVA", - "output": "cytoplasm ; cytoskeleton ; dystrophin-associated glycoprotein complex ; focal adhesion ; protein-containing complex ; sarcolemma ; synapse ; actin binding ; calmodulin binding ; PDZ domain binding ; structural molecule activity ; muscle contraction" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MATATDRAPHQVQVHTPTTQRVDVQRRGYDVSGGGVKTFLPDRGPSTSQIIAVLVGVPTGGTLLLLSGLSLLGTIIGLAIATPVFTFFSPVIVPAVVTIGLAVIGILTAGACGLTGLMSLSWMINFIRQVHGTTVPDQLDSAKRRMADMADYVGQKTKDAGQEIQTKAQDVKRSSS", - "output": "membrane ; monolayer-surrounded lipid storage body ; post-embryonic development ; reproductive structure development" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MVKISDNSEIYDLIKDVTYLLGISIIEINTFRRRDEFKIQIVLYKSDNFSVDMLCDLHKMILLKLEAVLKYNVSLEISTPGINRKIKSDREFKIFEGKKIKLMLNNDFEEGFILRAERDGFIFKTEYKEVKILYSNVKKAKLS", - "output": "cytoplasm ; ribosomal small subunit biogenesis" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MVKIYPQVLSIAGSDSGGGSGIQADLKAFQTLGVFGTSVITCITAQNTQGVHGVYPLSVESVKAQILAIRDDFSIKAFKMGALCNAQIIECVADTLETCDFGLCVLDPVMVAKNGALLLEEEAILSLKKRLLPTTHLLTPNLPEVYALTGVQVRDDKSASKAMGVLRDLGVKNAVIKGGHTEHFQGEYSNDWVFLEDAEFILNAKRFNTKNTHGTGCTLSSLIVGLLAQGLDLKNAISKAKELLTIIIQNPLNIGHGHGPLNLWSIKELV", - "output": "cytosol ; ATP binding ; hydroxymethylpyrimidine kinase activity ; phosphomethylpyrimidine kinase activity ; phosphorylation ; thiamine biosynthetic process ; thiamine diphosphate biosynthetic process" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MTHIVTDTPLWKKLSDHHWEVVGTHLRELFDTDPDRGVDLIVTAADLYIDYSKHRVTRETMGLLVDLARAAGVERHREAMFTGAHINTSEDRAVLHTALRANPERELIVDGQDVVGDVHTVLRRMGEFTDRVRSGAWRGATGERIRTVVNIGIGGSDLGPAMAYRALRHYVDGPEVRFVSNIDPADLLSNLTDLDPRTTLFVVVSKTFSTLETMTNASAARRWITEALGEHAVPRHFVAVSTDEERVTAFGITARNIFGFWEWVGGRYSVGSAAGLSVMIAIGRERFTEFLGGMRAIDEHFRTTPLESNAPVILGMLGVWYSSFFGADARAVLPYAHDLARFPAYLQQLTMESNGKSVRTDGTPVGTFTGEIFWGEPGTNGQHAFHQLLHQGTHLIPVDFLGFAEPIEDLPTLDGIGSVHDVLTANLFAQSKVLAFGKNADEVAADGTPSALVPHKVMSGNRPSTTILGAKLTPSTLGQLIALYEHQVFVQGIVWGIDSFDQWGVELGKTSALELGPALWDLDGAAYVGDSSTTGLIRTYRLARGERRCLP", - "output": "cytoplasm ; carbohydrate derivative binding ; glucose-6-phosphate isomerase activity ; carbohydrate derivative metabolic process ; gluconeogenesis ; glycolytic process" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MNSAEIMADLSNHTPMMQQYLKVKKDYQHALLFYRMGDFYELFFEDAHLAAKLLGITLTHRGKANGNPIPMAGVPYHSAEGYLARLVKAGRTVAICEQVGEVTGKGPVERKVVRILTPGTLTDDALLTSYQSSNLVALCIHQNQIGFALLDLSAGIFKVQQQDYKPEQLPIELARLMPSEILIDEDLVDPNIIEQIKKHLDCPVTKRPNVDFNLNNAQKTLCDQFSVSTLSGFGLDPLPLAKAAAAALIHYAKETQKTALPHIRSILLEQSSDFIALDPITRRNLEIIEPLFEHGTSLFQLVNDCQTAMGGRLLSRTLMQPVRDTALLDARLDAIEQLIQGYHESPVRLVLKEIGDIERVLSRVALGSARPRDLVQLRHACAQIPFLRNALAPVVQAKKSKLLGQLDQELGDFKSLHQHLMAAIVENPPVLLRDGNVIAEGYDAELDELRQIRDHAGQFLIDLEIKERERTGISTLKIGYNRVSGYYIELTRAQAEQAPADYIRRQTLKNAERYITPELKSFEDKVLSSESRALAREKALFEALLENLRENIAHLQMMSSAIAQIDVIANFAHQARLNNWARPEFTPETGIKIQGGRHPVVEALSKAPFTPNDTFLDVQHRMAIITGPNMGGKSTFMRQTALISLLAYCGSYVPARAAKLGPIDRIFTRIGSADDLSTGKSTFMVEMTETSQILHHATNQSLVLMDEVGRGTSTYDGLSLAWACVVDLTKRVKCLCLFATHYFELTELGSEPGIDNYHVTAQELNGNLILLHKVQQGPASQSHGLQVAKLAGIPANVIKEAQKRLRILEKQQQQHLQTSVQSDLFATLDSEVTPSTQVIEKVIEVEVSSPALDLLKQIEVDNLTPRQALEQLYELKAALNS", - "output": "ATP binding ; ATP-dependent DNA damage sensor activity ; damaged DNA binding ; mismatched DNA binding ; mismatch repair" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MSNVPADLKYTDEHEWIRTEADGTLTVGITDHAQSTLGDIVFLELPAVGKSVSAGDAVGVVESVKAASDIYSPVSGEIIAINEEAADSPEEVNSDAYGVWLFKIKLADGASTDKLIDADAYGKLID", - "output": "glycine cleavage complex ; glycine decarboxylation via glycine cleavage system" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MDLLAPLSAVVLTYREVSAEALGKVGQEMKRCIERRARAFPMYVLHTCSRVEAYLYGAPPEEVQEVAEAYRRYVDSVRVITGAEAARHLFRVAAGLDSILIGETDVLGQVEEAFDRQVRAGYTRGLLKTVVERAVRVGKRVRTETAISRGPRGLGSLSIIYVSRLLDLRQAKAAVLGAGAVGSGLAMELASRGVGKLYILNRTFEKAREVAAKTGGEARPLTREEVERCLRECDVVFSSVHSMEYVIDRVPEGASVKIVVDLGVPQTVAPGLPVKVVRIEDLRQVAEQYNAERAAEVAKAEAIVEEELAALPRLLARRYVEETVAALLETAMTAAEEEGARAGCDAAALAAKTTVKRVLLPLVEKMKKMAEDGQMEEAVRLANVLTQAVGRKT", - "output": "glutamyl-tRNA reductase activity ; NADP binding ; protoporphyrinogen IX biosynthetic process" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MSEVNRESLEAILPQLKCHFTWNLFREGSMSSHMEDRVCNQVEHLNSEEKATMYDLLAYIKHLDGESKAALECLGQAEDLRKSEHNDQSEIRRLVTWGNYAWIYYHMGRLSEAQAYVDKVRQVCQKFANPYSMECPELECEEGWTRLKCGRNERAKMCFEKALEEKPKDPECSSGMAIAMFRLEEKPEKQFSVDALKQAMELNPQNQYLKVLLALKLLRMGEEAEGERLIKDALGKAPNQTDVLQKAAQFYKKKGNLDRAIELLGKALRSTVNNSPLYSLVMCRYREILEQLQNKGDADSSERRQRMAELRRLTMEFMQKTLQRRRSPLNSYSDLIDFPEVERCYQMVISKESPDVEEEDLYERYCNLQEYHRKSEDLAALECLLQFPRNERSIEKEEVKEQT", - "output": "cytoplasm ; cytosol ; mitochondrion ; identical protein binding ; cellular response to interferon-beta ; defense response to virus ; innate immune response ; negative regulation of apoptotic process ; negative regulation of cell population proliferation ; response to bacterium ; response to stilbenoid ; response to virus" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MVKVYAPASSANMSVGFDVLGAAVTPVDGTLLGDVVSVEAADHFRLHNLGRFADKLPPEPRENIVYQCWERFCQALGKTIPVAMTLEKNMPIGSGLGSSACSVAAALVAMNEHCGKPLNDTRLLALMGELEGRISGSIHYDNVAPCFLGGMQLMIEENGIISQQVPGFDEWLWVLAYPGIKVSTAEARAILPAQYRRQDCIAHGRHLAGFIHACYSRQPQLAAALMKDVIAEPYRARLLPGFSQARQAVSEIGALASGISGSGPTLFALCDKPETAQRVADWLSKHYLQNQEGFVHICRLDTAGARVVG", - "output": "cytoplasm ; ATP binding ; homoserine kinase activity ; phosphorylation ; threonine biosynthetic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MIRASDISVRLAGRQVLHGISLDAAPGAMTAIVGPNGSGKTTTLKAISGELTPSAGKVTINGRDIASLKPWELALKRGVLPQSTVISFPFTVREIVRLGLMANGGEASAHGRIADQALEAVDLAGFSGRFYQELSGGEQQRVQLARVLCQISAPVAAGEPRYLLLDEPVSSLDIRHQLTIMRLARQFCADGGGVVAVMHDLNLTSMFADQIVMMKAGRIRARGAPKDVLTDETMEAVFGCRMRVSVAPAHDIPFVLPQSATM", - "output": "plasma membrane ; ATP binding ; ATP hydrolysis activity" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MPLRLIFMGTPDFAVPTLLELAGHGHEIVAVYTRAPKPGGRRGLALVPTPIESEARRLGIPVLTPKTLKTEEALAEFRAHEADAAVVVAYGMILPQAILDAPKLGCYNLHASLLPRWRGAAPINRAIMAGDAESGVMVMKMDVGLDTGDVAMAELLAITDAMTASDLHDKLSRIGADLMVRAMAALERGGLTLTKQAEDGVTYAAKIEKAEARIDWTKPAHAVLRHIHGLSPFPGAWSEITIDGEAVRLKILRCALARGTGEPGTVVDDELTIACADSAIRITELQRAGKSPMKAADFLRGTRVAPGLRFG", - "output": "methionyl-tRNA formyltransferase activity" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MIMSLGPYASFIVTSYAAAALVVAILIGWIATDYRSQTRRLRDLDRSGITRRSGRSAMDRP", - "output": "plasma membrane ; cytochrome complex assembly ; heme transport" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MIRTDAKDGALVLFSGGQDSATCVAWALERYQTVETLGFDYGQRHRVELECREGVRDALKRRFPQWSHKLGDDHLIDLSVLGSISDTAMTRAIEIETASNGLPNTFVPGRNLLFMTIAAAIAYRRGLRALVGGMCETDFSGYPDCRDDTMKALQVALNLGMDTRFVLETPLMWLDKADTWRLAEQLGGAPLVELIRVETHTCYVGERSELHDWGFGCGECPACKLRKRGYDAYLRGESVTEAPA", - "output": "ATP binding ; ligase activity, forming carbon-nitrogen bonds ; zinc ion binding ; queuosine biosynthetic process" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MAAKLSFSDLWSDVCAVRDRSPLVHSITNLVVINFNANVLLAAGASPVMAHAHEEVADMVGIAQALVLNIGTLDPYWIESMQLALRAAAKRGIPVVLDPVGAGATKYRNEAIEQLLMTSLPTVVRGNGSEIMSVAGSAAQTRGVDSSAAATDALGAAQSLVQRTQGVVCVSGQIDHILDASHRWAQLSNGHAWMTRITGVGCSATALIGAFCAVQPDAWRATVAAMALLGVVGEVAAEKVIARGKGVGSLQMALLDELQLLDQGTFEQRLKLEVAQW", - "output": "ATP binding ; hydroxyethylthiazole kinase activity ; magnesium ion binding ; phosphorylation ; thiamine biosynthetic process ; thiamine diphosphate biosynthetic process" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MTQDELKKAVGWAALQYVQPGTIVGVGTGSTAAHFIDALGTMKGQIEGAVSSSDASTEKLKSLGIHVFDLNEVDSLGIYVDGADEINGHMQMIKGGGAALTREKIIASVAEKFICIADASKQVDILGKFPLPVEVIPMARSAVARQLVKLGGRPEYRQGVVTDNGNVILDVHGMEILDPIAMENAINAIPGVVTVGLFANRGADVALIGTPDGVKTIVK", - "output": "ribose-5-phosphate isomerase activity ; pentose-phosphate shunt, non-oxidative branch" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MSDRIDRDVINALIAGHFADPFSVLGMHKTTAGLEVRALLPDATDVWVIEPKTGRKLAKLECLDSRGFFSGVIPRRKNFFRYQLAVVWHGQQNLIDDPYRFGPLIQEMDAWLLSEGTHLRPYETLGAHADTMDGVTGTRFSVWAPNARRVSVVGQFNYWDGRRHPMRLRKESGIWELFIPGAHNGQLYKYEMIDANGNLRLKSDPYAFEAQMRPETASLICGLPEKVVQTEERKKANQFDAPISIYEVHLGSWRRHTDNNFWLSYRELADQLVPYAKWMGFTHLELLPINEHPFDGSWGYQPTGLYAPTRRFGTRDDFRYFIDAAHAAGLNVILDWVPGHFPTDDFALAEFDGTNLYEHSDPREGYHQDWNTLIYNYGRREVSNFLVGNALYWIERFGIDALRVDAVASMIYRDYSRKEGEWIPNEFGGRENLEAIEFLRNTNRILGEQVSGAVTMAEESTDFPGVSRPQDMGGLGFWYKWNLGWMHDTLDYMKLDPVYRQYHHDKLTFGILYNYTENFVLPLSHDEVVHGKKSILDRMPGDAWQKFANLRAYYGWMWAFPGKKLLFMGNEFAQGREWNHDASLDWHLLEGGDNWHHGVQRLVRDLNLTYRHHKAMHELDFDPYGFEWLVVDDKERSVLIFVRRDKEGNEIIVASNFTPVPRHDYRFGINQPGKWREILNTDSMHYHGSNAGNGGTVHSDEIASHGRQHSLSLTLPPLATIWLVREAE", - "output": "1,4-alpha-glucan branching enzyme activity ; 1,4-alpha-glucan branching enzyme activity (using a glucosylated glycogenin as primer for glycogen synthesis) ; cation binding ; hydrolase activity, hydrolyzing O-glycosyl compounds ; glycogen biosynthetic process" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MASHNENDDIPMLPISDPSSRTRARAFTSRSRSVSLSNPTSSIEGFDTSTVVLGYTGPLRTQRRPPLVQMSGPLTSTRKHEPLFLPHPSSDSVGVSSQPERYPSFAALEHKNSSEDEFVLKHANLLRSGQLGMCNDPYCTTCPSYYNRKAAQIPTSRVSALFDSTFHNALYDDAKGWARRFASSVNRYLPGIMNPHAKEVQTWTKFFALSCLLAIFIDPLFFFLIKVQEQNKCIMIDWPMTKAFVAVRSVTDVIFTMNILLQFRLAYVARESTVVGAGQLVSHPKKIALHYLKGKFFLDLFIVMPLPQILILWIIPAHLGASGANYAKNLLRAAVLFQYIPKLYRLLPFLAGQTPTGFIFESAWANFVINLLTFMLAGHVVGSCWYLFGLQRVNQCLRNACGNFGRECQDLIDCGNGNSSVLVRATWKDNASANACFQEDGFPYGIYLKAVNLTNHSNLFTRYSYSLFWGFQQISTLAGNQVPSYFLGEVFFTMGIIGLGLLLFALLIGNMQNFLQALGKRNLEMTLRRRDVEQWMSHRRLPDGIRRRVREAERFNWAATRGVNEELLFENMPDDLQRDIRRHLFKFLKKVRIFSLMDEPILDAIRERLKQRTYIGSSTVLHRGGLVEKMVFIVRGEMESIGEDGSVLPLYEGDVCGEELLTWCLERSSVNPDGTRIRMPSKGLLSSRNVRCVTNVEAFSLSVADLEDVTSLFSRFLRSHRVQGAIRYDSPYWRLRAARQIQVAWRYRRRRLHRLCTPQSSYSL", - "output": "chloroplast thylakoid membrane ; calmodulin binding ; cAMP binding ; cGMP binding ; monoatomic ion channel activity ; response to nematode" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MHAYRTHTCGQLREQNAGETVRLSGWIHRKRDHGNLLFIDLRDHYGLTQCVIDTSNPNFGTVEGLRVESVITVTGKVVARTTETVNDKLPTGRIEVQVKELEVQSAADQVPLQVNSEQDAGEELRLRYRFLDLRREKMQRNMVLRSNVIASVRRRMIEQGFTEFQTPILTASSPEGARDFLVPARNHPGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDSRADRSPGEFYQLDFEMSFVTQDDVFAAIEPVIHGIFEEFSGFTGVKKSVSPYPFVRIPFDEAMLKYGSDKPDLRNPLVIVDVTDVFRRPDVEFKAFKGVIEKGGVVRTIRVPGVADRPRSFYDKLNDWARGLGAPGLGYIVFEGGAGKGPIAKFVPEAAQAALRQATGAVDGDAVFFVCDQPGPAAKLAGQARTEIATQLDLIAKDRFEFCWIVDFPMYEYDEERKKIDFSHNPFSMPQGGLEALETQDPLTIKAFQYDIVCNGVELSSGAIRNHRPEIMYKAFEIAGYAAEDLEAKFGGMLSAFKLGAPPHGGSAPGIDRMVMLLADEPNIREVILFPLNQRAEDLLMQAPNGVAPERLKELHLKLDLPKPKIAG", - "output": "cytoplasm ; aspartate-tRNA ligase activity ; aspartate-tRNA(Asn) ligase activity ; ATP binding ; nucleic acid binding ; aspartyl-tRNA aminoacylation" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MAWIPLLLPLLTLCTGSEASYELTQPPSVSVSLGQMARITCSGEALPKKYAYWYQQKPGQFPVLVIYKDSERPSGIPERFSGSSSGTIVTLTISGVQAEDEADYYCLSADSSGTY", - "output": "extracellular space ; immunoglobulin complex ; plasma membrane ; adaptive immune response ; immune response" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MVFDSFDIKSLIRPVIDFPKPGVIFRDITPLFQSPKALRLVMDSFAHRYVEADFTHIGAMDARGFLIGSVLAYQLNKPLVLFRKQGKLPADVLAEGYATEYGEAFLEVHADSLCEGDSVVMFDDLIATGGTLIAAANLIRRMGARVHEAAAIIDLPELGGSQRLEDMGIPTFCLTQFALTDK", - "output": "cytoplasm ; adenine phosphoribosyltransferase activity ; adenine salvage ; AMP salvage ; purine ribonucleoside salvage" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MKTWSHVALLACLSIKWLTCVMADSIYCDDPDMCSMTKRFLRFGRALDTTDPFIRLRRQFYRIGRGGYQPYQDKRFLRFGRSEQPDVDDYLRDVVLQSEEPLYRKRRSTEAGGQSEEMTHRTARSAPEPAAENREIMKRETGAEDLDEEKRFMRFGRGDEEAEKRFMRFGKSFMRFGRDMSDVDKRFMRFGKRFMRFGREPGTDKRFMRFGREPGADKRFMRFGKSFDGEEENDDDLYYNESDADSNDDVDKRFMRFGKSAEEKRFMRFGKSEDASRDKKEFLRIGKRESRSAEVENNIQIAAKQS", - "output": "extracellular region ; neuropeptide signaling pathway" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MSSTENPDSVAAAEELHALRVEAQVLRRQLAQSPEQVRELESKVDSLSIRNSKLMDTLKEARQQLIALREEVDRLGQPPSGYGVLLSVHEDKTVDVFTSGRKMRLTCSPNIDTDTLALGQTVRLNEALTIVEAGTYEQVGEISTLREVLDDGLRALVVGHADEERIVWLAAPLAAVFADPEADIIAYDADSPTRKLRPGDSLLVDTKAGYAFERIPKAEVEDLVLEEVPDVHYDDIGGLGRQIEQIRDAVELPFLHKDLFHEYSLRPPKGVLLYGPPGCGKTLIAKAVANSLAKKIAEARGQDSKDAKSYFLNIKGPELLNKFVGETERHIRMIFQRAREKASEGTPVIVFFDEMDSIFRTRGSGVSSDVETTVVPQLLSEIDGVEGLENVIVIGASNREDMIDPAILRPGRLDVKIKIERPDAESAQDIFSKYLVDGLPINADDLAEFGGDRTACLKAMIVRVVDRMYAESEENRFLEVTYANGDKEVLFFKDFNSGAMIQNIVDRAKKYAIKSVLDTGAPGLRVQHLFDSIVDEFAENEDLPNTTNPDDWARISGKKGERIVYIRTLVTGKNASASRAIDTESNTGQYL", - "output": "proteasome complex ; ATP binding ; ATP hydrolysis activity ; modification-dependent protein catabolic process ; proteasomal protein catabolic process" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MNKPQSFFHLHLISDATGETLLAAGRAASAQYKDARAIEHIYPLIRTEKQVAKVFEDIEEEPGIILYTVVDQKLARGIDERCATMGLPCVSVLEPVLTVFQSYLGTPAGRRVGAQHVLDAEYFRRIDALNFTMDHDDGQLPANMDDADVVLIGISRTSKTPTSIYLANRGIKTANIPIVLGVPVPESLVSASKPLIVGLIATAERISHVRQNRILGNSSSYVPTDYVDRAAINEELAYARQICTRHGWPMIDVSRRSIEETAAAIVALRGKNR", - "output": "ADP binding ; ATP binding ; phosphotransferase activity, phosphate group as acceptor ; protein serine/threonine kinase activity ; protein dephosphorylation ; protein phosphorylation" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MSHTVKIYDTCIGCTQCVRACPTDVLEMVPWDGCKAAQVASSPRTEDCVGCKRCETACPTDFLSIRVYLGAETTRSMGLAY", - "output": "photosystem I ; plasma membrane-derived thylakoid membrane ; 4 iron, 4 sulfur cluster binding ; electron transfer activity ; metal ion binding ; photosynthetic electron transport in photosystem I" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MNAIVALCHFCELHGPRTLFCTEVLHAPLPQGDGNEDSPGQGEQAEEEEGGIQMNSRMRAHSPAEGASVESSSPGPKKSDMCEGCRSLAAGHPGYISHDKETSIKYVSHQHPSHPQLFSIVRQACVRSLSCEVCPGREGPIFFGDEQHGFVFSHTFFIKDSLARGFQRWYSIITIMMDRIYLINSWPFLLGKVRGIIDELQGKALKVFEAEQFGCPQRAQRMNTAFTPFLHQRNGNAARSLTSLTSDDNLWACLHTSFAWLLKACGSRLTEKLLEGAPTEDTLVQMEKLADLEEESESWDNSEAEEEEKAPVLPESTEGRELTQGPAESSSLSGCGSWQPRKLPVFKSLRHMRQVLGAPSFRMLAWHVLMGNQVIWKSRDVDLVQSAFEVLRTMLPVGCVRIIPYSSQYEEAYRCNFLGLSPHVQIPPHVLSSEFAVIVEVHAAARSTLHPVGCEDDQSLSKYEFVVTSGSPVAADRVGPTILNKIEAALTNQNLSVDVVDQCLVCLKEEWMNKVKVLFKFTKVDSRPKEDTQKLLSILGASEEDNVKLLKFWMTGLSKTYKSHLMSTVRSPTASESRN", - "output": "centrosome ; cilium ; cytoplasm ; cytosol ; lysosomal membrane ; lysosome ; mitotic spindle ; nucleus ; plasma membrane ; enzyme binding ; enzyme inhibitor activity ; GTPase activator activity ; protein-containing complex binding ; cell proliferation involved in kidney development ; cell-cell junction assembly ; cellular response to amino acid starvation ; cellular response to starvation ; energy homeostasis ; epithelial cell proliferation ; ERK1 and ERK2 cascade ; hemopoiesis ; in utero embryonic development ; intrinsic apoptotic signaling pathway ; lysosome localization ; negative regulation of ATP biosynthetic process ; negative regulation of brown fat cell differentiation ; negative regulation of cell growth ; negative regulation of cell migration ; negative regulation of cell proliferation involved in kidney development ; negative regulation of cellular respiration ; negative regulation of cold-induced thermogenesis ; negative regulation of epithelial cell proliferation ; negative regulation of ERK1 and ERK2 cascade ; negative regulation of gene expression ; negative regulation of glycolytic process ; negative regulation of mitochondrial DNA metabolic process ; negative regulation of mitochondrion organization ; negative regulation of muscle tissue development ; negative regulation of post-translational protein modification ; negative regulation of protein kinase B signaling ; negative regulation of protein localization to nucleus ; negative regulation of Rho protein signal transduction ; negative regulation of TOR signaling ; negative regulation of transcription by RNA polymerase II ; positive regulation of apoptotic process ; positive regulation of autophagy ; positive regulation of cell adhesion ; positive regulation of GTPase activity ; positive regulation of intrinsic apoptotic signaling pathway ; positive regulation of protein phosphorylation ; positive regulation of TOR signaling ; positive regulation of TORC1 signaling ; positive regulation of transcription by RNA polymerase II ; positive regulation of transforming growth factor beta receptor signaling pathway ; protein kinase B signaling ; regulation of cytokinesis ; regulation of histone acetylation ; regulation of pro-B cell differentiation ; regulation of protein phosphorylation ; regulation of Ras protein signal transduction ; regulation of TOR signaling ; TOR signaling ; transforming growth factor beta receptor signaling pathway" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MEKTCIDALPLTMNSSEKQETVCIFGTGDFGRSLGLKMLQCGYSVVFGSRNPQKTTLLPSGAEVLSYSEAAKKSGIIIIAIHREHYDFLTELTEVLNGKILVDISNNLKINQYPESNAEYLAHLVPGAHVVKAFNTISAWALQSGALDASRQVFVCGNDSKAKQRVMDIVRNLGLTPMDQGSLMAAKEIEKYPLQLFPMWRFPFYLSAVLCVFLFFYCVIRDVIYPYVYEKKDNTFRMAISIPNRIFPITALTLLALVYLPGVIAAILQLYRGTKYRRFPDWLDHWMLCRKQLGLVALGFAFLHVLYTLVIPIRYYVRWRLGNLTVTQAILKKENPFSTSSAWLSDSYVALGILGFFLFVLLGITSLPSVSNAVNWREFRFVQSKLGYLTLILCTAHTLVYGGKRFLSPSNLRWYLPAAYVLGLIIPCTVLVIKFVLIMPCVDNTLTRIRQGWERNSKH", - "output": "early endosome membrane ; endosome ; extracellular exosome ; Golgi membrane ; membrane ; nucleoplasm ; plasma membrane ; cupric reductase activity ; electron transfer activity ; FAD binding ; ferric-chelate reductase (NADPH) activity ; heme binding ; metal ion binding ; copper ion import ; fat cell differentiation ; iron import into cell ; iron ion transmembrane transport ; protein homotrimerization" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MNKALLPLLLCCFIFPASGKDAGWQWYNEKINPKEKENKPVPAAPRQEPDIMQKLAALQTATKRALYEAILYPGVDNFVKYFRLQNYWAQQAGLFTMSARKAMLAHPELDYNLQYSHYNGTVRNQLAADQAQQRQAIAKLAEHYGIMFFYRGQDPIDGQLAQVINGFRDTYGLSVIPVSVDGVINPLLPDSRTDQGQAQRLGVKYFPAMMLVDPKQGSVRPLSYGFISQDDLAKQFLNVSEDFKPNF", - "output": "periplasmic space" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MSLPGLELSQQPIEARRAPPQPTQISLPKGSEWRFEVAFGNTTRVKLLAGTAELFGTELATSQTYTFSGTKAAIYTWHGCTLEVGAGDPVPIGPVGSAPVPPGPGNGGCQVEYIAEETPMAEYANVHFALETMRHDAKAAGRDGPRVLILGPEDAGKTSLAKILTGYATKMGRQPLVVNLDPSEGMLSVPGALTATAFRSMIDVEEGWGSSPMSGPSPIPVKLPLVYFYGLPACLDGDGSYYKAIVSRLALAVTGRMAEDSDAREAGVIIDTPGIIGQGKGASEDVIHHIVTEFSISTILVIGSERLYSTMVKNYDNKPIATSATAAASDERISVVKLTKSGGCVDRDATFMKYVRESQIRSYFFGSPVPSTASSALSLSSTTTGTTMTLSPHTSQVDFNSLSIYSITIATEGEEDEYDPSKFDSFLPGGHEENDHNTSLTGTTSLQPPSGLLPGLRSELPSATTGFPSASTSSTTPFTNLPSPAPMSLANTLLAITNAAPNASLDEVRDASIMGFIYIADVDEKKGQGGKLRLLAPVGGRVPNRAMIWGRKWPGEVVGLIG", - "output": "mRNA cleavage factor complex ; ATP binding ; polynucleotide 5'-hydroxyl-kinase activity ; mRNA 3'-end processing" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MAGNKPFNKQQAEPRERDPQVAGLKVPPHSIEAEQSVLGGLMLDNERWDDVAERVVADDFYTRPHRHIFTEMARLQESGSPIDLITLAESLERQGQLDSVGGFAYLAELSKNTPSAANISAYADIVRERAVVREMISVANEIAEAGFDPQGRTSEDLLDLAESRVFKIAESRANKDEGPKNIADVLDATVARIEQLFQQPHDGVTGVNTGYDDLNKKTAGLQPSDLIIVAARPSMGKTTFAMNLVENAAMLQDKPVLIFSLEMPSEQIMMRSLASLSRVDQTKIRTGQLDDEDWARISGTMGILLEKRNIYIDDSSGLTPTEVRSRARRIAREHGGIGLIMIDYLQLMRVPALSDNRTLEIAEISRSLKALAKELNVPVVALSQLNRSLEQRADKRPVNSDLRESGSIEQDADLIMFIYRDEVYHENSDLKGIAEIIIGKQRNGPIGTVRLTFNGQWSRFDNYAGPQYDDE", - "output": "cytosol ; DNA helicase complex ; DnaB-DnaC complex ; DnaB-DnaC-DnaT-PriA-PriB complex ; DnaB-DnaC-DnaT-PriA-PriC complex ; DnaB-DnaC-Rep-PriC complex ; DnaB-DnaG complex ; primosome complex ; replisome ; ATP binding ; ATP hydrolysis activity ; DNA binding ; DNA helicase activity ; helicase activity ; identical protein binding ; DNA duplex unwinding ; DNA replication ; DNA replication initiation ; DNA replication, synthesis of RNA primer ; DNA unwinding involved in DNA replication ; replication fork processing ; response to ionizing radiation" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MKQFLDFLPLVVFFAFYKIYDIYAATAALIVATAIVLIYSWVRFRKVEKMALITFVLVVVFGGLTLFFHNDEFIKWKVTVIYALFAGALLVSQWVMKKPLIQRMLGKELTLPQPVWSKLNLAWAVFFILCGLANIYIAFWLPQNIWVNFKVFGLTALTLIFTLLSGIYIYRHMPQEDKS", - "output": "plasma membrane" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MLPPPKSAAVQIVRPPSPSSEKAKEKEKKHSPEKRETAQRICRNVMIYGYCKYQDQGCIYYHPPAGADPSTPQNSSPVAHAPTPSAPTPLAGTPAREKPTLSIEHLAAPVFVPKGLDSSPRASTPSVPTPSAPTPPVWPSLPSTGLLPRQDVQVSAQPSHAQLSATASPMAYDDPSHIALSAAHAHAQAQALTHGILDPHAHAPPVDQSMYLPPRQPLDYNLYAAPLPSIGGNPLYPTHPHAFFVSDDLRRAIQAKQEAVYAGANGASAPGLPQELGVYHSLIPLPLPAPTAQCPPTQSQPSKVYGLPSPVYRATSEVDGNTYCLRRVEGFKLVNQLAFASMDTWRRMRHPNIVGLKEAFTTKTFGDNSLIMVYDYHPLSTTLYDEYLSPNPPEPSPASALANQPPKRRSSPPERILWSYVTQIANALKAIHSSGLAVRNLDASKILLTGKNRIRLNGCGVWDVLAFDNKTPVQAFQQEDLLSFGKLIISLTCDFFQPTLPFSLPLEHISRHYSSDLSNLILYLISKPAQGQIKSIDEVVKMMGPRILNELDAVQSYADVLENELGAEVENGRIVRLLTKLGFINERAEFELDPRWSDTGDRYILKLFRDYVFHSVGVDGKPILDLSHVLVCLNKLDAGLDERVMLVSRDDQSCLVVSYREIKHCIEAAFNELKNAGNNHRVHR", - "output": "PAN complex ; ATP binding ; metal ion binding ; protein kinase activity ; RNA binding ; mRNA processing ; nuclear-transcribed mRNA poly(A) tail shortening ; protein phosphorylation" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MLVKPMACYFEIWTRKVTTIEDFSLAIANRFKQMGSHSDSEVDWDNEEEVWEDEVHEFCCLFCDSTFTCLKDLWSHCKEAHNFDFYQVKQQNNLDFYACIKLVNYIRSQVKEGKTPDLDKLSDILRSDEYMISVLPDDSVLFSLGDELDSDFEDDNTLEIEVENPADVSKDAEIKKLKLQNQLLISQLEEIRKDKMNELTSQTTDQLSVTPKKADNDSYYFESYAGNDIHFLMLNDSVRTEGYRDFVYHNKHIFAGKTVLDVGCGTGILSMFCAKAGAKKVYAVDNSDIIQMAISNAFENGLADQITFIRGKIEDISLPVGKVDIIISEWMGYALTFESMIDSVLVARDRFLAPSGIMAPSETRLVLTATTNTELLEEPIDFWSDVYGFKMNGMKDASYKGVSVQVVPQTYVNAKPVVFARFNMHTCKVQDVSFTSPFSLIIDNEGPLCAFTLWFDTYFTTKRTQPIPEAIDEACGFTTGPQGTPTHWKQCVLLLRNRPFLQKGTRVEGTISFSKNKKNNRDLDISVHWNVNGKADSQSYVLN", - "output": "cytoplasm ; cytosol ; nucleus ; ribonucleoprotein complex ; ribosome ; metal ion binding ; protein-arginine N-methyltransferase activity ; protein-arginine omega-N asymmetric methyltransferase activity ; ribosome binding ; peptidyl-arginine methylation ; ribosome biogenesis" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MLDKTRLRIAMQKSGRLSEDSQALLARCGIKINLHQQRLIAFAENMPIDILRVRDDDIPGLVMDGVVDLGIIGENVLEEELLTRRAQGDDPRYTLLRRLDFGACRLSLAMPIDAAYDGARGLQDCRIATSYPHLLKRYLDGQGVRFKSCLLNGSVEVAPRAGLADAICDLVSTGATLEANGLREVEVIYRSKACLIQRDGEMPPAKQALIERLMTRIQGVIQARESKYIMLHAPSDRLEEIMALLPGAERPTLLPLAGDKRRVAMHMVSSETLFWETMEQLKALGASSILVLPIEKMME", - "output": "cytoplasm ; ATP binding ; ATP phosphoribosyltransferase activity ; magnesium ion binding ; histidine biosynthetic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MPTITLPDGSQRSFDHPVTVAEVAQSIGAGLAKATLAGKVDGKLVDACDLIERDASLQIITPKDEEGLEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIDEGFYYDIAIDRPFTPEDMAAIEKRMAELIDKDYDVIKKVTPRAEVIEVFTSRGEDYKLRLVDDMPDEQAMGLYYHEEYVDMCRGPHVPNTRFLKAFKLTRISGAYWRGDSKNEQLQRIYGTAWADKKQLAAYIQRIEEAEKRDHRRIGKQLDLFHTQEEAPGMVFWHPAGWTLYQNLEQYMRQVQRENGYQEVRTPQVVDRILWEKSGHWSNYAENMFTTSSENRDYAVKPMNCPCHVQIFNQGLKSYRDLPLRMAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEEQVKKEAADFIKLTLKVYADFGFSDIAMKLSTRPAKRVGSDELWDRAEGALAEALNESGLAWEYQPGEGAFYGPKIEFTLRDCLGRNWQCGTLQYDPNLPERLDASYVAEDNSRQRPVMLHRAILGSFERFIGMLIEHYAGAFPAWLAPTQAVIMNITDKQAAFAIEVEKTLVQSGFRAKCDLRNEKIGFKIREHTLLKTPYLLVIGDREVETRSVAVRSREGVDMGSMPLEQFAQLLAQAVSRRGRQESE", - "output": "cytoplasm ; ATP binding ; metal ion binding ; threonine-tRNA ligase activity ; tRNA binding ; threonyl-tRNA aminoacylation" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MPKILVSAGEASGDLYASLVVQELRRIMPDAEFFGCTGPRLRAAGVRTIVDSADLAVVGLIEVVAHIPRIYGEFRKLLRAAREERPLLAILTDSPDFHLRVARKLHRQEVPVVYLVAPQAWAWRRGRVREMRRTIRRLLCIFPFEEEFFRRYGVPATYIGHPLAGLVHPALSREEFFKKHRLAAERPLVSVLPGSRRGEAARHIPALLDAVDRIYREQAVNVVLPASATTGVAFFQERMGNSPIRVIEGESWDAMAHSDLALAASGTVTVEAALLGTPMVTFYKVTGVSWLAGKFLVDIPFYSMVNLIAGRAVVPELMQSQMTGENLAREALRLLQGGRDREEMKAGLAQVKEKLAGRTGAPGRAALAIQEILEGQVTHVS", - "output": "lipid-A-disaccharide synthase activity ; lipid A biosynthetic process" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MMNPLIIKLGGVLLDSEEALERLFTALVNYRESHQRPLVIVHGGGCVVDELMKGLNLPVKKKDGLRVTPADQIGIITGALAGTANKTLLAWAKKHHIASVGLFLGDGDSVNVTQLDEALGHVGLAQPGSPKLINMLLENGFLPVVSSIGVTDDGQLMNVNADQAATALAATLGADLILLSDVSGILDGKGQRIAEMTASKAEQLIDQGIITDGMIVKVNAALDAARALGRPVDIASWRHAEQLPALFNGTPIGTRILA", - "output": "cytoplasm ; acetylglutamate kinase activity ; ATP binding ; arginine biosynthetic process via ornithine ; phosphorylation" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MKQYRNFVDGKWVESSKTFQDVTPIDGSVVAVVHEADRDLVDAAVKAGHRALEGEWGRTTAAQRVDWLRRIANEMERRQQDFLDAEMADTGKPLSMAATIDIPRGIANFRNFADILATAPVDSHRLDLPDGAYALNYAARKPLGVVGVISPWNLPLLLLTWKVAPALACGNAVVVKPSEDTPGTATLLAEVMEAVGIPPGVFNLVHGFGPNSAGEFISQHPDISAITFTGESKTGSTIMRAAAEGVKPVSFELGGKNAAVIFADCDFEKMLDGMMRALFLNSGQVCLCSERVYVERPIFDRFCVALAERIKALKVDWPHETDTQMGPLISSKHRDKVLSYFELARQEGATFLAGGGVPRFGDERDNGAWVEPTVIAGLSDDARVVREEIFGPICHVTPFDSESEVIRRANDTRYGLAATIWTTNLSRAHRVSELMRVGISWVNTWFLRDLRTPFGGAGLSGIGREGGMHSLNFYSELTNVCVRIDKESPDV", - "output": "aminomuconate-semialdehyde dehydrogenase activity ; aromatic compound catabolic process ; organic substance metabolic process" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MVVAVYPGTFDPLTRGHEDLVRRASSIFDTLVVGVADSRAKKPFFSLEERLKIANEVLGHYPNVKVMGFTGLLKDFVRANDARVIVRGLRAVSDFEYEFQMAGMNRYLLPDVETMFMTPSDQYQFISGTIVREIAQLGGDVSKFVFPSVEKWLTEKVAAMAQGPSA", - "output": "cytoplasm ; ATP binding ; pantetheine-phosphate adenylyltransferase activity ; coenzyme A biosynthetic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MAKYENLVTRFLKYVKTETRSNEDSTTIPSTQTQVEFIKGLANELKGLGLQNVHISDESGYVFATLPSNLEDDANTKVVGFISHVDTADFNAHNVQPQIVENYDGESDIKLDEAGNFVLTTAEFPNLRNYKGHDLITTDGSTLLGADDKSGVAEIMSAMEYLQAHPEIKHGEIKVGFGPDEEIGTGADNFNVEDFGADIAYTVDGGPLGELEYETFNAAQAKLTFKGKDVHTGTAKNVMVNAIQLAINYQNSLPADEVPEKTEGREGFFHLFKFDGSVEEAHTTYIIRDHDRKHFEERKQLMLDIAERMNTELGEERVVIDLQDQYYNMREVLEKDMTAVDIAKEAMEDLGITPEIYPVRGGTDGSKISFMGLPTPNLFAGGENMHGRYEYVSTQVMEKATDVILEIVKLLAK", - "output": "cytoplasm ; metallopeptidase activity ; tripeptide aminopeptidase activity ; zinc ion binding ; peptide catabolic process ; proteolysis" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MLSVYEKGNALDKRVLEEWLLSEDILMENAAMALERAVLQNASLGAKVIILCGSGDNGGDGYTLARRLVGRFKTLVFEMKLAKSPMCQLQKERAKKVGVVIKAWEEKNEDLECDVLVDCVVGSAFKGGLEPFLDFESLSQKARFKIACDIPSGIDSKGRVDKRAFKADTTISMGAIKSCLLSDKAKDYIGELKVGHLGVFNQIYEIPTDTFLLEKSDLKLPLRDRKNAHKGDYGHAHVLLGKHSGAGLLSALSALSFGSGVVSIQALECEITSNNKPLELVFCENFPKKLSAFALGMGLENIPKDFKKWLELAPCVLDAGVFYHKEVLQALEKEVILTPHPKEFLSLLKSVGINISMLELLDNKLEIARDFSQKYPKVVLLLKGANTLIAHQGRVFINNLGSVALAKAGSGDVLAGLIVSLLSQNYTPLDAAINASLAHALAGLEFKNHYALTPLDLIEKIKRL", - "output": "ADP-dependent NAD(P)H-hydrate dehydratase activity ; ATP binding ; metal ion binding ; NADHX epimerase activity ; NADPHX epimerase activity ; nicotinamide nucleotide metabolic process" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MKDYVVKATAYDGEVRAIALRATEMVKEACKRQGTWPTASAALGRTMMGGALMASMLKGKDKLTVRIQGNGPIGEIIVDAHASGATRGTVTNPHVSPELNSKGKLDVARVVGTEGTLSVVKDLGMKEPFTGSVPIVSGEIGDDFTYYFANSEQTPSSVGVGVLVNPDESVLAAGGFVIQLLPGAKEATITEIEKRIGETPPISKLVEQGKTPEEIINGLLGEENVKFLETKPVFFECSCSKERIGNAIISLGTKEIEAMITEDGGAETVCHFCNESYSFTEAELKALLEEAESKR", - "output": "cytoplasm ; unfolded protein binding ; protein folding" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MTLAGQTIAVIDYGMGNLRSVSKALEHVAGGKQVIVTADPAVVAAAERVVFPGQGAMPDCMRELDARGLRTAVLAAAKDKPFLGICVGEQMLFEHSDEGNVPALGVFAGNVKRFPDEKMHLPTGERLKVPHMGWNEVRQKPHALWSGIADGSRFYFVHSYFVEPADLALVTGICEYGVPFTCAVGRDNIFAVQFHPEKSARDGLQLLKNFVEWQP", - "output": "cytoplasm ; glutaminase activity ; imidazoleglycerol-phosphate synthase activity ; lyase activity ; glutamine metabolic process ; histidine biosynthetic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MDSITSAASVVAAGLAVGLAAIGPGIGQGTASGGAVEGIARQPEAEGKIRGTLLLSLAFMESLTIYGLVVALVLLFANPFA", - "output": "plasma membrane-derived thylakoid membrane ; proton-transporting ATP synthase complex, coupling factor F(o) ; lipid binding ; proton-transporting ATP synthase activity, rotational mechanism" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MASLKDIRAQIESTKNTQQITKAMKLVSAAKLRKAQNNIVNMRPYALALRQVIADIAVTNKVSHPLMEKKEQVKNVLLVVITSDRGLCGAFNSNINKFAEAYYNSNKASLEKIDFLFVGRRGHDYFARRGIKAVDYITKLDKDISYELASKVANRVMNDYLEGSYDEVRIVHNEFKSAISQVVTAETLLPIDLGMTTFKKEADTASNFAVDMIFEPAPEQIIKELLEKHFELQVYRCMSESVAGEHGARMSAMENATNNAKEMINKLTLTYNKLRQEKITTELIEIVSGAEALKG", - "output": "plasma membrane ; proton-transporting ATP synthase complex, catalytic core F(1) ; ATP binding ; proton-transporting ATP synthase activity, rotational mechanism ; proton motive force-driven plasma membrane ATP synthesis" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MPNIDFVGKRSFFIYLSIALILFSVIVIFVKGFNLGVDFSGGSEIIVSFDKSYTIDELRNGLQTINQEYATAKIIQTNPGGGASDQFFYIITVRDSFPTLEEKQMFINSLEESFSDSSLNIEQFNDVSGYAAREIRSYAWYAVIISLIVLLAYITIRFQFSYGVGAILALAHDVIITLGFYSLFGIEMNLTAIAAFLTLAGYSLNDTIVVYDRIRENRSKNRGMDIESITNKSINEVIVRSLNTSLTTFLVVFMMFLLGGRSIASFAFGLTVGVIIGTYSSLYIASPIVIGMVKRRKKTQKA", - "output": "plasma membrane ; protein-transporting ATPase activity ; intracellular protein transmembrane transport ; protein targeting ; protein transport by the Sec complex" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MKIRSPIVSVLGHVDHGKTTLLDYIRGSTIAAKEAGGITQHIGATEIPNDTIENICGDFISKLAIKDLIPGLFFIDTPGHAAFTSLRKRGGALADLAVLILDVNDGFKPQTYEALNILKMYKTPFIVVANKIDRLFGWEVHEGASFRETFSNQAKSVQQDLDNKIYEIVGELHKEGFQSERFDRVSNFASQISIIPISAKTGEGVIEVLAMLLGLAQEYLTEQLEIDENAPAKGTVLEIKEETGLGVTLDAIIYDGVLRTNDEIALMLSSEDVLVTKIRSILRPLPLEEMRDSKKKFRKLDEVVAAAGIKVAAPHLDDVVSGSPLRVLSEDTDVEQEILNEIDNITIDTEDEGILVKADTIGSLEAVVKLLREMDIPIRAADIGDVNRRDIINSSIAYDENELHGAIIAFNVDVHPNSEEDLNNSEVKLFSGDVIYQILEEYEEWVKQKQEDKKKSFYDAIIKPAKFVSLPKLVFRQSKPAIIGIESLSGTLKQGQQLINKDGHVVGSIASMEDKGETLPDISRGQRVAMAIKDAIVGKDFEEGDELYVDIPEKHYKYIEREFKDKLTEDEFETLYEFLEIKRKQDSDWGSFGLFE", - "output": "GTP binding ; GTPase activity ; translation initiation factor activity" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MLCCMRRTKQVEKNDDDQKIEQDGIKPEDKAHKAATKIQASFRGHITRKKLKGEKKDDVQAAEAEANKKDEAPVADGVEKKGEGTTTAEAAPATGSKPDEPGKAGETPSEEKKGEGDAATEQAAPQAPASSEEKAGSAETESATKASTDNSPSSKAEDAPAKEEPKQADVPAAVTAAAATTPAAEDAAAKATAQPPTETGESSQAEENIEAVDETKPKESARQDEGKEEEPEADQEHA", - "output": "cytoplasm ; dendrite ; filopodium membrane ; GABA-ergic synapse ; growth cone membrane ; perikaryon ; plasma membrane ; postsynaptic density ; presynapse ; calmodulin binding ; lysophosphatidic acid binding ; phosphatidylinositol phosphate binding ; phosphatidylserine binding ; astrocyte differentiation ; axon choice point recognition ; axon regeneration ; cell fate commitment ; protein kinase C-activating G protein-coupled receptor signaling pathway ; radial glial cell differentiation ; regulation of filopodium assembly ; regulation of growth ; regulation of postsynaptic specialization assembly ; response to wounding ; tissue regeneration" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MQISKFFKFVFISVSLCGSLLFPQMANAYPVFAQQAYDNPREATGRIVCANCHLAQKPTEVEVPQAVLPDTVFEAVVNIPYDTKVQQVTASGTPGPLNVGAVVILPEGFKLAPKGRMSDELKAKTKGVFVQPYSKTRPNILVVGPILGEKNREVTFPILAPDPAQDKSVHYLNYPIYVGANRGRGQVYPSGEKSNNNTFTSTAAGKVTAIEAGDKGTTRVTIQTAAGEAKEQTVPAGLKVSVKTGDVIQADQALSYNPNVGGFGQAETEVILQSPNRVKGMIAFFFTVTVAQILLVLKKKQFEKVQAAEMNF", - "output": "chloroplast thylakoid membrane ; electron transfer activity ; heme binding ; iron ion binding ; photosynthesis" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MALQRTFSIIKPDAVAKNVIGEITTRFEKAGLRVVASKMVQLSEREAAGFYAEHSERGFFKDLVAFMTSGPVIVQVLEGENAVAKNRELMGATNPKEAAPGTIRADFAVSIDENAVHGSDSEASAAREIAYFFAATEVCARIR", - "output": "cytoplasm ; ATP binding ; metal ion binding ; nucleoside diphosphate kinase activity ; CTP biosynthetic process ; GTP biosynthetic process ; phosphorylation ; UTP biosynthetic process" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MSVIDTNQIDLVAPRISEAGVADYIALLKPRVMSLVVFTALVGMLLAPGDFHPVLAITAMLCIAVGGGAAGALNMWYEDDIDGQMTRTANRPIPRGRVTRPEALTFGITLSFFSVMTLGILVNWVAGALLAFTIFFYVVIYTMWLKRSTAQNIVIGGAAGALPPVVAWAAVTGSLAVEPLLLFAIIFFWTPPHFWALALFRNDDYARAGVPMLPVVAGQDHTRLQILLYTIVLVAVAAAPWPLGYFSAIYGVASLALGGWMLVLALRVYRHRTGSAALRATRNLFKFSILYLFALFSILLLEVVAKAVWRLFA", - "output": "plasma membrane ; protoheme IX farnesyltransferase activity ; heme O biosynthetic process" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MPVEEPLATLSSIPDSSADQAPPLIADEFTLDLPRIPSLELPLNVSTKHSSIQKAIKMCGGIEKVKEAFKEHGPIESQHGLQLYLNDDTDSDGSKSYFNEHPVIGKRVPFRDESVILKVTMPKGTLSKNNNSVKDSIKSLKDSNKLRVTPVSIVDNTIKFREMSDFQIKLDNVPSAREFKSSFGSLEWNNFKSFVNSVPDNDSQPQENIGNLILDRSVKIPSTDFQLPPPPKLSMVGFPLLYKYKANPFAKKKKNGVTEVKGTYIKNYQLFVHDLSDKTVIPSQAHEQVLYDFEVAKKTKVYPGTKSDSKFYESLEECLKILRELFARRPIWVKRHLDGIVPKKIHHTMKIALALISYRFTMGPWRNTYIKFGIDPRSSVEYAQYQTEYFKIERKLLSSPIVKKNVPKPPPLVFESDTPGGIDSRFKFDGKRIPWYLMLQIDLLIGEPNIAEVFHNVEYLDKANELTGWFKELDLVKIRRIVKYELGCMVQGNYEYNKYKLKYFKTMLFVKESMVPENKNSEEGMGVNTNKDADGDINMDAGSQMSSNAIEEDKGIAAGDDFDDNGAITEEPDDAALENEEMDTDQNLKVPASIDDDVDDVDADEEEQESFDVKTASFQDIINKIAKLDPKTAETMKSELKGFVDEVDL", - "output": "nucleoplasm ; transcription factor TFIIIC complex ; DNA binding ; 5S class rRNA transcription by RNA polymerase III ; transcription by RNA polymerase III ; transcription initiation at RNA polymerase III promoter" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MEAPICLVENWKNQLTVNLEAIRILEQIAQPLVVVAIVGLYRTGKSYLMNRLAGRNHGFSLGSTVQSETKGIWMWCVPHPTKPTHTLVLLDTEGLGDVEKGDPKNDSWIFALAVLLSSTFVYNSMSTINQQALEQLHFVTELTQLIRAKSSPREDKVKDSSEFVGFFPDFIWAVRDFALELKLNGRPITEDEYLENALKLIQGDNLKVQQSNMTRECIRYFFPVRKCFVFDRPTSDKRLLLQIENVPENQLERNFQVESEKFCSYIFTNGKTKTLRGGVIVTGNRLGTLVQTYVNAINSGTVPCLENAVTTLAQRENSIAVQKAADHYSEQMAQRMRLPTDTLQELLTVHAACEKEAIAVFMEHSFKDDEQEFQKKLVVTIEERKEEFIRQNEAASIRHCQAELERLSESLRKSISCGAFSVPGGHSLYLEARKKIELGYQQVLRKGVKAKEVLKSFLQSQAIMEDSILQSDKALTDGERAIAAERTKKEVAEKELELLRQRQKEQEQVMEAQERSFRENIAKLQEKMESEKEMLLREQEKMLEHKLKVQEELLIEGFREKSDMLKNEISHLREEMERTRRKPSLFGQILDTIGNAFIMILPGAGKLFGVGLKFLGSLSS", - "output": "cytoplasmic vesicle ; cytosol ; Golgi apparatus ; Golgi membrane ; nucleus ; perinuclear region of cytoplasm ; plasma membrane ; symbiont-containing vacuole membrane ; GTP binding ; GTPase activity ; identical protein binding ; protein homodimerization activity ; activation of innate immune response ; adhesion of symbiont to host ; cellular response to interferon-beta ; cellular response to lipopolysaccharide ; cellular response to tumor necrosis factor ; cellular response to type II interferon ; cytolysis in another organism ; defense response to bacterium ; defense response to Gram-positive bacterium ; defense response to protozoan ; positive regulation of pyroptosis" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MTQRVFQVWKGSNKFILGGRLIFGPDARSLPLTLLLIIVPVVLFCVFVARHLRHEFSPYNAGYAIMVVAILFTIYVLILLFFTSARDPGIVPRNSHPPEEDLRYETTVSADGRQTPSVQIPRTKEVIVNGVSVRVKYCDTCMLYRPPRCSHCSICNNCVERFDHHCPWVGQCIGLRNYRYFFMFVSSSTLLCIYIFSMSAVYIKILMDHQQATVWRAMKESPWAVVLMIYCFIALWFVGGLTAFHLYLISTNQTTYEKLRYRSSHSRSIVYNRGCPNNFLEVFCSKVKPSRNNFRAFIEEEPPRVITLPSTTRESGEAEDENVTRRQKVEDDLDIGDDLMNLSRRCNAEDANNNQPHHTLDIDHERAGSIRTEARHESWGRRSGSWDVAATDVRESRSYATAKDGRG", - "output": "endoplasmic reticulum ; Golgi apparatus ; plasma membrane ; protein-cysteine S-palmitoyltransferase activity ; peptidyl-L-cysteine S-palmitoylation ; protein targeting to membrane" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MRLWKSMAWGILLWHSQSGALCPAWPPARAAEEITRLQQQLADWNDIYWKQGVSAVDDSVYDQLSARLVQWQRCVGQDVSSTPVSPPLNGTTMHPVAHTGVRKLADRQAVEQWMRGRSELWVQPKVDGVAVTLVYQNGKLTRAISRGNGLQGEDWTPKIRLIPSIPQTTQGALANAVLQGEIFLQREGHIQQRMGGMNARSKVAGMLMRQDNASALNSLGIFIWAWPDGPANMPERLSQLAKAGFSLTNKYTLAVKDASEVERARQSWLTSALPFVTDGVVIRMAKEPASQHWRPGQGDWLAAWKYPPVAQVAQVSAIQFSVGKSGKITVVASLVPVILDDKRVQRVNIDSVKRWEAWDIAPGDQILVSLAGQGIPRLDEVVWRSRERSKPVPPDSHFNSLTCFYASETCQEQFISRLVWLGSRSALGLDGMGEASWRALHQTHRFKHIFSWLALTSAQIANTPGFAKGKSEQIWRQFNLARRQSFTRWIMAMDIPLTQAALQASGDRSWEQLLMRTEQHWWQLPATGERRAGRVIDWRNNPQIKTLSRWLAAQHIPGFGS", - "output": "DNA ligase (NAD+) activity ; DNA repair ; DNA replication" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MQFDWSAIWPAIPLLIEGAKMTLWISVLGLAGGLVIGLLAGFARTFGGWIANHVALVFIEVIRGTPIVVQVMFIYFALPMAFNDLRIDPFTAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRWETIRYVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVFYLIITLVLSFILRRLERRMKIL", - "output": "ATP-binding cassette (ABC) transporter complex ; transmembrane transporter activity ; amino acid transport" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MDIRAAEISAILKEQIKNFGKEAEVSEVGQVLSVGDGIARVYGLDNVQAGEMVEFPGGIRGMALNLESDNVGVVIFGADRDIKEGDVVKRTGAIVDVPVGPELLGRVVDALGNPIDGKGPIKAKERRRVDVKAPGIIPRKSVHEPMSTGLKAIDALIPVGRGQRELVIGDRQTGKTAIILDTFLNQKPIHDNGPDKDKLYCVYVAVGQKRSTVAQFVKVLEERGALEYSIVVAATASDPAPMQYLAPFAGCAMGEYFRDNGQHALIGYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNDENGAGSLTALPVIETQGNDVSAFIPTNVISITDGQIFLETNLFYQGIRPAVNVGLSVSRVGSSAQIKAMKQVAGSIKGELAQYREMAAFAQFGSDLDAATQRLLNRGARLTELLKQPQFSPLKTEEQVAVIYAGVNGYLDKLAVNQVGKFEEGLLASLRTEHKDVLEGIRNEKALTDDLKAKLKAAIDAFAKSFA", - "output": "plasma membrane ; proton-transporting ATP synthase complex, catalytic core F(1) ; ATP binding ; proton-transporting ATP synthase activity, rotational mechanism ; proton-transporting ATPase activity, rotational mechanism" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MTVGLLGGSFDPPHEGHVQISRAALKRFDLDQLWWLVTPGNPLKENPPASMTRRIKAAREIMDHPRVRISDIEARLNTRYTAQTLRELRKLYPQVRFVWLMGADNLAHFHRWKNWRGIMESVPVGVLARPGDRISARLSRAARIYSQHRIPAGQSHLLARASSPAWCFLNVPMTKASSTEIRKRGAWTG", - "output": "ATP binding ; nicotinate-nucleotide adenylyltransferase activity ; NAD biosynthetic process" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MLTLTPVLTVSYEAKISFLFLSVVEFAVGIMANAFIVLVNFWDMVKKQPLNNCDIALLCLSITRLFLQGLLLLDAIQLACFQQMKDPLSHNYQAILTLWMSANQVSLWLAACLSLLYCAKIVRFSHTFPLHLASWVSRRFLQMLLVALLFSGVCTALCLWDFFSRSHTVVTSMLHMNNTEFNLQIEKLNFFYSFVFCNVGSVPPSLVFLISSGVLVISLGNHMRTMKSQTRGSRDPSLEAHVRAIIFLVSFLCFYVVSFCAALISIPLLVLWHNKGGVMVCIGMMAACPSGHAAILISGNAKLKKVIVTILFWFQSRQKVRRVHKVLPRIL", - "output": "plasma membrane ; bitter taste receptor activity ; G protein-coupled receptor activity ; detection of chemical stimulus involved in sensory perception of bitter taste" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MNLTHINEEGRARMVDVSEKAETKREAVAIGSIYMKNETLRRIHEGTIKKGDVLAVAQVAGIMAAKNTSHMIPMCHPIMITGCDISFNLDFENSKIDIKAVVKTVGQTGVEMEALTAVTVAALTIYDMCKAIDRDMVISEIMLVKKSGGKSGLYEREV", - "output": "cyclic pyranopterin monophosphate synthase activity ; Mo-molybdopterin cofactor biosynthetic process" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MPDLKRAIGLMSGTSMDGIDIALLATDGENWIERRASASMDYSDGFRARLKAGLVDARAIKDRAERPGLLRQLEHDLTLLHAVAVHDFLHEQGLQPHEIDVIGFHGQTVLHRPNESLTVQIGDGALLARETGIPVVYDMRAEDMRHGGQGAPLIPAYHAALAANLPLGLKGPVVFVNIGGISNLTYVGEDGALIAYDSGPGNMLIDQWMELHGHGRFDPGGATAMSGSVDRNTAHRYLEHEFFKGNHRRSLDRGDFAIPAKGELNLADGARTLAFVSAAAILKSASHLPARPRTYVVSGGGRKNGALMDELTALAEREGAHVIDADNAGFDGDAMEAEAWAYLAVRSLCGLPLTYPSTTGCDKPVSGGVPVRP", - "output": "ATP binding ; kinase activity ; phosphotransferase activity, alcohol group as acceptor ; 1,6-anhydro-N-acetyl-beta-muramic acid catabolic process ; amino sugar metabolic process ; carbohydrate metabolic process ; peptidoglycan turnover ; phosphorylation" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MSYAIIETGGKQVRVEPGRFYDIERLDVDVDGNHTIEKVLLISDDNGVTVGQPYIDGATVEGTVVDQRRAKKVLVYKMLPKKKTRKKRGHRQYFTRFMIDSIKVGGNVVAAKADA", - "output": "cytoplasm ; ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAGINKTLEKYNSCCYNAQGSNSALAGGEHQSWYQEMSRLKTKLECLQRSQRHMLGEDLGPLSIKELQQLEKQLEYSLSQARQRKTQIMMEQVDDLRRKERQLGELNKQLKNKLEAEADSSNCRSAIQDSWVHGTVVSGGRVLNAQPPPDIDCEPTLQIGYYQFVRPEAANPRSNGGGGDQNNNFVMGWPL", - "output": "nucleus ; DNA-binding transcription factor activity, RNA polymerase II-specific ; protein dimerization activity ; RNA polymerase II cis-regulatory region sequence-specific DNA binding ; positive regulation of transcription by RNA polymerase II ; regulation of transcription by RNA polymerase II ; specification of floral organ identity" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MQDVINSEKLKFDAEVGKVLKLVIHSLYTNKDIFLRELVSNASDACDKLRYESLSNQDLIDQDSDFKIVISVDQDKNRLYISDNGIGMNRQDLIDNLGTIAHSGTQRFLDEINNGTSSQGVVELIGKFGVGFYSAFMVASEVIVESRKAGESIGYQWKSHGDGEFTISQLEDNQISRGTKITLILKPEESEFTDRFRIEHIITTYSYHINYPVYFLNDKGEEEKLNSDAAIWTKSKGEISAEEHQNFFRTVAHVGGEPWMILHNKNEGVVEYTNLLYIPSIKPFDLFHPDRKCSVKLYVNKVFITEDNVQIIPQYLRFLKGIIDSSDLPLNISRETLQNNKIIEKIKQSIVNRVLSELKKKAESDIKDYKKFWENFGSVLKEGLCESMNTEFREELMSACRFYSTYSDDSLISLEDYIERMKAGQDNIYYLTGNDLDSVKKSPQLEGFISRGIEVILLVDPVDDFWTNVVTDYQKVPLKSVIRADEDLEKLAHLDKSEEIKENEDESVDSKEKVDTFVKYAAQVLDKLVSSVRVSKKLTNSPVCLAVADGSMDIRMERFLREQKQLNYKSTKILEINPKHPIVTKMIDEHANAGESVTLENMLHLLLNQACILEGEELQDVSDFAERMNNILAKVYQ", - "output": "cytoplasm ; ATP binding ; ATP hydrolysis activity ; ATP-dependent protein folding chaperone ; unfolded protein binding" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MALQGWVQRGWRCGPAWAPPLGGGYRELSATQAPRLLGRRFNLFVQQKCGFRKAPRKVEPRRSDTGSSGEAYKRSALIPPLEETVFYPSPYPIRTLVKPFFFTIGFTGCAFGSAAIWQYESLKSRVQSYFDGIKADWLDSIRPQKEGNLRKEINKWWNSLSDGQRTVTGIIAANALVFCLWRVPSLQRTMIRYFTSNPASKVLCSPMLLSTFSHFSLFHMAANMYVLWSFSSSIVNILGQEQFVAVYLSAGVISNFVSYVCKVATGRYGPSLGASGAIMTVLAAVCTKIPEGRLAIIFLPVFTFTAGNALKAIIAMDTAGMILGWKFFDHAAHLGGALFGIWYITYGHELIWKNREPLVKIWHEIRTNGPKKGGGSK", - "output": "mitochondrial inner membrane ; mitochondrion ; nucleus ; endopeptidase activity ; serine-type endopeptidase activity ; membrane protein proteolysis ; mitochondrial fusion ; negative regulation of intrinsic apoptotic signaling pathway ; negative regulation of release of cytochrome c from mitochondria ; proteolysis ; regulation of autophagy of mitochondrion ; regulation of mitochondrion organization ; regulation of protein targeting to mitochondrion ; regulation of proteolysis ; regulation of reactive oxygen species metabolic process ; signal peptide processing" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MQKIRRDDEIIVIAGKDKGKRGKVLKVLADDRLVIGGVNLVKRHTKPNPMAGVQGGIVEKEAPLHASNVAIFNGETNKADRVGFKVEDGKKIRVFKSTQKAVDA", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "WYSSMFAANIKQEPISHHHHHHHAHHSHHAHDSNSNSNASSPHQSPLPSPNPPSHTNLQLEQYLKQQQQQQQQHQHQQQQQPMDTLCAAAMTPSPSNNDQNSLGWLVGLPNPMQTIMPANMRPSPTATTATAAAAAPTTTAAAIALQANDKLQALTPPMDVTPPKSPAKSQQSCAEPEKEHDLMSNSSEDMKYMA", - "output": "nucleus ; DNA binding ; metal ion binding ; segmentation" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MAAVSVYERPVGGFSFDNCRRNAILEADFAKKGYKLPTARKTGTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLISSNLELHSLSTGRLPRVVTANRMLKQMLFRYQGYIGAALVLGGVDVTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPEMEEEEAKQLVSEAIAAGIFNDLGSGSNIDLCVISKSKLDFLRPYSVPNKKGTRFGRYRCEKGTTAVLTEKVTALDIEVLEETVQTMDTS", - "output": "cytosol ; nuclear body ; nucleus ; proteasome core complex ; proteasome core complex, beta-subunit complex ; endopeptidase activity ; threonine-type endopeptidase activity ; proteolysis involved in protein catabolic process" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MAFPGPRVLVVGSGIAGLGAAQKLCSHRAAPHLRVLEATASAGGRIRSERCFGGVVELGAHWIHGPSQDNPVFQLAAEFGLLGEKELSEENQLVDTGGHVALPSMIWSSSGTSVSLELMTEMARLFYGLIERTREFLNESETPMASVGEFLKKEISQQVASWTEDDEDTRKRKLAILNTFFNIECCVSGTHSMDLVALAPFGEYTVLPGLDCILAGGYQGLTDRILASLPKDTVAFDKPVKTIHWNGSFQEAAFPGETFPVLVECEDGARLPAHHVIVTVPLGFLKEHQDTFFEPPLPAKKAEAIKKLGFGTNNKIFLEFEEPFWEPDCQFIQVVWEDTSPLQDTALSLQDTWFKKLIGFLVQPSFESSHVLCGFIAGLESEFMETLSDEEVLLSLTQVLRRVTGNPQLPAAKSVRRSQWHSAPYTRGSYSYVAVGSTGDDLDLMAQPLPEDGTGTQLQVLFAGEATHRTFYSTTHGALLSGWREADRLVSLWDSQVEQSRPRL", - "output": "peroxisomal matrix ; N(1),N(12)-diacetylspermine:oxygen oxidoreductase (3-acetamidopropanal-forming) activity ; N1-acetylspermidine:oxygen oxidoreductase (3-acetamidopropanal-forming) activity ; N1-acetylspermine:oxygen oxidoreductase (3-acetamidopropanal-forming) activity ; polyamine oxidase activity ; spermidine:oxygen oxidoreductase (3-aminopropanal-forming) activity ; spermine:oxygen oxidoreductase (spermidine-forming) activity ; polyamine catabolic process ; positive regulation of spermidine biosynthetic process ; putrescine biosynthetic process ; putrescine catabolic process ; spermidine catabolic process ; spermine catabolic process" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MDLISFKEKDISKKECLELFLDTENFFDILKVADDIRKESVGDTVTYVLNANINFTNVCSGTCKFCAFKTEKEDPNSFFLNPDKVAEKALLARKTGATEVCIQGGLLPEIDTYFQAEILQKVKKITEKYGGIDIHAFSPMEVKSAAENCGLNVKEALKILKDSGLKTMPGTAAEILNDEIRNEICPTKLTTSEWIDVVKTAHKNGIKTTCTMMYGHIEENVHLVEHLSILKEIQKETSGFTEFVPLTFLHENAPLHHIGKVKSGASGILDLKVYAISRIFFKNYLKNIQTSWVKLGIKLSQISLNCGANDVGGTLMEESISKAAGGSFGTCMSEEKLKNMILNVNKIPKKRNTLYELIN", - "output": "4 iron, 4 sulfur cluster binding ; 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase activity ; iron ion binding" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MLTFIELLIGVVVIVGVARYIIKGYSATGVLFVGGLLLLIISAIMGHKVLPSSQASTGYSATDIVEYVKILLMSRGGDLGMMIMMLCGFAAYMTHIGANDMVVKLASKPLQYINSPYLLMIAAYFVACLMSLAVSSATGLGVLLMATLFPVMVNVGISRGAAAAICASPAAIILAPTSGDVVLAAQASEMSLIDFAFKTTLPISIAAIIGMAIAHFFWQRYLDKKEHISHEMLDVSEITTTAPAFYAILPFTPIIGVLIFDGKWGPQLHIITILVICMLIASILEFLRSFNTQKVFSGLEVAYRGMADAFANVVMLLVAAGVFAQGLSTIGFIQSLISIATSFGSASIILMLVLVILTMLAAVTTGSGNAPFYAFVEMIPKLAHSSGINPAYLTIPMLQASNLGRTLSPVSGVVVAVAGMAKISPFEVVKRTSVPVLVGLVIVIVATELMVPGTAAAVTGK", - "output": "plasma membrane ; antiporter activity ; C4-dicarboxylate transmembrane transporter activity" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MNLGTLVSETRNPQTMDLDALPTPELVKRFNEQDTLVAEAVKATLPDVARAVDAAAAALKSGGRIIYMGAGTSGRLGVLDASECPPTFGVPHGLVVGLIAGGPGALLKAVEGAEDCQQAGEDDLVALNLQEQDLVVGLAASGRTPYVIGGLRYARQSGCTTVAVSCNPDSPIAREANIAISPVVGPEALTGSTRLKSGTAQKMVLNMISTGAMVKFGKVYQNLMVDMKATNVKLVDRACRMVVEATGIGREEAEALLKQTDFEVKPAILMALTGLDAAAAREKLAAHQGFLRAALEH", - "output": "carbohydrate derivative binding ; carbon-oxygen lyase activity ; 1,6-anhydro-N-acetyl-beta-muramic acid catabolic process ; amino sugar catabolic process ; carbohydrate metabolic process ; N-acetylmuramic acid catabolic process ; peptidoglycan turnover" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MTEKKNRREKKNPREAKITFEGLVMEALPNGMFRVRLENDTIILGYISGKIRSSSIRILMGDRVKIEVSRYDSSKGRIIYRLPHKDSKRTEDSKDTEDLKDTKDSKG", - "output": "chloroplast ; plastid ; ribosome binding ; rRNA binding ; translation initiation factor activity" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANIDIGSLICNVGAGGGAPAAAAPAGGAAPAGGGAAPAEEKKEEEKKEESEESDDDMGFGLFD", - "output": "cytosolic large ribosomal subunit ; protein kinase activator activity ; ribonucleoprotein complex binding ; structural constituent of ribosome ; cytoplasmic translation ; translational elongation" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MFSKSGMSDLMKHAQRMQEQMQQMQGEIAKLEVNGESGAGLVKVTINGVYHCRRVEIDSSLLQDDKDMLEDLITAAFNDAVRRITEIKKDKMTSLSSSLQMPLGFNWNMPFL", - "output": "bacterial nucleoid ; cytoplasm ; DNA binding" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MTNSSLRPSGRRADQLRDVRITRHYTKHAEGAVLVEFGDTKVICTASVAERVPEFLRERGQGWLTAEYGMLPRATHTRSDREAARGKQTGRTQEIQRLIGRALRAVFDLNALGPRTLHLDCDVIQADGGTRTASITGAFVAAHDAVTKLVAAGRIARSPITDYVAAISVGVFGGTPVLDLDYDEDSACDTDMNVVMTGAGGFVEVQGTAEGAPFSRTEMNALLDLAQAGIGELVRLQRAALEA", - "output": "3'-5'-RNA exonuclease activity ; phosphate-dependent exonuclease activity ; tRNA binding ; rRNA catabolic process ; rRNA processing ; tRNA processing" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MAAAGDVILEDVPGSVNLFNTLQDQITKVTAHVQDLTQKVRSGIYNTDKGLSFLELKDQLLLFYLQDLTHLMLEKTNGKSIKGNPGILRLVELRTVLEKMRPIDQKLKYQIDKLVKAAVTGSLGENDPLRFKPNPQNLMSKLSEPDERESDSGEEGAEGGVAKKPQSKVKRYIPPRLAPVHYDDTEAEREHRIVERAKKLALSSSTIRELKEQYSDAPEEIREGRAYHMMRHDKEEQHRINHEESMMVRLNMTRKEKARKKRVLSMTSQLNSLTHFSDISALTGGEGRAEDMVPSMKKSKKGPKKSKKKKGFSRRRH", - "output": "cytoplasm ; nucleus ; small-subunit processome ; regulation of translation ; ribosomal small subunit biogenesis" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MSSGAASGTGRGRPRGGGPGPGDPPPSETHKLVVVGGGGVGKSALTIQFIQSYFVSDYDPTIEDSYTKICSVDGIPARLDILDTAGQEEFGAMREQYMRAGHGFLLVFAINDRQSFNEVGKLFTQILRVKDRDDFPVVLVGNKADLESQRQVPRSEASAFGASHHVAYFEASAKLRLNVDEAFEQLVRAVRKYQEQELPPSPPSAPRKKGGGCPCVLL", - "output": "extracellular exosome ; focal adhesion ; plasma membrane ; GDP binding ; GTP binding ; GTPase activity ; protein-containing complex binding ; face morphogenesis ; leukocyte differentiation ; negative regulation of Schwann cell migration ; positive regulation of angiogenesis ; positive regulation of endothelial cell migration ; positive regulation of endothelial cell-matrix adhesion via fibronectin ; positive regulation of vasculogenesis ; Ras protein signal transduction ; regulation of ERK1 and ERK2 cascade ; regulation of protein kinase B signaling ; Schwann cell migration" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MGRMTATPARRVLLAAPRGYCAGVDRAVIAVEKALEQYGAPIYVRHEIVHNKYVVQTLEKKGAIFVDVTAEVPEGSIVMFSAHGVAPTVHAEAAERKLATIDATCPLVTKVHKEAVRYAKDDYDILLIGHEGHEEVIGTSGEAPDHIQLVDGPEDVANVEVRDESKVVWLSQTTLSVDETMETVDALKSKFPNLLSPPSDDICYATQNRQIAVKKLAEDAELVIVVGSKNSSNSIRMVEVALDAGAPAAHLVDFASEIDEAWLEGVTTVGLTSGASVPDVLVDGVLEWLGERGYADVETVKTADESITFSLPKELRRDLRAEAAALSAE", - "output": "4 iron, 4 sulfur cluster binding ; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity ; metal ion binding ; dimethylallyl diphosphate biosynthetic process ; isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway ; terpenoid biosynthetic process" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MPGFTCCVPGCYSNSHRDKGLHFYTFPKDPELRCLWLKNVSRGGVSGCFSTFQPTNGHRVCSLHFQGGRKSYSIKVPTIFPLRGVNEKRTRRSSTKKRQQPNYTPAATTVLVTGLPGQEEQEVLELTAGGAEMMLLGTTAGMGAAIADVEGSSAVMGATIDAMATAAEGGSAAASNIAVKLDVGETHAVNTHFSTDASHGSHQQLQVVVVGDEPYPSADCWPSPLCSDHSYSMSSGTTTEELLRKLNEQRDIIALMEVKMKEMKSSIKHLKVTEVKLREELRQKDKDKVSPMIKSN", - "output": "nucleus ; DNA binding ; zinc ion binding" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MKTELKAVLKRPKISEKFDELREKKEGALIGYVMAGDPTFEASSEVVKALAKGGADIIELGFPFSDPVADGPTIQVAGQRALAEGMDIERYFAFARALEVDVPLVCMTYYNPVFRYGVEKFVENAAEAGISGLIIPDIPVEEAADLKTGCDAHGLDLIFLVAPTTTEARIRKILQRGSGFIYLVSRLGVTGARDDVAGSTKELLSRVNTDIPKAVGFGISTGEQAAEVRKAGADGVIVGSAFVRIIEEGTDVNERLETLARELKSGMLEAN", - "output": "tryptophan synthase activity" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MTDAKMKKKRTTPFLYLASIVFLPWWISLFFKKSLESWVTNWLNISQSEPFLNDIQEKSLIEKFIELEELLLLDEMIKECPKLDLQKFRIGIHKETIQLMNMYNDDRIHTILHFSTNIISFVILSVCSILGNEELVILNSWIKEFLYNLSDTLKAFCLLALTDFLFGFHTISAWELLIGSVVHNDQMRSLLVCLFPSVLHTIYYFWTFNYLNCVSPSLVVLYDSLVDVD", - "output": "chloroplast inner membrane ; proton transmembrane transporter activity" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTRNYENKEGQRVYVTEVVADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIELNDDDLPF", - "output": "single-stranded DNA binding ; DNA recombination ; DNA repair ; DNA replication" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MADINAYEGPAEAGFGDYVALLKPRVMSLVVFTAFVGLWIAPQPVNPFVAFCAVLFIALGGGASGALNMWYDADIDAVMRRTAGRPVPSGRVTSQEALAVGIALSGLSVMMLGLAANWFAAGFLAFTIFFYAVVYTIWLKRSTPQNIVIGGAAGAFPPMIGWACATGGIGIESLLMFALIFFWTPPHFWALALFMKDDYSKAGVPMLTVTHGRKVTRCHIFAYTLVLAPFALWLGFTSVGGPLYLAVSVVLNALFIAGGWQILRRSEDQAQADGYRVEKRYFRLSLYYTFLHFLALLVQHWVGGW", - "output": "plasma membrane ; protoheme IX farnesyltransferase activity ; heme O biosynthetic process" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MVEYYEVLGVQRNASADDIKKAYRRLALKWHPDKNPDNKDEAERRFKEVAEAYEVLSDSKKRDIYDKYGKEGLTNRGGGSHFDEAPFQFGFTFRSPDDVFRDFFGGRDPFSFDLFADDPFDDFFGRSRHRANRSRPAGGGGGPFLSTFGGFPAFGPSFSPFDSGFSSSFGSFGGHGGHGGFTSFSSSSFGGSEMGNFRSVSTSTKVVNGRRVTTKRIVENGQERVEVEEDGQLKSLTVNGKEQLLRLDNK", - "output": "nucleus ; perinuclear region of cytoplasm ; Hsp70 protein binding ; unfolded protein binding ; chaperone-mediated protein folding" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MDDLANLVFPGQQVAVTWDGSSSTEALKEFVSKLQEVVAPRGKVSVENIERLLLSAHADSSFDAILLGMVQGTQCIHSSEVLAEVARILKPGGALIIQEPVAAGAGAQLRTPEHLSSVLKLSGLTEVTQLLQEPLNPEQKQGVVELLGYNGNDVSTIRIRAKKPNYEVGSSRQLSLPKRKTAEKPSVDPAAAKLWTLSASDMNDDDVDILDSDELLDQEDLKKPAPSSLLASGCGEGSEKKRKACKNCTCGLAEELEAEKTPSTVPKAAPSACGNCYLGDAFRCASCPYLGMPAFKPGEKVLLNPTKLQDA", - "output": "mitochondrial intermembrane space ; nucleus ; 2 iron, 2 sulfur cluster binding ; 4 iron, 4 sulfur cluster binding ; electron transfer activity ; metal ion binding ; methyltransferase activity ; apoptotic process ; hemopoiesis ; iron-sulfur cluster assembly ; negative regulation of apoptotic process" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MATSQRKILVTSALPYANGPIHLGHMLEYIQTDIWSRYQKLRGHECHYICADDAHGTPIMLKAQQLGLAPEEMIAQVNKEHQQDFADFNIAFDNYHSTHSDENRVLASDIYLKLRTNGYIKSKSISQLFDPEKSMFLPDRFVKGTCPKCKSPDQYGDNCDACGATYSPTELINPKSAVSGATPVMKDTEHFFFDLPAFEGMLKEWTRSGALQTEMANKLDEWFEQGLQQWDITRDAPYFGFEIPDAPGKYFYVWLDAPIGYMGSFKNLCDKRPELSFDEFWAKDSKAEVYHFIGKDIVYFHSLFWPAMLHGSGYRQPNSVYAHGYVTVNGAKMSKSKGTFIKARTYLDHLDPEYLRYYYAAKLSSRIDDLDLNLEDFAQRVNSDLVGKLVNLASRTAGFITKRFDGKLAKIADTTLTEAFLAKQEQIAEFYETREYGKAMREIMALADIANGFVADAAPWQMVKQDDQQEAAHQVCSNALNLFRILVTYLKPVLPRLAQDVEAFFQQTLTWDGLAQDMAGHEISPFKAMMQRVELDKVNAMVADSKENLQVTADVPKTAKPEKTVESSNVSSEPLVDDPISETINFDDFAKIDLRIARIVKAEHVAEADKLLKLQLDIGGETRQVFAGIKSAYSPEDLEGKLTVMVANLAPRKMRFGMSEGMVLAAGPGGSDLWILEPHEGAQPGMRVK", - "output": "cytoplasm ; ATP binding ; metal ion binding ; methionine-tRNA ligase activity ; tRNA binding ; methionyl-tRNA aminoacylation" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MIWHVQNENLILDSTRIFMKAFHLPLFDGSFIFPEGILIFGLILLLMIDSTSDQTDIPWFYFISSISLVMSITALLFRWREEPRILFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLINTQMYNSPGISIALIFITVGIGFKLSPAPSHQWTPDVYEGSPTPVVAFLSVTSKVAASASATRIFDIPFYFSSNEWHPLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDANGGYASMITYMLFYISMNLGTFACIVLFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFWCGWQAGLYFLVSIGLFTSVVSIYYYLKIIKLLMTGRKQEITPHVRNYRRSPLRSNNSIELSMIVCVIASTIPGISMNPIIAIAQDTLF", - "output": "chloroplast thylakoid membrane ; NADH dehydrogenase (ubiquinone) activity ; quinone binding ; ATP synthesis coupled electron transport ; photosynthesis, light reaction" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MGGHLSPWPTYTSGQTILQNRKPCSDDYRKRVGSCQQHPFRTAKPQYLEELENYLRKELLLLDLGTDSTQELRLQPYREIFEFFIEDFKTYKPLLSSIKNAYEGMLAHQREKIRALEPLKAKLVTVNEDCNERILAMRAEEKYEISLLKKEKMNLLKLIDKKNEEKISLQSEVTKLRKNLAEEYLHYLSERDACKILIADLNELRYQREDMSLAQSPGIWGEDPVKLTLALKMTRQDLTRTQMELNNMKANFGDVVPRRDFEMQEKTNKDLQEQLDTLRASYEEVRKEHEILMQLHMSTLKERDQFFSELQEIQRTSTPRPDWTKCKDVVAGGPERWQMLAEGKNSDQLVDVLLEEIGSGLLREKDFFPGLGYGEAIPAFLRFDGLVENKKPSKKDVVNLLKDAWKERLAEEQKETFPDFFFNFLEHRFGPSDAMAWAYTIFENIKIFHSNEVMSQFYAVLMGKRSENVYVTQKETVAQLLKEMTNADSQNEGLLTMEQFNTVLKSTFPLKTEEQIQELMEAGGWHPSSSNADLLNYRSLFMEDEEGQSEPFVQKLWEQYMDEKDEYLQQLKQELGIELHEEVTLPKLRGGLMTIDPSLDKQTVNTYMSQAFQLPESEMPEEGDEKEEAVVEILQTALERLQVIDIRRVGPREPEPAS", - "output": "cytoplasm ; perinuclear region of cytoplasm ; cell differentiation ; spermatogenesis" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MWGAFLLYVSMKMGGTAGQSLEQPSEVTAVEGAIVQINCTYQTSGFYGLSWYQQHDGGAPTFLSYNALDGLEETGRFSSFLSRSDSYGYLLLQELQMKDSASYFCAVR", - "output": "T cell receptor complex ; adaptive immune response ; response to bacterium" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MSKPQSDADRRKQISVRGIAEVGNVTEVKKNFNRHLHYTLVKDRNVSTLRDYYFALANTVKDNMVGRWIRTQQHYYEKDPKRVYYLSLEYYMGRSLTNTMINLGIQSECEEAMYQLGLDIENLEEMEEDAGLGNGGLGRLAACFLDSMATLGLAAYGYGIRYEYGIFAQKIKNGEQVEEPDDWLRYGNPWEKARPEFMLPVNFYGRVIDTPEGKKWVDTQRVFAMPYDNPIPGYNNNHVNTLRLWSAKSPIDFNLKFFNDGDYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFMCAATLQDIIRRYKASKFGSREAVRNTFDHFPDKVAIQLNDTHPSLAIPELMRILVDEEHLTWEKAWDITVRSCAYTNHTVLPEALERWPVSLLESILPRHLQIIYHINFLHMENVKKKFPDDLDRMRRMSMVEEDGEKRINMAHLSIVGSHAVNGVAAIHSQILKDSLFHDFYEMEPQKFQNKTNGITPRRWLLLCNPGLSDLIAEKIGDEWPVHLDQLVALKKWAKDPNFQRNVARVKQENKLKLAAILEKDYGVKINPSSMFDIQVKRIHEYKRQLLNCLHIITLYNRIKKDPTANFTPRTIMIGGKAAPGYYVAKQIIKLICAVGNVVNNDPIVGDKLKVIFLENYRVTLAEKIMPAADLSEQISTAGTEASGTGNMKFQLNGALTIGTLDGANVEMAEEMGLDNIFIFGMTVDEVEALKKKGYNAYDYYNANPEVKQVIDQIQGGFFSPGNPNEFKNIADILLKYDHYYLLADYDAYIKAQDLVSKTYQNQAKWLEMSINNIASSGKFSSDRTIAEYAREIWGVEPTWEKLPAPEDQPQN", - "output": "cytoplasm ; protein-containing complex ; glycogen phosphorylase activity ; linear malto-oligosaccharide phosphorylase activity ; protein homodimerization activity ; pyridoxal phosphate binding ; SHG alpha-glucan phosphorylase activity ; defense response to Gram-negative bacterium ; determination of adult lifespan ; glycogen catabolic process ; insulin receptor signaling pathway ; negative regulation of innate immune response ; positive regulation of glycogen catabolic process" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MASYVAAIDQGTTSTRCMIFNHSGRVVAVDQVEHRQIFPRAGWVEHDPEEIWSNTRQVCAGALAKADLVTSEIAAVGITNQRETTVVWDRKTGKPVYNAIVWQDTRTDSIVNELAADGGQNRYHRKTGLPLATYFSGTKIRWILDNVDGVRARAEKGELLFGNMDTWVLWNSTGGPDGGLHVTDPTNASRTLLMDLETLDWDTDICAEFGIPTSMLPEIRSSSEVYGHFRERGVFGGLPIAGILGDQQAATFGQACLSPGEAKNTYGTGNFLLLNTGTERVLSENGLLTTVGYKIGGNDTVYCLEGSIAVTGSLVQWLRDNLGLIASAPEIEQLARTVDDNGGAYFVPAFSGLFAPHWRSDARGAIVGLTRFVDRGHLARAVLEATAFQTREVIEAMNADSGVPLKSLKVDGGMVGNELLMQFQADILGVPVIRPVVSETTALGAAYAAGLAVGFWGSEEDIRSNWAKDKQWDPLMPEEKREAEYRQWQKAVTKTFDWVE", - "output": "ATP binding ; glycerol kinase activity ; glycerol catabolic process ; glycerol metabolic process ; glycerol-3-phosphate metabolic process ; phosphorylation" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MSEELQPVFSIERLYVKDLSLEVPHAPQIFLEQGDPEVDMRVSTGSQKLEDGYYDVDVTVTVTAKLDNERTMFLNEVTQSGIFRLENIPEEDVQLLLGVACPNILFPYAREAVSGTVTRAGFPPVLLAPINFEAIYQQQQEAEAAGA", - "output": "cytoplasm ; unfolded protein binding ; protein folding ; protein tetramerization ; protein transport" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MTHVEIRHAMDPVSARQLDTAGLREAFHMGDLFRSGEIRLVYTHYDRMIVGGAVPAGEPLVLDEVKPTGTASILDRREMGVVNVGAAGTVSAGGESWEMGRGDVLYLPMGAGPVTFAGEGRFYILSAPAHTAHPARLVKLEDAKKVKLGSPETANERTINQFIHPEVMQSCQLVVGYTQFHGGSVWNTMPAHVHDRRMEAYLYFDLAEEARVFHFMGEPSETRHLVMRNEEAVVSPPWSIHCGCGTGSYTFVWAMAGDNVDYRDVEMVAMEDLR", - "output": "4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase activity ; zinc ion binding ; pectin catabolic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MHIKKGDKVIVITGKDKGKTGTVIEALPKRDRVVVEGVNIVKKHQKPTQMNPEGGITEFEAAIHVSNVMLLDPKTNKPTRVGTKIEDGKKVRVAKKSGEIIK", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MFNNNSNNGNSNGNRGYNNNNRNNERSQGYNQNIEQQLASQEKKTAYRRTVDHGNNMGRWYINRSLGIDDQPIGKIRPESSYLIDLLPSPAYASNSVRENKNNMSIMDIQTKFVHLSSNKAKHSINTVKWTPEGRRLLVASHSGEFTVWNGMTFNFETIMQAHDSAILSLKYSHNDEWLLSGDQSGVIKYWQTNFNNVNIINGHSDGIRDIAFSPNDSKFLTCSDDSTMKIWNFNNGQEERSLVGHHWDVKSADWHPNLGLIVSGSKDNLIKLWDPRASSCVSTLHGFKHTITKTKFQPTGTKRLLASVSRDKSCRIFDLRTMKDILVIRDHETDLSCVEWHPVHPSMITTAAYDGSMNHYIMDSYISDNNIKNDSNNNSTSPIEASHKIPYAHEKAIHALEYHPLGHLLCSAGADRSARFWSRARPNDPMSFQDALYTNDKVGAWYYGVNNNINAVIEPSTASVNKDDPSSAQAINLPGLNNLPNGNESTTNGWGNIPGLRGH", - "output": "nucleus ; chromosome segregation ; mRNA 3'-end processing" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MLPSDLVKYKKNSQKIIALTAWDSISGSIAEQANVDLVLVGDSLAMVCLGYKSTLPLTLGNIIYHTNAVSRGFKKNIEEQPLVIADMPFLTYQCGEDKAVEYAGKIIQSTYAKAVKIEGAEPEIQKVISRLIRMGIPVMGHIGLTPQSYLNLGLKKQGESLESQEKIKKEASILEKLGCFSIVLEHIPDLLAKEIQNTLTIPTIGIGAGNYCDGQVRVTADLLGLNDDQPPFCQPIIQGKELFMKKLKEWVESERLN", - "output": "cytoplasm ; 3-methyl-2-oxobutanoate hydroxymethyltransferase activity ; metal ion binding ; pantothenate biosynthetic process" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MFDTVLVANRGEIAVRVIRTLRRLGIRSVAVYSDPDVDARHVLEADAAVRLGPAPARESYLDIGKVLDAAARTGAQAIHPGYGFLAENADFAAACERARVVFLGPPARAIEVMGDKIAAKNAVAAFDVPVVPGVARAGLTDDALVTAAAEVGYPVLIKPSAGGGGKGMRLVQDPARLPEALVSARREAMSSFGDDTLFLERFVLRPRHIEVQVLADAHGNVVHLGERECSLQRRHQKVIEEAPSPLLDPQTRERIGVAACNTARCVDYVGAGTVEFIVSAQRPDEFFFMEMNTRLQVEHPVTEAITGLDLVEWQLRVGAGEKLGFAQNDIELRGHAIEARVYAEDPAREFLPTGGRVLAVFEPAGPGVRVDSSLLGGTVVGSDYDPLLTKVIAHGADREEALDRLDQALARTAVLGVQTNVEFLRFLLADERVRVGDLDTAVLDERSADFTARPAPDDVLAAGGLYRQWALARRAQGDLWAAPSGWRGGGHMAPVRTAMRTPLRSETVSVWGPPESAQVQVGDGEIDCASVQVTREQMSVTISGLRRDYRWAEADRHLWIADERGTWHLREAEEHKIHRAVGARPAEVVSPMPGSVIAVQVESGSQISAGDVVVVVEAMKMEHSLEAPVSGRVQVLVSVGDQVKVEQVLARIKD", - "output": "ATP binding ; biotin carboxylase activity ; metal ion binding ; leucine catabolic process" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MTSRKYFGTDGIRGRVGQFPITPEFMLKLGWAAGMAFRKMGACRILVGKDTRISGYMFESALEAGLSAAGADVLLLGPMPTPAIAYLTRTFHAEAGIVISASHNPHYDNGIKFFSGQGTKLPDEIEMMIEELLDAPMTVAESENLGKVSRINDAAGRYIEFCKSSVPTSTDFAGLKVVIDCAHGATYKVAPNVFRELGAQVVVLSAQPDGLNINKDCGSTHMEALQAAVLAEHADMGIGFDGDGDRVLMVDHTGTIVDGDELLYIIARDLHERGRLQGGVVGTLMSNLGLELALAEQGIPFVRANVGDRYVIAELLERNWQIGGENSGHIVCFQHATTGDAIIASLQVILALRRSGVSLAEARLKLRKCPQILINVRFAGSGVDPVSHPSVKEACARVTEQMAGRGRVLLRKSGTEPLVRVMVEGEDETQVRAYAEELAKLVTEVCA", - "output": "magnesium ion binding ; phosphoglucosamine mutase activity ; carbohydrate metabolic process" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MNDSEFHRLADQLWLTIEERLDYWDGDSDIDCEINGGVLTITFENGSKIIINRQEPLHQVWLATKQGGYHFDLKGDEWICDRSGETFWDLLEQAATQQAGETVSFR", - "output": "cytoplasm ; ferric iron binding ; iron-sulfur cluster assembly" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MKIRLDKSLPGGEIAVPSSKSYTIRGLIAAAQANGQSRIISPLAADDTLASRQVLSGLGIDINTDAEAESWQLTGNTFKKPAGNLFCRESAATLRFMSAVCARLPFECRLLAGHSLMRRPMLPLIQALHQLGIEIETRGNTTVIKGGEITRSKVSLPGNISSQYVSALMLMAPACKSGLEIHLATPPASLPYLKMTKQTLESFGIKAYTSIDWQEISIPPQPYLPARYRVEGDWSSASSFLALGAIAAPLFISNLDTESFQADRIMIKFLSEMGAEVESGQNWVKVSPKPLTAIQADLTHSIDLLPALAITAACAKGQSILSGVRQARIKESNRIRAVSQGLSAMGINVTEEDDRLIIEGGMPRGAEIDSLGDHRIAMAFGALGAVTGETCISEAECVSKTYPDFWQKLESLGGKVIKDV", - "output": "cytoplasm ; 3-phosphoshikimate 1-carboxyvinyltransferase activity ; amino acid biosynthetic process ; aromatic amino acid family biosynthetic process ; chorismate biosynthetic process" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MTVKLDFEECLKDSPRFRASVELVEAEVSELETRLEKLLKLGNGLLESGRHYLAASRAFIVGICDLAHLGPPEPMMAECLDKFTQSLSHKLDSHAELLDATQHTLQRQIQTLVKEGLRSFREAGRDFWRGAESLEAALTHNAEVPRRRAQEAEEAGAALKVARAGYRGRALDYALQINVIEDKRKFDIMEFVLRLVEAQATHFQQGHEELSQLAQYRKELGGQLHQLVLNSAREKRDMEQRHVLLKQKELGGEEPEPSLKEGPGGLVMEGHLFKRASNAFKTWSRRWFTIQSNQLVYQKRYKDPVTVVVDDLRLCTVKLCPDSERRFCFEVVSPSKSCLLQSDSERLMQLWVSAVQSSIATAFSQARLDDSPRGLGQGSGHLAISSAATLGPGGLTRGREPGGVGHVAAQVQSVDGNAQCCDCREPAPEWASINLGVTLCIQCSGIHRSLGVHFSKVRSLTLDSWEPELVKLMCELGNVVINQIYEARVEAMAVKKPGPSCSRQEKEAWIHAKYVEKKFLTKLPEIRGRRGGRGPPRGHPPVPPKPGLIRPKPGSFRSKPEPPSEDLQSLHPGALLFRAAGHPPSLPTMADALAHGADVNWVNGGQENATPLIQATAAVRVLNSLLACEFLLQNGANVNQVDNQGRGPLHHATILGHTGLACLFLKRGADLGVRDSEGRDPLTIAVETANADIVTLLRLAKMREADAAQGQAGDETYLDIFRDFSLMASDDPEKLSRRSHDLHTL", - "output": "recycling endosome membrane ; GTPase activator activity ; metal ion binding ; signal transduction" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MTIPATILDTARTQVLEQGIGLNQQQLMEVLTLPEEQIPDLMELAHQVRLKWCGEEIEVEGIISLKTGGCPEDCHFCSQSGLFESPVRSVWLDIPNLVEAAKQTAKTGATEFCIVAAVKGPDERLMTQLEEAVLAIHSEVEIEVAASIGTLNKEQVDRLAAAGVHRYNHNLETARSYFPEVVTTHTWEERRETLRLVAEAGMEVCSGGILGMGETLEQRAEFAVQLAELDPHEVPMNFLDPRPGTPFADRELMDSRDALRSIGAFRLAMPHTMLRFAGGRELTLGDKGSEQALLGGINAMIVGNYLTTLGRPMEDDLDMMDRLQLPIKVLNKVI", - "output": "2 iron, 2 sulfur cluster binding ; 4 iron, 4 sulfur cluster binding ; biotin synthase activity ; iron ion binding ; biotin biosynthetic process" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "GPNGKSQSIIVGPWGDRVTN", - "output": "carbohydrate binding" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MSSDQEMAVFGEAAPYLRKSEKERIEAQNKPFDAKTSVFVADPKESFVKATVQSREGGKVTAKTEAGATVTVKEDQVFPMNPPKFDKIEDMAMMTHLHEPAVLYNLKERYAAWMIYTYSGLFCVTVNPYKWLPVYNAEVVTAYRGKKRQEAPPHIFSISDNAYQFMLTDRENQSILITGESGAGKTVNTKRVIQYFATIAVTGEKKKEEPTSGKMQGTLEDQIISANPLLEAFGNAKTVRNDNSSRFGKFIRIHFGTTGKLASADIETYLLEKSRVTFQLKAERSYHIFYQIMSNKKPELIEMLLITTNPYDYAYVSQGEITVPSIDDQEELMATDSAIEILGFTSDERVSIYKLTGAVMHYGNLKFKQKQREEQAEPDGTEVADKAAYLQGLNSADLLKALCYPRVKVGNEFVTKGQTVEQVYNAVGALAKAVYDKMFLWMVARINQQLDTKQPRQYFIGVLDIAGFEIFDFNSLEQLCINFTNEKLQQFFNHHMFVLEQEEYKKEGIEWEFIDFGMDLAACIELIEKPMGIFSILEEECMFPKATDMSFKNKLYEQHLGKSNNFQKPKPAKGKAEAHFSLIHYAGTVDYNITGWLDKNKDPLNETVVGLYQKSSVKTLALLFSGPASGEAEGGPKKGGKKKGSSFQTVSALFRENLNKLMTNLRSTHPHFVRCIIPNETKTPGAMEHELVLHQLRCNGVLEGIRICRKGFPSRILYADFKQRYKVLNASAIPEGQFIDSKKASEKLLASIDVDHTQYKFGHTKVFFKAGLLGLLEEMRDEKLAQLITRTQARCRGFLARVEYQKMVERRESIFCIQYNVRAFMNVKHWPWMKLYFKIKPLLKSAETEKEMANMKEEFEKTKEELAKSEAKRKELEEKMVTLTQEKNDLQLQVQSEADALADAEERCDQLIKTKIQLEAKIKEVTERAEDEEEINAELTAKKRKLEDECSELKKDIDDLELTLAKVEKEKHATENKVKNLTEEMAGLDETIAKLTKEKKALQEAHQQTLDDLQAEEDKVNTLTKAKTKLEQQVDDLEGSLEQEKKLRMDLERAKRKLEGDLKLAQESTMDIENDKQQLDEKLKKKEFEMSNLQSKIEDEQALAMQLQKKIKELQARIEELEEEIEAERASRAKAEKQRSDLSRELEEISERLEEAGGATSAQIEMNKKREAEFQKMRRDLEEATLQHEATAAALRKKHADSVAELGEQIDNLQRVKQKLEKEKSEMKMEIDDLASNMETVSKAKGNLEKMCRALEDQLSELKTKEDEQQRLINDLTTQRARLQTESGEFSRQLDEKDALVSQLSRGKQAFTQQIEELKRQLEEEIKAKSALAHALQSARHDCDLLREQYEEEQEGKAELQRAMSKANSEVAQWRTKYETDAIQRTEELEEAKKKLAQRLQDAEEHVEAVNAKCASLEKTKQRLQNEVEDLMIDVERTNAACAALDKKQRNFDKILSEWKQKYEETHAELEASQKESRSLSTELFKIKNAYEESLDQLETLKRENKNLQQEISDLTEQIAEGGKRIHELEKVKKQVEQEKSEIQAALEEAEASLEHEEGKILRIQLELNQVKSEIDRKIAEKDEEIDQLKRNHIRIVESMQSTLDAEIRSRNDAIRLKKKMEGDLNEMEIQLNHANRMAAEALKNYRSTQAILKDTQIHLDDALRGQEDLKEQLAMVERRANLLQAEIEELRATLEQTERSRKIAEQELLDASERVQLLHTQNTSLINTKKKLETDITQIQGEMEDIIQEARNAEEKAKKAITDAAMMAEELKKEQDTSAHLERMKKNLEQTVKDLQHRLDEAEQLALKGGKKQIQKLEARVRELEGEVESEQKRNVEAVKGLRKHERRVKELTYQTEEDRKNILRLQDLVDKLQAKVKSYKRQAEEAEEQSNVNLSKFRKLQHELEEAEERADIAESQVNKLRVKSREVHTKIISEE", - "output": "cytoplasm ; myofibril ; myosin filament ; myosin II complex ; actin filament binding ; ATP binding ; calmodulin binding ; double-stranded RNA binding ; microfilament motor activity ; muscle contraction" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "LSAMLEDTENWLYEELSLTQDPVV", - "output": "cytoplasm ; cytosol ; nucleus ; ATP binding ; protein folding ; response to unfolded protein" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MEPLKTHNGIAAVLNRINVDTDQIIPKQFLKRIERTGYGRFAFFDWRYLDNGDPNPDFELNRPEYKGASILIAGENFGCGSSREHAPWALDDYGFKIIIAPSFADIFHQNCFKNGMLPIRLPYEAWKELAEQYEYQSLTMTVDLEKQTITDHAGRQIAFEVDPHWKEMLLNGYDEISLTLLLEEEIEQFEKQRSSWLQA", - "output": "3-isopropylmalate dehydratase complex ; 3-isopropylmalate dehydratase activity ; leucine biosynthetic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MLVNFVLVGFGAALGAMLRYGISVLVKSKWKTNFPFATFFINITGSFLLGFLVSSALGPVWQLFLGTGFMGGYTTFSTFKVESMELKWKTNYRVLFSYLGCTYVFGLIAAFLGLMLGV", - "output": "plasma membrane ; fluoride transmembrane transporter activity" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MDKRALKERLSRVGRVAVLAGGRSAERAVSLKSGAAVHAGLRNLGLLAELVDPADKSVDTLRGFDAAFIALHGRGGEDGVIQGVLEHLEIPYTGSGVMASAIGMDKVRTKQLWKGAGLPTPAFYVAGREEAELGFPVIVKPAHEGSSIGMAKADNTEELGEALVAAEKFDQDVLVEAWVNGPEYTVAVLGDEALPAIRLQTPHVFYDFEAKYQSDSTEYLCPAGLDDADEQALRTLALTAFRVAGCRGWGRVDVMRDEQGQWQLLEVNTVPGMTDHSLVPMAAKATGRDFDVLVGEILLDALERGRG", - "output": "cytoplasm ; ATP binding ; D-alanine-D-alanine ligase activity ; metal ion binding ; cell wall organization ; peptidoglycan biosynthetic process ; regulation of cell shape" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MKGLIGRKIGMTRIFTDEGISIPITIIQVEPNIITQVKSIQTDGYYAYQVTTGTKKPNLVIKPEAGHFAKAGTKAGRSLWEFRLKHEEKPINIGEILTLEYFTNIKKVDITGTSKGKGFSGTVKRWNFHMQDASHGNSLSHRVTGSIGQNQTPGKVFKGKKMAGHMGNKRVTIQNLDIIRIDLRKNLLLIKGAIPGAPGNDLIIKPAIKLSH", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MTLEEVRGQDTVPESTARMQGAGKALHELLLSAHGQGCLTAGVYESAKVLNVDPDNVTFCVLAADEEDEGDIALQIHFTLIQAFCCENDIDIVRVGDVQRLAAIVGADEEGGAPGDLHCILISNPNEDTWKDPALEKLSLFCEESRSFNDWVPSITLPE", - "output": "cytoplasm ; nucleus ; identical protein binding ; apoptotic process ; negative regulation of protein kinase activity ; positive regulation of apoptotic process ; positive regulation of cold-induced thermogenesis ; positive regulation of JNK cascade ; positive regulation of MAPK cascade ; positive regulation of p38MAPK cascade ; regulation of cell cycle ; T-helper 1 cell differentiation" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MPKHGKRYRALLEKVDPNKVYTIDEAARLVKELATAKFDETVEVHAKLGIDPRRSDQNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQKILDGWMDFDAVVATPDVMGAVGSKLGRILGPRGLLPNPKAGTVGFNIGEIIREIKAGRIEFRNDKTGAIHAPVGKASFPPEKLADNIRAFIRALEAHKPEGAKGTFLRSVYVTTTMGPSVRINPHS", - "output": "large ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; tRNA binding ; regulation of translation ; translation" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MKILSLRLKNFRNYKEAEVSLSPDMNYIFGENAQGKTNLLEALYVLSLGRSFRTTHLTEAIFFGSSHFFLEMTFEKDGFCHTLSTYVDKQGKKILCDHSPIKTLSQLIGMVPIVLFSSKDRSLISGAPADRRLFLNLLLSQCDPQYKHTLSYYHRALLQRNTLLKTKQTSTLSVWDEQLATLGAYLTVSRYFCCEQLNQLVQELWSNSLSEQLRIKFKSSLIKQGNLSQEAIIEELRKQLTTALHRDLELGTTSVGPHREDFTLMINDLSVAQFSSEGQKHSLLAILRLAECLYIKNIYNACPLFCMDDIHAGLDNHRISQLLDLAPTLGQTLMTSTNIPHQSLSETSKIFSVNQAQISIHSHLIVN", - "output": "cytoplasm ; ATP binding ; single-stranded DNA binding ; DNA repair ; DNA replication ; SOS response" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MAKKMKLSEITNMFAGMNVEALEGVTIEGDIEIDLGGLGGFDPMLAAALGQESAVLAQHFARIAGMFGYPVSVGAPAAAPAAVSPALAAPKLKDLIPAKFEFSNIEEWTTQVEEVPIGNTSADGGSRGKRILLGGEKALPFFPDAPMPNRNQVTIDVFDMRLGLAKAVKENYDDVMDNPGEWAKKNVEKFNADMITIHLISTDPLIKDTSPKDAAKTVEEVLQAVDVPIAIGGSGNPQKDPLVLAKAAEVAEGERCLLASASLNLDYAAIAEAALKYDHDVLSWTQLDMNAQKELNRKLMKQCNVPRDRIIMDPTTAALGYGLDYAYTNMERIRLAALMGDDELTFPMSSGTTNAWGARESWMVSSPLKEDSDWGPREYRGPIWEIITGLSLAIAGNDLFMMMHPTSVAVLKHMTQTLFGSIEAEPVDIANWIGAEV", - "output": "carbon-monoxide dehydrogenase (acceptor) activity ; methanogenesis, from acetate ; one-carbon metabolic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MKSLLFTLAVFMLLAQLVSGNWYVKKCLNDVGICKKKCKPGEMHIKNGWATCGKQRDCCVPADRRANYPAFCVQTKTTRTSTVTAKTTLMVTTASMSSMAPTPVSPTG", - "output": "extracellular region ; defense response to bacterium ; innate immune response ; single fertilization" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MSQISMFVRKLHKFSYNPNYKFKCGLEIHTQLKTKYKLFSLSPTSYNEPPNTKLSYFDVGLPGTQPLLNPEALLLALKASVALNCDIQSYSSFDRKHYFYADQPLGYQITQHYYPLAKNGYVQLNKFDDMPDKVISLEQVQLEQDTGKTVNYDDRINVDLNRANTPLIEVVTKPDFENIDQVQAFVRKYQLLVSHLDICTGDLETGAIRVDANISVNNNPRVEIKNLGSSGEIVDALKYEYNRQVTLLQNNGKIIQETRGWNGIATESLRKKENAVDYRYVPDSELPVIRLDKNIQAQLQNTLDELPDSVLDRLTKEPYNLQLAHARNLLFQPEILDYYENIFGRIRDANKWFFHELLAAFAKSDVEFQVDIVLPDMLVDIVSSVEKNEISLTGARIILKHIIRNKSTKTLPQLIKELDIGKPEASAELEEAINEICQQIINTNADVVEKIARGHTNALQVLIGQAMKATKGKVHAKEFRSKFMELLK", - "output": "glutamyl-tRNA(Gln) amidotransferase complex ; mitochondrion ; ATP binding ; glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity ; glutaminyl-tRNAGln biosynthesis via transamidation ; mitochondrial translation" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MRNLGLLEITLLCSLFVYFRIDSVSSLNSDGLALLSLLKHFDKVPLEVASTWKENTSETTPCNNNWFGVICDLSGNVVETLNLSASGLSGQLGSEIGELKSLVTLDLSLNSFSGLLPSTLGNCTSLEYLDLSNNDFSGEVPDIFGSLQNLTFLYLDRNNLSGLIPASVGGLIELVDLRMSYNNLSGTIPELLGNCSKLEYLALNNNKLNGSLPASLYLLENLGELFVSNNSLGGRLHFGSSNCKKLVSLDLSFNDFQGGVPPEIGNCSSLHSLVMVKCNLTGTIPSSMGMLRKVSVIDLSDNRLSGNIPQELGNCSSLETLKLNDNQLQGEIPPALSKLKKLQSLELFFNKLSGEIPIGIWKIQSLTQMLVYNNTLTGELPVEVTQLKHLKKLTLFNNGFYGDIPMSLGLNRSLEEVDLLGNRFTGEIPPHLCHGQKLRLFILGSNQLHGKIPASIRQCKTLERVRLEDNKLSGVLPEFPESLSLSYVNLGSNSFEGSIPRSLGSCKNLLTIDLSQNKLTGLIPPELGNLQSLGLLNLSHNYLEGPLPSQLSGCARLLYFDVGSNSLNGSIPSSFRSWKSLSTLVLSDNNFLGAIPQFLAELDRLSDLRIARNAFGGKIPSSVGLLKSLRYGLDLSANVFTGEIPTTLGALINLERLNISNNKLTGPLSVLQSLKSLNQVDVSYNQFTGPIPVNLLSNSSKFSGNPDLCIQASYSVSAIIRKEFKSCKGQVKLSTWKIALIAAGSSLSVLALLFALFLVLCRCKRGTKTEDANILAEEGLSLLLNKVLAATDNLDDKYIIGRGAHGVVYRASLGSGEEYAVKKLIFAEHIRANQNMKREIETIGLVRHRNLIRLERFWMRKEDGLMLYQYMPNGSLHDVLHRGNQGEAVLDWSARFNIALGISHGLAYLHHDCHPPIIHRDIKPENILMDSDMEPHIGDFGLARILDDSTVSTATVTGTTGYIAPENAYKTVRSKESDVYSYGVVLLELVTGKRALDRSFPEDINIVSWVRSVLSSYEDEDDTAGPIVDPKLVDELLDTKLREQAIQVTDLALRCTDKRPENRPSMRDVVKDLTDLESFVRSTSGSVH", - "output": "plasma membrane ; ATP binding ; peptide binding ; protein serine kinase activity ; protein serine/threonine kinase activity ; defense response to bacterium ; protein phosphorylation ; response to jasmonic acid ; response to wounding" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MLFSFFRNLCRVLYRVRVTGDTQALKGERVLITPNHVSFIDGILLGLFLPVRPVFAVYTSISQQWYMRWLKSFIDFVPLDPTQPMAIKHLVRLVEQGRPVVIFPEGRITTTGSLMKIYDGAGFVAAKSGATVIPVRIEGAELTHFSRLKGLVKRRLFPQITLHILPPTQVAMPDAPRARDRRKIAGEMLHQIMMEARMAVRPRETLYESLLSAMYRFGAGKKCVEDVNFTPDSYRKLLTKTLFVGRILEKYSVEGERIGLMLPNAGISAAVIFGAIARRRIPAMMNYTAGVKGLTSAITAAEIKTIFTSRQFLDKGKLWHLPEQLTQVRWVYLEDLKADVTTADKVWIFAHLLMPRLAQVKQQPEEEALILFTSGSEGHPKGVVHSHKSILANVEQIKTIADFTTNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFLYPSPLHYRIVPELVYDRSCTVLFGTSTFLGHYARFANPYDFYRLRYVVAGAEKLQESTKQLWQDKFGLRILEGYGVTECAPVVSINVPMAAKPGTVGRILPGMDARLLSVPGIEEGGRLQLKGPNIMNGYLRVEKPGVLEVPTAENVRGEMERGWYDTGDIVRFDEQGFVQIQGRAKRFAKIAGEMVSLEMVEQLALGVSPDKVHATAIKSDASKGEALVLFTTDNELTRDKLQQYAREHGVPELAVPRDIRYLKQMPLLGSGKPDFVTLKSWVDEAEQHDE", - "output": "plasma membrane ; acyl--phospholipid O-acyltransferase activity ; ATP binding ; long-chain fatty acid ligase activity ; fatty acid metabolic process ; phospholipid biosynthetic process" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MPHSHPALTPEQKKELSDIAHRIVAPGKGILAADESTGSIAKRLQSIGTENTEENRRFYRQLLLTADDRVNPCIGGVILFHETLYQKADDGRPFPQVIKSKGGVVGIKVDKGVVPLAGTNGETTTQGLDGLSERCAQYKKDGADFAKWRCVLKIGEHTPSALAIMENANVLARYASICQQNGIVPIVEPEILPDGDHDLKRCQYVTEKVLAAVYKALSDHHIYLEGTLLKPNMVTPGHACTQKYSHEEIAMATVTALRRTVPPAVTGVTFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYVKRALANSLACQGKYTPSGQAGAAASESLFISNHAY", - "output": "I band ; M band ; fructose-bisphosphate aldolase activity ; glycolytic process ; negative regulation of Arp2/3 complex-mediated actin nucleation ; positive regulation of cell migration ; protein homotetramerization" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MPLFFSDNLRAALECLLFVAGGPVSVDSLAACLGVKPGDVDELAAELQELYAREERGLQIRAVAGGYQMCTRPEFASYCEALLRPELPALSRAALETLAIIAYRQPVTRTEMEYIRGVKVDGVLNTLISRGLVQEVGRKEAPGRPILYGTTPKFLEFFGLKDLKELPPLEDVAASQENSREAGGRGSIPGHPGEE", - "output": "cytoplasm ; cell division ; chromosome separation ; DNA replication" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MLKREMNIADYDAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGADYANVQPHSGSQANFAVYTALLEPGDTVLGMNLAHGGHLTHGSPVNFSGKLYNIVPYGIDATGHIDYADLEKQAKEHKPKMIIGGFSAYSGVVDWAKMREIADSIGAYLFVDMAHVAGLVAAGVYPNPVPHAHVVTTTTHKTLAGPRGGLILAKGGSEELYKKLNSAVFPGGQGGPLMHVIAGKAVALKEAMEPEFKTYQQQVAKNAKAMVEVFLERGYKVVSGGTDNHLFLVDLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTSGIRVGTPAITRRGFKEAEAKELAGWMCDVLDSINDEAVIERIKGKVLDICARYPVYA", - "output": "cytoplasm ; glycine hydroxymethyltransferase activity ; pyridoxal phosphate binding ; glycine biosynthetic process from serine ; tetrahydrofolate interconversion" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MKSEYDVIVVGAGPGGSLAAKTAAEQGLDVLLIEKRQEIGDPVRCAEGVGKAGLQEFVEPDPKWISADIKCARIFSPDGTMVELSEKMAGNEVGFVLERKIFDRELAKMAAKAGAEVQVKTQATGLIIENGQVCGITGKRHGDEFTARAKVVVAADGVESKVGRWAGINTTLKMKDIETCAQFLMTDINIKPNSCDFYLGSKYAPGGYVWVFPKGDREANVGLGMLASHYKGKHPIEYLREFVADKFPEGKILETVVGAVPVSGMLPKLSTGGLVLVGDAGHVSDPITGGGIINAMSSGRIAGNIIANCIRAGDVSAKALSRYDAEVREALGKSLDKNYKIKEVVTKVSDNTMNVAAHSLQGVDFENVTVTKLVKEIVTRNPALLKELVGLI", - "output": "FAD binding ; geranylgeranyl reductase activity ; oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor ; oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor ; glycerophospholipid metabolic process ; membrane lipid biosynthetic process ; phospholipid biosynthetic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MIRTMLQGKLHRVKVTHADLHYEGSCAIDQDFLDAAGILENEAIDIWNVTNGKRFSTYAIAAERGSRIISVNGAAAHCASVGDIVIIASFVTMPDEEARTWRPNVAYFEGDNEMKRTAKAIPVQVA", - "output": "cytoplasm ; aspartate 1-decarboxylase activity ; alanine biosynthetic process ; pantothenate biosynthetic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MEMSFRWYGEDDPVTLENIGQIPTMKGIVTAIYDVPVGEVWSRERIQQLKEKVEAAGLKISVIESVPVHEDIKLGRPTRDLLIDNYIQTVKNLAAEGIDTICYNFMPVFDWTRTDLAYQYPDGSTALIFDETVSKKMDPVNGELSLPGWDASYSKEEMKAIMDAYAEIDEEKLWENLTYFIKRIIPEAEAVGVKMAIHPDDPPYSIFGLPRIITGLEAIERFVKLYDSKSNGITLCVGSYASDPQNDVLEISRRAFELDRVNFVHARNIKLGDGKSFKESAHPSEYGSIDMYEVIKLCHEFGFEGAIRPDHGRMIWGETGRPGYGLYDRALGATYLSGLYEAVIKGSK", - "output": "mannonate dehydratase activity ; glucuronate catabolic process" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MLNKELLDALNEQMNHEFYAAHAYMAMAAFCDDNSYEGFANFYIQQAKEERFHGKKIYDYINDRGEHALFTAIPAPKTEFSSILETFEDGLAQEQDVTHRFYNLSDLANKDKDYATISFLNWFLDEQVEEEAMFETHIDYLNRIGDDSNTLYLYEKELAARSFDESE", - "output": "cytoplasm ; ferric iron binding ; oxidoreductase activity ; intracellular iron ion homeostasis ; iron ion transport" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MEEIKETVEKKNKEKKYLNDYKIISEGNNIKVLQKKDFKPKFSLVSYKNYEQNFDFENAKIVSTNFAIDRHIKMKNPPDPFVFIKMPSSKLVQSQLKLYYENEGYKDIPVWITPCSAFMRYIKSYPIVGTVTETMEKKKGFTNRFLSTSETKASVSVGFFGCESSMEVTSGYEYEDTVTSEETRSWSQTLNEGSYIVYQNVLVYAYIIYGGSYKPYIDQMNKFNPGLNIKFFREDKCIFFVPINRDDAFTLRYQDNTWDPVEYDVLIDYLGQNQDKWFSGGLP", - "output": "cytosol ; phagocytic vesicle ; DNA damage response ; glucose homeostasis ; positive regulation of aggregate size involved in sorocarp development ; regulation of glucose-6-phosphatase activity ; regulation of protein secretion ; signal transduction" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MSATANLKKDYQERIVPALMKQFGYTSVMQVPVLKKIVINQGLGMATGDKKIIDVAVSELTAITGQKAVPTVSKKDISNFKLRKKMPIGVMVTLRREQMYEFLERLVRIALPRIRDFKGIESKLDGRGNYTLGINEQIIFPEINIDAITKILGMNITFVTSAQSDEEGYALLKEFGLPFKNAKKQN", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; tRNA binding ; translation" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MIQEQTMLNVADNSGARRVMCIKVLGGSHRRYAGVGDIIKITIKEAIPRGKVKKGDVLKAVVVRTKKGVRRPDGSVIRFDGNACVILNNNSEQPIGTRIFGPVTRELRTEKFMKIISLAPEVL", - "output": "large ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MSSPRSNKPKIVNGPGGYILQDVPHLIDYLPDLPTYPNPLQDNPAYSVVKQYFVHADDSVPEKVVVHKDGPRGVHFRRAGPRQKVYFESDEVHACIVTCGGLCPGLNTVIREVVSSLSYMYGVKRILGIDGGYRGFYAKNTIPLNSKVVNDIHKRGGTIIGTSRGGHDTNKIVDSIQDRGINQVYIIGGDGTQRGASVIFEEIRRRRLKVAVVGIPKTIDNDIPVIDKSFGFDTAVEEAQRAINAAHVEAESNENGIGFVKLMGRYSGYIAMYATLASRDVDCCLIPESPFYLEGEGGLFEFIERRLKDHGHMVIVLAEGAGQDLMCKSMESTPMDASGNKLLKDVGLWLSQSIKDHFKKNKMVMNLKYIDPTYMIRAVPSNASDNVYCTLLAQSAVHGAMAGYTGYTSGLVNGRQTYIPFYRITETQNNVVITDRMWARLLSSTNQPSFLGPKDTSEEKKELPETPLLDDGAVDIPPVTKEVTK", - "output": "cytoplasm ; cytosol ; 6-phosphofructokinase activity ; ATP binding ; metal ion binding ; fructose 6-phosphate metabolic process ; glycolytic process" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MKRRNFIQLSSLATIGMSLPSAGIVNACSSFPEQSLEFKNLTSELLKEWCDGMLKVQINNPSNLEEHGALRCPSCSHIHGRCMDAVYPFLYMADVSGDEKYIEAAKLVMIWAENNVSQENGAWTVIPNPKSWKGITIFGAIALAESLHYHSHILDDKTLKAWTNRLARAGQYIYDTFTIDFTNINYGGTAIYGLDIIGDVLGNGNFKEKSKKMAEEVQAFFTKNDYLLYGECKPEADKLSAKGLHGVDLGYNVEETLNSLVMYALKNDDQALLQIVTKSLNSHLEFMLPDGGWDNSWGNRMYKWTYWGSRTCDGSQPAFAMMAHINPAFGTAAVKNTELLKQCTANGLLHGGPHYISAGIPPCVHHTFTHAKPLAALLDHWKHLPEINKTTALPRVTANGIKHFKDLDVLLFSRGDWRGTVSAYDAEYHYKKDYRQATGGSLGILYHNKVGLLCAASMAVYNMVEPYNQQPQPGKDIALTPRIETFKEDQWYTNLYDLTANLEAIDTKEVINLASVVKLKNESRKMVSGTASEFHLTYSCAKEGLTIKVSTQQDILEPTAFVLPIASPEKEKVEFVNEHEIKISKPGGVVTIKANVPLKLKEYSGTRTFNMVPGLEALPIELFFETHIKELVLIVSVV", - "output": "periplasmic space ; chondroitin-sulfate-ABC endolyase activity ; heparin-sulfate lyase activity ; carbohydrate metabolic process" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MDCNCFDPQWPADELLMKYQYISDFFIAVAYFSIPIELVYFVQKSAVFPYRWVLVQFGAFIVLCGATHLINLWTSTAHTRTLAIVMTTAKVLTAVVSCATALMLVHIIPDLLSVKTRELFLKNKAAELDREMGLIRTQEETGRYVRMLTHEIRSTLDRHTILKTTLVELGRTLALEECALWMPTPPGLELQLSYTLRHQNPIGFTVPIQLPVINQVFGTNRAVKISPNSPVARLRPAGKYMPGEVVAVRVPLLHLSNFQINDWPELSTKRYALMVLMLPSGSARQWHVHELELVEVVADQVAVALSHAAILEESMRARDLLMEQNVALDLARREAEMAVRARNDFLAVMNHEMRTPMHAIIALSSLLQETELTPEQRLMVETILKSSNLLATLINDVLDLSRLEDGSLQLDVGTFNLHVLFRKVLNLIKPIASVKNCLSRLTCLQICPEFAIGDEKRLMQILLNVVGNAVKFSKEGSVSISAVAAKSESLSDPRAPEFFPVQSENHFYLRVQVKDTGSGINPQDIPKLFCKFAQNQALATKSSGGTGLGLAISKRFVNLMEGHIWIESEGLGKGSTAIFIVKLGIPGRSNEPKLPFMPRLPANHMQMTFQGLKVLIMDDNGFSRMVTKGLLVHLGCDVTTVSSGDECLRVLTQEHKVVFMDVSIPGIDCYEVAVQIHEKFGKHHNRPLIVALTGNTDRVTKENCMRVGMDGVILKPVSVDKMRSVLSELLEHGVILQS", - "output": "endoplasmic reticulum ; endoplasmic reticulum membrane ; ATP binding ; ethylene binding ; ethylene receptor activity ; metal ion binding ; phosphorelay sensor kinase activity ; anatomical structure development ; negative regulation of ethylene-activated signaling pathway" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MTQNIGKITQVISAVVDVKFTNNSKLPEILNALECYNAKQRIVLEVAQHIGDDTVRCISMGSTEGLIRGLEVIDTGNPIHIPVGIATLGRIMNVVGEPIDGKGEIKSSTISSIYKPAPDFINQSTERDILVTGIKVVDLLAPYTKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYTVFAGVGERTREGNDLYHEMIASGVINLEAPEKSKVALVYGQMNEPPGARARVALSGLTIAESFRDMNAGQDVLFFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGELQERITSTKHGSITSVQAIYVPADDLTDPAPSTSFAHLDATTVLSRQIAELGIYPAVDPLDSNSQVLDPMIVGEEHYSVARQVQQVLQTYKSLQDIIAILGMDELSEEDKLTVSRARKIQRFLSQPFHVAEVFTGVEGKFVNLDDTIAGFKGLVEGKYDDLPEAAFYMVGTIDEAVEKAKILKI", - "output": "plasma membrane ; proton-transporting ATP synthase complex, catalytic core F(1) ; ATP binding ; proton-transporting ATP synthase activity, rotational mechanism ; proton-transporting ATPase activity, rotational mechanism" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MKIVIQRVKEASVSIDGKIAGAIDQGLLLLVGIGPDDQAEDIDYAVRKISHMRIFSDSEGKMNRSIQDIEGSVLSISQFTLYADTKKGNRPAFTGAAKPDKASQLYNSFNDHLEELVPVKRGVFGADMQVSLINDGPVTIILDTKNR", - "output": "cytoplasm ; D-aminoacyl-tRNA deacylase activity ; Gly-tRNA(Ala) hydrolase activity ; Ser(Gly)-tRNA(Ala) hydrolase activity ; tRNA binding ; D-amino acid catabolic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MRSIASKKLVIATHNTGKLHEITTLVAPFGLEIQSAKELDLPEPKETGVTFEENAYIKAFAAAKNTGLPALSDDSGLEVDALGGAPGVYTADWALQSDGTRNFSKAMQKIEDELQKIGAHEKSQRKARFISVICIAWSDAYADYFRGSVEGTFIWPPRGDKGFGFDPIFLPDGYENTFGEMSTEQKHGWKLNDKTPLSHRARAFKLLAENLLTLS", - "output": "dITP diphosphatase activity ; ITP diphosphatase activity ; metal ion binding ; nucleotide binding ; ribonucleoside triphosphate phosphatase activity ; XTP diphosphatase activity ; nucleotide metabolic process ; purine nucleoside triphosphate catabolic process" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MHRYRTHTCGAIRPSDVGQTVRLSGWCHRIRDHGGVLFIDLRDHYGLTQCVIDSDSKAFKAAETARSEWVIRIDGRVRTRPAGTENAELPTGSVEVYIDDLEVLGPAGELPLPVFGDQEYPEETRLKYRFLDLRREKLHANIMKRGAIVDSLRRRMREGGFFEFQTPILTASSPEGARDYLVPSRVHPGKFYALPQAPQQFKQLTMIAGFDRYFQIAPCFRDEDARADRSPGEFYQLDIEMSFVTQEDVFQAVEPVLRGVFEEFAGGKRVTKEFPRITYADAMLKYGVDKPDLRNPLIIADVTDEFADDAVEFKAFKGVIKSGGVVRAIPATGAAGQPRSFFDKLNDWARSEGAPGLGYIVFEEEGGALTGKGPIAKFIPAAIQARIAEKAGAKAGDAVFFAAGTEAKAAGLAGKARIRIGDELKLSDTDQFAFCWVVDFPMYEWNEEDKKIDFSHNPFSMPNFDRDEFLALGEADSEKILGIKAFQYDIVCNGIELSSGAIRNHRPDVMEKAFAIAGYGRDVLEEKFGGMLNALRLGAPPHGGIAPGVDRIVMLLCEEPNIREVVLFPMNQRAEDLMMGAPAEATPKQLRELHIRLNLPEKKA", - "output": "cytoplasm ; aspartate-tRNA ligase activity ; aspartate-tRNA(Asn) ligase activity ; ATP binding ; nucleic acid binding ; aspartyl-tRNA aminoacylation" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MVRCDRGLQMLLTTAGAFAAFSLMAIAIGTDYWLYSSAHICNGTNLTMDDGPPPRRARGDLTHSGLWRVCCIEGIYKGHCFRINHFPEDNDYDHDSSEYLLRIVRASSVFPILSTILLLLGGLCIGAGRIYSRKNNIVLSAGILFVAAGLSNIIGIIVYISSNTGDPSDKRDEDKKNHYNYGWSFYFGALSFIVAETVGVLAVNIYIEKNKELRFKTKREFLKASSSSPYARMPSYRYRRRRSRSSSRSTEASPSRDVSPMGLKITGAIPMGELSMYTLSREPLKVTTAASYSPDQEASFLQVHDFFQQDLKEGFHVSMLNRRTTPV", - "output": "AMPA glutamate receptor complex ; cell body ; cell surface ; endocytic vesicle membrane ; glutamatergic synapse ; L-type voltage-gated calcium channel complex ; plasma membrane ; postsynaptic density membrane ; somatodendritic compartment ; calcium channel regulator activity ; channel regulator activity ; ionotropic glutamate receptor binding ; voltage-gated calcium channel activity ; neurotransmitter receptor internalization ; neurotransmitter receptor transport, postsynaptic endosome to lysosome ; positive regulation of AMPA receptor activity ; positive regulation of synaptic transmission, glutamatergic ; postsynaptic neurotransmitter receptor diffusion trapping ; regulation of AMPA receptor activity ; regulation of postsynaptic neurotransmitter receptor activity ; response to cocaine ; transmission of nerve impulse" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MWSYVWLPLVALSLFKDSIIMAKAATILLPSQTGFDISRSPVCSAPDPNLNYRPVIGILSHPGDGASGRLSNATDASSIAASYVKLAESGGARVIPLIFNEPEEILFQKLELVNGVILTGGWAKEGLYFEIVKKIFNKVLERNDAGEHFPIYAICLGFELLTMIISQNRDIFEKMDARNSASSLQFVENVNIQGTIFQRFPPELLKKLGTDCLVMQNHRFGISPQSFEGNIALSNFFKIVTTCVDDNGKVYVSTVQSTKYPVTGFQWHPEKNAFEWGSSKIPHSEDAIQVTQHAANHLVSEARKSLNRPESKKVLSNLIYNYKPTYCGYAGIGYDEVYIFTQQRSLL", - "output": "extracellular space ; plant-type cell wall ; plant-type vacuole ; vacuole ; gamma-glutamyl-peptidase activity ; omega peptidase activity ; tetrahydrofolylpolyglutamate metabolic process" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEGDGFFYAKLIKK", - "output": "cytoplasm ; RNA binding ; rRNA (cytosine) methyltransferase activity ; regulation of DNA-templated transcription" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MNAGQLPPELQRVHMVGIGGSGMSGIARILLDRGGLVSGSDAKESRVVHALRARGALIRIGHDASLLDLLPGGATAVITIRTAIPKTNPELVEARRRGIPVLLRSAVLARLMDGCTTLMVAGTHGKTTTTSMLVVALQHCGCDPSFVVGGELAVVGTNAHHGLGACFVAEADESDGSLLEYTPNVAVVTNIDSDHLDFYGSVDAYIRVFDSFVERFALGGALVVCNDDPGAAALARRTAELGIRVLRYGSDDRIGETLAARLLSWEQQGTGAVAHIQLAGQPNSRVMRLPVPGRHMALNALGALLAAIEIGASTDEVLDGLAGFRGVRRRFELVGTSGVGQASNSLVRVFDDYAHHPTEISATLAAFRIMLEQSGGGRCIVVFQPHLYSRTKALSREFGRALSAADEVFIVGVNGAREQPLAGVSGASVAKHVSVPVRYIPDYSAVVIEVAAAAGPGDVIVTMGIGDVGLLGPEIVAALRVRANCNTPGCSGVLQ", - "output": "cytoplasm ; ATP binding ; UDP-N-acetylmuramate-L-alanine ligase activity ; cell cycle ; cell division ; cell wall organization ; peptidoglycan biosynthetic process ; regulation of cell shape" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MIKLVLLRHGESQWNRENRFTGWHDIDLTENGRNEAFQAGRLMKEAGLVFDMAYTSVLKRAIRTLWNAMDSMDLMWISVFKSWRLNERHYGALQGLNKSETSRKYGEEQVLVWRRSYDTPPPLLEKSDARYPGTDPRYGDLSEAEIPLSECLKDTVERFLPIWHETIAPQLRKGKRVIIVAHGNSLRALVKYLDNISEEDIVGLNIPTGIPLVYELDDDLKPLKNYYLGDQEALKKAVDAVAGQSKA", - "output": "2,3-bisphosphoglycerate-dependent phosphoglycerate mutase activity ; gluconeogenesis ; glycolytic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MTAPRLTLPSPAKLNLMLHILGRREDGYHELQTLFQFLDYGDEITFAVRDDGVIRLHTEFDGVPHDSNLIVRAAKKLQEQSACSLGIDIWIDKILPMGGGIGGGSSNAATTLLGLNHLWRLGWDEDRLAALGLTLGADVPVFVRGHAAFAEGVGEKLTPVEPAEPWYVVLVPQVSVSTAEIFSDPLLTRNTPPIKVRPVPEGNSRNDCLPVVSRRYPEVRNALNLLGNFTEAKLTGTGSCVFGGFPSKAEADKVSALLTETLTGFVAKGSNVSMLHRKLQSLL", - "output": "4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity ; ATP binding ; isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway ; phosphorylation ; terpenoid biosynthetic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MGFLSKILDGNNKEIKQLGKLADKVIALEEKTAILTDEEIRNKTKQFQTELADIDNVKKQNDYLDKILPEAYALVREGSKRVFNMTPYKVQIMGGIAIHKGDIAEMRTGEGKTLTATMPTYLNALAGRGVHVITVNEYLSSVQSEEMAELYNFLGLTVGLNLNSKTTEEKREAYAQDITYSTNNELGFDYLRDNMVNYSEDRVMRPLHFAIIDEVDSILIDEARTPLIISGEAEKSTSLYTQANVFAKMLKQDEDYKYDEKTKAVHLTEQGADKAERMFKVENLYDVQNVDVISHINTALRAHVTLQRDVDYMVVDGEVLIVDQFTGRTMPGRRFSEGLHQAIEAKEGVQIQNESKTMASITFQNYFRMYNKLAGMTGTAKTEEEEFRNIYNMTVTQIPTNKPVQRNDKSDLIYISQKGKFDAVVEDVVEKHKAGQPVLLGTVAVETSEYISNLLKKRGIRHDVLNAKNHEREAEIVAGAGQKGAVTIATNMAGRGTDIKLGEGVEELGGLAVIGTERHESRRIDDQLRGRSGRQGDKGDSRFYLSLQDELMIRFGSERLQKMMSRLGLDDSTPIESKMVSRAVESAQKRVEGNNFDARKRILEYDEVLRKQREIIYNERNSIIDEEDSSQVVDAMLRSTLQRSINYYINTADDEPEYQPFIDYINDIFLQEGDITEDDIKGKDAEDIFEVVWAKIEAAYQSQKDILEEQMNEFERMILLRSIDSHWTDHIDTMDQLRQGIHLRSYAQQNPLRDYQNEGHELFDIMMQNIEEDTCKFILKSVVQVEDNIEREKTTEFGEAKHVSAEDGKEKVKPKPIVKGDQVGRNDDCPCGSGKKFKNCHGK", - "output": "cytoplasm ; plasma membrane ; ATP binding ; metal ion binding ; protein-exporting ATPase activity ; intracellular protein transmembrane transport ; protein import ; protein targeting" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MPIIKSAIERAKTNVKANERNSAQLSTMRTAVKRFEQAKTAGADNAEELYRKASAAVDKAASKGLIKRNKASRDKSRMAARLAK", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MKDRTQELRTAKDSDDDDDVAVTVDRDRFMDEFFEQVEEIRGFIDKIAENVEEVKRKHSAILASPNPDEKTKEELEELMSDIKKTANKVRSKLKSIEQSIEQEEGLNRSSADLRIRKTQHSTLSRKFVEVMSEYNATQSDYRERCKGRIQRQLEITGRTTTSEELEDMLESGNPAIFASGIIMDSSISKQALSEIETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHAVDYVERAVSDTKKAVKYQSKARRKKIMIIICCVILGIVIASTVGGIFA", - "output": "actomyosin ; axon ; cytosol ; endomembrane system ; extracellular region ; glutamatergic synapse ; neuron projection ; nuclear membrane ; plasma membrane ; postsynaptic density membrane ; presynaptic active zone membrane ; Schaffer collateral - CA1 synapse ; secretory granule ; SNARE complex ; synaptic vesicle ; synaptic vesicle membrane ; synaptobrevin 2-SNAP-25-syntaxin-1a complex ; synaptobrevin 2-SNAP-25-syntaxin-1a-complexin I complex ; synaptobrevin 2-SNAP-25-syntaxin-1a-complexin II complex ; voltage-gated potassium channel complex ; ATP-dependent protein binding ; calcium channel inhibitor activity ; calcium-dependent protein binding ; chloride channel inhibitor activity ; identical protein binding ; kinase binding ; myosin head/neck binding ; protein-containing complex binding ; SNAP receptor activity ; SNARE binding ; transmembrane transporter binding ; calcium-ion regulated exocytosis ; exocytosis ; insulin secretion ; intracellular protein transport ; positive regulation of calcium ion-dependent exocytosis ; positive regulation of catecholamine secretion ; positive regulation of excitatory postsynaptic potential ; positive regulation of neurotransmitter secretion ; positive regulation of norepinephrine secretion ; protein localization to membrane ; protein sumoylation ; regulation of insulin secretion ; regulation of synaptic vesicle priming ; response to gravity ; secretion by cell ; SNARE complex assembly ; synaptic vesicle docking ; synaptic vesicle endocytosis ; synaptic vesicle exocytosis ; synaptic vesicle fusion to presynaptic active zone membrane ; vesicle docking" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MVKVGVIGLQGDVSEHIEAAQRALENLGVSGEVIWLKKPEQLEGISAIIIPGGESTTISRLMQKNGLLEPVRKLGEEGLPIMGTCAGLIMLSKEVIGATPEQRFLELLDVKVNRNAYGRQVDSFEAPVKLAFSDEPFPGVFIRAPRIVELLSDKVKPIAWLGDRVVGVEQDNLIGLEFHPELTEDTRVHEYFLRKAL", - "output": "glutaminase activity ; pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity ; glutamine catabolic process ; pyridoxal phosphate biosynthetic process" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MSSKQFKILVNEDYQVNVPSLPIRDVLQEIKYCYRNGFEGYVFVPEYCRDLVDCDRKDHYVIGVLGNGVSDLKPVLLTEPSVMLQGFIVRANCNGVLEDFDLKIARTGRGAIYVDQYMCGADGKPVIEGDFKDYFGDEDIIEFEGEEYHCAWTTVRDEKPLNQQTLFTIQEIQYNLDIPHKLPNCATRHVAPPVKKNSKIVLSEDYKKLYDIFGSPFMGNGDCLSKCFDTLHFIAATLRCPCGSESSGVGDWTGFKTACCGLSGKVKGVTLGDIKPGDAVVTSMSAGKGVKFFANCVLQYAGDVEGVSIWKVIKTFTVDETVCTPGFEGELNDFIKPESKSLVACSVKRAFITGDIDDAVHDCIITGKLDLSTNLFGNVGLLFKKTPWFVQKCGALFVDAWKVVEELCGSLTLTYKQIYEVVASLCTSAFTIVNYKPTFVVPDNRVKDLVDKCVKVLVKAFDVFTQIITIAGIEAKCFVLGAKYLLFNNALVKLVSVKILGKKQKGLECAFFATSLVGATVNVTPKRTETATISLNKVDDVVAPGEGYIVIVGDMAFYKSGEYYFMMSSPNFVLTNNVFKAVKVPSYDIVYDVDNDTKSKMIAKLGSSFEYDGDIDAAIVKVNELLIEFRQQSLCFRAFKDDKSIFVEAYFKKYKMPACLAKHIGLWNIIKKDSCKRGFLNLFNHLNELEDIKETNIQAIKNILCPDPLLDLDYGAIWYNCMPGCSDPSVLGSVQLLIGNGVKVVCDGCKGFANQLSKGYNKLCNAARNDIEIGGIPFSTFKTPTNTFIEMTDAIYSVIEQGKALSFRDADVPVVDNGTISTADWSEPILLEPAEYVKPKNNGNVIVIAGYTFYKDEDEHFYPYGFGKIVQRMYNKMGGGDKTVSFSEEVDVQEIAPVTRVKLEFEFDNEIVTGVLERAIGTRYKFTGTTWEEFEESISEELDAIFDTLANQGVELEGYFIYDTCGGFDIKNPDGIMISQYDINITADEKSEVSASSEEEEVESVEEDPENEIVEASEGAEGTSSQEEVETVEVADITSTEEDVDIVEVSAKDDPWAAAVDVQEAEQFNPSLPPFKTTNLNGKIILKQGDNNCWINACCYQLQAFDFFNNEAWEKFKKGDVMDFVNLCYAATTLARGHSGDAEYLLELMLNDYSTAKIVLAAKCGCGEKEIVLERAVFKLTPLKESFNYGVCGDCMQVNTCRFLSVEGSGVFVHDILSKQTPEAMFVVKPVMHAVYTGTTQNGHYMVDDIEHGYCVDGMGIKPLKKRCYTSTLFINANVMTRAEKPKQEFKVEKVEQQPIVEENKSSIEKEEIQSPKNDDLILPFYKAGKLSFYQGALDVLINFLEPDVIVNAANGDLKHMGGVARAIDVFTGGKLTERSKDYLKKNKSIAPGNAVFFENVIEHLSVLNAVGPRNGDSRVEAKLCNVYKAIAKCEGKILTPLISVGIFNVRLETSLQCLLKTVNDRGLNVFVYTDQERQTIENFFSCSIPVNVTEDNVNHERVSVSFDKTYGEQLKGTVVIKDKDVTNQLPSAFDVGQKVIKAIDIDWQAHYGFRDAAAFSASSHDAYKFEVVTHSNFIVHKQTDNNCWINAICLALQRLKPQWKFPGVRGLWNEFLERKTQGFVHMLYHISGVKKGEPGDAELMLHKLGDLMDNDCEIIVTHTTACDKCAKVEKFVGPVVAAPLAIHGTDETCVHGVSVNVKVTQIKGTVAITSLIGPIIGEVLEATGYICYSGSNRNGHYTYYDNRNGLVVDAEKAYHFNRDLLQVTTAIASNFVVKKPQAEERPKNCAFNKVAASPKIVQEQKLLAIESGANYALTEFGRYADMFFMAGDKILRLLLEVFKYLLVLFMCLRSTKMPKVKVKPPLAFKDFGAKVRTLNYMRQLNKPSVWRYAKLVLLLIAIYNFFYLFVSIPVVHKLTCNGAVQAYKNSSFIKSAVCGNSILCKACLASYDELADFQHLQVTWDFKSDPLWNRLVQLSYFAFLAVFGNNYVRCFLMYFVSQYLNLWLSYFGYVEYSWFLHVVNFESISAEFVIVVIVVKAVLALKHIVFACSNPSCKTCSRTARQTRIPIQVVVNGSMKTVYVHANGTGKFCKKHNFYCKNCDSYGFENTFICDEIVRDLSNSVKQTVYATDRSHQEVTKVECSDGFYRFYVGDEFTSYDYDVKHKKYSSQEVLKSMLLLDDFIVYSPSGSALANVRNACVYFSQLIGKPIKIVNSDLLEDLSVDFKGALFNAKKNVIKNSFNVDVSECKNLDECYRACNLNVSFSTFEMAVNNAHRFGILITDRSFNNFWPSKVKPGSSGVSAMDIGKCMTSDAKIVNAKVLTQRGKSVVWLSQDFAALSSTAQKVLVKTFVEEGVNFSLTFNAVGSDDDLPYERFTESVSPKSGSGFFDVITQLKQIVILVFVFIFICGLCSVYSVATQSYIESAEGYDYMVIKNGIVQPFDDTISCVHNTYKGFGDWFKAKYGFIPTFGKSCPIVVGTVFDLENMRPIPDVPAYVSIVGRSLVFAINAAFGVTNMCYDHTGNAVSKDSYFDTCVFNTACTTLTGLGGTIVYCAKQGLVEGAKLYSDLMPDYYYEHASGNMVKLPAIIRGLGLRFVKTQATTYCRVGECIDSKAGFCFGGDNWFVYDNEFGNGYICGNSVLGFFKNVFKLFNSNMSVVATSGAMLVNIIIACLAIAMCYGVLKFKKIFGDCTFLIVMIIVTLVVNNVSYFVTQNTFFMIIYAIVYYFITRKLAYPGILDAGFIIAYINMAPWYVITAYILVFLYDSLPSLFKLKVSTNLFEGDKFVGNFESAAMGTFVIDMRSYETIVNSTSIARIKSYANSFNKYKYYTGSMGEADYRMACYAHLGKALMDYSVNRTDMLYTPPTVSVNSTLQSGLRKMAQPSGLVEPCIVRVSYGNNVLNGLWLGDEVICPRHVIASDTTRVINYENEMSSVRLHNFSVSKNNVFLGVVSARYKGVNLVLKVNQVNPNTPEHKFKSIKAGESFNILACYEGCPGSVYGVNMRSQGTIKGSFIAGTCGSVGYVLENGILYFVYMHHLELGNGSHVGSNFEGEMYGGYEDQPSMQLEGTNVMSSDNVVAFLYAALINGERWFVTNTSMSLESYNTWAKTNSFTELSSTDAFSMLAAKTGQSVEKLLDSIVRLNKGFGGRTILSYGSLCDEFTPTEVIRQMYGVNLQAGKVKSFFYPIMTAMTILFAFWLEFFMYTPFTWINPTFVSIVLAVTTLISTVFVSGIKHKMLFFMSFVLPSVILVTAHNLFWDFSYYESLQSIVENTNTMFLPVDMQGVMLTVFCFIVFVTYSVRFFTCKQSWFSLAVTTILVIFNMVKIFGTSDEPWTENQIAFCFVNMLTMIVSLTTKDWMVVIASYRIAYYIVVCVMPSAFVSDFGFMKCISIVYMACGYLFCCYYGILYWVNRFTCMTCGVYQFTVSAAELKYMTANNLSAPKNAYDAMILSAKLIGVGGKRNIKISTVQSKLTEMKCTNVVLLGLLSKMHVESNSKEWNYCVGLHNEINLCDDPEIVLEKLLALIAFFLSKHNTCDLSELIESYFENTTILQSVASAYAALPSWIALEKARADLEEAKKNDVSPQILKQLTKAFNIAKSDFEREASVQKKLDKMAEQAAASMYKEARAVDRKSKIVSAMHSLLFGMLKKLDMSSVNTIIDQARNGVLPLSIIPAASATRLVVITPSLEVFSKIRQENNVHYAGAIWTIVEVKDANGSHVHLKEVTAANELNLTWPLSITCERTTKLQNNEIMPGKLKERAVRASATLDGEAFGSGKALMASESGKSFMYAFIASDNNLKYVKWESNNDIIPIELEAPLRFYVDGANGPEVKYLYFVKNLNTLRRGAVLGYIGATVRLQAGKPTEHPSNSSLLTLCAFSPDPAKAYVDAVKRGMQPVNNCVKMLSNGAGNGMAVTNGVEANTQQDSYGGASVCIYCRCHVEHPAIDGLCRYKGKFVQIPTGTQDPIRFCIENEVCVVCGCWLNNGCMCDRTSMQSFTVDQSYLNECGVLVQLD", - "output": "host cell membrane ; host cell perinuclear region of cytoplasm ; membrane ; cysteine-type deubiquitinase activity ; cysteine-type endopeptidase activity ; omega peptidase activity ; RNA binding ; transferase activity ; zinc ion binding ; induction by virus of host autophagy ; modulation by symbiont of host protein ubiquitination ; proteolysis ; suppression by virus of host viral-induced cytoplasmic pattern recognition receptor signaling pathway via inhibition of IRF3 activity ; viral genome replication ; viral protein processing" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MRKSYRIKKEAEFQQVFETRNSVANRQFVVYSMEKPQQPHFRVGISVGKKIGNAVHRNWVKRRIRQSLLELKPHLKQDVDFLVIARPRADGISMTDAKRSLVHVLKLAKLLDSDYSEE", - "output": "ribonuclease P activity ; tRNA binding ; tRNA 5'-leader removal" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MSNNALQTIINARLPGEEGLWQIHLQDGKISAIDAQSGVMPITENSLDAEQGLVIPPFVEPHIHLDTTQTAGQPNWNQSGTLFEGIERWAERKALLTHDDVKQRAWQTLKWQIANGIQHVRTHVDVSDATLTALKAMLEVKQEVAPWIDLQIVAFPQEGILSYPNGEALLEEALRLGADVVGAIPHFEFTREYGVESLHKTFALAQKYDRLIDVHCDEIDDEQSRFVETVAALAHHEGMGARVTASHTTAMHSYNGAYTSRLFRLLKMSGINFVANPLVNIHLQGRFDTYPKRRGITRVKEMLESGINVCFGHDDVFDPWYPLGTANMLQVLHMGLHVCQLMGYGQINDGLNLITHHSARTLNLQDYGIAAGNSANLIILPAENGFDALRRQVPVRYSVRGGKVIASTQPAQTTVYLEQPEAIDYKR", - "output": "cytosol ; 5-fluorocytosine deaminase activity ; cytosine deaminase activity ; ferrous iron binding ; identical protein binding ; isoguanine deaminase activity ; zinc ion binding ; cytosine catabolic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MPVFTASFQCVTLFGQPASAADAQPLLQGQRPFLHLHARRRRPCGPMLISKSPPYPASEETREWEADGQHEHTDELRETTTTMIDGIRTALRSIGEGEISISAYDTSLVALLKRLDGGDGPQFPSTIDWIVQNQLPDGSWGDASFFMMGDRIMSTLACVVALKSWNIHTDKCERGLLFIQENMWRLAHEEEDWMLVGFEIALPSLLDMAKDLDLDIPYDEPALKAIYAERERKLAKIPRDVLHSMPTTLLHSLEGMVDLDWEKLLKLRCLDGSFHCSPASTATAFQQTGDQKCFEYLDGIVKKFNGGVPCIYPLDVYERLWAVDRLTRLGISRHFTSEIEDCLDYIFRNWTPDGLAHTKNCPVKDIDDTAMGFRLLRLYGYQVDPCVLKKFEKDGKFFCLHGESNPSSVTPMYNTYRASQLKFPGDDGVLGRAEVFCRSFLQDRRGSNRMKDKWAIAKDIPGEVEYAMDYPWKASLPRIETRLYLDQYGGSGDVWIGKVLHRMTLFCNDLYLKAAKADFSNFQKECRVELNGLRRWYLRSNLEKFGGTDPQTTLMTSYFLASANIFEANRAAERLGWARVALLADAVSSHFRRIGGPKNSTSNLEELISLVPFDDAYSGSLREAWKQWLMAWTAKESSQESIEGDTAILLVRAIEIFGGRHVLTGQRPDLWEYSQLEQLTSSICCKLSRRVLAQENGESTEKVEEIDQQVDLEMQELTRRVLQGCSAINRLTRETFLHVVKSFCYVAYCSPETIDSHIDKVIFQDVI", - "output": "chloroplast ; magnesium ion binding ; syn-copalyl diphosphate synthase activity ; terpene synthase activity ; defense response ; gibberellin biosynthetic process" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MDKINQTFVREFILLGLSGYPKLEIIFFALILVMYVVILIGNGVLIIASILDSRLHMPMYFFLGNLSFLDICYTTSSIPSTLVSLISKKRNISFSGCAVQMFFGFAMGSTECFLLGMMAFDRYVAICNPLRYPIIMNKVVYVLLTSVSWLSGGINSTVQTSLAMRWPFCGNNIINHFLCEILAVLKLACSDISVNIVTLAVSNIAFLVLPLLVIFFSYMFILYTILRTNSATGRHKAFSTCSAHLTVVIIFYGTIFFMYAKPKSQDLLGKDNLQATEGLVSMFYGVVTPMLNPIIYSLRNKDVKAAIKYLLSRKAINQ", - "output": "plasma membrane ; G protein-coupled receptor activity ; olfactory receptor activity ; detection of chemical stimulus involved in sensory perception of smell" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MLGLLKKVVGDPSQRQLKKNQKIADQVEALSDEMKSLSDDGLRQKTEEFKKRYKNGESLDDLLPEAYAVVREAATRVLNMTPYPVQILGAIALHQGNIAEMKTGEGKTLVGTMPVYLNALAGKGVHVVTVNDYLARRDSEQMGAMFEFLGLTVGLNVPGLSKEEKKEAYQADITYGTNNEFGFDYLRDNMVLYKEQMVQRSLNFALVDEVDSILIDEARTPLIISGSVERSTKLYSQANSFVRVLKNEEDYTLDEKTKSVQLTEEGVNKAERAFNIDNLFDQRHVQLLHHINQAMKAHVVMHRDADYVVENGEIVIVDQFTGRLMKGRRYSDGLHQAIEAKEGLQIQRESMTLASITFQNYFRMYQKLAGMTGTAKTEEEEFRNIYGMDVMVIPTNKPVIRDDRPDLIFKTMDAKFKAVVNEIEELYKKGQPVLVGTVSVETSELVSTLLKKRRIPHHVLNAKNHEKEAEIIENAGHRGAVTIATNMAGRGTDIKLGEGVRELGGLHVLGTERHESRRIDNQLRGRSGRQGDPGSSQFYLSMEDELMRRFGSDNMRAMMDKLGMEEDQPIESKLVSRAVETAQKRVEGNNFDARKQILQYDDVMREQREIIYKQRMEVLESDNLREIVEKMILSVIERNVQLHTPESEVPEDWDYGAIVNFMKANLLNEDDLTEKDIWGKDPEEIVEIIYDKVIERYNKKEEEFTPEHMREFEKVIMLRTVDRKWMNHIDQMDQLRQGIHLRAYGQNDPLREYRFEGFEMFEAMVASIEEEVAMYVMKAQVQQNLQREKVAEGQAVQPKPTDGDSKAKRQPVRKKETVGRNEPCPCGSGKKYKNCCGQ", - "output": "cytoplasm ; plasma membrane ; ATP binding ; metal ion binding ; protein-exporting ATPase activity ; intracellular protein transmembrane transport ; protein import ; protein targeting" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MGTLHGEKTMFASPNTFYIDESKLCFNKTHFNREDFNVERFMNLARQKSDLKTIQQDLRLYLKSVQNSMIELINDDYADFVHLSSNLVSLQDSLNKIEQDINRIWDEFKESTRESVGMAERIEQKCDELCSNREKQIEIRDRIYFLVAIEKLSEMLLHPPRKCSALWLQKAASFASELKGSTFPHSEEENAAEKIILSQLEAVLCAEGVRSAAGDCQNLPLIYSILSLTESTHSLTALLVSDLLYAEFVNEKHDESNQLKLLKQVFESVKKMRETWAEKMGTEHFRGNIRRFLDETLLTFILTFIDKCMGAVAVPSDTRLFHECFLLTQEFIDNWPSSHTCRAMLKSIRDKFNLLVYFKLETHRFGKQCDQLMSPEMFAEPETSENRENTPQLHCGVSRAIITAIEHVWSDDVYLPPIVDKLWDFTLKLLLKHFSWSQTMKNYFMEEKRDWTSMVTLRSDTGNLHQLVFDFALESIWGKFHDITVDTAPFGQCLTKHGRSIDSLCVQIDDSIIEMFSEVLHQEIAQVSDVPKQYRWTKKSPPTTHSKYVVTAIEMVENLKEKLCCEEHPHTDEIVRKVNLSAFNYFVGKGNEVLDSVEATGSSLSRFKRKTTTDSGSTVTDDDKIKQQIYHDAKYFLSYAENLVFSQADLTGLQEVVNRFDKDARSAIVQEKNQNEEAGNA", - "output": "Golgi membrane ; Golgi transport complex ; Golgi organization ; gonad morphogenesis ; intra-Golgi vesicle-mediated transport ; protein transport ; regulation of cell migration" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MTNYRVESSSGRAARKMRLALMGPAFIAAIGYIDPGNFATNIQAGASFGYQLLWVVVWANLMAMLIQILSAKLGIATGKNLAEQIRDHYPRPVVWFYWVQAEIIAMATDLAEFIGAAIGFKLILGVSLLQGAVLTGIATFLILMLQRRGQKPLEKVIGGLLLFVAAAYIVELIFSQPNLAQLGKGMVIPSLPTSEAVFLAAGVLGATIMPHVIYLHSSLTQHLHGGSRQQRYSATKWDVAIAMTIAGFVNLAMMATAAAAFHFSGHTGVADLDEAYLTLQPLLSHAAATVFGLSLVAAGLSSTVVGTLAGQVVMQGFIRFHIPLWVRRTVTMLPSFIVILMGLDPTRILVMSQVLLSFGIALALVPLLIFTSDSKLMGDLVNSKRVKQTGWVIVVLVVALNIWLLVGTALGL", - "output": "plasma membrane ; metal ion binding ; metal ion transmembrane transporter activity ; symporter activity" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MTGILAVQGAFAEHAAMLDHLGAPWKLLRAAEDFDDSIDRVILPGGESTTQGKLLRSTGLFEPIAEHIAAGKPVFGTCAGMILLARKLDNDDNVYFGALDAVVRRNAYGRQLGSFAATADFGSSSGDSAVVVAPGEHVPQDAPADIVLKDFPLVFIRGPFVAEVGPAATVETSVDGNVVGLRQGKILATAFHPELTDDTRIHELFLSL", - "output": "glutaminase activity ; pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity ; glutamine catabolic process ; pyridoxal phosphate biosynthetic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MQKDYPYALIQFYATAPYTCSYLSDRVARSQVATPGHLIDTPVYSELVRNGFRRSGMFTYRPYCDHCRACVPVRIPVKRFEPDRSQRRAWKMHHELRANEQPLAYSEEHYALYQRYQGSRHAGGGMDQDNREQYAHFLLQSHVDTRLVEFREGDVLRMVSVIDRLSDGLSSVYTFYDPDQTHASYGTYGILWQIEVCRRLKLPYLYLGYWIKESRKMTYKVRFHPLEGRLRGEWRDIDPLRDRASE", - "output": "cytoplasm ; arginyltransferase activity ; leucyltransferase activity ; ubiquitin-dependent protein catabolic process via the N-end rule pathway" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MAGSSTGGGGVGETKVIYHLDEEETPYLVKIPVPAERITLGDFKSVLQRPAGAKYFFKSMDQDFGVVKEEISDDNARLPCFNGRVVSWLVSSDNPQPEMAPPVHEPRAELAPPAPPLPPLPPERTSGIGDSRPPSFHPNVSSSHENLEPETETESVVSLRRERPRRRDSSEHGAGGHRTGGPSRLERHLAGYESSSTLMTSELESTSLGDSDEEDTMSRFSSSTEQSSASRLLKRHRRRRKQRPPRLERTSSFSSVTDSTMSLNIITVTLNMEKYNFLGISIVGQSNERGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDMNFENMSNDDAVRVLRDIVHKPGPIVLTVAKCWDPSPQAYFTLPRNEPIQPIDPAAWVSHSAALTGTFPAYPGSSSMSTITSGSSLPDGCEGRGLSVHTDMASVTKAMAAPESGLEVRDRMWLKITIPNAFLGSDVVDWLYHHVEGFPERREARKYASGLLKAGLIRHTVNKITFSEQCYYVFGDLSGGCESYLVNLSLNDNDGSSGASDQDTLAPLPGATPWPLLPTFSYQYPAPHPYSPQPPPYHELSSYTYGGGSASSQHSEGSRSSGSTRSDGGAGRTGRPEERAPESKSGSGSESEPSSRGGSLRRGGEASGTSDGGPPPSRGSTGGAPNLRAHPGLHPYGPPPGMALPYNPMMVVMMPPPPPPVPPAVQPPGAPPVRDLGSVPPELTASRQSFHMAMGNPSEFFVDVM", - "output": "aggresome ; apical part of cell ; clathrin-coated endocytic vesicle ; cytoplasm ; cytoplasmic vesicle ; cytosol ; lateral plasma membrane ; nuclear body ; nucleoplasm ; nucleus ; frizzled binding ; identical protein binding ; protein domain specific binding ; protein kinase binding ; protein self-association ; protein-macromolecule adaptor activity ; small GTPase binding ; canonical Wnt signaling pathway ; canonical Wnt signaling pathway involved in regulation of cell proliferation ; cochlea morphogenesis ; convergent extension involved in neural plate elongation ; heart development ; heart looping ; intracellular signal transduction ; neural tube closure ; non-canonical Wnt signaling pathway ; outflow tract morphogenesis ; planar cell polarity pathway involved in neural tube closure ; positive regulation of DNA-binding transcription factor activity ; positive regulation of GTPase activity ; positive regulation of JUN kinase activity ; positive regulation of neuron projection arborization ; positive regulation of protein phosphorylation ; positive regulation of protein tyrosine kinase activity ; positive regulation of transcription by RNA polymerase II ; protein localization ; regulation of DNA-templated transcription ; segment specification ; Wnt signaling pathway, planar cell polarity pathway" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MGQKIHPVGFRLGITQEHQSRWFAEPSRYPELLQEDHKLRQYIEQKLGRLAQNNAGISEVRIERKADQIDLEVRTARPGVVVGRGGQGIEALRTGLQTLLGGNRQIRINVVEVQRVDADAYLIAEFIAQQLERRVSFRRVVRQAIQRAQKAGIQGIKVQVSGRLNGAEIARTEWTREGRVPLHTLRADIDYSYCTAKTVYGILGIKVWVFKGEIIPGQEVATPPPSPRDRDRDRGDRDREPRRRQQQRRRQQFEDRSNEG", - "output": "ribonucleoprotein complex ; ribosome ; mRNA binding ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MNVSAYLPTCLPTYLPTCLPTYLPTYLPTYLPICLSEENNGIGIIGIGFRLPGGGSGKSLGNPSELWKELVNGYDGIIETNERWSDNFNKLGEINNRYGGLLPMDEVKSFDPLFFGISPPEATAIDPQQRLLLKCTWEAIEDAMIDPINLRGSNTSVFIGNTTHEYRDLNRTIDSIQTNIFSSSSHSSSNRVSNIFDFHGPSITIDTACSSSSNAVVLGCKSIIEGNSKMSIVGGTSLIFDANTPKSFSYMNMLSKDGRCKSFDANADGYVKSECIGVLLLKDLNQAIIDGDRVYCVIKGTSSNVDGNGYSDKSNFYSPSAQSQAENIKMALSSGNINAKDVDYVEAHGTGTPVGDPIEVEGISSIFKDNHSKENPLLIGSFKSMIGHCEASSGIASLVKCCLMFKNRYFIPNLHFKTPNPLIKFNEWNLKVVVEPTPFPKKEITMAVNNFGVTGSNVCIILKDFNYNHNSSSDNNNTINLKQQQHQNNIEYLIPFSANSTKSLEQYQSLISNFNQETMEFNDFVKEQIMSKSNSLYQRSVILGSNWNDFKDNLISTNNNIKTIKTTSSNISIKSKNPIIIMVFCGQGSQYNTMALELYKNEPIFRKTMDMLDNKLSKYYGFSILEKLRSIPVDDMKSIHNPALAQPAICMVQISLFELYKHWGIKPTFIVGHSLGEVTAAYCSGMIDLETECYLIYHRSIAQSTTTGCGRMLSINISPEKFIEQFSSRYPDVEISCYNSPTSIVIGGKEDQLNKISEELKSKGEFTSMLGSLSSFHTSSQKAIKEYILSLDYKSKESEIPIFSTVTTNLFDYKTTPYSPKYTYENILKSVNFTQTIENLYKHIENNQLGTDIVFIELAPHPTLQFYLKQMIPKDSSYFGKGDSISIYSPLHKKKNDVKEIRQTISQLYCQNGYNINFKCQFENINRSIVPTHKLPLYQWDEKQFWKINSLYENYYLTGPPIDILGNSITDSPFVKSYQTFINIKRKPFQYLKGHVVKGKFYFPGCGYIDNLLKIYPSQDITISTLEFSTPFIFTDDSVNHCLQTNIYPTGKTEYKVLFHFKDQKKNEWIQSSFGNFQLFKHNGEKSLKIFNQKYNIKDLIEKRCNLTKLTKEDLYDHIKLKTGLTYSGMFQAVSMCYLGDNCSLSVVSLELPKHLPDQKSFFNSSILDCCLHGMIGLVDEHCQLVFDRIEGFNLYSSNIPSARDQHTNVYVYSSLNAKMGDSYFASIVVMLEDGTVLIEIDNAACTSLTPIQDSLKIEAPTNELYSTYLQSKDSLILPPQTFESLYQQEKGQNDILVGTIIKQSLVPFVNEKMVFRILDFSSGFADYNGTTFHSSNNVLEKFNQLLKEFPLCEIDIEYTFGSVPQSLTSSIKDKLSHINERVSILYRDYSINDPLLLEDNQLKPSQYDIVLINDLEKETNDIKATLYMIYNLMVPNGQLILINNDGNNLIEIKELLDQCNFKDTIISNDKKSIIQTRKPQLLSELSPNPNIDSYDQIIIYSNDDSEICNKFLKSLESTDDKILSIISTISKFNEFVEKQSITDKSVIYFIKTMEQLTLDNFKSITFEYIEINRKLLKLNSMCKHVLITSDSRKDNYLASSVIGAARYFDEFQQLQLFTLDFDKESIIEYTHNNNEKNLVSLIELLTDKKISIQKEYLIRNGKVYFERIKKEQNLRKKFKSESYQDLVENDLVAVLSPNLEYELKPMTKDLEPFEVQVEIKSFALNYKDYLTYIGSVPPEMVNHKTGDINDPEFGSDFSGVITRVSKNNCSEFKVGDQVYGTAYNTASSKSIIDSGSIYFKPNNLSHEQASTIPVVYSTSLHSIYNIGNLKNYESILIHSASGGVGLSSLNILKWKGHCSYIFLTVGSPEKEKYLRDTYGSLITGIYSTRDKSYVQKIKDKLKELGSDKTGVDLILNTLSSDYMDSNFNCLSKSGRIVDLSITHLNSNEYIDNKKFKFNYGYHNVELLFIAAPILKKLLKSISKAIENNELINNLPITQYSNVNIKNAFEYINQRKHIGKIVVNHDTDLVGNLIKEKINSTSNLDFTLLKSNYQININNLGKNIIVTGQSGIVFEIIKWIVKFAPLVENIIILSKSSMKWQLELLVNRNKHIKFHFKSVDVGDINSMGKAIDEVSNDIDNIDSIFHYAFHQITKNVEAINMDTLDISFGAKTIGAIILHDQSIKRGWKLKNFIIASSVTSSLGSESQCSYVCANNVLESFSQYRKSLGLPSICTSYGLIKSTGFVSRNENVSVMFENLGFNPLSINTILGSLDLQIQNQELSTNLIVSSFNFSNITKYNPQKNNFSKIDYQVSLEEKNKVNQLGHDGNQDNKNSVNQMFLEKVSEVLSIEISKINIDIKLSAYGADSLSIVQLKNWVDKELSGNIITIQQLQTNTISSSIKIITNSLDKKKEGKNKSSTVVNNTNEITTTTKTFEYWKNEAKLDETIIASSIKSDLIIDNKMDKVILLSGSTGFLGGYLLLNLVKMKNCSKIYCLTRSGHLSDQIDLMNKIIDNLKHHKLFEMFEQSELEKIFPVRGDLRKSKLGLSDKMYLEISNQVNLILSCGADINLNANYDEIKPTNVDSTKEFIKLSVSKGTNKPMIPIVNLSSFSIFFGQKLNDEIEFDEYQVGIPSLSNLNNLPGGYIQSKLICEHLLLEASSRGIPAMTIRLPSIFSNPHTGIGHSGDLLQLIIKSISVTKYFPIEPTSLFISPVTWVAQNIINLIFNEGCWSKTKINTLNIISLNGELQTTNEIFLMIKKNFNYKETTLINWKKMISESNDKTCIRLRTFHPLDFTPTKYHMSKEFKISKNTKSLLISFGSYDGWNITEQMVLNLLKQ", - "output": "membrane ; 3-oxoacyl- synthase activity ; oxidoreductase activity ; fatty acid biosynthetic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MEVKGKETASVLCLSKYVDLSSEESHRYYLARRNGLQMLRDRGYEVSDEDINLSLHDFRTVYGERPDVDRLRISALHRSDSTKKVKIVFFGTSMVKVNAIRSVVADILSQETITGLILVLQNHVTNQALKAIELFSFKVEIFQITDLLVNITKHSLKPQHQVLNDEEKTTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELTESHVAFRCVW", - "output": "RNA polymerase V complex ; DNA binding ; DNA-directed 5'-3' RNA polymerase activity ; transcription by RNA polymerase I ; transcription by RNA polymerase II ; transcription by RNA polymerase III" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MKSAEWFEASTEEERVEIQRKVARKVRLEPLDDVDAVAGVDVSYRGEEYRAAAVVLDPETYEVLDRRVVHGTTDVPYEPGFLAFREGPPALEALEGLDFDLLFVHGHGVAHPRRAGLASHLGVALDVPTIGVARRPLVGRSKEEPSRIGDTTPLVHRGEVVGYLVRTDAEARPVVVSPGHRCNLEDAVRWTLRLVRVGKWPEPLRLADLLSRRGASRVEGESRGAGVRR", - "output": "cytoplasm ; deoxyribonuclease V activity ; DNA repair" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MNSFGKRLIMTTFGESHGKAIGCVLDGVPAGLDIDETFIQNELDRRRPGKSKFATARKELDEVQILSGVFEGRSTGTPIAMVIFNKDQKSRDYSNIKDIFRPGHADFTYWHKYGIRDYRGGGRSSARETAARVAAGAVAKLLLKEFGIEVEAGVCEVAGIEAKEFDFDYAKTSEIFALDPYVETLQKEAILKAKEAHDSVGGAVLVRATNLPVGLGEPIYYKLDAVLAEALMSINAAKAVDIGLGREASRLYGSQNNDQITKEGFISNNAGGILGGISNGEDVIAKVWFKPTPSIFQKQRSIDVNGNEVEVELKGRHDPFVAARGSVVAEAMMALVIADMLLLNATSQLSHLKKVYL", - "output": "chorismate synthase activity ; amino acid biosynthetic process ; aromatic amino acid family biosynthetic process ; chorismate biosynthetic process" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MAPFLRISFNSYELGSLQVEDEASQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKTTFDAHIYEGRVIQIVLMRAAEDPVSEVTVGVSVLAERCKKNNGKAEFWLDLQPQAKVLMCVQYFLEDGDCKQSMRSEEEAKFPTMNRRGAIKQAKIHYIKNHEFIATFFGQPTFCSVCKEFVWGLNKQGYKCRQCNAAIHKKCIDKIIGRCTGTATNSRDTIFQKERFNIDMPHRFKVYNYMSPTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCREKVANLCGINQKLLAEALNQVTQRSSRKLDTTESVGIYQGFEKKPEVSGSDILDNNGTYGKIWEGSTRCTLENFTFQKVLGKGSFGKVLLAELKGKDKYFAIKCLKKDVVLIDDDVECTMVEKRVLALAWESPFLTHLICTFQTKDHLFFVMEFLNGGDLMFHIQDKGRFELYRATFYAAEIICGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENIFGEGRASTFCGTPDYIAPEILQGLKYSFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTPHYPRWITKESKDIMEKLFERDPDKRLGVTGNIRIHPFFKTINWSLLEKRKVEPPFKPKVKSPSDYSNFDPEFLNEKPQLSFSDKNLIDSMDQEAFHGFSFVNPKFEQFLDI", - "output": "cell-cell junction ; cytoplasm ; cytosol ; endolysosome ; endoplasmic reticulum ; membrane ; mitochondrion ; nuclear matrix ; nucleus ; perinuclear region of cytoplasm ; plasma membrane ; postsynaptic cytosol ; ATP binding ; calcium-dependent protein kinase C activity ; calcium-independent protein kinase C activity ; enzyme activator activity ; enzyme binding ; insulin receptor substrate binding ; metal ion binding ; non-membrane spanning protein tyrosine kinase activity ; protein kinase activity ; protein kinase binding ; protein kinase C activity ; protein serine kinase activity ; protein serine/threonine kinase activity ; TIR domain binding ; activation of protein kinase activity ; apoptotic process ; B cell proliferation ; cell chemotaxis ; cell cycle ; cellular response to angiotensin ; cellular response to hydrogen peroxide ; cellular response to hydroperoxide ; cellular response to oxidative stress ; cellular response to UV ; cellular senescence ; collagen metabolic process ; D-aspartate import across plasma membrane ; defense response to bacterium ; DNA damage response ; immunoglobulin mediated immune response ; intracellular signal transduction ; negative regulation of actin filament polymerization ; negative regulation of filopodium assembly ; negative regulation of glial cell apoptotic process ; negative regulation of insulin receptor signaling pathway ; negative regulation of MAP kinase activity ; negative regulation of peptidyl-tyrosine phosphorylation ; negative regulation of platelet aggregation ; neutrophil activation ; peptidyl-serine phosphorylation ; peptidyl-threonine phosphorylation ; positive regulation of apoptotic process ; positive regulation of apoptotic signaling pathway ; positive regulation of ceramide biosynthetic process ; positive regulation of endodeoxyribonuclease activity ; positive regulation of glucose import ; positive regulation of glucosylceramide catabolic process ; positive regulation of MAP kinase activity ; positive regulation of MAPK cascade ; positive regulation of phospholipid scramblase activity ; positive regulation of protein dephosphorylation ; positive regulation of protein import into nucleus ; positive regulation of sphingomyelin catabolic process ; positive regulation of superoxide anion generation ; post-translational protein modification ; protein autophosphorylation ; protein phosphorylation ; regulation of actin cytoskeleton organization ; regulation of ceramide biosynthetic process ; regulation of phosphorylation ; response to oxidative stress ; termination of signal transduction" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MKFKTFSKSAVLLTASLAVLAACGSKNTASSPDYKLEGVTFPLQEKKTLKFMTASSPLSPKDPNEKLILQRLEKETGVHIDWTNYQSDFAEKRNLDISSGDLPDAIHNDGASDVDLMNWAKKGVIIPVEDLIDKYMPNLKKILDEKPEYKALMTAPDGHIYSFPWIEELGDGKESIHSVNDMAWINKDWLKKLGLEMPKTTDDLIKVLEAFKNGDPNGNGEADEIPFSFISGNGNEDFKFLFAAFGIGDNDDHLVVGNDGKVDFTADNDNYKEGVKFIRQLQEKGLIDKEAFEHDWNSYIAKGHDQKFGVYFTWDKNNVTGSNESYDVLPVLAGPSGQKHVARTNGMGFARDKMVITSVNKNLELTAKWIDAQYAPLQSVQNNWGTYGDDKQQNIFELDQASNSLKHLPLNGTAPAELRQKTEVGGPLAILDSYYGKVTTMPDDAKWRLDLIKEYYVPYMSNVNNYPRVFMTQEDLDKIAHIEADMNDYIYRKRAEWIVNGNIDTEWDDYKKELEKYGLSDYLAIKQKYYDQYQANKN", - "output": "plasma membrane ; metal ion binding ; polysaccharide transport" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MKSIILFVLSLLLILEKQAAVMGQKGGSKGQLPSGSSQFPHGQKGQHYFGQKDQQHTKSKGSFSIQHTYHVDINDHDRTRKSQQYDLNALHKATKSKQHLGGSQQLLNYKQEGRDHDKSKGHFHMIVIHHKGGQAHRGTQNPSQDQGNSPSGKGLSSQYSNTEKRLWVHGLSKEQASASGAQKGRTQGGSQSSYVLQTEELVVNKQQRETKNSHQNKGHYQNAVDVREEHSSKLQTSLHPAHQDRLQHGSKDIFTTQDELLVYNKNQHQTKNLNQDQEHGQKAHKISYQSSRTEERQLNHGEKSVQKDVSKGSISIQTEKKIHGKSQNQVTIHSQDQEHGHKENKMSHQSSSTEERHLNCGEKGIQKGVSKGSISIQTEEQIHGKSQNQVRIPSQAQEYGHKENKISYRSSSTEERRLNSGEKDVQKGVSKGSISIQTEEKIHGKSQNQVTIPSQDQEHGHKENKMSYQSSSTE", - "output": "extracellular region ; coagulation ; negative regulation of flagellated sperm motility ; sperm capacitation" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MARRLSLLAVVLAMVAAVSASTAAAQSCGCASDQCCSKWGFCGTGSDYCGTGCQAGPCDVPATNDVSVASIVTPEFFAALVAQADDGCAAKGFYTRDAFLTAAGGYPSFGRTGSVDDSKREIAAFFAHANHETIKFCYIEEIDGPSKNYCDETSTQWPCMAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSPVLAFQTALWYWTNNVHDAFVSGQGFGATIRAINGALECDGKNPTAVSNRVAYYQQFCQQFGVDPGSNLTC", - "output": "chitin binding ; chitinase activity ; cell wall macromolecule catabolic process ; chitin catabolic process ; defense response ; polysaccharide catabolic process" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MMAKKPPKPAPRRIFQERLKITALPLYFEGFLLVKRSDHQEYKHYWTELRGTTLFFYTDKKSTIYVGKLDIIDLVCLTGQHSTEKNCAKFTLVLPKEEVHVKTENTESGEEWRGFILTVTELTVPQHVSLLPGQVIRLHEVLEREKKRRIETDQLPLMPPEKEKEPVQDYADVLNPLPECFYAVSRKEATAMLEKNPSWGNMILRPGSDSKNYSITIRQEIEMPRIKHFKVTRTGNNYTIELEKPVTLPNLFSVIDYFVKETRGNLRPFIHSADDNFGQDPNIEDRSEKFKKNPHNA", - "output": "centriolar satellite ; cytoplasm ; cytosol ; intracellular membrane-bounded organelle ; mitochondrion ; nucleoplasm ; nucleus ; protein-containing complex ; macrophage colony-stimulating factor receptor binding ; phosphotyrosine residue binding ; protein kinase binding ; protein tyrosine kinase activator activity ; protein-macromolecule adaptor activity ; receptor tyrosine kinase binding ; signaling adaptor activity ; transmembrane receptor protein tyrosine kinase adaptor activity ; cellular response to lipopolysaccharide ; myeloid cell differentiation ; negative regulation of macrophage chemotaxis ; negative regulation of macrophage colony-stimulating factor signaling pathway ; negative regulation of microglial cell migration ; negative regulation of phosphorylation ; negative regulation of ruffle assembly ; positive regulation of actin cytoskeleton reorganization ; positive regulation of B cell receptor signaling pathway ; positive regulation of gene expression ; positive regulation of microglial cell activation ; positive regulation of microglial cell mediated cytotoxicity ; positive regulation of phagocytosis, engulfment ; response to bacterium ; transmembrane receptor protein tyrosine kinase signaling pathway" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MSILVKNNIHWVGQRDWEVRDFHGTEYKTLRGSSYNSYLIREEKNVLIDTVDHKFSREFVQNLRSEIDLADIDYIIINHAEEDHAGALTELMAQIPDTPIYCTANAIDSINGHHHHPEWNFKVVKTGDTLDIGDGKQLIFVETPMLHWPDSMMTYMTGDAVLFSNDAFGQHYCDEHLFNDEVDQTELFEQCQRYYANILTPFSRLVTPKITEILGFNLPVDMIATSHGVVWRDNPTQIVELYLKWAADYQEDRITIFYDTMSNNTRMMADAIAQGINEVDPNVAVKIFNVARSDKNEILTNVFRSKGVLVGTSTMNNVMMPKIAGLVEEMTGLRFRNKRASAFGSHGWSGGAVDRLSTRLQDAGFEMSLSLKAKWRPDLDALELCRQHGRDIARQWALAPLPETTQKTAPVEETTTCTAADLGPKMQCSVCQWIYDPALGEPLQDVAPGTPWSDVPDNFLCPECSLGKDVFDVLATEAK", - "output": "cytoplasm ; electron transfer activity ; FMN binding ; iron ion binding ; nitric oxide reductase activity" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MAEIMADSELAPKFAPFIGMAGIAAAMIFGSAGAAYGTAKSGIGIAGVGTFRPDLIMKCLIPVVMSGIIAVYALVVAVLIAQDLGPPGSGQHYSLFNGFMHLACGLSVGLTGLAAGYCIGIVGDKGVRSFMLQSRIFVGMVLILIFGEVLGLYGLIVALILNTKSKG", - "output": "fungal-type vacuole ; vacuolar proton-transporting V-type ATPase, V0 domain ; proton-transporting ATPase activity, rotational mechanism" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MKKYLLPVLVLCLGYYYSTNEEFRPEMLQGKKVIVTGASKGIGREMAYHLSKMGAHVVLTARSEEGLQKVVSRCLELGAASAHYIAGTMEDMAFAERFVVEAGKLLGGLDMLILNHITQTTMSLFHDDIHSVRRSMEVNFLSYVVLSTAALPMLKQSNGSIAIISSMAGKMTQPLIASYSASKFALDGFFSTIRKEHLMTKVNVSITLCVLGFIDTETALKETSGIILSQAAPKEECALEIIKGTVLRKDEVYYDKSSWTPLLLGNPGRRIMEFLSLRSYNRDLFVSN", - "output": "apical part of cell ; cytoplasm ; endoplasmic reticulum membrane ; intracellular membrane-bounded organelle ; nuclear membrane ; rough endoplasmic reticulum ; 11-beta-hydroxysteroid dehydrogenase (NADP+) activity ; 7-beta-hydroxysteroid dehydrogenase (NADP+) activity ; cortisol dehydrogenase activity ; NADP binding ; protein homodimerization activity ; steroid binding ; cellular response to estradiol stimulus ; glucocorticoid biosynthetic process ; glucocorticoid catabolic process ; lung development ; mineralocorticoid metabolic process ; regulation of pentose-phosphate shunt ; response to nutrient levels ; steroid catabolic process" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MKTFVAETVKRDWYVVDAAGKTLGRLATELASRLRGKHKAEYTPHVDTGDYIIVINAEKVVVTGKKETDKIYYWHTGYVGGIKDATFKEMISRRPEAVIEIAVKGMLPKGPLGRDMFRKLKVYAGNTHNHAAQQPQVLDI", - "output": "ribonucleoprotein complex ; ribosome ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MVSTTLATITIMSTLVGYTTGPLTDYMWLLIVGFIIAFVLAFSVGANDVANSFGTAVGSGVVTLRQACILASIFETLGSVLLGAKVSETIRKGIIDVTMYKDIEHVLMAGSVSAMFGSAVWQLAASFLKLPISGTHCIVGATIGFSLVAKGQQGVKWLELLRIVASWFLSPLLSGVMSAVLFYFVRMFILQKKDPVPNGLRALPFFYAVTMGINLFSIMFTGAPMLGFDKLPWWGVLLISIGFGIITALIVWFAVCPRLKKKIECEVKSSSPSESPLMEKRELHEAHSPILKPVPEESSVLSSSTPTTPPLPPPEERRVTFDIGDSDDADQKDCKESDLGGAPKTAHVHFTNGPAHIPSNGYSQYHTVHKDSGLYKDLLHKLHLAKVGDCMGEGGDRPIRRNNSYTSYTMAIIGMHGDFKPKESEFRASEDGDKEKAGAQERKRIRMDSYTSYCNAVAENGTPEDLGEGEVTLEMVDEDAGSSRSSLEEDRTDADKPEVSMLFQFLQILTACFGSFAHGGNDVSNAIGPLVALWLVYESGSVISSAPTPIWLLLYGGVGICVGLWVWGRRVIQTMGRDLTPITPSSGFSIELASAVTVVVASNIGLPVSTTHCKVGSVVAVGWLRSRKAVDWRLFRNIFMAWFVTVPISGLISAAIMALFNYVIL", - "output": "membrane ; inorganic phosphate transmembrane transporter activity ; symporter activity ; phosphate ion transmembrane transport" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MAKGQSLQDPFLNALRRERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAISTVVPSRPVSHHSNNAGGGTSSNYHHGSSAQNTSAQQDSEETE", - "output": "RNA binding ; regulation of DNA-templated transcription" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MQGRLSSWLVKHGLIHRSLGFDYQGIETLQIKPEDWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRLEYGIDQPEEVCIKIFVARKNPRIPSIFWVWKSADFQEKESYDMLGISYDNHPRLRRILMPESWIGWPLRKDYIAPNFYEIQDAH", - "output": "chloroplast thylakoid membrane ; NADH dehydrogenase (ubiquinone) activity ; quinone binding ; photosynthesis, light reaction" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MQFAPLLLGVFLLCGSARGSDSSASNAITCFTRGLDLRKETEDVLCPANCPLWQFYVFGDGIYASLSSVCGAAIHRGVITNAGGAVRVQTLPGQENYPAVHANGIQSQVLSRWASSFSVTPGTNNLALEAVGRSVATARPATGKRPKKTLEKKAGNKDCKADIAFLIDGSYNIGQRRFNLQKNFVGKVAVMLGIGTEGPHVGVVQASEHPKIEFYLKNFTAAKEVLFAIKELGFRGGNSNTGKALKHAAQKFFSMENGARKGIPKIIVVFLDGWPSDDLEEAGIVAREFGVNVFIVSVAKPTTEELGMVQDIGFIDKAVCRNNGFFSYQMPSWFGTTKYVKPLVQKLCSHEQMLCSKTCYNSVNIGFLIDGSSSVGESNFRLMLEFISNVAKAFEISDIGSKIATVQFTYDQRTEFSFTDYTTKEKVLSAIRNIRYMSGGTATGDAISFTTRNVFGPVKDGANKNFLVILTDGQSYDDVRGPAVAAQKAGITVFSVGVAWAPLDDLKDMASEPRESHTFFTREFTGLEQMVPDVIRGICKDFLDSKQ", - "output": "collagen-containing extracellular matrix ; extracellular region ; collagen binding" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MTENNDIKMVIITGMSGAGKTVALQSFEDLGYFCVDNLPPMLLPKFVELMADSKSKMNKVALGIDLRGREFFEHLWGALDDLSERTWIIPHILFLDAKDSTLVTRYKETRRSHPLAPTGLPLKGIEAERGLLTDMKARANIVLDTSDLKPKELREKIVQLFSTETEQAFRVNVMSFGFKYGIPIDADLVFDVRFLPNPYYIPHMKPLTGLDEEVSSYVLKFNETHKFLEKLTDLITFMLPHYKREGKSQLVIAIGCTGGQHRSVTLAEYLGKHLKPDYSVHVSHRDVEKRKGH", - "output": "ATP binding ; GTP binding" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MASAVRGSRPWPRLGLQLQFAALLLGTLSPQVHTLRPENLLLVSTLDGSLHALSKQTGDLKWTLRDDPVIEGPMYVTEMAFLSDPADGSLYILGTQKQQGLMKLPFTIPELVHASPCRSSDGVFYTGRKQDAWFVVDPESGETQMTLTTEGPSTPRLYIGRTQYTVTMHDPRAPALRWNTTYRRYSAPPMDGSPGKYMSHLASCGMGLLLTVDPGSGTVLWTQDLGVPVMGVYTWHQDGLRQLPHLTLARDTLHFLALRWGHIRLPASGPRDTATLFSTLDTQLLMTLYVGKDETGFYVSKALVHTGVALVPRGLTLAPADGPTTDEVTLQVSGEREGSPSTAVRYPSGSVALPSQWLLIGHHELPPVLHTTMLRVHPTLGSGTAETRPPENTQAPAFFLELLSLSREKLWDSELHPEEKTPDSYLGLGPQDLLAASLTAVLLGGWILFVMRQQQPQVVEKQQETPLAPADFAHISQDAQSLHSGASRRSQKRLQSPSKQAQPLDDPEAEQLTVVGKISFNPKDVLGRGAGGTFVFRGQFEGRAVAVKRLLRECFGLVRREVQLLQESDRHPNVLRYFCTERGPQFHYIALELCRASLQEYVENPDLDRGGLEPEVVLQQLMSGLAHLHSLHIVHRDLKPGNILITGPDSQGLGRVVLSDFGLCKKLPAGRCSFSLHSGIPGTEGWMAPELLQLLPPDSPTSAVDIFSAGCVFYYVLSGGSHPFGDSLYRQANILTGAPCLAHLEEEVHDKVVARDLVGAMLSPLPQPRPSAPQVLAHPFFWSRAKQLQFFQDVSDWLEKESEQEPLVRALEAGGCAVVRDNWHEHISMPLQTDLRKFRSYKGTSVRDLLRAVRNKKHHYRELPVEVRQALGQVPDGFVQYFTNRFPRLLLHTHRAMRSCASESLFLPYYPPDSEARRPCPGATGR", - "output": "cytosol ; endoplasmic reticulum ; endoplasmic reticulum quality control compartment ; IRE1-TRAF2-ASK1 complex ; ATP binding ; endonuclease activity ; magnesium ion binding ; protein serine kinase activity ; protein serine/threonine kinase activity ; RNA endonuclease activity ; unfolded protein binding ; apoptotic chromosome condensation ; intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress ; IRE1-mediated unfolded protein response ; mRNA processing ; negative regulation of DNA-templated transcription ; positive regulation of JUN kinase activity ; protein phosphorylation ; response to endoplasmic reticulum stress ; rRNA catabolic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MVIDRAGYRLNVGIILVNDSDRVFWGRRSGHDAWQFPQGGLAPGETAMQAMYRELHEEVGLDKGDVEILGSTRRWLKYRLPKQYLRHGSEPLVIGQKQKWYLLKLVTSEQKVRLDLSDSPEFDSWRWVDFHEPEQQVIFFKRQVYIQALKELEPLLKKERRTPYGLKRKRGNQRA", - "output": "pyrophosphatase activity" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MVAITSLAQSLEHLKRKDYSCLELVETLIARCEAAKSLNALLATDWDGLRRSAKKIDRHGNAGVGLCGIPLCFKANIATGVFPTSAATPALINHLPKIPSRVAERLFSAGALPGASGNMHELSFGITSNNYATGAVRNPWNPDLIPGGSSGGVAAAVASRLMLGGIGTDTGASVRLPAALCGVVGFRPTLGRYPGDRIIPVSPTRDTPGIIAQCVADVVILDRIISGTPERIPPVPLKGLRIGLPTTYFYDDLDADVALAAETTIRLLANKGVTFVEANIPHLDELNKGASFPVALYEFPHALKQYLDDFVKTVSFSDVIKGIRSPDVANIANAQIDGHQISKAEYELARHSFRPRLQATYRNYFKLNRLDAILFPTAPLVARPIGQDSSVIHNGTMLDTFKIYVRNVDPSSNAGLPGLSIPVCLTPDRLPVGMEIDGLADSDQRLLAIGGALEEAIGFRYFAGLPN", - "output": "hydrolase activity ; auxin biosynthetic process" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MNRKETRKVKVGNIYVGGDFRVSIQSMTNTDTKDVESTVKQIKELQEAGCDIVRCAVLDMDAACAIKDIVAKINIPLVADIHFDYRLALKAIENGVSAIRINPGNIGSREKVEAVVKACKEKNIPIRIGVNSGSLSKELLTKYGKPTPDALVESALEHVKILEELDFHDIVISMKSSNVETMIESYRIASQKTNYPLHLGVTEAGTPWRGTIKSAIGIGTLLAEGIGDTIRVSLTGDPVEEIKVGKEILKNFGYVKEGIEFISCPTCGRTQIDLINIAKEVEERLSSCKKNIKVAVMGCVVNGPGEAREADIGIAGGKGEGLIFRKGEIIKKVKEEDLVEELIKIIETI", - "output": "4 iron, 4 sulfur cluster binding ; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity ; iron ion binding ; isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway ; terpenoid biosynthetic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MKNEYLLLTPGPLSTSETVREAMLKDWCTWDDEYNKDIVEVIRTKLVKLATQQDGYTSVLMQGSGTASVEATIGSAIAKEGKLLVVDNGAYGARIAQIADYLNIPCHVVSPGETSQPHLNEVETALASDPAITHVAIVHCETTTGMLNPIEAFASVAKAHGKVVILDAMSSFGGIPIDIAELGIDFMISSANKCIQGVPGFGFVIAKQTELEKCQGQARSLSLDLYDQWHCMEVNHGKWRFTSPTHTVRAFYQALLELEQEGGIEARHNRYQTNQKTLVAGMRSLGFEPLLNDELHSPIITSFYSPTHSDYQFKAFYTRLKEQGFVIYPGKVSNADCFRIGNIGEVYPADIERLIGAIEKAMYWQVA", - "output": "2-aminoethylphosphonate-pyruvate transaminase activity ; organic phosphonate catabolic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MEFSVKSGSPEKQRSACIVVGVFEPRRLSPIAEQLDKISDGYISALLRRGELEGKPGQTLLLHHVPNVLSERILLIGCGKERELDERQYKQVIQKTINTLNDTGSMEAVCFLTELHVKGRNNYWKVRQAVETAKETLYSFDQLKTNKSEPRRPLRKMVFNVPTRRELTSGERAIQHGLAIAAGIKAAKDLGNMPPNICNAAYLASQARQLADSYSKNVITRVIGEQQMKELGMHSYLAVGHGSQNESLMSVIEYKGNPSEDARPVVLVGKGLTFDSGGISIKPAEGMDEMKYDMCGAAAVYGVMRMVAELQLPINVIGVLAGCENMPGGRAYRPGDVLTTMSGQTVEVLNTDAEGRLVLCDVLTYVERFEPEAVIDVATLTGACVIALGHHITGLMSNHNPLAHELISASEQAGDRAWRLPLGDEFQEQLESNFADIANIGGRPGGAITAGCFLSRFTRKYNWAHLDIAGTAWRSGKAKGATGRPVALLSQFLLNRAGFNGEE", - "output": "cytoplasm ; manganese ion binding ; metalloaminopeptidase activity ; proteolysis" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MNTLFIADLHLSAQEPAITAGFLRFLRQDAIHADALYILGDLFEAWIGDDDPEPLHGEIAAALKALQQAGVPCYFIHGNRDFLVGKRFARTSGMQLLPEEQVLDLYGRKILILHGDTLCTDDQAYQQFRRKVHNPLIQKLFLAMPLRWRLKIAAKMRARSQQSNQYKSDSIMDVNPQAVEQAMLRHKVHWMIHGHTHRPAVHELALSNGKAHRVVLGAWHVEGSMIKVSADAVELIQFPF", - "output": "cytoplasm ; extrinsic component of plasma membrane ; manganese ion binding ; UDP-2,3-diacylglucosamine hydrolase activity ; lipid A biosynthetic process" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MMGRVPDGPTGLAALVPSVEEAQAMLPPRRLRLLLSIAAVVLTLDIVTKVLAVKFLLPGKSVSIIGDTVTWTLVRNSGAAFSMATGYTWVLTLIATGVVIGIFWMGRRLVSSWWALGLGMILGGAMGNLVDRFFRAPAPLRGHVVDFLSIGWWPVFNVADPSVVVGAILLVVLSIFGFDFDTVGRRKAEFDIAGQRKAEQR", - "output": "plasma membrane ; aspartic-type endopeptidase activity ; proteolysis" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MEAVPGTPPPPPSESPPPPSPPPPSTPSPPPCSPDGRAATPHLLHHRLPLPDDREDGELEEGELEDDGAEEVQDPPGGQERSRKEKGEKHHSDSEEEKSHRRLKRKRKKEREKEKRRSKKRRKSKHKRHASSSDDFSDFSDDSDFSPSEKSHRKYRDYSPPYAPSHQQYSSSHNAPLPKKSYSKMDSKGYSMYEDYENEQYGEYEGDEEEDMGKEDYDDFTKELNQYRRAKEGSSRGRGSRGRGRGYRGRGSRGGSRGRGMGRGSRGRGRGSMGEHPEDEEDLYEEEIEYGESEEPMGDDDYDDYSKELNQYRRSKDSRGRGLSRGRGRGSRGGRGKGMGRGRGRGGRGGMSKGGMNDDEDFYDDDMGDGGGGSYRRSDHDKPHQQSDKKGKVICKYFVEGRCTWGDHCNFSHDIELPKKRELCKFYITGFCARAENCPYMHGDFPCKLYHTTGNCINGDDCMFSHDPLTEETRELLDKMLADDAEAGAEDEKEVEELKKQGINPLPKPPPGVGLLPTPPRPPGPPAPTSPNGRPMQGGPPPPPPPPPPPPGPPQMSLPTHEPLSPQQLQQDMYNKKIPSLFEIVVRPTGQLAEKLGVRFPGPGGPSGPMGPGPNMGPPGPMGGPMHPDMHPDMHPDMHPDMHPDMHPDMHPDMHPDMHPDMPMGPGMNPGPPMGPGGPPMMPYGPGDSPHSGMMPPIPPAQNFYENFYPQQEGMEMEPGLVGDAEDYGHYEELPGQPGEPLFPEHPLEPDSFPEGGPPGRPKAGAGVPDFLPSAQRALYLRIQQKQQEEERARRLAESSKQDRENEEGDTGNWYSSDEDEGGSSVTSILKTLRQQTSSRPQASVGEPSSSGLGDPRLQKGHPTGSRLSDPRLSRDPRLSRHAETSGGSGPGDSGPSDPRLARALPTSKAEGSLHSSPAGPSSSKGQPPAEEEEGERALREKAVNIPLDPLPGHPLRDPRSQLQQFSHIKKDVTLSKPSFARTVLWNPEDLIPLPIPKQDVPPVPAALQSLPALDPRLHRSTPPGPPNTRQRPGSTDPSTSGSNLPDFELLSRILKTVNVNTPGQSEKPSDPRVRKTPTDPRLQKPADPVAASRAAKPCPTEASPPAASPSGDSSPPATAPYDPRVLAAGGLGQGSSSGQSSVLSGISLYDPRTPNAGGKTAEPASDTSAQPKGPEGNGKGSASKAKEPPFVRKSALEQPETGKASTDGATATDRYNSYNRPRPKATAAPTAASSTPPPEGATPQPGVHNLPVPTLFGTVKPAPKTGTGSPFAGNSPAREGEQDAGSLKDVFKGFDPTASPFCQ", - "output": "chromosome ; cytosol ; nucleoplasm ; nucleus ; chromatin binding ; metal ion binding ; promoter-specific chromatin binding ; RNA binding ; DNA-templated transcription termination ; lncRNA catabolic process ; negative regulation of DNA-templated transcription, elongation ; negative regulation of lncRNA transcription ; nuclear RNA surveillance" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MKPTVVSADVLFEDHRAALKWQWVAGLGASERRFDEVAVRAARSGADLVGYLNYIHPYRVQILGEREVAYLTNESPDDCARRISRIITLEPPVLVVADDQTAPDTLLSMCERAQLPMFATPESAAFVIDVLRAYLSKHFADRTSMHGVFMDILGMGVMITGESGLGKSELGLELISRGHGLVADDAVDLYRINQTTIEGRCPELLQNLLEVRGIGLLDIKAIFGETAVRRKMRLKMIVHLVRRETLERDYERIPYEPLTQDVLGIPVRKVIIQVEAGRNIAVLVEAAVRNAILQLRGINTYQEFVERHRKAMEQDD", - "output": "ATP binding ; magnesium ion binding ; phosphorelay sensor kinase activity ; protein serine/threonine kinase activity ; protein serine/threonine/tyrosine kinase activity ; regulation of carbohydrate metabolic process" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MNSVSAAERLKSFGDAGPVCNKSIIFPSRVVTLANSFEKKDRSWYVKSQIPTDLSIQVNDITFKAHKFPLISKCGYISSIELKPSTSENGYHLKLENFPGGADTFETILKFCYNLPLDLNPLNVAPLRCASEYLYMTEEFEAGNLISKTEAFITFVVLASWRDTLTVLRSCTNLSPWAENLQIVRRCCDLLAWKACNDNNIPEDVVDRNERCLYNDIATLDIDHFMRVITTMKARRAKPQITGKIIMKYADNFLPVINDDLEGIKGYGLGKNELQFSVNRGRMEESNSLGCQEHKETIESLVSVLPPQSGAVSCHFLLRMLKTSIVYSASPALISDLEKRVGMALEDANVCDLLIPNFKNEEQQERVRIFEFFLMHEQQQVLGKPSISKLLDNYLAEIAKDPYLPITKFQVLAEMLPENAWKCHDGLYRAIDMFLKTHPSLSDHDRRRLCKTMNCEKLSLDACLHAAQNDRLPLRTIVQINTQVLFSEQVKMRMMMQDKLPEKEEENSGGREDKRMSRDNEIIKTLKEELENVKKKMSELQSDYNELQQEYERLSSKQKSSHNWGLRWQKVKKSFQTKREDEETRERTRRRSSTGQRTSFRRRMSMS", - "output": "cotyledon vascular tissue pattern formation ; leaf vascular tissue pattern formation ; phloem or xylem histogenesis ; primary root development ; protein ubiquitination ; shoot system development" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MAAAGQEKGYLTQTAAALDKSPSLSPQLAAPIRGRPKKCLVYPHAPKSSRLSRSVLRWLQGLDLSFFPRNINRDFSNGFLIAEIFCIYYPWELELSSFENGTSLKVKLDNWAQLEKFLARKKFKLPKELIHGTIHCKAGVPEILIEEVYTLLTHREIKSIQDDFVNFTDYSYQMRLPLVSRSTVSKSIKDNIRLSELLSNPNMLTNELKAEFLILLHMLQRKLGRKLNPEWFDVKPTVGEVTLNHLPAQASGRRYNLKVKRGRVVPVLPNIGSGGSSHREIHVKQAGQHSYYSAMKPIRNMDKKP", - "output": "axoneme ; nucleus ; microtubule binding ; regulation of cytoskeleton organization" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MMKAEAAGSLPKTNAEAVRKKPGRKRYGWMKGLLLPAVIIAIWQVIGGLGVVSATVLPTPVTIVLTFKELILSGELFGHLQISIYRAALGFLLGAGLGLMIGILAGFSKRTELYLDPSLQMLRTVPHLAVTPLFILWFGFDEVSKILLIALGAFFPVYINTFNGIRGVDAKLFEVARVLEFKWHQQISKVILPAALPNILLGIRLSLGIAWLGLVVAELMGSSSGVGYMIMDARQFSQTNKVFAGIIIFAVVGKLTDSFVRLLERKLLKWRNSYEG", - "output": "plasma membrane ; alkanesulfonate transmembrane transporter activity ; alkanesulfonate transport" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MFGFHKPKMYRSIEGCCICRAKSSSSRFTDSKRYEKDFQSCFGLHETRSGDICNACVLLVKRWKKLPAGSKKNWNHVVDARAGPSLKTTLKPKKVKTLSGNRIKSNQISKLQKEFRRHNSDAHSTTSSASPAQSPCYSNQSDDGSDTEMASGSNRTPVFSFLDLTYWKRQKICCGIIYKGRFGEVLIDTHLFKPCCSNKKAAAEKPEEQGPEPLPISTQEW", - "output": "Sin3 complex ; negative regulation of cell differentiation ; negative regulation of cell migration ; positive regulation of cell population proliferation" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MMNFSDPCLLGPSACNEDFFEELAREILPTPEAKALAARLLRRLGWHPSEGQCSWCPEAYEYLYDLQFRYTGPVPLVRKHPGSALIVRWMLDGLGHFLFCRPRVQGNPLTYHLSCMGSAIRTLELFREQAHSHLWEQGNLVDCYWSCSSDYGYEGKWGQQAVVRGALSGPWPRPDPPSLQLQCLCAIWRTCLLRGQSQAQKYTNWICARHLQLRPDTSTRDSDLLLQRC", - "output": "host cell cytoplasm ; suppression by virus of host NF-kappaB cascade" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MKGKFIVIEGLEGAGKSTAVNTVQQFLRHFKIQDVICTREPGGTALSEEIRHLIKKKSQNEEILTDKAELLLLYAARVQLLENIIKPALSSGTWVIGDRHDLSSQAYQGGGRGIKSEFIKSLADFTLGSSFRPDLTLYLDLPPELGLQRARKRGHLDRIEQQSLVFFERIRARYLELTYDDPRIKMIDASKPIKKVTVDIQNALLSLLEK", - "output": "ATP binding ; thymidylate kinase activity ; dTDP biosynthetic process ; dTTP biosynthetic process ; phosphorylation" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MSINKTLKIATRQSPLALWQANYVKNRLQQRYSHLSVELVPIITKGDVILDTPLAKIGGKGLFVKELENALLNGEADIAVHSMKDVPMQFPKGLELSVICPREDPRDAFVSNKYRTLDELPQGAIVGTSSLRRQCQLKNWRADLDIRSLRGNVGTRLNKLDQGDYDAIILASAGLIRLGLTERIRSFIEIDTILPACGQGAVGIECRVDDRDVQSLLMPLADQTTTYCVLAERAMNFHLQGGCQVPIGAYAILENNQLYLRGLVGDVHGSQILSAEGQFELSLDFESSQSAVQKAEELGVSIAEQLLQQGADKILQAVYQS", - "output": "hydroxymethylbilane synthase activity ; peptidyl-pyrromethane cofactor linkage ; protoporphyrinogen IX biosynthetic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MSEVVQSVDPINFTEAASLKVKELIEEEGDNSLSLRVYITGGGCSGFQYAFAFDNEVKEDDMVITKNGVRLLVDSMSFQYLVGADVDYKDDVEGAYFVIRNPNAKTTCGCGSSFSV", - "output": "2 iron, 2 sulfur cluster binding ; iron ion binding ; iron-sulfur cluster assembly" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MCAKSLLLVFGILLGLSHLSLSQNWATFQQKHIINTPIINCNTIMDNNIYIVGGQCKRVNTFIISSATTVKAICTGVINMNVLSTTRFQLNTCTRTSITPRPCPYSSRTETNYICVKCENQYPVHFAGIGRCP", - "output": "extracellular region ; carbohydrate binding ; endonuclease activity ; nucleic acid binding" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MNPLISAASVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALALLFANPFV", - "output": "chloroplast thylakoid membrane ; proton-transporting ATP synthase complex, coupling factor F(o) ; lipid binding ; proton-transporting ATP synthase activity, rotational mechanism" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "DSTDGLLVKDKYLCGDLYGEEYGVIFPYLGLKTECLWTIKMDPLYRILLTVRDVHENCNKESLEIIEGPPESSNSRKICDTSHAEYTSCTNTMTVKYTRKPNHPAPDFFLIFRRVL", - "output": "extracellular region ; single fertilization" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MQIHRLPAFSDNYIFVLHDPGQNIAAVVDPADPQPVLKKLAELGAELVAIFNTHHHSDHVGGNRTLLQAFPNTVVYGGEQDRGRIPGQQHFLKEGDQVSFAHRRAEVYFVPGHTRAHIAYYFPPTTGEEWGELFCGDTLFAGGCGRLFEGTPAQMVDSLSKLRNLPETTRVWCAHEYTLKNLQFALTVDSDNSHLKNRFKQVQNARNLSQPTVPSDIGLEKQTNPFLRWDQPHLIIHTKSNTPVQCFARLRGMKDQF", - "output": "hydroxyacylglutathione hydrolase activity ; metal ion binding ; methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MSDSQTLVVKLGTSVLTGGSRRLNRAHIVELVRQCAQLHAAGHRIVIVTSGAIAAGREHLGYPELPATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDTLRALLDNNIVPVINENDAVATAEIKVGDNDNLSALAAILAGADKLLLLTDQQGLFTADPRNNPQAELIKDVHGIDDALRAIAGDSVSGLGTGGMGTKLQAADVACRAGIDTIIAAGSRPGVIGDVMEGISVGTLFHAEATPLENRKRWIFGAPPAGEITVDEGATAAILERGSSLLPKGIKSVTGNFSRGEVIRICNLEGRDIAHGVTRYNSDALRRIAGHHSQQIDAILGYEYGPVAVHRDDMIIR", - "output": "cytoplasm ; ATP binding ; glutamate 5-kinase activity ; RNA binding ; L-proline biosynthetic process ; phosphorylation" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MLDLIQTRRDLHQIPEIGLEEFKTQAYLLDVIEKLTTGKDFVQIRTWRTGILVYLQGSQPERTIGWRTDIDGLPIVEQTGLLFASQHQGRMHACGHDFHMTIALGCLERALEEQPKNNLLFLFQPAEENEAGGMLMYEDGAFGDWLPDQFYGLHVRPDLKVGQIATNTHTLFAGTCEVKIRFKGKGGHAAFPHEANDALVVASYFVTQVQSVVSRNVNPIEGAVVTFGVFQAGTTNNVITDTAFLHGTIRALTQDMSLLVQKRVKTVAEGVAAAFDMEVEVELKQGGYLPVENNPALARELMDFFDEKDGIELIDIEPAMTGEDFGYLLSKVDGVMFWLGIDSPYALHHPQMSPKEEVLAIGVAAVSSFLKKKAAE", - "output": "N-acetyldiaminopimelate deacetylase activity ; diaminopimelate biosynthetic process ; lysine biosynthetic process via diaminopimelate" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MVTGLSPLLFRKLSNPDIFAPTGKVKLQRQLSQDDCKLRRGSLASSLSGKQLLPLSSSVHSSVGQVTWQSTGEASNLVRMRNQSLGQSAPSLTAGLKELSLPRRGSFCRTSNRKSLIVTSSTSPTLPRPHSPLHGHTGNSPLDSPRNFSPNAPAHFSFVPARRTDGRRWSLASLPSSGYGTNTPSSTVSSSCSSQEKLHQLPFQPTADELHFLTKHFSTENVPDEEGRRSPRMRPRSRSLSPGRSPVSFDSEIIMMNHVYKERFPKATAQMEERPSLTFISSNTPDSVLPLADGALSFIHHQVIEMARDCLDKSRSGLITSHYFYELQENLEKLLQDAHERSESSDVAFVIQLVKKLMIIIARPARLLECLEFDPEEFYHLLEAAEGHAKEGHGIKCDIPRYIVSQLGLTRDPLEEMAQLSSYDSPDTPETDDSVEGRGVSQPSQKTPSEEDFETIKLISNGAYGAVFLVRHKSTRQRFAMKKINKQNLILRNQIQQAFVERDILTFAENPFVVSMFCSFETKRHLCMVMEYVEGGDCATLLKNIGALPVDMVRLYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDAREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDEIVWPEGDDALPPDAQDLTSKLLHQNPLERLGTSSAYEVKQHPFFMGLDWTGLLRQKAEFIPQLESEDDTSYFDTRSERYHHVDSEDEEEVSEDGCLEIRQFSSCSPRFSKVYSSMERLSLLEERRTPPPTKRSLSEEKEDHSDGLAGLKGRDRSWVIGSPEILRKRLSVSESSHTESDSSPPMTVRHRCSGLPDGPHCPEETSSTPRKQQQEGIWVLIPPSGEGSSRPVPERPLERQLKLDEEPPGQSSRCCPALETRGRGTPQLAEEATAKAISDLAVRRARHRLLSGDSIEKRTTRPVNKVIKSASATALSLLIPSEHHACSPLASPMSPHSQSSNPSSRDSSPSRDFLPALGSLRPPIIIHRAGKKYGFTLRAIRVYMGDTDVYTVHHMVWHVEDGGPASEAGLRQGDLITHVNGEPVHGLVHTEVVELVLKSGNKVSISTTPLENTSIKVGPARKGSYKAKMARRSKRSKGKDGQESRKRSSLFRKITKQASLLHTSRSLSSLNRSLSSGESGPGSPTHSHSLSPRSPPQGYRVAPDAVHSVGGNSSQSSSPSSSVPSSPAGSGHTRPSSLHGLAPKLQRQYRSPRRKSAGSIPLSPLAHTPSPPATAASPQRSPSPLSGHGSQSFPTKLHLSPPLGRQLSRPKSAEPPRSPLLKRVQSAEKLAAALAAAEKKLAPSRKHSLDLPHGELKKELTPREASPLEVVGTRSVLSGKGPLPGKGVLQPAPSRALGTLRQDRAERRESLQKQEAIREVDSSEDDTDEEPENSQATQEPRLSPHPEASHNLLPKGSGEGTEEDTFLHRDLKKQGPVLSGLVTGATLGSPRVDVPGLSPRKVSRPQAFEEATNPLQVPSLSRSGPTSPTPSEGCWKAQHLHTQALTALCPSFSELTPTGCSAATSTSGKPGTWSWKFLIEGPDRASTNKTITRKGEPANSQDTNTTVPNLLKNLSPEEEKPQPPSVPGLTHPLLEVPSQNWPWESECEQMEKEEPSLSITEVPDSSGDRRQDIPCRAHPLSPETRPSLLWKSQELGGQQDHQDLALTSDELLKQT", - "output": "anchoring junction ; cytoplasm ; membrane ; microtubule cytoskeleton ; ATP binding ; magnesium ion binding ; microtubule binding ; phosphatase binding ; protein serine kinase activity ; protein serine/threonine kinase activity ; cytoskeleton organization ; intracellular signal transduction ; peptidyl-serine phosphorylation ; protein phosphorylation ; regulation of interleukin-12 production ; spermatid differentiation" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MAERTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVAETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVNVLNAAKTTPIIIADDTDASEDVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLVPSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQPEFTQIDIEASFLTQDEILDMMERMMTKVMKDAKGVEVSAPFPRMKYADAMARYGSDKPDTCFEMELTDLSEFAADCGFKVFTSAVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWLKVEEDGLKGPIAKFFGEEDANVLMSTLEATAGDLLLFVADKKSVVADSLGALRLRLGKELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQAYDLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIALGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELNLKLSLKEEK", - "output": "cytoplasm ; aspartate-tRNA ligase activity ; aspartate-tRNA(Asn) ligase activity ; ATP binding ; nucleic acid binding ; transferase activity ; aspartyl-tRNA aminoacylation" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MMRQSLQAVLPEISGNKTSLLRKSVCSDLLTLFNSPHSALPSLLVSGMPEWQVHNPSDKHLQSWYCRQLRSALLFHEPRIAALQVNLKEAYCHTLAISLEIMLYHDDEPLTFDLVWDNGGWRSATLENVS", - "output": "cytoplasm ; anti-sigma factor antagonist activity ; cellular response to oxidative stress ; DNA damage response" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MLDREGFRPNVGIVLLNQRNQVFWGKRIRTHSWQFPQGGIKYGETPEQAMYRELHEEVGLQPEHVRILARTRDWLRYEVPDHYIRREARGHYRGQKQIWFLLQLTGRDNDMNLRACDHPEFDAWRWNEYWVPLEVVIDFKRDVYQMALTELARFLPRANHHNRYLRSGMRAHRREDEERSNGEAPMEAADGETTPEGPR", - "output": "pyrophosphatase activity" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MKILSVLLLALIICSIVGWSEAQFTNVSCTTSKECWSVCQRLHNTSRGKCMNKKCRCYS", - "output": "extracellular region ; ion channel inhibitor activity ; potassium channel regulator activity ; toxin activity ; defense response to bacterium ; defense response to fungus ; killing of cells of another organism" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MASTWAIQAHMDQDERLEVKIEEKKYTTRQDWDLHKNNTHSREVFRQYFRQFCYQETSGPREALSRLRELCHQWLRPETHTKEQILELLVLEQFLTILPEELQAWVQEQHPESGEEVVTVLEDLERELDEPGEQVSAHTGEHEMFLQKMVPLGKEGEPSMPLQSMKAQLKYESPELESQQEQVLDVETGNEYGNLKQEVSEEMKPHGNTSSKFENDMSQSARCGETHEPEEITEEPSACSREDKQPTCDENGVSLTENSDHTEHQRICPGEKSYGCDDCGKTFSQHSHLTEHQRIHTGDRPYKCEECGKAFRGRTVLIRHKIIHTGEKPYKCNECGKAFGRWSALNQHQRLHTGEKHYHCNDCGKAFSQKAGLFHHIKIHTRDKPYQCTQCNKSFSRRSILTQHQGVHTGAKPYECNECGKAFVYNSSLVSHQEIHHKEKCYQCKECGKSFSQSGLIQHQRIHTGEKPYKCEVCEKAFIQRTSLTEHQRIHTGERPYKCDKCGKAFTQRSVLTEHQRIHTGERPYKCDECGNAFRGITSLIQHQRIHTGEKPYQCDECGKAFRQRRKTSYKEILLKNHSEPQAGVNLLLSSLIPEWQSCCRKDL", - "output": "nucleus ; DNA binding ; metal ion binding" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MTDNTRLRIAMQKSGRLSDDSRELLARCGIKINLHTQRLIAMAENMPIDILRVRDDDIPGLVMDGVVDLGIIGENVLEEELLNRRAQGEDPRYFTLRRLDFGGCRLSLATPVDEAWDGPLSLNGKRIATSYPHLLKRYLDQKGISFKSCLLNGSVEVAPRAGLADAICDLVSTGATLEANGLREVEVIYRSKACLIQRDGEMEESKQQLIDKLLTRIQGVIQARESKYIMMHAPTERLDEVIALLPGAERPTILPLAGDQQRVAMHMVSSETLFWETMEKLKALGASSILVLPIEKMME", - "output": "cytosol ; ATP binding ; ATP phosphoribosyltransferase activity ; magnesium ion binding ; histidine biosynthetic process" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MGIARILSAVLFLSVLFVVTFPALLSADHHDGRIDTCRLPSDRGRCKASFECWYFNGRTCAKFIYGGCGGNGNKFPTQEACMKRCAKA", - "output": "extracellular region ; potassium channel regulator activity ; serine-type endopeptidase inhibitor activity ; toxin activity ; envenomation resulting in negative regulation of voltage-gated potassium channel activity in another organism ; negative regulation of peptidase activity" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MPLMNPLNPWPLESSNPLIAVLVSGGIDSLVAAHLLKQSGADVTAIHFLTGYEPEDRAGRLEKLFTQMDIPVFIFDCRTVFQSNVVDYFTAAYLRGETPNPCMVCNSRIKFGACMDYARSLGADAVATGHYCRTTKDPDGVRLWKGADPAKEQSYFLAFLSQDQLGRARFPLERMTKDQVRAHAARHGLVPIESKESQDVCFIRGEECADFIEAQVPAIPGPGPIEDMTGRLIGTHSGLHRFTVGQRRGINCPAEQPYYVAALDMARNCLKVGFRQDLFVPVCRVAQVNWIPDRPKGSMNVSVKIRYNQTEVPARLTALGETDAVVEFVTPQFAVAPGQGAVFYDGDAVLGGGIIRAE", - "output": "cytoplasm ; ATP binding ; sulfurtransferase activity ; tRNA binding ; tRNA modification" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MTDMYSLFVAFILGVVEGLTEFLPVSSTGHMIIVGELLGFTGDKAKTFEVIIQLGSILAVVVVFWRRLFGLIGIHFGAVPHEGKTNGHLTLGHILLAMIPAVILGLAFHDVIKALFDPKSVMYALVAGGVLLLAAEWLKPKNPKAVGLDDITYRQAFAIGCFQCLALWPGFSRSGATISGGMLVGVNRYAASEFSFILAVPMMIGASGLDLYKSLHFLTLGDLPMFAVGFITAFIVALIAIKTFLSLIKRISFVPFAIYRFIVAAVVYWVFM", - "output": "plasma membrane ; undecaprenyl-diphosphatase activity ; cell wall organization ; dephosphorylation ; peptidoglycan biosynthetic process ; regulation of cell shape ; response to antibiotic" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MLGVSGMQPRQLAAQILNFALVLSTAFMMWKGLSVVSDSSSPIVVVLSGSMEPAFQRGDLLFLWNRGLDTQVGEIVVYNVKGKDIPIVHRVVRRYGGGKTPLRLLTKGDNNIADDTELYATSQSFLTRKEDVVGSVVGFIPFVGYVTILLSENPWMKQVMLGLMGVMVVLQRE", - "output": "signal peptidase complex ; serine-type endopeptidase activity ; protein targeting to ER ; signal peptide processing" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MASERHHSIDAQLRALAPGKVSEELIQYDALLVDRFLDILQDLHGPSLREFVQECYEVSADYEGKKDTSKLGELGAKLTGLAPADAILVASSILHMLNLANLAEEVELAHRRRNSKLKHGDFSDEGSATTESDIEETLKRLVSLGKTPAEVFEALKNQSVDLVFTAHPTQSARRSLLQKNARIRNCLTQLSAKDVTVEDKKELDEALHREIQAAFRTDEIRRAQPTPQDEMRYGMSYIHETVWNGVPKFLRRVDTALKNIGINERLPYDVPLIKFCSWMGGDRDGNPRVTPEVTRDVCLLSRMMAANLYINQVEDLMFELSMWRCNDELRARAEEVQSTPASKKVTKYYIEFWKQIPPNEPYRVILGAVRDKLYNTRERARHLLATGFSEISEDAVFTKIEEFLEPLELCYKSLCECGDKAIADGSLLDLLRQVFTFGLSLVKLDIRQESERQTDVIDAITTHLGIGSYRSWPEDKRMEWLVSELKGKRPLLPPDLPMTEEIADVIGAMRVLAELPIDSFGPYIISMCTAPSDVLAVELLQRECGIRQTLPVVPLFERLADLQAAPASVEKLFSTDWYINHINGKQQVMVGYSDSGKDAGRLSAAWQLYVAQEEMAKVAKKYGVKLTLFHGRGGTVGRGGGPTHLAILSQPPDTINGSIRVTVQGEVIEFMFGEENLCFQSLQRFTAATLEHGMHPPVSPKPEWRKLMEEMAVVATEEYRSVVVKEPRFVEYFRSATPETEYGKMNIGSRPAKRRPGGGITTLRAIPWIFSWTQTRFHLPVWLGVGAAFKWAIDKDIKNFQKLKEMYNEWPFFRVTLDLLEMVFAKGDPGIAGLYDELLVAEELKPFGKQLRDKYVETQQLLLQIAGHKDILEGDPYLKQGLRLRNPYITTLNVFQAYTLKRIRDPSFKVTPQPPLSKEFADENKPAGLVKLNGERVPPGLEDTLILTMKGIAAGMQNTG", - "output": "cytoplasm ; phosphoenolpyruvate carboxylase activity ; carbon fixation ; photosynthesis ; tricarboxylic acid cycle" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MVVDDSAVVRQVVAGLLADDPAIEVIAAVADPILAIARMKVQWPDVFVLDIEMPRMDGITFLKKIMAERPTPVVICSTLTEKGAQTSMAALSAGAVAIITKPKLGLKQFLVDASDDLISAVKAAARANVKRLQVVEKLTADAILPASDRHDAMLQTTERVVALGTSTGGTQALEVVLTALPRVTPGIVIVQHMPEKFTAEFANRLNGLCQITVREAKNNDRVVPGRALIAPGGKHMLLRRNGAQYSVEVLDGPLVNRHRPSVDVLFRSVARCAGANALGVIMTGMGDDGAAGLAEMRKAGARTLAQDEESCVVYGMPKEAVKRGGVERSVPLGAIAREIMAQMAG", - "output": "cytoplasm ; phosphorelay response regulator activity ; protein-glutamate methylesterase activity ; protein-glutamine glutaminase activity ; chemotaxis ; protein deamination ; protein demethylation" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MQETSLTKAVSPRQSLGQILLNYYQLTKPRLIVLFLITTAAGMWVAARGEVDPVLALITLLTGAMAAGSANTINCLYDRDIDYIMERTRHRPLPSGRVQPWEALVFAIALAVGAFSLQTLCANLLSACLEMAGIAVYVGVYTHWLKRSSTQNIVIGGAAGAIPPLVGWAAVTGELSWAAWVLFAIIFIWTPPHFWPLAMLIQEDYAKVNVPMMPVVDGDRPTAWQIFGYTLVLLPTTLLLVYPLHACGLIYGAIALVLGVVFIRKAWELVQTPEDKDQARAVFKFSILYMMILCAAMGIDSLPLTHAVVSQVTANLQTLVGTIL", - "output": "plasma membrane ; protoheme IX farnesyltransferase activity ; heme O biosynthetic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MKVGVALSGGVDSAVALYLLLKEGHEVKAFHMKTKEDEFFLKKEIKKKVCCSPSDTADAIRIARSLGVEIEIVDVREVFREKVIEPFKRDLLRGLTPNPCVHCNRYVKFGYFMDYVLSQGFDAFASGHYARVEFSGKYGKKVIKKGVDGKKDQSYFLARIEPWRIEKLLFPNGIYTKEEIRRIAEEAGIHVAKKQESQDVCFIPDGSIENFLKDEGITLSEGKVITEKGEVVGHHRGYPLYTVGQRKGLKIEKFGERLYVREKIPESNVVVVSGLEDVFFSGLIAEDPVWHVEVPEEFRCVCRVRKKSEEAPAVVRVRDNEVEVRFEKKVFAVTPGQIAAFYDEDTLLGGAIIKEGIR", - "output": "cytoplasm ; ATP binding ; sulfurtransferase activity ; tRNA binding ; tRNA modification" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MDAVIDTSVIIEIFRGNKDTLYQICDYNCKITSITVFELYCGNLKENEMIMIDSLPKLNFDDKSSKIAGNIFKKLKKEGKIPSVKDLLIASIFY", - "output": "metal ion binding ; ribonuclease activity" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MSKFRSLADIRRDYGELQLSEESAENDPISQFKLWFDDVLLNEKNDPTAMVLSTVDEKGYPDSRVVLLKGLENGNFIFYTNYQSAKAMQIQKNPYAALNFYWPQMARQVRVRGRVKKISSEQSDAYFSSRPLKSQFSAIVSPQSQEILDRISLEDALNQLIEEYGQKPVVRPENWGGYMIIPDEIEFWQGRDNRLHDRIHYYRHGHEWTHRRLAP", - "output": "FMN binding ; pyridoxamine-phosphate oxidase activity ; pyridoxine biosynthetic process" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MQSWYCPPVPVLPGRGPQLRLYDSADRQVRPVAPGSKATMYVCGITPYDATHLGHAATYVTFDLIHRLWLDLGHELHYVQNITDIDDPLFERADRDGVDWRDLAQAEVALFCEDMAALRVLPPQDYVGATEAIAEMVELIEKMLACGAAYVIDREMGEYQDIYFRADATLQFGYESGYDRDTMLRLCEERGGDPRRPGKSDELDALLWRAARPGEPSWPSPFGPGRPGWHVECAAIALSRIGSGLDIQGGGSDLIFPHHEFTAAHAECVSGERRFARHYVHAGMIGWDGHKMSKSRGNLVLVSALRAQDVEPSAVRLGLLAGHYRADRFWSQQVLDEATARLHRWRTATALPAGPAAVDVVARVRRYLADDLDTPKAIAALDGWVTDAVEYGGHDAGAPKLVATAIDALLGVDL", - "output": "ATP binding ; cysteine-glucosaminylinositol ligase activity ; zinc ion binding ; mycothiol biosynthetic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MTKHIKILVIGVGVAGPAVAYWLKRFGFSPVLIEKSAAVRKGGQALDIRGIATHIAKEMGIYDQICNMRTQIKCGRYVDVKGNVLHEEQGETFGFRQDDEVEILRGDLVEILMKAIADIPCEFKQSVIKIEQNEDSVTVTYKDGRVENYDLVIAADGIHSATRGMVFSKNEYQLINLGSYVSAFTIPNYLGLDHMELLCESNHKLVTLQSDSQADKAMAGFMFRSKHVLEDIRDEQEQKHFLHASFQNFGWETQNILNRMPESDDFYFDAITQIKMKSWTKGRIALIGDAAYCPSPLSGQGNNLAFVGAYILAGELKKADGDYIQAFTRYNELLHPFVEANQQFGVWVSESFLLKDDEVSKEIAEARSNKILAMIKSVSNSINLPQYE", - "output": "FAD binding ; oxidoreductase activity ; response to antibiotic" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MSQLVYFSSSSENTQRFIERLGLPAVRIPLNERERIQVDEPYILIVPSYGGGGTAGAVPRQVIRFLNDEHNRALLRGVIASGNRNFGEAYGRAGDVIARKCGVPWLYRFELMGTQSDIENVRKGVTEFWQRQPQNA", - "output": "FMN binding ; protein modification process" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MGLFGKTQEKPPKELVNEWSLKIRKEMRVVDRQIRDIQREEEKVKRSVKDAAKKGQKDVCVVLAKEMIRSRKAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPEIRATMRELSKEMMKAGIIEEMLEDTFESMDDQEEMEEAAEMEIDRILFEITAGALGKAPSKVTDALPEPEPSGAMAASDEEEEEEEALEAMQSRLATLRS", - "output": "amphisome membrane ; cytosol ; kinetochore ; kinetochore microtubule ; lysosomal membrane ; midbody ; multivesicular body membrane ; nuclear pore ; autophagosome maturation ; late endosome to lysosome transport ; midbody abscission ; mitotic metaphase plate congression ; multivesicular body sorting pathway ; negative regulation of cell death ; nuclear membrane reassembly ; plasma membrane repair ; protein transport ; regulation of mitotic spindle assembly ; ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway ; viral budding from plasma membrane ; viral budding via host ESCRT complex" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MLDEKSSNTASVVVLCTAPDEATAQDLAAKVLAEKLAACATLIPGATSLYYWEGKLEQEYEVQMILKTTVSHQQALLECLKSHHPYQTPELLVLPVTHGDTDYLSWLNASLR", - "output": "cytoplasm ; copper ion binding ; response to metal ion" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MTQLTHINTAGEAHMVDVSAKNETVREARAEAFVDMQAATLAMIIDGSHHKGDVFATARIAGIQAAKKTWELIPLCHPLLLTKVEVKLEAQPEHNRVRIETCCRLTGKTGVEMEALTAASVAALTIYDMCKAVQKDMIIGPVRLLTKSGGKSGDFKVDI", - "output": "cyclic pyranopterin monophosphate synthase activity ; Mo-molybdopterin cofactor biosynthetic process" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MVQKEMINKKISQDNSFIQNNNLADFDFLDAKKNSEIKTVSTGSLHLDEALGTGGLPLGRIVELYGNESSGKTTVALHAVASFQKAGKVACYIDAEGALDLSYAKAIGIDLGKLLVAHPKHGENAFALMESLIKTNKVALIVVDSVAALIPKQELEGNMDDQTIGLHARMMSKGLRRVQSLLPESDTCLLFINQLREKPGVMFGNGEVTTGGRALKFYASMRMEAKRSELLKDRFGNYVGIKSKLTVSKNKVARPFGVAFLEIMFNRGIVYEHEVIELALKHNVVVRSDNAYSFKSQNIAIGKEKLFSVLAEKPELFEQIKQLTIKQIHSPPPPAS", - "output": "cytoplasm ; ATP binding ; ATP-dependent DNA damage sensor activity ; damaged DNA binding ; single-stranded DNA binding ; DNA recombination ; DNA repair ; SOS response" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MSAPTTSSSTDEDFAKPVKNGKTFANPKSFTNWGGIPGISDGFKFAFTETNHENVPCDKKILDVEIPVHNITADDFHSESDLFATWLGHATVLVDLEGVKFVTDPVWADRASFTSFAGPKRYRPPPMKLEDLPDLDFAVVSHDHYDHLDADAVKKITDRNPQIKWFVPLGMKKWMEGQGIGVDGSSTAVTELNWGESSEFVKNGKTYTIWCLPAQHWGQRGLFDRNHRLWSGWAVIGENRRFYYSGDTGHCDGEFKKFGEKLGPFDLAAIPIGAYEPRWFMKSQHINPEEAIEVHKLIRAKNSIGIHWGTYHMGSTEYYLEPRDKLKELMDAREDLKNTSFVTIEMGRIWEASDQ", - "output": "cytoplasm ; membrane-bounded organelle ; neuron projection ; N-acetylphosphatidylethanolamine-hydrolysing phospholipase activity ; N-acylphosphatidylethanolamine-specific phospholipase D activity ; zinc ion binding ; N-acylethanolamine metabolic process ; N-acylphosphatidylethanolamine metabolic process ; phospholipid catabolic process" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MRLDVVSKAARAAQRFSAQCHGQKFRTAHASATLRAALAVEASEANQKGRSAGLLAAMALMGVAGVASMDDNAAAKCEGAAKPVSREAVTQAMLKEVVTKLNRIESAVANPHRHTDGLNVGVDVVLGAQWGDEGKGKLVDSLSQSYDVIVRVAGGSNAGHTIVHEGKKYKFHLVPSGILNPNAICIIGNGVVVHLPSFLEELEELKRMGVDYEGRILISDRAHMVLDLHQEVDGINELRRGRNKIGTTKKGIGPAYSSKMLRNGVRVGDLRYFDDFTEKMVDLVKFYKDNYPELEADAEAEIKVYSDMKDKILDMTVDTVSYLNNAYVAGKKILVEGANATMLDIDFGTYPYVTSSNPSIGSVCTGGGISPNRLNGIIGIVKAYCTRVGEGPFPTELHDDVGEHLGTVGAEFGTTTGRARRCGWLDIPQMRYSNMVNGFTELNLTKLDVLTGLKKVKIGVAYWHEGKKLDGMPSNLQLLQDSVVEYEEMEGWSEDISKCKTFEELPVAAQKYVLRVEELLGTHIKWIGVGPDRFDVITRTHPLEKAYISGN", - "output": "cytoplasm ; adenylosuccinate synthase activity ; GTP binding ; magnesium ion binding ; 'de novo' AMP biosynthetic process" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MLYSLARPMLFSLAPERAHELTLSMLDKAHKLGMMRQTVEAKPTTCMGIEFPNPVGLAAGLDKNGAHIDALAGLGFGFIEIGTITPRPQSGNPKPRLFRIPEAKAIINRMGFNNDGVDKLIENVKASKFRGILGINIGKNADTPVEKAVDDYLICLEKVYNYASYITVNISSPNTKNLRSLQSGDALTELLQTLKARQLELAEQYNHYVPLVLKVAPDLTAEDVEFISAQLLDFKIDGLIVTNTTLSREGVENLPYGNESGGLSGAPVFEKSTECLRLFAQTLKGQIPLIGVGGILSGEQAAAKQQAGATLVQIYSGLIYTGPTLVKQCVEAMT", - "output": "cytoplasm ; plasma membrane ; dihydroorotate dehydrogenase (quinone) activity ; 'de novo' pyrimidine nucleobase biosynthetic process ; 'de novo' UMP biosynthetic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MKTKTDFLKMKEQGEPITMLTAYDYPSAKLAEEAEVDMILVGDSLGMVVLGYDSTVPVTVEDMIHHTKAVRRGAKETFIVTDMPFMSYHVSLQETMMNARRIVQESGAHALKVEGAGEVISTIQYLTNAGIPVVAHLGLTPQSVGVLGGYKVQGKDAESAKKLIEDAKKCEEAGAIALVLECVPMQLAELISEQLTIPTIGIGAGQKVDGQVLVYHDLISYGVNRVPKFVKQYTSVQEEIVRGISQYVTEVKTRQFPEEKHSFTMKEEDRLALYGGKQ", - "output": "cytoplasm ; 3-methyl-2-oxobutanoate hydroxymethyltransferase activity ; metal ion binding ; pantothenate biosynthetic process" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MTRGLELLIAQTILQGFDAQYGRFLEVTSGAQQRFEQADWHAVQQAMKQRIHLYDHHVGLVVEQLRCITEGKSTDVDFLLRVKQQYTQLLPDYPRFEIAESFFNSVYCRLFDHRSLTPERLFIFSSQPERPFRTLPRPLAKDFFPERGWSHLLGKVLSDLPLRLPWQNKARDIGYIIASLQEALGEELLATCHLQVANELFYRNKAAWLVGKLVMPMATLPFLLPIHRSEEGELFVDTCLTTHAEASIVFGFARSYFMVYAPLPGALVEWLREILPGKTTAELYMAIGCQKHAKTESYREYLHYITRCDEQFIEAPGIRGMVMLVFTLPGFDRVFKVIKDRFAPQKEMTAAHVRACYQLVKEHDRVGRMADTQEFENFVLDKRQIAPALLALLQAEAGNKLTDLGDRIVISHLYIERRMVPLNLWLEQVNGQALRDAVEEYGNAIRQLAAANIFPGDMLFKNFGVTRHGRVVFYDYDEICYMTEVNFREIPPPRYPEDELASEPWYSVSPGDVFPEEFRHWLCADPRIGPLFEEMHADLLRADYWRALQMRIKNGHVEDVYAYRRKQRFSVRYGADSRPDKAFTPPSGKVRRSA", - "output": "cytoplasm ; kinase activity ; ATP binding ; phosphoprotein phosphatase activity ; protein serine/threonine kinase activity ; glucose metabolic process ; glyoxylate cycle ; phosphorylation ; tricarboxylic acid cycle" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MSERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEILRDPKKRQAYDQFGKAGVGAGAGGFGQGAYTDFSDIFGDFGDIFGDFFGGGRGGFGGGRRSGSQRGSDLRYNLEVSLEDAALGREYKIEIPRLESCGDCNGSGAAKGSSPTTCPDCGGSGQIRRTQGFFSVATTCPTCRGKGTTISNPCKTCGGQGLQEKRRTINIKIPPGVETGSRLKVSGEGEAGPNGGSHGDLYVVTHIKRHELFERQGNDLILVRKITLAQAILGAEIEVPTIDGKKAKMKIPEGTESGQVFRLKGHGMPYLGAYGKGDQHVVVKIEIPKKITRRQRELIEAFARESGENIPGSKGKIFTK", - "output": "cytoplasm ; ATP binding ; heat shock protein binding ; unfolded protein binding ; zinc ion binding ; DNA replication ; protein folding ; response to heat" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MSRISDAFQKRKSLIAYITVGYPDIETTLRLVPLLEENGVDIIELGIPFSDPLADGVTIQNASYQALQNGVTPEVCLSVAALLKEKISIPMVFMGYYNPIYNYGLTKFCQKCATAGVSGFIIPDLPPGEAQDIDFAATEAGLDIIFLLAPTSTDERIKLVAAKSRGFIYLVSHSGVTGATANLPADLSSFVNRVRKTARQPLAVGFGISTPEQAQNIAKFSDGIIVGSRILQLVQTDPSLEKVATFIRQLRQSLD", - "output": "tryptophan synthase activity" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MAYFLDFDERALKEWRKLGSTVREQLKKKLVEVLESPRIEANKLRGMPDCYKIKLRSSGYRLVYQVIDEKVVVFVISVGKRERSEVYSEAVKRIL", - "output": "protein-DNA complex ; toxin-antitoxin complex ; DNA-binding transcription repressor activity ; ribosome binding ; RNA endonuclease activity ; rRNA binding ; toxin sequestering activity ; transcription cis-regulatory region binding ; cellular response to amino acid starvation ; mRNA catabolic process ; negative regulation of translation ; regulation of DNA-templated transcription ; regulation of growth ; response to antibiotic ; single-species biofilm formation" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MILPDRKQILDRELIRRIADTTISGSGHSDGLSEYASIRKAAFAFVESAVLGDQAYSPIENAELAFIVWILAALDENIITARTIIKARDTVEKQLRLVEHYEDLEEFGSRLGIEISVFGEQIGKDHLYRIGVADFATYASRVTGSKYRLSNQIVREGYVYVDEDVMAKVLREAFVSFMFDTLDQIRKEDAIETIKSVLDDLEKIRESYRKAHNVRMIAGKGDASMFPPCMKEIIKNLESGVNVSHMGRLALASFLHKAGYSEDEIVPYFRNAPDFDENITRYQIKHISGEISGTEYTPPKCETMRSNHLCYMDDDPLCHREWMKHPLTYYEVKRRNRKIR", - "output": "primosome complex ; 4 iron, 4 sulfur cluster binding ; DNA primase activity ; metal ion binding" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MKLTNPGPVPVYTVAGPSTARPLPDWLLRRRKRSAKYDPENLNNFELIQEFEFEEASNCVRVSEDGNWIMSTGTYKPQFHVHNTRELSLSFSRHTNSENVTFLLLSQDYSKSVHLQCDRTLEFHTPMGCHYSIRIPRFGRDLAYLRQSCEVLVPAVGLSSDGSGYGEVFRLDLERGQFLRPWQVDVGEDEPGSGLQGSIHAGAVNVAAVAENTHGLCAFGTSIGTVEFYDPRSKSRVAVLGNQDGEITALDYSRDGLSLALGTSTGQIRIFDLRNPRPLLKKDQGMGLPIKNLIHLTTPTEERKLLSADKRIIKIWDEQSGDLWTSVEPLVDLNFVTHVPDSGMILTANEGKQMHCFFIPNLGLAPRWCHFLDNLVHEMESEKRTETYDNYKFLTKPELKSLSLDHLIGKTNLLRPYMHGFFVHAKLYDQARLITNPYIWEEERAKRIKEKIEKERSSRIRGIKKVKVNQKLVEKIAERQEKKGKPDVAAAMLQDPRFGKLFEDEEFAVDETSREFRALNPSTKIPGAQGDQDGDVKMGDFSSEEESSEGSGSEDEREPRRENKKPEKPKEKPKKVEEPKKHEASKPKDEVVMQIRSSKEQGGKLGDTAFGEREQKDTRASRIRTGEVVGEQVLTFIPESKKKKPQPAPETKPRTDRRSASNNALRKL", - "output": "nucleolus ; rRNA processing" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MEIEEIKVQTEVNGAPFIIETGYFAKQANGAVIVRQGDTAVLVAAVMSEEPQADIDFLPLTVEYREKYYAYGKIPGGFVKREGKPTDREILVARNIDRPIRPLFPKGFYNDIVITAYTLSADDKYDPDVLGIVGASAALHISDIPFEGPIAGVRVCRVNGEFIVNPTYQQKAQADIEIVVAGSKDAIVMVEGGAKEVPEEDILEAMMFGHQEIKKLIELQEELRLKCGKEKIQVAIDEEEIILKDKLKEFSYEKIKEAFKITDKKQRNKTINAIFEEAFKTLEIPEEKIKKASFIYKDIVSNVMRDNILNEGIRIDGRKPEEIRPIWIKVGVFPRNHGSAIFTRGQTQAFVTVTLGSLSEGQIEESIEAGEVMKRFMLHYNFPPFSTGEAKPPRATSRREIGHGNLAERALEPLIPPEEEFPYAIRVVSDILESNGSTSMATVCGGSLALFDAGVPMKKHVAGIAMGLIKAEDKFVILSDILGDEDHLGDMDFKVAGTRDGVTSIQMDIKVKGLTKEILEKALQQARDGRNYILDLMYQAIPEPRKEVSPYAPTVTTLRVLPDKIPIIIGPAGKNIKKIIEETKVKIDLDPEGLVKIYATSKEAAEKAVSMINELILDVEVGEVYMGKVTRVEDYGAFVELLPGRLSLLHVSQITGERLKSAKEKIKVGDVLKVKVSEIDDQGRIKVSLKDVPENVEPKNKFLFKEE", - "output": "cytoplasm ; magnesium ion binding ; polyribonucleotide nucleotidyltransferase activity ; RNA binding ; mRNA catabolic process ; RNA processing" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MPRRREVPKREVLPDPKYGNVDVAKFMNMLMLSGKKSVAERIVYGAFEQIQTKGGKDPLEVFTVALNNVKPVVEVKSRRVGGANYQVPVEVRPSRRMALAMRWLREAAKKRSEKSMALRLAGELSEAAEGRGGAMKKRDEVHRMAEANRAFSHFRF", - "output": "small ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; tRNA binding ; translation" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MADQIRSATEGGDPTSDPKGFRRALGTFPTGVTIVTAPGVDGPAGVTANSFASVSLDPPLVLWSIGHTSRSHSKFQQSATFAINILADDQVGVSQVFAGGSADKFSLVDWHTGRTGAPLIDNALAYFDCVCEARHEGGDHTIMIGRVVDFGRAEGSPLAFSQGRYGVTLDHPEAAKARDHKSEEYGLDDLPFLSLIAKAHYKEDADLEEQRSAAGCTPVGSKILAGLYGSAPLTADELARRMYLDRREVVDSLNEFVADGHVESCDSGRFALTESGKQRRRRMIEYVSRYQDEQLASISRSDLGVATRVLQAFLAGPGRGSS", - "output": "FMN binding ; FMN reductase (NADH) activity" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MSGELPPNINIKEPRWDQSTFIGRANHFFTVTDPRNILLTNEQLESARKIVHDYRQGIVPPGLTENELWRAKYIYDSAFHPDTGEKMILIGRMSAQVPMNMTITGCMMTFYRTTPAVLFWQWINQSFNAVVNYTNRSGDAPLTVNELGTAYVSATTGAVATALGLNALTKHVSPLIGRFVPFAAVAAANCINIPLMRQRELKVGIPVTDENGNRLGESANAAKQAITQVVVSRILMAAPGMAIPPFIMNTLEKKAFLKRFPWMSAPIQVGLVGFCLVFATPLCCALFPQKSSMSVTSLEAELQAKIQESHPELRRVYFNKGL", - "output": "mitochondrial inner membrane ; mitochondrion ; L-alanine transmembrane transporter activity ; L-serine transmembrane transporter activity ; monoatomic ion transmembrane transporter activity ; serine transmembrane transporter activity ; erythrocyte differentiation ; iron ion transport ; L-alanine transport ; L-serine transport ; one-carbon metabolic process ; serine import into mitochondrion" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MSDDSSDVKPGPKGPEQPAVEQSPENVPAPTGEVHQVGARHGMFGVRGTGDTSGYGGLNQAIVLPGDAQRPYGGWFDEVADGLAAATREAGLEIAAPRVVIHRGEITFHLRREDLLPVAQVLRDDERLRFEFCAGVSGVHYPDETGRELHAVYHLLSMTHNRRIRLEVAVPDADPHIPSIVPVYPTNDWHERETYDMFGIIFDGHPALTRILMPDDWPGHPQRKDYPLGGVPVEYKGGTVPPPDQRRSYN", - "output": "plasma membrane ; NADH dehydrogenase (ubiquinone) activity ; quinone binding" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MVIGAAARVAIGGCRKLISSHTSLLLVSSQCRQMSMDAQSVSEKLRSSGLLRTQGLIGGKWLDSYDNKTIKVNNPATGEIIADVACMGTKETNDAIASSYEAFTSWSRLTAGERSKVLRRWYDLLIAHKEELGQLITLEQGKPLKEAIGEVAYGASFIEYYAEEAKRVYGDIIPPNLSDRRLLVLKQPVGVVGAITPWNFPLAMITRKVGPALASGCTVVVKPSELTPLTALAAAELALQAGVPPGALNVVMGNAPEIGDALLTSPQVRKITFTGSTAVGKKLMAAAAPTVKKVSLELGGNAPSIVFDDADLDVAVKGTLAAKFRNSGQTCVCANRVLVQDGIYDKFAEAFSEAVQKLEVGDGFRDGTTQGPLINDAAVQKVETFVQDAVSKGAKIIIGGKRHSLGMTFYEPTVIRDVSDNMIMSKEEIFGPVAPLIRFKTEEDAIRIANDTIAGLAAYIFTNSVQRSWRVFEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEYLEIKYVCLGDMNRH", - "output": "chloroplast ; chloroplast stroma ; cytosol ; mitochondrial matrix ; mitochondrion ; copper ion binding ; NAD binding ; succinate-semialdehyde dehydrogenase (NAD+) activity ; adaxial/abaxial axis specification ; cotyledon development ; gamma-aminobutyric acid catabolic process ; glutamate decarboxylation to succinate ; leaf development ; maintenance of shoot apical meristem identity ; reactive oxygen species metabolic process ; response to cold ; response to heat ; response to light stimulus ; response to salt" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MSWLLGYVDPTEPSFVAAVLTIVFNPLFWNVVARWEQRTRKLSRAFGSPYLACYSLGSIILLLNILRSHCFTQAMMSQPKMEGLDSHTIYFLGLALLGWGLVFVLSSFYALGFTGTFLGDYFGILKESRVTTFPFSVLDNPMYWGSTANYLGWALMHASPTGLLLTVLVALVYVVALLFEEPFTAEIYRRKATRLHKRS", - "output": "brush border membrane ; endoplasmic reticulum membrane ; membrane ; mitochondrial membrane ; sarcolemma ; phosphatidyl-N-dimethylethanolamine N-methyltransferase activity ; phosphatidyl-N-methylethanolamine N-methyltransferase activity ; phosphatidylethanolamine binding ; phosphatidylethanolamine N-methyltransferase activity ; S-adenosylmethionine-dependent methyltransferase activity ; blastocyst hatching ; glycerophospholipid metabolic process ; methylation ; negative regulation of cell population proliferation ; phosphatidylcholine biosynthetic process ; positive regulation of cold-induced thermogenesis ; positive regulation of lipoprotein metabolic process ; response to amino acid ; response to ethanol ; response to nutrient ; response to vitamin ; response to xenobiotic stimulus ; S-adenosylhomocysteine metabolic process ; S-adenosylmethionine metabolic process ; sphingomyelin biosynthetic process" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MSLQTNHRPVLVVDFGAQYAQLIARRVREAGIYSEVIPHTATADDVRAKNAAALVLSGGPSSVYAEGAPSLDAEILDLGLPVFGICYGFQAMTHALGGTVANTGKREYGRTDINVAGGVLHEGLEACHKVWMSHGDAVSEAPEGFVVTASSEGAPVAAFENKERKMAGVQYHPEVLHSPHGQAVLTRFLTEIAGLEQNWTAANIAEELIEKVREQIGEDGRAICGLSGGVDSAVAGALVQRAIGDRLTCVFVDHGLLRAGEREQVEKDFVAATGAKLVTVDERQAFLSKLAGVTEPEAKRKAIGAEFIRSFERAVAGVLEEAPEGSTVDFLVQGTLYPDVVESGGGSGTANIKSHHNVGGLPDDVEFKLVEPLRDLFKDEVRAVGRELGLPEEIVGRQPFPGPGLGIRIIGEVTEDRLETLRHADLIARTELTEAGLDGVIWQCPVVLLADVRSVGVQGDGRTYGHPIVLRPVSSEDAMTADWTRLPYEVLEKISTRITNEVPDVNRVVLDVTSKPPGTIEWE", - "output": "ATP binding ; GMP synthase activity ; glutamine metabolic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MYEYIRGQFQGISKDYVVIELNNIGYRIFTSGNTMSNMPKVGDEVLLYLEQIVREDFIGLYGFTTKEELEMFKLLLSINGVGAKAALSLLSISTVNNLKYAIMMGDEKHITRAPGIGKKTAQRIILELKDKLKPDELTSEEEQLIEGINDNSDYSFNINETLSALMALGYTEKEAQKALEKVDKTLSIENMIKESLKLLMR", - "output": "cytoplasm ; Holliday junction helicase complex ; ATP binding ; DNA binding ; four-way junction helicase activity ; DNA recombination ; DNA repair ; SOS response" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MGSIDEVKKESAGETLGRLLKGEIKDEELKKLIKFQFEKRLQWGYKSSHQEQLSFNLDFIKSLKKMEMSGEIETMNKETYELPSEFLEAVFGKTVKQSMCYFKHESATIDEAEEAAHELYCERAQIKDGQTVLDIGCGQGGLVLYIARKYKKCHVTGLTNSKAQVNYLLKQAEKLGLTNVDAILADVTQYESDKTYDRLLMIEAIEHMKNLQLFMKKLSTWMTEESLLFVDHVCHKTFAHFFEAVDEDDWYSGFIFPPGCATILAANSLLYFQDDVSVVDHWVVNGMHMARSVDIWRKALDKNMEAAKEILLPGLGGSHEAVNGVVTHIRTFCMGGYEQFSMNDGDEWMVAQLLFKKK", - "output": "cytoplasm ; (S)-tetrahydroprotoberberine N-methyltransferase activity ; methylation" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MLIFERSRPGRGATAQAPLREATVSGLPERFRRGTRAPLPELSELDVVRHYTRLSQKNFSIDTQFYPLGSCTMKYNPRACNSLAMLPGFLGRHPHAPDTHSQGFLACMFELQEMLRDVTGMKGGVSLTPMAGAQGEFAGVAMIRAYHDARKDTARTEILVPDAAHGTNPATATMCGYTVKEIPTDDSGDVDMEALKAALGPHTAGIMLTNPSTLGVFERRIKEIADLVHQAGGLLYYDGANLNAILGKVRPGDMGFDVIHMNLHKTFSTPHGGGGPGAGAVGVSERLRPFMPIPVVAKEGERYRFMTEKDLPQSIGRLSAFAGNAGVLLRAYVYMRMLGRAGMPRVAEFSTLNANYVMARLREKGFELAFPGRRATHEFIVTLKRLAKDTEVTAMDVAKRLLDFNYHAPTTYFPLLVPECLLIEPTETESKETLDGFVEAMAEILEEARTSPDKVKGAPYTQPNRRFDEVRAARELDVAWRPGAALDEVAEQGRTD", - "output": "glycine dehydrogenase (decarboxylating) activity ; glycine decarboxylation via glycine cleavage system" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MATLTIDEIVDAISGMTVLEVAELVKKLEEKFGVSAAAMVAASPAAGGAAASPAAEEKTEFDVILQDAGANKLNVIKVVRELTGLGLKEAKDLVDGAPKPIKQGVSKEEAENIKKKLEEAGAKVEVK", - "output": "ribonucleoprotein complex ; ribosome ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MSGNTYGKLFTVTTAGESHGPALVAIVDGCPPGLELSARDLQRDLDRRKPGTSRHTTQRQEADEVEILSGVFEGKTTGTPIGLLIRNTDQKSKDYSAIKDLFRPAHADYTYHHKYGVRDYRGGGRSSARETAMRVAAGAIAKKYLAGLGIQVRGYMSQLGPIEIPFRSWDSVEQNAFFSPDPDKVPELEAYMDQLRRDQDSVGAKITVVAEGVPPGLGEPIFDRLDAELAHALMSINAVKGVEIGAGFASIAQRGTEHRDELTPQGFLSNNAGGILGGISSGQPIVAHLALKPTSSITTPGRSIDTAGEPVDMITKGRHDPCVGIRATPIAEAMMAIVLLDQLLRQRGQNADVRVDTPVLPQL", - "output": "chorismate synthase activity ; amino acid biosynthetic process ; aromatic amino acid family biosynthetic process ; chorismate biosynthetic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MGELADPVVIGTITAPHGVRGTVRVRPAGEGRHLREGLSPLVGGRRRRILRARRTPKGFLVDLEGVPDRFRAAELRGEDLLLDRSELDAPEEDEFYVADLVGLEAVDERGGALGEVIETFPTPAHEVLVVRGEGGLLYVPFTREHVPEVDPRAGRAVVRPPEE", - "output": "cytoplasm ; ribosome ; ribosome binding ; ribosomal small subunit biogenesis ; rRNA processing" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MVAAPCARRLARRSHSALLAALTVLLLQTLVVWNFSSLDSGAGERRGGAAVGGGEQPPPAPAPRRERRDLPAEPAAARGGGGGGGGGGGGRGPQARARGGGPGEPRGQQPASRGALPARALDPHPSPLITLETQDGYFSHRPKEKVRTDSNNENSVPKDFENVDNSNFAPRTQKQKHQPELAKKPPSRQKELLKRKLEQQEKGKGHTFPGKGPGEVLPPGDRAAANSSHGKDVSRPPHARKTGGSSPETKYDQPPKCDISGKEAISALSRAKSKHCRQEIGETYCRHKLGLLMPEKVTRFCPLEGKANKNVQWDEDSVEYMPANPVRIAFVLVVHGRASRQLQRMFKAIYHKDHFYYIHVDKRSNYLHRQVLQVSRQYSNVRVTPWRMATIWGGASLLSTYLQSMRDLLEMTDWPWDFFINLSAADYPIRTNDQLVAFLSRYRDMNFLKSHGRDNARFIRKQGLDRLFLECDAHMWRLGDRRIPEGIAVDGGSDWFLLNRRFVEYVTFSTDDLVTKMKQFYSYTLLPAESFFHTVLENSPHCDTMVDNNLRITNWNRKLGCKCQYKHIVDWCGCSPNDFKPQDFHRFQQTARPTFFARKFEAVVNQEIIGQLDYYLYGNYPAGTPGLRSYWENVYDEPDGIHSLSDVTLTLYHSFARLGLRRAETSLHTDGENSCRYYPMGHPASVHLYFLADRFQGFLIKHHATNLAVSKLETLETWVMPKKVFKIASPPSDFGRLQFSEVGTDWDAKERLFRNFGGLLGPMDEPVGMQKWGKGPNVTVTVIWVDPVNVIAATYDILIESTAEFTHYKPPLNLPLRPGVWTVKILHHWVPVAETKFLVAPLTFSNRQPIKPEEALKLHNGPLRNAYMEQSFQSLNPVLSLPINPAQVEQARRNAASTGTALEGWLDSLVGGMWTAMDICATGPTACPVMQTCSQTAWSSFSPDPKSELGAVKPDGRLR", - "output": "extracellular space ; Golgi cis cisterna ; Golgi membrane ; metal ion binding ; protein xylosyltransferase activity ; chondroitin sulfate biosynthetic process ; chondroitin sulfate proteoglycan biosynthetic process ; embryonic skeletal system development ; glycosaminoglycan biosynthetic process ; glycosaminoglycan metabolic process ; heparan sulfate proteoglycan biosynthetic process ; ossification involved in bone maturation ; proteoglycan biosynthetic process" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MSLILAIYGKGGIGKSTTSANLSAAMALKGAKVLQIGCDPKHDSTFPLTGHLQPTVIDVLDSVNFHLEDVSKEDVIRTGFAGVDTLESGGPPAGSGCGGYVVGETVKLLKEFGLYDKYDVIVFDVLGDVVCGGFSAPLNYADYGLIIACNDFDSIFAANRLCLAISQKSQRHKVKLAGIIANRVDYEYGGGTNLLDQFAEKVGTKVIGRVPYHDLIRRSRLAGKTLFEMEGPGKEECTRPFEEMAEYLLAQPQATVPQPYHDRAIFEAIGGWR", - "output": "4 iron, 4 sulfur cluster binding ; ATP binding ; metal ion binding ; oxidoreductase activity, acting on iron-sulfur proteins as donors ; oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor ; light-independent bacteriochlorophyll biosynthetic process ; photosynthesis, dark reaction" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MRIEVVNVSHIFHRGTPLEKKALENVSLVINEGECLLVAGNTGSGKSTLLQIVAGLIEPTSGDVLYDGERKKGYEIRRNIGIAFQYPEDQFFAERVFDEVAFAVKNFYPDRDPVPLVKKAMEFVGLDFDSFKDRVPFFLSGGEKRRVAIASVIVHEPDILILDEPLVGLDREGKTDLLRIVEKWKTLGKTVILISHDIETVINHVDRVVVLEKGKKVFDGTRMEFLEKYDPRFFTSKMLVMRRLVLKGEDPFSMSDDELLERVCNS", - "output": "ATP-binding cassette (ABC) transporter complex ; plasma membrane ; ATP binding ; ATP hydrolysis activity ; ATPase-coupled transmembrane transporter activity ; riboflavin transmembrane transporter activity ; riboflavin transport" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNLIERLLKEWQPDEIIVGLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSASAVIILESYFEQGY", - "output": "cytoplasm ; nuclease activity ; rRNA 5'-end processing" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MWKLLPAAGAAPGEPYRLLAGVEYVVGRKNCGILIENDQSISRNHAVLTVNFPVTSLSQTDEIPTLTIKDNSKYGTFVNEEKMQTGLSCTLKTGDRVTFGVFESKFRVEYEPLVVCSSCLDVSGKTVLNQAILQLGGLTANNWTEECTHLVMSAVKVTIKTICALICGRPIIKPEYFSEFLKAVESKKQPPDIESFYPPIDEPAIGSKSVDLSGRHERKQIFKGKTFVFLNAKQHKKLSSAVAFGGGEARLMAEDDEEEQSFFSAPGTCVVDVGITNTQLIISHSQKKWIHLIMDTLQRNGLRPIPEAEIGLAVIFMTTENYCNPQGQPCTELKTTTPGPSLSQVLSANGKIIPSAPVNMTTYVADTESEPADTCMPLSERPEEVKIPGLEQSSRKLSQETFNIKEAPKPSSKANNVASDTLVRGKTPSYQLSPMKFPVANKNKDWTSQQQQNSIKNYFQPCTRKRERDEDNPELSSCKSSRMELSCSLLEQTQPAGPSLWKSKEHQSQNATLDREADTSSVGGMDIELNRKSPDRKPLPTETLRPRKRKDVDLATEEEVLEELLRSTKPELAVQVKVEKQEADDTIRKKPRMDAERNRPLNGGSEPESNSALQEDEREKKDELQTESWSTKHEIANSDGLQDSSEELPRKLLLTEFRSLVVSNHNSTSRNLCVNECGPLKNFKKFKKATFPGAGKLPHIIGGSDLVGHHARKNTELEEWLKQEMEVQKQQAKEESLADDLFRYNPNVKRR", - "output": "BRCA1-C complex ; chromosomal region ; chromosome, telomeric region ; Golgi apparatus ; Mre11 complex ; nuclear inclusion body ; nucleolus ; nucleus ; PML body ; replication fork ; site of double-strand break ; damaged DNA binding ; DNA-binding transcription factor binding ; blastocyst growth ; DNA damage checkpoint signaling ; DNA double-strand break processing ; DNA duplex unwinding ; DNA strand resection involved in replication fork processing ; double-strand break repair ; double-strand break repair via homologous recombination ; homologous recombination ; in utero embryonic development ; intrinsic apoptotic signaling pathway ; isotype switching ; meiotic cell cycle ; mitotic G2 DNA damage checkpoint signaling ; mitotic G2/M transition checkpoint ; negative regulation of neuron differentiation ; negative regulation of telomere capping ; negative regulation of viral entry into host cell ; neuroblast proliferation ; neuromuscular process controlling balance ; positive regulation of cell population proliferation ; positive regulation of kinase activity ; positive regulation of protein autophosphorylation ; positive regulation of telomere maintenance ; regulation of fibroblast proliferation ; t-circle formation ; telomere maintenance ; telomere maintenance via telomere trimming ; telomeric 3' overhang formation" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MTDYTPQQIVARGARADAEAAADAIDNHPGLEGATYSILEEDEDKGLWRIDAFPTTDEEDAGLLEVLAGYPLKVVRETLADADWLAMALSGLPPVRAGRFFVYGMHDRGRLPASTVNLRIEAGAAFGTGHHGTTVGCLMAYDKLIKARKFKKVLDVGAGTGLLAIAAARTGSRIAVGTDIDRPSVRISKENAKVNRANAKFVHASGLGHRLVTDNAPYDLVFANILARPLISLAQDIKTALVPGGTVILSGLLRTQERMVKAAYVSRGFKVVNRIHRDAWAALVLQRP", - "output": "cytoplasm ; histone methyltransferase activity ; protein methylation" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MLSTVNNNIVIALDAMGGDFAPLSVIHGAGFFLDNLVDPGIKVFFHIYGDKEEVSPLLLKYKKVSNNSEFTHCSDNVLANDKPSFALRHRKDSSMKAAIVAVKEGKAFGVVSSGNTGALMAISRFVLGTLPNIYRPAIASICPTKTKSFALLDLGANVDCNADSLFQFALMGSIFAKIALKIDNPEVALLNIGTEEVKGNDSVRGAFELLKNAPGINFKGYIEASEFLEGNIDVIVADGFVGNVMLKTAEATASTFINLIKQEVFNSWIAKMLVGILLKSKLNKALTRFNPKIRSGAMFLGLNGIIIKSHGNSDAISFAHAIKFAVNAISENLNQKIINGVSHIE", - "output": "cytoplasm ; phosphate:acyl- acyltransferase activity ; fatty acid biosynthetic process ; phospholipid biosynthetic process" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MDFSIKGCDWSKGTANGFLTGKSDCIVLGVFEAQTLSGAALDIDEATKGLVSRVIKAGDIDGKLGKTLFLHEVSGIGASRVLLVGLGRQDAFSQKAYGDAAKAAWRALLGTKVVQVTFTLAQLPVPERASDWGVRAAILALRNETYKFTQMKSKPDAGAPALKRVVFSVDPADDKAAKVAAKQAVALANGMDLTRDLGNLPGNVCTPTYLANTAKKIAKDWGLKVDVLGLKQIQALKMGSFLSVAKGSVEPPQFIVLQYRGAAAKAAPVVLVGKGITFDSGGISLKPGEGMDEMKYDMCGAGSVLGTMRAVAEMGLKVNVVAIVPTCENMPAGNANKPGDIVTSMKGLTIEVLNTDAEGRLILCDALTYAERFKPAAVIDVATLTGACIIALGHHNTGLFSKDDALAGELLDASREAGDPAWRLPLDDEYQDQLKSNFADLANIGGRPAGSVTAACFLSRFAENYPWAHLDIAGTAWKSGAAKGATGRPVPLLAQFLIDRAGA", - "output": "cytoplasm ; manganese ion binding ; metalloaminopeptidase activity ; proteolysis" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MKEKEKIIVAMSGGVDSAVAAGLLMEAGYDVIGVNLRTWEYEAPACDTTKKSCCSPEDIRDARDVGLSLNIPFYVIKMEKVFGERVIDRFISDYKDGRTPNPCVECNTFVKFGALFEQAKKLGIDKIATGHYARVIEVDGRYAIRNAVDMKKNQTYYLYGLSQDNIKNTVFPLGEMDKSEVREIAKRMGLPVAEKPESQEICFIPENDYRSFLKKKGMEFTPGFFKLASGQIIGKHQGKEGFTIGQRKGLGIAWKNPLYVLSIEDDGTVVLGEEEETVSESFVLEEITYQALAPLALGQSMEMKVQIRYRSAPVHCKVTSLGETWKVNFLEDVKSVTPGQSATFYPTNGDYLFAGGIIQKGSITRKIKSNVEVQRESVPI", - "output": "cytoplasm ; ATP binding ; sulfurtransferase activity ; tRNA binding ; tRNA modification" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MLSKELLAALNEQMNQEYFAAHAYMAMAAYCDKESYDGFANFYIEQAKEERFHGKKIYDYINDRGEHAIFDTIKAPKVEFSSILETFKDSLAQERDVTQRFYNLSELARNDKDYATISFLNWFLDEQVEEESTFETHIDYLTRIGDDCNTLYLYEKELAARSFNEQ", - "output": "cytoplasm ; ferric iron binding ; oxidoreductase activity ; intracellular iron ion homeostasis ; iron ion transport" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MDVTAEAKQIMVQALGKMYSSRSQRGGLRLHRSLLLTLVMKSARDIYHSARLMSEKSGQSVTEECTSHTQEPMDTSSSTATPLRETSGQSSEDGQRSGLEGHPHPLNPAADKENCGPSRPDRHSRKRRSKTATDSDFIPCKKAKLECAEVRGVLQNSSANCGRALDSLSLVPMPRTIVTF", - "output": "cytoplasm ; nucleus ; cilium assembly ; convergent extension ; determination of left/right symmetry ; Kupffer's vesicle development" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MNRDTSPDLHYLSGFGNEFASEALPGALPVGQNSPQKAPYGLYAELLSGTAFTMARSELRRTWLYRIRPSALHPRFERLARQPLGGPLGGINPNRLRWSPQPIPAEPTDFIEGWLPMAANAAAEKPAGVSIYIYCANRSMERVFFNADGELLLVPEQGRLRIATELGVMEVEPLEIAVIPRGMKFRVELLDGQARGYIAENHGAPLRLPDLGPIGSNGLANPRDFLTPVAHYEEAEGPVQLVQKFLGEHWACELQHSPLDVVAWHGSNVPYKYDLRRFNTIGTVSFDHPDPSIFTVLTSPTSVHGMANMDFVIFPPRWMVAENTFRPPWFHRNLMNEFMGLINGAYDAKAEGFLPGGASLHGVMSAHGPDAETCEKAIAADLAPHKIDNTMAFMFETSQVLRPSLQALECPQLQADYDSCWATLPSTFNPNRR", - "output": "homogentisate 1,2-dioxygenase activity ; iron ion binding ; L-phenylalanine catabolic process ; tyrosine catabolic process" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MSTSTTFQIHYFASASTYTGKQTERLPAPLPLPQLFDTLESMYPGIKEKVLTSCGVSLGDEYVDVEADIQVMIHPGDEVAVIPPVSSG", - "output": "cytosol ; molybdopterin synthase complex ; molybdopterin synthase activity ; nucleotide binding ; Mo-molybdopterin cofactor biosynthetic process" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MSYSGERDNLAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGISIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMAHHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN", - "output": "cytoplasm ; ATP-dependent peptidase activity ; serine-type endopeptidase activity ; proteolysis" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MGVLKRRVSSSRGLGGVLREQRAKLYIIKRCVVMLLCWQD", - "output": "plasma membrane ; negative regulation of cell population proliferation ; shoot system development" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MAETKIVVGPQPFSVGEEYPWLAERDEDGAVVTFTGKVRNHNLGDSVNALTLEHYPGMTEKALAEIVDEARNRWPLGRVTVIHRIGELWPGDEIVFVGVTSAHRSSAFEAGQFIMDYLKTRAPFWKREATPEGDRWVEARESDQQAAKRW", - "output": "cytosol ; MPT synthase complex ; molybdopterin synthase activity ; Mo-molybdopterin cofactor biosynthetic process" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MATNIRKTHPLLKIINHALVDLPAPSNISAWWNFGSLLVLCLAVQILTGLFLAMHYTADISLAFSSVIHICRDVNYGWLIRNIHANGASLFFICIYLHIARGLYYGSYLLKETWNIGVILLFLLMATAFVGYVLPWGQMSFWGATVITNLLSAFPYIGDTLVQWIWGGFSIDNATLTRFFAFHFLLPFLIIALTMLHFLFLHETGSNNPLGLNSDMDKIPFHPYFTYKDILGFFTMTLFLGALVLFLPNLLGDAENFIPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILMLLLVPFLHTSKQRTNTFRPLTQLLFWTLVANTIILTWIGGQPVEQPFIFIGQIASITYFSLFLIITPFISWCENKILSLN", - "output": "mitochondrial inner membrane ; respiratory chain complex III ; metal ion binding ; ubiquinol-cytochrome-c reductase activity ; respiratory electron transport chain" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MSGFGGRGVDEKGFLRWLLGELGVEEDDVAYVDGLVVKVDGAAASTSRLPFQTWADFGWRNVAAAYSDVRVKFAEARLLLASVTAPDLGTAAEVVQGVREASQFFSLAYVGGDLNEGRDVVVDVVLVGWARARVGRAPRPGDVLVTIPQFGYTSLAYRFWQMGGAVVERGVEALKRPKPLWPLPPAECVTAAMDSSDGLGDVLWSMARGVDIVVKELPAPREVLEFAAERGLDVGEIVFNGGEEFLPVFAVRRDCPVESPYVSFAEVVPGEGRVWWRGEELKWRGWAYFRGWG", - "output": "ATP binding ; magnesium ion binding ; protein homodimerization activity ; thiamine-phosphate kinase activity ; phosphorylation ; thiamine biosynthetic process ; thiamine diphosphate biosynthetic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MVFEKVKDIIADQLGIDATEIKMESSFIDDLGADSLDIVELIMALEEEFDIEMPDEEAEKVSSVGDVVNYIKAHTEE", - "output": "cytoplasm ; acyl carrier activity" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MKNSHIYILYGSETGTAEGLAESLFRSLTRMGYDVLVNSMDDFNLENLLRPLQCVFICSTTGQGEMPLNMRKFWRFLLRKKLPNTFLNDMQYAVFGCGDTSYTRFNWASKKLDSRLRQLGAQSFSSRGEGDEQHPDGVEGVFAYWCNHLYSQLAAIKTPSRPAFGEFDLLPPSFQIIIDESLGCKVKGFEDNNIVRHSRGKIEATLVHNKRISNIKHWQDVRHLAFKIPNFERWKPGDVAVLYPWNDDMSVNSFIECMGWESIKYSPLIISSNVAERKLPWFPNILNVFNLVKYVLSIHSVPSRTFFEMASHFSNNKMHKERLQEFSSYKNIDDYYDYTTRPRRTVLETLQEFKSVQIPIEYALDAFPVIRGRQYSIANRCDNSTGILELAVALVKYQTILKSPRQGICSRWICDLHENTSFNIDILPGFLNLSYQSNKPLIMVGPGTGVAPLRALIQERIYNGLKENLLFFGCRNKSMDFLFEKDWEKYTEEGTLKLFCAFSRDQEKKKYVQHSIQENGELVYNLLNEKDGMFFVSGSSGKMPSSVKDAIAGIVSKYSGCSISDGYSFVTSLEKKNRYYQETW", - "output": "cytosol ; mitochondrion ; flavin adenine dinucleotide binding ; FMN binding ; NADP binding ; NADPH-hemoprotein reductase activity ; oxidoreductase activity ; cluster assembly" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MAEIKAAQVMQLRKKSGAGIMDAKKALVASDGDMDKAMDYLREKGIAKAAKKSDRVAAEGLADIAVNGNTAAIVELNSETDFVAASEPFKDLLKKVTKLISENKPANVEEALEIKTENGTLNDDIISTTQKTGEKVSLRRFTVVEKDDGDSFGAYLHQGGQIAALVVLEGADDATAKDVAMHVAAINPEFMTRDDVSQERLDHERAIFKEETLNEGKPEKIVDKIVEGRLNKFLSQICLADQDFVKDSDQTVEQYVSSKNGKLKSFIRYEVGEGIEKKQDDFAQEVKDQMN", - "output": "cytoplasm ; translation elongation factor activity" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MEGAELIIQEINREAEQKIQYILSEAQKEAEKIREEARKRAQARAEWILRKAQTQAEIEKQRIIANAKLEIRKKRLEVQEALIQEVITALRERLAELPEEEYFPMLVDLTGKAVEELGSGSVVVKSNERTLKLLEGRLDEFKKALTEKLGRDVEVTLGEPITTIGGILVETPDRTVRVDNTFESRIERFEGELRAAIAKALFG", - "output": "proton-transporting two-sector ATPase complex, catalytic domain ; ATP binding ; proton-transporting ATP synthase activity, rotational mechanism ; proton-transporting ATPase activity, rotational mechanism ; proton motive force-driven plasma membrane ATP synthesis" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MNRLAVEIPGLSLKNPIMPASGCFGFGQEYSKYYDLNELGAIMAKAVTPEPRLGNPTPRVAETASGMLNAIGLQNPGLEHVLAHELPFLEQFETPIIANVAGATEDDYVQVCARIGESKAVKAIELNISCPNVKHGGIAFGTDPDVAHRLTKAVKNVATVPVYVKLSPNVADIVSIAQAIEAAGADGLTMINTLLGMRIDLKTRKPIIANGTGGLSGPAIKPVAIRMIHQVREVSNIPIIGMGGVQTVDDVLEFLIAGADAVAVGTMNFTDPFICPKLISELPKRMDELGISSLQELKKERTNQ", - "output": "cytoplasm ; dihydroorotate dehydrogenase (NADH) activity ; 'de novo' pyrimidine nucleobase biosynthetic process ; 'de novo' UMP biosynthetic process" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MRLDILLFTLSSSTSLALSYSLPMDPAHSSVHTLSAADRHIGERVTRQRHLREEPANEARNYSDLAVEIKRLVEELDSRVLEQADISLLDRHYAGDYKAFRSDLMTYGYQTRFAEQYKLFKKLGIDFKHNY", - "output": "extracellular region ; host cell" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MRDYSKEIKSWAAELGFDFCGISAADFLEEEAPRLERWLNRNYHGKMAYMANHFDKRLDPRKLVDGAKSVVSLLLNYYPEEPLDASPYKISKYAYGKDYHYVIKDKLKLLFERIQKEIGEVGGRIFVDSAPVMDKIWAKKAGLGWVGKNSNLINRKMGSFFFIAELILDLPLQADGPIRDYCGTCTACIDACPTDAITPYEVDGSKCISYLTIELKDQIPNEFKGKMENWIFGCDICQDVCPWNSFARPHSTEEFYPNENLKTFQDWDEITSEIFSHLFKKSAVERTKLEGLKRNIAFVKEV", - "output": "cytoplasm ; 4 iron, 4 sulfur cluster binding ; epoxyqueuosine reductase activity ; metal ion binding ; queuosine biosynthetic process ; tRNA processing" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "NLFQFGEMIFEKTGKEAVHSYAIYGCYCGWGGQGRAMDATDRCCFVHDCCYGRVNGCNPKMATYSTSFQNGDIVCGDNDLCLRAVCECDRAAAICLGQNVNTYNKNYEHYSISHCMEESEQC", - "output": "extracellular region ; calcium ion binding ; phospholipase A2 activity ; toxin activity ; arachidonic acid secretion ; lipid catabolic process ; phospholipid metabolic process" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MSVVNRRIAVYPGTFDPITNGHIDLVSRAAPLFESIVVGVAQSPSKGPSLPLQQRVALAREALCQHENVQVIGFDTLLAHFVRHVGAGVLLRGLRAVSDFEYEFQMASMNRHLIPEVETLFLTPAEQHSFISSSLVREIARLGGDVSGFAPAAVVAALRQNL", - "output": "cytoplasm ; ATP binding ; pantetheine-phosphate adenylyltransferase activity ; coenzyme A biosynthetic process" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MNPITYELIKTDKQTGARLGRVHTPHGSFDTPTFMPVGTLATVKTMSPEDLQSMQANIILSNTYHLWLRPGEDIIREAGGLHKFMNWDGAILTDSGGFQVFSLSDMREIKEEGVHFRNHLNGEKLFLSPEKAMDIQNALGSDIMMAFDECPPYPAEYDYMKASVERTSRWAERCLQAHNRPHDQGLFGIVQGGEYEALRKQSAEDLVSLDFPGYAIGGLSVGEPKHVMNKVLEFTTPFLPSNKPRYLMGVGSPDALIDGAIRGVDMFDCVLPTRIARNGTCMTSNGRLVVRNAKYARDFNPIDEHCSCHVCKNYSRAYIRHLIKCNETFGFRLTTYHNLHFLLKLMEQVRTAIKEDRLGDFKESFFEQYGLNKANPKNF", - "output": "metal ion binding ; queuine tRNA-ribosyltransferase activity ; queuosine biosynthetic process ; tRNA-guanine transglycosylation" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MEYRSLTLDDFLSRFQLLRPQINRETLNHRQAAVLIPIVRRPQPGLLLTQRSIHLRKHAGQVAFPGGAVDDTDASVIAAALREAEEEVAIPPSAVEVIGVLPPVDSVTGYQVTPVVGIIPPDLPYRASEDEVSAVFEMPLAQALHLGRYHPLDIYRRGDSHRVWLSWYEQYFVWGMTAGIIRELALQIGVKP", - "output": "CoA pyrophosphatase activity ; magnesium ion binding ; manganese ion binding ; nucleoside diphosphate metabolic process" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "PTMPVDSRIIEDAIRNHSESASPSASSGSPNNMSPTGWSQPKTPVPAQRERAPGTNTQEKNKIRPRGQRDSSYYWEIEASEVLLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHGGLTVKIGDFGLATVKSRWSGSQQVEQPTGSILWMAPEVIRMQDSNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCLKKVREERPLFPQILSSIALLQHSLPKINRSASEPSLHRASHTEDINSCTLTSTRLPVF", - "output": "ATP binding ; protein serine kinase activity ; protein serine/threonine kinase activity ; protein phosphorylation" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MARKSLIQREKKRQVLEQKYHSIRQSLEREISEVSSLDDKWEIHRKLQSSPRNSTPTRLHRRCFLTGRSRANYRDFGLSGHVLREMTHACLLPGMKKSSW", - "output": "chloroplast ; ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "PMGMTQPLSHSNQMPSPNAMGPNIPPHGVPMGPGLMSHNPIMGHGSQEPPMVPQGRMGFPQGFPPVQSPPQQVPFPHNGPSGGQGNFPGGMGFPGEGPLGRPSNLPQSSADAALCKPGGPGGPDSFAVLG", - "output": "nucleus ; beta-catenin binding ; transcription coactivator activity ; canonical Wnt signaling pathway" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MQQGWLSNWLVKHDVVHRSLGFDHRGVETLQIKAGDWDSIAVILYVYGYNYLRSQCAYDVAPGGSLASVYHLTRIQYGIDNPEEVCIKVFAQKDNPRIPSVFWVWRSADFQERESYDMVGISYDNHPRLKRILMPESWIGWPLRKDYITPNFYEIQDAH", - "output": "chloroplast thylakoid membrane ; NADH dehydrogenase (ubiquinone) activity ; quinone binding ; photosynthesis, light reaction" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MSMSIMDFINDLKKKNITLYHNKGKIKIIGPQELLTADLKQQIKRYKEDIIAALEAGETDIERSFPKAAPSKSGTYPLSREQKRMFILNQLDDSKTAYNMPLAVKINGEVQISRLEQAWKALIKRHESLRTSFVMLDGEPVQKIEQEAEFRLEYSELGDQSIQEKISRFIKPFELEKAPLLRAEIVKVDEAEHMMMVDMHHIISDGVSIGILMKEFADCCEGKELSPLAVQYKDYSEWQRDIEQQSRLKKQEAYWLNTFRGDIPVLNMPLDFPRPKIRSFQGNRTVVELDQDTTKKLKTIAAKNGVTMYMLLLAGYTILLSKYTGQEDIIVGSPIAGRPHADLNGTIGMFVGTLALRNRPKGNMTFSEYVQTVKNNTLKAYENQDYQFDALIEHLGLTHDMSRNPLFDTMFDLQHADDFASEAGGGHFETYDIPFHVAKFDVSLTAFLHGDNLKFDFQYCTDLYKKETVERMAGHFLNVLKDAAHHPELALSEIRMMSEEEKDIILHTFNHEKTDGPKNKTLSRLFEERAEKTPDHTAVIFEDQQLTYRELNEKANQLAWLLREKGVKPDTIVAIMTDRSLEMIIGIIGILKAGGAYLPIDPDYPEDRVKYMLEDSGADMVVIQEPFKSKIDGRQLITAEDTRSFSKENLPNVNKASDLAYVIYTSGSSGRPKGVMTTHRNVVHYVDAFTKRIPLSEHDTVLQVVSFSFDAFSEEVYPILACSGRLVISRKVSDLNIDELVKTIGKYRVTLVSCSPLLLNEIDKNQHLTFHPQMKFISGGDVLKFEYVENIIKGADVYNSYGPTEATVCATYYQLSSADRKKTSIPIGKPLSNYKVYIADQYGRPQPVGVPGELLIGGEGVARGYLNHETLTKAAFVVDESGERVYRTGDLARWLSDGNIEFLGRIDSQVKIRGYRIELEEIEHRLLMNDNINEAIVVAKEDQENSKYLCAYIAFNNKNADIEQVQERLAKDLPEYMIPSCFIKLDQIPRTINGKADLKALPEPDRRAFAQARYEAPRNQTEALLLSIWQDILPAEQIGINDHFFDIGGHSLKAFSMAAKIQSALKVEVTLKEIFNHSTIQDLAAYIAQKQKQVQSDIQKAEKKEYYPLSSAQKRLYILNQIEEGQTAYNMPFAMKIKGELQTDKAEKAFRTLIKRHESSRTSFVTINGEPVQNINEEVTFEMKYRELDNCSLRERMNQFIRPFELEKAPLLRAELVRVNAAEHILLLDMHHIISDGVSIGILMKEWAALYEEKELAPLKIQYKDYSEWQRDPWQKDRLKKQEESWLSVFQNDIPVLNMPTDFPRPQMQSYEGDRIAFAIERELTDKLKKTAKENGVTMYMLLLAGYTILLSKYTGQEDIIVGSPIAGRTREELEQTVGMFVGTLAMRNHPKGGRTFIEYLQDVKENTFNAYENQDYPFDELVDKLDLERDISRNALFDTMFDMQALDDAEPDIEGLHVEPVDLEFQISKFDLSLTAAESAGVITFHLEFCTRLYKKETAETLAQHFVNILRDISDHPQKTLNDISMLSEEERHTVLYQFNDTNTEHPSGIFSELFEEQAEKSPNHPAAVFKDQMLTYRELNEKANQLARTLRQKGVQRESVVGIMAERSLEMLTGILAVLKAGGAYMPIDPGLPKERIQYLITDSGADLLLTQHQLIGSISFAGEIIQIDQADAYDTDGSNLEHLNSPGDLAYVIYTSGTTGNPKGVMVEHRNIIHAHYTWRKHYELASFSVNLLQLASMSFDVFAGDLCRSLLNGGTMYIVPDDVKLEMNLLYDMINKYGIHMLESTPSLIIPLMKYIDHHKLDFSSMKLLIMGSDTCTIKDYKWLVERFGQRMRIINSYGVTEASVDSGYYEEALDRIPEIANTPIGKPLDNTAFYILDPSLNPQPVGVYGELYIGGEGIARGYLNKPELTKERFVPNRFAAGGNMYKTGDLARWLPDGNVEFLGRIDHQVKIRGFRIETGEIETKLLENQNISEAVVIDREDKKGHKYLCAYIVARAKTNTNELREYLSDHLPDYMLPSYFIQINKMPLTPNGKIDRKALPEPAGDVIAASGYEAPRNETEEKLAAVWQEVLDRDKIGINDNFFEIGGDSIKALQIVSKLSRADLKLQVKDLFTNPFIRHLSKYVKKETKARTSEIVQGQVPLTPVQRSFFEANQREQNHYNQAFMLYRENGFAERIVEKVFRKLTEHHDALRMVYWEKNGDIIQHNRGLEDSVFDLYVYDLKTEKNLEKTVYQIATNIQKDISISEGKMIKLCVFKTTEGDHLLIAIHHLLVDGVSWRILFEDFEAAYGQALQGKPIELGYKTDSYKTFSEKLAEYANSKKLLKEQEYWREISKGKMAFLPKHRQAAHDNYENSRTLRISLSQTETEQLLKEAHKAYNTQINDLLLTALLIASRQLTGENRLKILMEGHGRDDILQDVDITRTVGWFTAMYPVFIDLEDEADLSVMIKIVKETLRKIPNNGIGYGILKYLRKDEGLLKDEKPPILFNYLGELDHDLTTEQFSSSKLSAGQSIGEKSARDASVEIDSVVAGRQLMISTTFNEYEYSPDTISELNQAFKESLQMVISHCTGKHETEKTSSDYGYDKLSLEDLEELLNEYESVDS", - "output": "ligase activity ; ornithine racemase activity ; antibiotic biosynthetic process ; organic substance biosynthetic process" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MSEFLPFSRPAMGVEELAAVKEVLESGWITTGPKNQALEQAFCQLTGNQHAIAVSSATAGMHITLMALKIGKGDEVITPSLTWVSTLNMISLLGATPVMVDVDRDTLMVTPEAIESAITPRTKAIIPVHYAGAPADIDAIRAIGERYGIAVIEDAAHAVGTYYKGRHIGAKGTAIFSFHAIKNITCAEGGLIVTDNENLARQLRMLKFHGLGVDAYDRQTWGRAPQAEVLTPGYKYNLTDINAAIALTQLVKLEHLNTRRREIAQQYQQALAALPFQPLSLPAWPHVHAWHLFIIRVDEQRCGISRDALMEALKERGIGTGLHFRAAHTQKYYRERFPTLSLPNTEWNSERICSLPLFPDMTTADADHVITALQQLAGQ", - "output": "UDP-4-amino-4-deoxy-L-arabinose aminotransferase ; lipid A biosynthetic process ; lipopolysaccharide biosynthetic process ; response to antibiotic" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MSGDGSCSYSAEEGIRELLQSAKAKFRESVDVAIKLSVADSKSGESIRGAVVLPKGLGREVRVAVFAKGEHAKQASSAGADVVGDEELIEEIKKGRRLDVDWCIATPDFMPQISAIAKILGPRGLMPNPKFGTVTLELAEMVGIIKSGQVKFKSDRYGIVHVKIGDIGFTPEDLLENFNAVVAAVQGLRPTTIKGSYVRGVFVNSTMGRSFRIAGTG", - "output": "large ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; tRNA binding ; regulation of translation ; translation" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MKKIECIIMDWAGTAVDYGCFAPVAAFIKAFAGKGLTIDVEQTRKPMGLPKIQHIRELLTMPEVNEQFINRYRRAWTEEDVVELNHLFEKYLFASLKEYTDPIPGVIPTLEKLRAEGLKIGSTTGYTREMMDVVLPEAQAKGYRVDYCATPNLLPAGRPAPYMIFENLTKLAVPDPDTVVKVGDTIADIQEGVHAKVWSVGVVLGSNEMALTEEETHALPAAELENRIAEVKQRMLAAGASYVIRSIEELPALIQLINSKLNH", - "output": "magnesium ion binding ; phosphonoacetaldehyde hydrolase activity ; organic phosphonate catabolic process" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MPEVKRLSDGIFEVIKDKKQLATKNLDPGKTVYGEKLIAVEGVEYRTWDPRRSKLGAMVLKKFNIPLTKNSKVLYLGAASGTTVSHVSDIVSEGAVYAVEFAPRSMRDLIGLASRRKNIHPILADAGKPDSYSHLVEPVDLIFQDVAQPNQAEIAARNAVRFLKREGYLLLSIKARSIDTVAKPKEVFKAEVKKLEQAFEPRFEILNAKDLMPYHEDHLGVLAKLK", - "output": "methyltransferase activity ; RNA binding ; methylation ; rRNA processing ; tRNA processing" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MPIATINPATGETVKTFTAATDDEVDAAIARAHRRFADYRQTSFAQRARWANATADLLEAEADQAAAMMTLEMGKTLAAAKAEALKCAKGFRYYAENAEALLADEPADAAKVGASAAYGRYQPLGVILAVMPWNFPLWQAVRFAAPALMAGNVGLLKHASNVPQCALYLADVIARGGFPDGCFQTLLVSSGAVEAILRDPRVAAATLTGSEPAGQSVGAIAGNEIKPTVLELGGSDPFIVMPSADLDAAVSTAVTGRVQNNGQSCIAAKRFIVHADIYDDFVDKFVARMAALRVGDPTDPDTDVGPLATEQGRNEVAKQVEDAAAAGAVIRCGGKRLDRPGWFYPPTVITDISKDMALYTEEVFGPVASVFRAANIDEAVEIANATTFGLGSNAWTRDETEQRRFIDDIVAGQVFINGMTVSYPELPFGGVKRSGYGRELSAHGIREFCNIKTVWIA", - "output": "plasma membrane ; aldehyde dehydrogenase activity ; succinate-semialdehyde dehydrogenase (NAD+) activity ; succinate-semialdehyde dehydrogenase (NADP+) activity ; succinate-semialdehyde dehydrogenase activity ; tricarboxylic acid cycle" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MIQGTTSDAGKSTLVAGLCRLARRTGARVAPFKPQNMALNSAVTANGGEIGRAQALQALAAGIEAHTDLNPVLLKPTGDRGAQVIIHGKARANLDARAYHDYKPTAMRAVLESYGRLRGAYDAVIVEGAGSPAEINLREGDIANMGFAEAVDCPVVLVADIDRGGVFAHLVGTLACLSDSERARVRGFVINRFRGDPALLEPGLRWLEARTGKPVLGVLPYLHGLTLDAEDMLPASARTSAARRDAGVLRIVVPALPRISNHTDFDALRAHPRVDFTYWRRGPVPDADLLILPGSKNVLADLAWLRDAGWDALIKRHLRYGGKVIGICGGMQMLGRTLADPHGVEGAAGATSAGLGLLDYATTLTPEKTLVNAAGRLAFGGDARVAGYEIHMGRTEGPALASPALMLAGRGGERPDGALSADGQILATYLHGLFDTPHACAALLEWAGLDGAEALDYPALREASLERLADTFAEHLDLDRVFAAFA", - "output": "ABC-type vitamin B12 transporter activity ; catalytic activity ; cobalamin biosynthetic process ; glutamine metabolic process" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MSKRDYYEVLGVARTANDEELKKAYRRCAMKFHPDRNPGDAAAEASFKECKEAYEVLSDGNKRRMYDSHGHAAFEHGMGGGGGPGGPDMNDIFGDIFGNIFGGAGGGGPRQARRGADIGYVMELDLEEAVRGVERRIEIPTLAECGDCDGSGSEDGKVETCNVCHGRGQVRIQRGIFAMQQACHNCGGRGQIIAKPCKTCHGNGRVEEDKVLSVKVPAGVDTGDRIRLSGEGEAGPAGTPPGDLYVEVRVREHAIFQRDGDDLHCEVPIRISQAALGDTVRVATLGGEAEIRIPAETQTGKLFRLRGKGVRSVRSRSEGDLYCRVVVETPVNLTNDQRKLLEQFEATFNGEDARKHSPKSATFIDGVKGFWDRMTS", - "output": "cytoplasm ; ATP binding ; heat shock protein binding ; unfolded protein binding ; zinc ion binding ; DNA replication ; protein folding ; response to heat" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MTIRYPNGKRYNQASQPHKTPIKKHTYSNRGMSLEEELNETNEYYLTHNIACVHKKPTPLQIVKVDYPARSAAVVKEAYFKQPSTTDYNGVYKGKYIDFEAKETKNKTSFPLQNFHLHQIEHMKQVIAHNGIAFVIIKFTLFDELYLLDAKHIITFWNRQNTGGRKSITKEEIVEHGSLLSCGYHPRIDYIRVLDTVYFS", - "output": "cytoplasm ; endonuclease activity ; magnesium ion binding ; nucleic acid binding ; chromosome segregation ; DNA recombination ; DNA repair" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MVPPPSNPQQVQQFLSSALSQRGPSSVPYEESNKWLIRQHLLNLISSYPSLEPKTASFMHNDGRSVNLLQADGTIPMPFHGVTYNIPVIIWLLESYPRHPPCVYVNPTADMIIKRPHAHVTPSGLVSLPYLQNWVYPSSNLVDLVSDLSAAFARDPPLYSRRRPQPPPPSPPTVYDSSLSRPPSADQSLPRPFPPSPYGGGVSRVQVQHVHHQQQSDDAAEVFKRNAINKMVEMVHSDLVSMRRAREAEAEELLSLQAGLKRREDELNIGLKEMVEEKETLEQQLQIISMNTDILDSWVRENQGKTKNLVDLDVDNAFECGDTLSKQMLECTALDLAIEDAIYSLDKSFQDGVVPFDQYLRNVRLLSREQFFHRATGSKVRAAQMEVQVAAIAGRLHS", - "output": "early endosome ; ESCRT I complex ; late endosome ; protein-containing complex ; ubiquitin binding ; cell division ; endosome to lysosome transport ; protein modification process ; protein transport ; trichome branching" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MNQTLLSDFGTPVERVERAIDALRNGRGVMVLDDESRENEGDMVFAAEAMTVEQMALTIRHGSGIVCLCITDERRQQLDLPMMVANNSSQFQTAFTVTIEAAKGVTTGVSAADRLTTIRAAIADNAKPTDLNRPGHVFPLRGQPGGVLSRRGHTEASIDLATLAGYKPAGVLCELTNDDGSMAHAPEVIEFAKLHDMPVVTIDDLAEYRQSQEKKAS", - "output": "3,4-dihydroxy-2-butanone-4-phosphate synthase activity ; magnesium ion binding ; manganese ion binding ; riboflavin biosynthetic process" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MAENVTSAKATAFQVRIAPRKARLVLDTVRGKSVNEAYAILKFLPNTGTEPVYKVLNSAVANAENNFALDRADLVIKEAYANEGPTMKRFRPRAKGTASKINKRTSHITIVVSENDKKGA", - "output": "large ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MAKPEFHIFICAQNRPAGHPRGSCGAKGAEGVYNAFAQVLIQKNLTNRIALTTTGCLGPCQAGANVLIYPGAVMYSWVEPADAAIIVEQHLLGGEPYADKLTPAEIW", - "output": "2 iron, 2 sulfur cluster binding ; metal ion binding ; nitrogen fixation" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MIQPQTYLNVADNSGARKLMCIRVLGGGNRRYGFIGDKIIAVVKDATPNMAVKKSDVVEAVIVRTRKAVSRDSGMSIRFDDNAAVIINKDGNPRGTRVFGPVARELRDKNFTKIVSLAPEVL", - "output": "large ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MLRILLSNDDGITAPGIQTLAAALREFAQVQIVAPDRNRSGSSNALTLDSALRITTLSNGDIAVQQGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLNGQQHYATAAAVTCRILRALQHKPLRTGKILNINIPDLPLSEIKGIRVTRCGSRHPAEQVFCQQDPRGQDLYWIGPPGEKFDVAEDTDFAAVEQGYVSITPLQVDLTAYGAQDVVENWLASMAD", - "output": "cytoplasm ; 3'-nucleotidase activity ; exopolyphosphatase activity ; metal ion binding ; nucleotide binding ; XMP 5'-nucleosidase activity" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MPFRVEVLNETSGGARLTPERATELCRRAFVERGLDPERMGELSVALVEPEVIHDLNLKFRNKDAPTDVLSFEVDGPYGEMVGEIVICPGCAEMDLEELVVHGALHLSGMDHGENFEASEMARVQKRVMEAVRGR", - "output": "cytoplasm ; metalloendopeptidase activity ; RNA endonuclease activity ; zinc ion binding ; rRNA processing" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MANTASAEKRNRQAQKRRARNVQVRTGVKSAVKKLREAIAKGDPAATQVALKSAEKTIGKAASKGVLHKNAASRKISRLAKAAAKPAAAAK", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MNCISDFFTYETTKSVVVKSWTIGIINRVVQLLIISYFVGWVFLHEKAYQVRDTAIESSVVTKVKGSGLYANRVMDVSDYVTPPQGTSVFVIITKMIVTENQMQGFCPESEEKYRCVSDSQCGPERLPGGGILTGRCVNYSSVLRTCEIQGWCPTEVDTVETPIMMEAENFTIFIKNSIRFPLFNFEKGNLLPNLTARDMKTCRFHPDKDPFCPILRVGDVVKFAGQDFAKLARTGGVLGIKIGWVCDLDKAWDQCIPKYSFTRLDSVSEKSSVSPGYNFRFAKYYKMENGSEYRTLLKAFGIRFDVLVYGNAGKFNIIPTIISSVAAFTSVGVGTVLCDIILLNFLKGADQYKAKKFEEVNETTLKIAALTNPVYPSDQTTAEKQSTDSGAFSIGH", - "output": "dendritic spine ; Golgi apparatus ; hippocampal mossy fiber to CA3 synapse ; membrane raft ; neuronal cell body ; plasma membrane ; presynaptic membrane ; receptor complex ; rough endoplasmic reticulum ; Schaffer collateral - CA1 synapse ; terminal bouton ; ATP binding ; extracellularly ATP-gated monoatomic cation channel activity ; identical protein binding ; purinergic nucleotide receptor activity ; behavioral response to formalin induced pain ; cellular response to ATP ; establishment of localization in cell ; inorganic cation transmembrane transport ; neuromuscular synaptic transmission ; neuronal action potential ; peristalsis ; positive regulation of calcium ion transport into cytosol ; positive regulation of calcium-mediated signaling ; positive regulation of sensory perception of pain ; protein homotrimerization ; regulation of synaptic plasticity ; response to carbohydrate ; response to cold ; response to heat ; response to hypoxia ; response to mechanical stimulus ; sensory perception of taste ; signal transduction ; urinary bladder smooth muscle contraction" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MEPRAVAEAVETGEEDVIMEALRSYNQEHSQSFTFDDAQQEDRKRLAELLVSVLEQGLPPSHRVIWLQSVRILSRDRNCLDPFTSRQSLQALACYADISVSEGSVPESADMDVVLESLKCLCNLVLSSPVAQMLAAEARLVVKLTERVGLYRERSFPHDVQFFDLRLLFLLTALRTDVRQQLFQELKGVRLLTDTLELTLGVTPEGNPPPTLLPSQETERAMEILKVLFNITLDSIKGEVDEEDAALYRHLGTLLRHCVMIATAGDRTEEFHGHAVNLLGNLPLKCLDVLLTLEPHGDSTEFMGVNMDVIRALLIFLEKRLHKTHRLKESVAPVLSVLTECARMHRPARKFLKAQVLPPLRDVRTRPEVGEMLRNKLVRLMTHLDTDVKRVAAEFLFVLCSESVPRFIKYTGYGNAAGLLAARGLMAGGRPEGQYSEDEDTDTDEYKEAKASINPVTGRVEEKPPNPMEGMTEEQKEHEAMKLVTMFDKLSRNRVIQPMGMSPRGHLTSLQDAMCETMEQQLSSDPDSDPD", - "output": "cytoplasm ; plasma membrane ; G-protein alpha-subunit binding ; guanyl-nucleotide exchange factor activity ; adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway ; basement membrane organization ; cell migration involved in gastrulation ; cell-cell adhesion involved in gastrulation ; G protein-coupled receptor signaling pathway ; in utero embryonic development ; vasculature development ; visual learning" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MDMSERIIVTYQVAAAPAEIAARAEALAIEQSVECPLAAVTEQQIRDEIVGRVEAIAPIGETRFSVRVSLASATAPAEPGQLLNMLFGNSSIQPDVTLADVELPPAYPAAFGGPKLGISGLRAKLGAPRRALTGSALKPQGLAPEALAGLAHRLALGGVDLIKDDHGIADQAFSPFAARVPAVARAMREACAVRGAAMLYAPHVSGSLDDMRRQLDIVRREGLSVVMLMPMIVGLANFHLIAKEAEGLIVLAHPSLAGAQRIAPDLLLGKLFRLLGADATIFPHYGGRFAYTPETCRALADAARRDWHDLKPCLPVPAGGIAIDRIKELLAFYGTDVMLLIGGSLLAAGEQLTEHAARFTAEVASHGQ", - "output": "magnesium ion binding ; ribulose-bisphosphate carboxylase activity ; carbon fixation" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MKWSEISIHTKEEAVEAVSHILHEAGASGVAIEDPAELTKEREQQYGEIYALNPDEYPAEGVLIKAYFPQTDSLHETIAGVKSSIDVLPSYDIEIGTGNITVNEVNEEDWATAWKKYYHPVQISDTFTIVPTWEEYTPSSPEEKIIELDPGMAFGTGTHPTTTMCIRALEKTVQQGDTIIDVGTGSGVLSIAAAKLGASSVQAYDLDPVAVESAEMNVRLNKTDDIVSVGQNSLLEGIEGPVDLIVANLLAEIILLFPEDAARVVKSGGLFITSGIIAAKEKVISEALEKAGFTIEEVLRMEDWVAIIARNA", - "output": "cytoplasm ; histone methyltransferase activity ; protein methylation" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MKVLLRLPALLASLTLLQMAASTRNATRTATIRETVDEVKVQVNKAFLDSRDRLKTDMSNLAPTVRHLSGYLKQAKGRTRTAIRVGQVWEQSLKRLRRMVPLTNVTGQGLDLTSLSWEVGCGHPAPTVTCNISNPYRTITGDCNNRKNPELGSANRALARWLPAEYEDGLSLPFGWTPGKTRNGFPLPQPRDVSNQVLDYLNEEEILDQNRSLLFMQWGQIVDHDLDFAPETEMGSDNYSKAQCDELCIQGDNCFPIMFPKGDPKLKTQGKCLPFFRAGFVCPTSPYQSLAREQINALTSFMDASMVYGSEPSLANRLRNLSSPLGLMAVNEEVSDHGRPLLPFVNVKPSPCEVINRTAGVPCFLAGDSRASEQILLATSHTLFLREHNRLARELSRLNPQWDGEKLYQEARRIMGALIQIITFRDYLPILLGDELQKWIPPYQGYKETVDPRISNVFTFAFRFGHLEVPSTVSRLDENYQPWGSEPELPLHKLFFNTWRVVKDGGIDPLVRGLLAKKAKLAHQDKMMTGELRNMLFQPNHTVHGFDLAAINIQRCRDHGQPGYNSWRAFCGLSQPKTLEELSAVLRNEVLAKKLMDLYGTPDNIDIWLGAIAEPLVRRGRVGPLLTCLLGQQFQRIRDGDRFWWENPGVFTEKQRDSLQKMSFSRLVCDNTGINKVPLNPFQPNSYPHSFVDCSAIEKLDLTPWASVKK", - "output": "basolateral plasma membrane ; cytoplasm ; extracellular space ; heme binding ; lactoperoxidase activity ; metal ion binding ; peroxidase activity ; thiocyanate peroxidase activity ; defense response to bacterium ; detection of chemical stimulus involved in sensory perception of bitter taste ; response to oxidative stress" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MAKTSQKVRNHRPAKFSSREYTRCERCGRPHSVYRKFGLCRICLKELGHKGQIPGLKKASW", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; zinc ion binding ; translation" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MLAKRIIPCLDTIGKKVVKGTSFINVRVVGDAKELARRYEKEGADEIVLLDITASEEGRSTFVDVVTDVASELFVPLTVGGGIKNIEDVRRLLKAGADKVSINTSAVENPDLINQIASEFGSQCLVVAIDVKRRGKKSWEVYIKGGKVPTGIDFKDWVIEVEKRGAGEILLTSIDADGHLSGYDYELLEYALSYSNLPLIASGGAGSLEDLYKALKIGVDAVLAASIFHFGTYSIPEVKRYLREKGIWVRLD", - "output": "cytoplasm ; imidazoleglycerol-phosphate synthase activity ; lyase activity ; histidine biosynthetic process" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MFMNLLSQVSNAIFPQVEAAQKMSNRAVAVLRGDVVSGTIWITQNSESDPAVIEGEIKGLTPGLHGFHVHQYGDSTNGCLSAGPHFNPFGKTHGGPNSETRHVGDLGNVEAGADGVAKVHITDKLITLYGANTVIGRSMVVHAGQDDLGQGVGDKAEESAKTGNAGARAACGVIALAAPQ", - "output": "cytosol ; mitochondrion ; copper ion binding ; protein homodimerization activity ; superoxide dismutase activity ; regulation of brood size ; regulation of vulval development ; removal of superoxide radicals ; superoxide metabolic process" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MSPVPLKNAERAHSGVRTVSVLGATGSIGDSTMDLIRAEPERYRVEALTGNANVAGLAKLAKEFNARFVAVADPARLGELRAALAGTDVACGAGESAVIEAAARPADWVMAAISGAAGLKPALAAVDRGTTVALANKECLVCAGDFFMSRATAAGAQILPADSEHNALFQALASGNRHELTRVIITASGGPFRTWAAADIEQATLAQALKHPNWSMGQKITIDSASMMNKGLEVIEASYLFALSPDEIDVLVHPQSIVHGLVEFADRSVVAQLGAPDMRIPIAHCLGFPDRITGRAAKLDLAKIGQLTFEAPDFTRFPGLRLAYDALRTGNGATTVYNAANEVAVAAFIAQKIRFGAIARLVEDTLNSWVRAGNQAPLGSADDAIALDQQARNLAATLLPQIAAKAS", - "output": "1-deoxy-D-xylulose-5-phosphate reductoisomerase activity ; metal ion binding ; NADPH binding ; isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway ; terpenoid biosynthetic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MYNGKDRAQNSYQPMYQRPMQVQGQQQAQSFVGKKNTIGSVHGKAPMLMANNDVFTIGPYRARKDRMRVSVLEKYEVIGYIAAGTYGKVYKAKRQINSGTNSANGSSLNGTNAKIPQFDSTQPKSSSSMDMQANTNALRRNLLKDEGVTPGRIRTTREDVSPHYNSQKQTLIKKPLTVFYAIKKFKTEKDGVEQLHYTGISQSACREMALCRELHNKHLTTLVEIFLERKCVHMVYEYAEHDLLQIIHFHSHPEKRMIPPRMVRSIMWQLLDGVSYLHQNWVLHRDLKPANIMVTIDGCVKIGDLGLARKFHNMLQTLYTGDKVVVTIWYRAPELLLGARHYTPAVDLWSVGCIFAELIGLQPIFKGEEAKLDSKKTVPFQVNQLQRILEVLGTPDQKIWPYLEKYPEYDQITKFPKYRDNLATWYHSAGGRDKHALSLLYHLLNYDPIKRIDAFNALEHKYFTESDIPVSENVFEGLTYKYPARRIHTNDNDIMNLGSRTKNNTQASGITAGAAANALGGLGVNRRILAAAAAAAAAVSGNNASDEPSRKKNRR", - "output": "CKM complex ; mediator complex ; nucleus ; ATP binding ; cyclin-dependent protein serine/threonine kinase activity ; metal ion binding ; protein kinase activity ; protein serine kinase activity ; RNA polymerase II CTD heptapeptide repeat kinase activity ; meiotic cell cycle ; negative regulation of filamentous growth ; negative regulation of transcription by RNA polymerase II ; nuclear-transcribed mRNA catabolic process, non-stop decay ; positive regulation of transcription from RNA polymerase II promoter by galactose ; protein destabilization ; protein phosphorylation" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF", - "output": "actin cytoskeleton ; cytoskeleton ; dense body ; focal adhesion ; nucleus ; plasma membrane ; protein-containing complex ; ATP binding ; hydrolase activity" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MLSNSVNNNNNNNNINNSNSNNNDSNIHKNVKKLMVASIFGGIMSSLIVTPLDVVKTRLQTQNTGSHINQKHVFKGTLDAFKKIYKNEGPLTFWRGVTPSLLMTIPSATIYFTSYEYLKEYLYQFNDTEAYNIYTVPLVAGTLARIFSASVTSPFELLRTNSQGIVLQNAYKNTVAMAASSSTATIGTIPLSSEQRFNSFKLYRDIVNNVGIKGLWRGLGPTLVRDVPFSAIYWAGYEVLKNKLMKSQIDPNFSRNSKSPFFINFIAGATSGTLAAVLTTPIDVIKTRIQMSAQQTLSPSLTPQQQLDFIKKNNSSIYHLKQILSQEGWKGLTKGLVPRVAKVSPACAIMISTFEYIKQSHIADDN", - "output": "mitochondrial inner membrane ; mitochondrion ; mitochondrial transmembrane transport" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MSHLTGTRVSTFNESFLNENEHDSNAVLMELDKGLRSTKQGIQCEAVVRFPRLFEKYPFPILINSSFIKLADYFVSGSNLLRFWVLRVCQQSENHLDKILNIDSFVRCIFVVMHSNDPVARALLLRTLGAVSRVIPEKQQVHHAIRRALDSHDTVEVEAAIYASSCFAAQSSSFAISMCAKISDMIESLQVPVPMKLLLIPVLRHMHHEATTASLVSRLCMDLLPKYPAQSFVVAIIDTLTQLSSRTLVGVPGQLDVLLDFMQDLRTPVRIQVLRSFNELAGRQSVHAWPKPAIKALIDRFELCTNSKEQFLFLSILLKLSECPLTCQQLLREHRVALLRLCIQCISKLDDYTTATQAMAVLSVLVAFGLKKKGSGEQVDDILHMVNLHMEGLLLCTAKRSECTRDLRRVLTYGIRITKANAEFGTSFIGIVTNSLGDKGAYPPANAELMCEALAGLCEHFQLRKYAFSTAEDLIVDENAMDTDELPPPKINPMLARLPLILHKLNTIIDQENCDQQLRSVEILSSLVLQTTMGCYLPQKVVQCFEKCLGRLNCWTLYRIARTASRYGHHYVAAHIYTKVSQIVISDHMHYFLVALSQISQAECILNYGLEYAYMRDNYAPKVAPEPLIPLMKRLEMASNLYQQALASLRAGSSPQHPCTFQLEYLKIRAQFLQTLHLAVTVKNAQVIVPPPAIAGSLAQNSRDYLQKFGHVTNQLRKLVKALKACEETYARLYKSSFDADHVTLEFLEVAEFQCALFAHIIESICYATPPEPPVFLTTGDHPETRYFAASCQRMEQMQKNLPQEPANAKTISNRHLDVIIAQIEIITKTPLCLPRYFFQILQSTQIKLSVSPQPRSATEPVNVQSGSNLVIKVEGVLQHFSKQKKHFRRVESVQLSLTSQLITPPPRSSQELPKQGANDTVTLNQIVKPQRDFLSGSFLLPISNGGHFQVTLETFVVDENGITWCTGPKSSMVVRVLEDPSKQGAPAPSTSQAVGQTRRF", - "output": "cytoplasm ; integrator complex ; nucleus ; snRNA 3'-end processing ; snRNA processing" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MAEGSEKVPIARAGPEDVEQGLPPAYTAAVPPPGPGRLLKAGATVLIAGALLLLAGAIGAFYFWKATERQVYNVHYTMSINGKVQDGSMEIDAGNNLETFKTGSGSEEAVEVHDFQIGITGIRFAGGEKCYIKAQPKARVPEVDAMTKASLSSDLEDEIMPVRFDENSLIWVAADEPIKHNGFLSPKILELCGDLPIFWLRPTYPKDKQRERREMKRNKRQSESNFDAEHRAAAAEEVNTRSTPTQLTQDLGPQSNETRPMQQESDQTLNPDNPYNQLEGEGMAFDPMLDHLGVCCIECRRSYTQCQRICEPLLGYYPWPYNYQGCRTACRIIMPCSWWVARIMGVV", - "output": "endomembrane system ; extracellular region ; membrane ; cartilage development ; cell differentiation ; negative regulation of angiogenesis ; negative regulation of endothelial cell proliferation" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MTTEKRQILVTAALPYANGPIHLGHMVEHIQADIWVRFQRLKGNDCLFICGEDAHGTAIMITAQKQGLPPEALVAKMHKEHARDLGGFLIEYDNFYTTHSPENRELAELIYTRLKDKGDIFAKTISQAYDPVKEIFLPDRFIRGTCPRCGAKDQYGDVCEVCGATYSPTELIDPVSALSGAKPIEKNSEHFFFSLNRYTQLLKKWIDAGHLQPQVANKLKEWFSEDLKPWDISRDAPYFGFEIPHAANKYFYVWLDAPIGYMASLKNLSKQRPSVNFDAYWKEGSQTELYHFVGKDIVYFHALFWPAMLSSAGFRLPTAIYVHGYLTVNGQKMSKSRGTFITAHHYLDHLSPEYLRYYYAAKLSAQVEDIDLNLDDFIQRVNADLIGKYVNLASRCAGFITKNFGGKLANELPEPDLYESFLQTEQTITDYYESLNYSKAVRVIMSLADRANQYIDAKKPWALAKEINQEAQVQAVCTQGLNLFKILTTYLKPILPVTAKKVEQFLNCDELNFANLKTPLLDHSVNPFEPLMQRLLPETAAQLTHE", - "output": "cytoplasm ; ATP binding ; metal ion binding ; methionine-tRNA ligase activity ; methionyl-tRNA aminoacylation" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MLQFVLASASPARRQLLQSIGINPLVYQSNFDESSVAIADHHELVQTLARCKAEVVANQLAAPALVLGCDSVLVLQGKIYGKPKDPADAIARWQSMRGQSGELLTGHTLIDLYQNKTLVRLEITQVDFAWISDRQIAAYVATGEPLNCAGAFALDGRGGLFVDRIVGCPSNVIGLSLPLLRKMLTALGYSPADCW", - "output": "cytoplasm ; nucleoside triphosphate diphosphatase activity ; nucleotide metabolic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MAAKPFFRRRKVCPFSGDNAPKIDYKDTKLLQRYISERGKIVPSRITAVSAKKQRELARAIKRARFLALLPYAVK", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MQSLEQCVNSLEAIVHQLDGSVSRLARNGEASNELCEGILKIKRVFELVPEYDVESARLALFEEVDPMVKTLGDKIEKALIRKRRELENLRQTSELNSLRLSGDLYFSETGIDNQDMDVSTDAIAIASATDAELDELRALKARRAELQELLDGR", - "output": "cytoplasm ; DASH complex ; spindle microtubule ; microtubule plus-end binding ; cell division ; mitotic sister chromatid biorientation ; positive regulation of attachment of spindle microtubules to kinetochore ; positive regulation of microtubule polymerization" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MSKQKKFEENLAELETIVQSLENGEIALEDAITAFQKGMVLSKELQATLDKAEKTLVKVMQEDGTESDFE", - "output": "cytosol ; exodeoxyribonuclease VII complex ; exodeoxyribonuclease VII activity ; DNA catabolic process" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MIFATLEHILTHISFSIISIVITTHLMTFAREIAGLSDLSEKGMIAVFLRITGLLVTRWIYSGHLPLSNLYESLIFLSWGFSLIHMISKIQNHKNFLSSITAPSAILTQGFVTSGLLTEMHQSAILVPALQSHWLIMHVSMMLLSYAALLCGSLLSIALLVITFRKKLDIIFLLIRLFSFGEIQYLNEKRSILQNTSFSFRNYHKYQLTQQLDHWSYRVIGIGFTLLTLGILSGAVWANEAWGSYWNWDPKETWAFITWTISAIYLHTRTNKNLQSANSAIVASIGFLIIWICYFGVNLLGIGLHSYGSFALR", - "output": "chloroplast thylakoid membrane ; heme binding ; cytochrome complex assembly" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MSSIIHGAGAATTTLSTFNSVDSKKLFVAPSRTNLSVRSQRYIVAGSDASKKSFGSGLRVRHSQKLIPNAVATKEADTSASTGHELLLFEALQEGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKFGDLRVLDTPICENAFTGMGIGAAMTGLRPVIEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTIPVVIRGPGGVGRQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNLKEKIPDEDYVCNLEEAEMVRPGEHITILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLHTIGNSVKKTHRVLIVEECMRTGGIGASLTAAINENFHDYLDAPVMCLSSQDVPTPYAGTLEEWTVVQPAQIVTAVEQLCQ", - "output": "chloroplast ; chloroplast envelope ; chloroplast stroma ; nucleus ; plastid pyruvate dehydrogenase complex ; pyruvate dehydrogenase (acetyl-transferring) activity ; acetyl-CoA biosynthetic process from pyruvate ; fatty acid biosynthetic process ; glycolytic process" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MGYKSDQLLIVVSILEGRHFPKRSRHMLVIDAKFDGEQLSTDPVPHLEQPQFATELAWELDRKTLHQHRLQRTPIKLQCFALDTLTSAKESVGYVVLDLRAAQEKKQAPKWYSLLSSKYTKFKPEIQLNISLETDNKPAVDTFKAKEAPPRRSKVPGDLAGLEPKSLVPILNEAEGYHQIGPAEYCKDYFVLSVTIAFATQLEQLIPSTLRLPEPQPEFFFYYSLLGNDVTNEPFTDLINPEFEPERASVRIRSSKEVLCMYLSVQPKLQIHLCCGDQSLGSTDIALTGLLNKASVEIEHHPVVVEGAFILTPPNRAKQNLSAVPLEMSPTIGVSIALQKEIGLQSVHHPKEQPQSVAAEEVPTTPLKKSANLKEGARSPPPPKPLMFSDSPPTKDEATESEAESIKSDFQAEPPLSKPLTRSKSPPLSEPPLSGSHCPTPIQGVSAIAKNTSESSSAQKITVPPAAHHFCFTIDLRSIRNVDVGFPVNCILRYSYPFFGSAAPIMTNPPVEVQKNMEVFLPQSYCAFDFATLPHQIQDTFLRLPLLVELWHKDKMTKDLLIGVTKIQLSNVLSSEKTRFLGPHGDQCWRQTFSERITVTAVEGSKNKVAELSYIITLEDYGLVKVREVVVSESSQSTGQEKGSLPAQTLQSTAPLPEPRETLEYKAALELEMWKEMQEDLFVNQLKKKELVHMQALAEEWKRRDKEREALVKKKVAEYTVLEEQLQKALADLEKRERQLANDEMELKKLKAQMQLDCERSIQERQDSIRRVREDCMHQIELERSKAKQLEEDKLRLQQQVELERKLESTTKSKLHYKQQWGRALKELARLKQREQENAMARLKKQQQELEHMRLRYLAAEEKDVVKTERQELEEIRNELNR", - "output": "cytoplasm ; microtubule organizing center" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MTIHHETRPTLNLIRLANGEGLELPAYESQGAAGMDLRAAVDGDAPLTLPPGKRALVPTGFIFEIPEGFEGQVRPRSGLAFKHGITCLNSPGTVDSDYRGEVKVLLANLGEEAFVIERGMRIAQMVIAPVTQARVAEITAASETARGAGGFGSTGV", - "output": "dUTP diphosphatase activity ; magnesium ion binding ; dUMP biosynthetic process ; dUTP catabolic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MAIANNKKAFHDFFIEDRIEAGLVLEGWEVKAIRAARVQLKESYIYWKKDAFYLVGCHITALPTASTHIKPDAVRPRKLLLNQSEINKLIGKTERAGYTIVPLDLHFSRGKIKMEIGLAKGKKQHDKRQSMKEADWKREKQRLIKHTR", - "output": "cytoplasm ; RNA binding ; trans-translation" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MIVAFCLYKYFPFGGLQRDFMRIASTVAARGHHVRVYTQSWEGDCPKAFELIQVPVKSHTNHGRNAEYYAWVQNHLKEHPADRVVGFNKMPGLDVYFAADVCYAEKVAQEKGFLYRLTSRYRHYAAFERATFEQGKSTKLMMLTDKQIADFQKHYQTEPERFQILPPGIYPDRKYSEQIPNSREIYRQKNGIKEQQNLLLQVGSDFGRKGVDRSIEALASLPESLRHNTLLFVVGQDKPRKFEALAEKLGVRSNVHFFSGRNDVSELMAAADLLLHPAYQEAAGIVLLEAITAGLPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKALTQSPLRMAWAENARHYADTQDLYSLPEKAADIITGGLDG", - "output": "glycosyltransferase activity ; lipopolysaccharide glucosyltransferase I activity ; lipopolysaccharide core region biosynthetic process" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MAKKVAAQIKLQLPAGKATPAPPVGPALGQHGVNIMEFCKRFNAETADKAGMILPVVITVYEDKSFTFIIKTPPASFLLKKAAGIEKGSSEPKRKIVGKVTRKQIEEIAKTKMPDLNANSLEAAMKIIEGTAKSMGIEVVD", - "output": "ribonucleoprotein complex ; ribosome ; large ribosomal subunit rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MRAVVQRVTNARVTVSGRTVGQITRPGLVVLVGVTHTDTVRQAHALAVKVHELRILRGELSCAQTGAPILVVSQFTLYGDTRKGRRPSWDAAAPAATAEPLIEAFVAELRRRGAEVATGVFGADMLVELANDGPVTLVLDVD", - "output": "cytoplasm ; D-aminoacyl-tRNA deacylase activity ; Gly-tRNA(Ala) hydrolase activity ; Ser(Gly)-tRNA(Ala) hydrolase activity ; tRNA binding ; D-amino acid catabolic process" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MSVMFDPQAAIYPFPPKPTPLNDDEKQFYREKIKRLLKERNAVMVAHYYTDPEIQQLAEETGGCISDSLEMARFGTKHAASTLLVAGVRFMGETAKILSPEKTILMPTLAAECSLDLGCPIDEFSAFCDAHPDRTVVVYANTSAAVKARADWVVTSSIAVELIEHLDSLGEKIIWAPDRHLGNYVQKQTGADVLCWQGACIVHDEFKTQALTRLKKIYPDAALLVHPESPQSIVEMADAVGSTSQLIKAAKTLPHRQLIVATDRGIFYKMQQAVPEKELLEAPTAGEGATCRSCAHCPWMAMNGLKAIAEGLEQGGAAHEIQVDAALREGALLPLNRMLDFAATLRA", - "output": "cytoplasm ; 4 iron, 4 sulfur cluster binding ; metal ion binding ; quinolinate synthetase A activity ; NAD biosynthetic process" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MKKIRKGDRVVILSGNDKGRSGEVIKVNPGESKALVRGINMVKRHQRQTQKQEAGIISKEAPIHLSNLAIADPKDGKPTRVGFRMNADGGKVRFAKRSGELIDG", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MTATLRPYLNAVRATLQAALCLENFSSQVVERHNKPEVEVRSSKELLLQPVVISRNEKEKVLIEGSINSVRVSIAVKQADEIEKILCHKFMRFMMMRAENFFILRRKPVEGYDISFLITNFHTEQMYKHKLVDFVIHFMEEIDKEISEMKLSVNARARIVAEEFLKNF", - "output": "Arp2/3 protein complex ; cell projection ; cytoplasm ; nucleus ; site of double-strand break ; actin binding ; actin filament polymerization ; Arp2/3 complex-mediated actin nucleation" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MNKRHSGQRVVVGLSGGVDSAVTAWLLKQQGYEVIGIFMKNWEDDDDSEYCSSNVDFIDAAAVADVIGIEIEHVNFAAEYKDRVFAEFLREYQAGRTPNPDILCNAEIKFKAFLDHALRLGAQKIATGHYARVRCVAADGRVLDAAQAQMSDGRFELLKGLDPSKDQSYFLHRLNQAQLSKTLFPVGELLKTEVRRLALEIGLPNAKKKDSTGICFIGERPFRDFLNRYIAREPGPIKDDKGRTIGQHVGLSFYTLGQRQGLGIGGLKAKGAQRGGGEHAPWFVARKDLATNTLWVVQGHEHPWLQSHGLSAQDASWVAGTAPQAGRFSAKTRYRQLDAPCTLAAGAGAAFHLSFPEPQWAVTPGQSAVLYDDEVCLGGGVIAA", - "output": "cytoplasm ; ATP binding ; sulfurtransferase activity ; tRNA binding ; tRNA modification" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MNITKIKERQKRIRNFSIIAHIDHGKSTLADRILEITGTIDKRVMQTQILDSMDLERERGITIKLNAVQILYQAQNKQQYIMHLIDTPGHVDFSYEVSRSLAACEGAILVIDAAQGIQSQTLANVYLAIENNLTIIPVLNKVDLPSADVPRVKGEIKDILNIDPEMAISASGKTGAGVIDILERIVTQISPPKGDPEAPLQALIFDSYFDPYKGVVPSIRIINGTVKKGDQILFMAGKHVYEVVEVGVYNPKQISKDYLAPGDVGYLTAAIKSINHVSVGDTITSNHKPAIQPLPGYKKMNSVVFCGLYPIEINKYEALKEALEKLKLSDSSLVFEPESSSALGLGFRTGFLGLLHMEIIQERISREFGVEVITTAPSVIYHVYNLKGEKILVDNPSKLPSPQMIERIEEPFIKATIICPEIYIGKVMELSQNKRGSLQNIEYIDQQRTKINYLLPFSETIYNYFDKLKSLTKGYASFDYEMENYRVSKLQKMDILLNGEVVDALSLIVHKDFAYSRGKTICETLKSFIPKQMFEIPIQAALGKKIIARETIKAMRKDVTAKLYGGDVTRKKKLLEKQKKGKKKMKTLGKVDLPQKAFLAILSAK", - "output": "plasma membrane ; GTP binding ; GTPase activity ; ribosome binding ; translation elongation factor activity ; positive regulation of translation" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MSRILLTGFEPFGGEKVNPSELAVKQLEGKTIAGLEVVAGVLPVVTVKCIDEAVKLIEKYEPVAVLNVGQAGGRVELSIEKVAINVKDYRIPDNEGNQIRYAPVVEGGPDAYFATIPVEKIADSLVEKVIPASVSYTAGTYCCNEVFYGVSHYLRNNKPGVLNGFIHIPFILEQAAGAKPPRASMPLEVIVKGLEIAVEVVAEGLEK", - "output": "cytosol ; pyroglutamyl-peptidase activity ; proteolysis" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MKSAVETLNPTRVRLSIEVPFEELKDSLDAAYKKINQQVTVKGFRKGKIPARVIDQRFGRGAVLEEAVNDALPKFYTEAVNEGELNVLGQPEVDITELKDGELLAFTAEVDVRPEIEIPDYSGIEVTVDALEVTDEEVEKAVEQLRERFAATNPVERAAADGDVVTIDLQAKVDGEVLEDGVADGVSYTIGSGELLDGIDEAVTGLEAGGEATFTSQLKGGSAEGKDAEVTVKVTAVAARELPELDDDFAQMASEFDTLEELKADSRKRLETTKQYDQATQAQERVLEELLKLAEVPIPEKLLADEVQTRKHNLEHHQLGQMGLDLEKYLEIQGKTLEEFENETSEQAIKGIKTQFILDELVNKEKLNVNQEELTEHLMRRAASSGMSPDQFAQAVVEGGQVPMLVGEVARGKALAVVVEAAKVVDTNGEVVDLEDDEEAAEAAAETTEAPAEAAAEDKAEDKKAEEKNEA", - "output": "cytoplasm ; peptidyl-prolyl cis-trans isomerase activity ; cell cycle ; cell division ; protein folding ; protein transport" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MPVLHNRISNDALKAKMLAESEPRTTISFYKYFHIADPKVTRAALYQLFTALNVFGRVYLAHEGMNAQISVPASNVETFRAQLYAFDPALEGLRLNIALDDDGKSFWVLRMKVRDRIVADGIDDPHFDASNVGEYLQAAEVNAMLDDPDALFIDMRNHYEYEVGHFENALEIPADTFREQLPKAVEMMQAHKDKKIVMYCTGGIRCEKASAWMKHNGFNKVWHIEGGIIEYARKAREQGLPVRFIGKNFVFDERMGERISDEIIAHCHQCGAPCDSHTNCKNDGCHLLFIQCPVCAEKYKGCCSEICCEESALPPEEQRRRRAGRENGNKIFNKSRGRLNTTLGIPEPTE", - "output": "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen ; tRNA modification" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MARIAGVDLPKKKRIEYGLTYIYGIGLFTSRKILDKVGISYDKRVHELSEDEAAAIRKEIQENYMVEGDLRKQVAMDIKALMDLGSFRGLRHRKGLPVRGQKTKTNARTRKGKRKTVGAKS", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; tRNA binding ; translation" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MTNIRKSHPLFKIINDSLIDLPAPSSISSWWNFGSLLGICLAIQILTGLFLAMHYTSDTTTAFQSVTHICRDVNYGWILRYLHANGASMFFICLFLHVGRGLYYGSYIYKETWNVGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFLLPFIISALVMVHLLFLHETGSNNPTGIPSDSDMIPFHPYYTIKDMLGALAMILVLMTLVLFSPDLLGDPDNYIPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILIVMPLLHTSKQRSMMFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFLLILVLMPITSIVENHLLKW", - "output": "mitochondrial inner membrane ; respiratory chain complex III ; metal ion binding ; ubiquinol-cytochrome-c reductase activity ; respiratory electron transport chain" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MNAPDRFELFLLGEGESKLKIDPDTKAPNAVVITFEKEDHTLGNLIRAELLNDRKVLFAAYKVEHPFFARFKLRIQTTEGYDPKDALKNACNSIINKLGALKTNFETEWNLQTLAADDAF", - "output": "nucleus ; RNA polymerase II, core complex ; DNA binding ; protein dimerization activity ; RNA polymerase II activity ; RNA-templated transcription ; termination of RNA polymerase II transcription ; transcription by RNA polymerase II ; transcription elongation by RNA polymerase II ; transcription initiation at RNA polymerase II promoter" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MTIEDRGDAHVITHSLAKHTLSRLRDTTTEQVSFRKGLVKLGRISGYEIIDGAMETEFTAFETPLTETTGERVTGLDDVVIINVLRAATPFVEGLLKAFPRAKQGVISAGRDEDAGMDADGEFPITVDYVKLPDISEGDTVIVADPMLATGSTMCTVLDHVTDEMPAAGVEDLFVLSAVSAPDGLLRVGDQFPDADLLTVAIDDTLTDDGYIVPGLGDAGDRAFRTT", - "output": "GTP binding ; magnesium ion binding ; uracil phosphoribosyltransferase activity ; UMP salvage ; uracil salvage" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MIPFSLKNGTLCVEDIPLPEIAAQYGTPCYVYSHSYLTERARRFTKALDGAGKGKSLVAFAVKANPSQAILASFAKEGLGADVVSAGEIRRAVHAGIPPERIVFSGVGKTAEEMRYALEIGIGQFNIESVSEIEMLAEVATSLGKKAAVALRINPDVDPHTHAKIATGKADTKFGIAAEDALSAYEKLASYPSLKIQGIASHIGSQITDLAPFEAAAERIYEIITALEKAGHAIETADLGGGLGVRYKDDQPEPPSVEAYGEMIKRVTKGWNCRLIFEPGRSLIANAGVLLSKVIRIKESKTARFVILDAAMNDLVRPTLYDAYHEIKAVTPSAQTYQADIVGPVCETGDIFARNRSISAVKADDLMAIMSAGAYGATMASAYNSRPLVAEVMVSGNKSALIRKRQSVEDLMRDEQKVEWL", - "output": "diaminopimelate decarboxylase activity ; pyridoxal phosphate binding ; lysine biosynthetic process via diaminopimelate" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MSKSWDVIVIGGGHAGCEAAAASARAGARTLLLTHKLETIGEMSCNPAIGGLGKGHLVREIDALDGVMGRMADKAGIQFRMLNRSKGPAVRGPRSQIDRRLYREAMQAELFSTGNLDIIAAAAEDLIVEDGKVAGAVDAAGQAYRAPRVILTTGTFLKGVIHRGEDRIPAGRVGDQPAIGLSDRLYGLGFQMGRLKTGTPARLDGKTIAWDRLESQAADDTPVPFSYLNHRIDVPQIACGVTYTTEETHRIIAERIGESLVYSGRATGVGPRYCPSIEDKVVRFADKTSHQIFLEPEGLDDDTVYPNGISTSVSEETQLLFLRTIPGLEQVEVIRYGYAIEYDYVDPRELYPTLETKRLPGLYLAGQINGTTGYEEAGAQGLVAGLNAALAVQGREPAIFARDEAYIGVMIDDLVTRGVTEPYRMFTSRAEFRLTLRADNADQRLSDRGISLGVVGPVRAAAWTEKKARLDAARAFARSVTLTPNEAVKAGFKVNSDGVRRDVFAMLAYPDVTLDDLGRIWPEVFTWNTDVREQIEIEAAYAGYLDRQRADAESLRKDEDLRLPADLDYAEIGSLSNEVRGKLARVRPLTLGQAARIEGVTPGALTALLAHVRRGRAA", - "output": "cytoplasm ; flavin adenine dinucleotide binding ; tRNA wobble uridine modification" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MAITAAASRLGTSAFSDAPPVELRANWSEEDLETVIRAVYRQVLGNDYVMASERLVSAESLLRNGKITVREFVRAVAKSELYKEKFLYGNFQTRVIELNYKHLLGRAPYDESEVIFHLDLYENEGFDADIDSYIDSPEYTNSFGDWVVPYYRGFNTQPGQKTVGFNRIFRLYRGYANSDRAQAEGSMSRLARDLATNRANTVVPPSNSDTAFAYYTPSADVPPRACLGGSFGESGRVYRIEVAGIRQPGYPGVRRSSTAFLVPYEQLSAKMQQLQRTGARIISVNPA", - "output": "phycobilisome ; plasma membrane-derived thylakoid membrane ; photosynthesis" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MALAVLHVLEPFPTETPPLAVLLPPGGPWPVTGVGLVLALRPASESPAGPALLVAAVEGSGAQCEQRGPGPPPLLVSRTLLRVLALSPGARVRARPVRRPPALGWALLGTSPGPGLGPRVGPLLVRRGETLPVPGSRVLETRPALQGLLGPGTRLAVTELQGRTKLDPESRDHNHPPPPPVVSSFAVSHSIRQLRGVLGGTGDALGVSRSCLRSLGLFQGEWVWVARVGELPNTSQPHLAQVQVLEPRWDLSARLGPNSGQPGEPLADGLVFVPATLAFNLGCDPLEVGELRIQRYLEDSTAAEDKGSCSLLPGPPFARELHIEVLPSPHCGVNGKYDHVLYQHFHTPRVVQEGDVLCVSTAGQVEILEGSLERLPRWREVFFKVKKTVGEAPDGPASAFLADTTHTSLYLAGTTLSRVPPLPSGRSPPWDSLSPPGLEALVNELCAVLKPHLQPGGTLLTGTSCVLLQGPPGSGKTTAVTAACSRLGLHLLKVPCSSLCADSSRTVETKLQTTFSRARRCRPVVLLLTALDLLGRDRDGLGEDARVVATLRHLLLDEDPLSRCPPLMVVATTSRVQDLPTDVRTAFPHELEVPVLSESQRLSVLQALTAHLPLGQEVNLSQLARRCAGFVVGDLYALLTHASRAACTRIKAAGLAMSEEDEGELCAAGFPLLAEDFGQALDQLQTAHSQAVGAPKIPSVSWHDVGGLQDVKKEILETIQLPLEHPELLSLGLRRSGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGASEDRASQLRVLSAITRKFKLEASVSLMNVLDCCPPQLTGADLYSLCSDAMMTALKRRVRDLEEGLEPRSSALLLTMEDLLQAAARLQPSVSEQELLRYKRIQRKFAAC", - "output": "cytoplasm ; cytosol ; peroxisomal membrane ; peroxisome ; photoreceptor cell cilium ; photoreceptor outer segment ; ATP binding ; ATP hydrolysis activity ; protein transporter activity ; protein-containing complex binding ; ubiquitin-dependent protein binding ; peroxisome organization ; protein import into peroxisome matrix ; protein import into peroxisome matrix, receptor recycling ; protein import into peroxisome matrix, translocation ; protein stabilization ; protein targeting to peroxisome ; protein unfolding" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MSYIVRFTGLLLLNAFIVRGRPVGGIQH", - "output": "leucine biosynthetic process" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MGRLPVLLLWLAWWLSQAGIACGAGSVRLAGGLTLGGLFPVHARGAAGRACGALKKEQGVHRLEAMLYALDRVNADPELLPGVRLGARLLDTCSRDTYALEQALSFVQALIRGRGDGDEASVRCPGGVPPLRSAPPERVVAVVGASASSVSIMVANVLRLFAIPQISYASTAPELSDSTRYDFFSRVVPPDSYQAQAMVDIVRALGWNYVSTLASEGNYGESGVEAFVQISREAGGVCIAQSIKIPREPKPGEFHKVIRRLMETPNARGIIIFANEDDIRRVLEATRQANLTGHFLWVGSDSWGSKISPILNLEEEAVGAITILPKRASIDGFDQYFMTRSLENNRRNIWFAEFWEENFNCKLTSSGGQSDDSTRKCTGEERIGQDSAYEQEGKVQFVIDAVYAIAHALHSMHQALCPGHTGLCPAMEPTDGRTLLHYIRAVRFNGSAGTPVMFNENGDAPGRYDIFQYQATNGSASSGGYQAVGQWAEALRLDMEVLRWSGDPHEVPPSQCSLPCGPGERKKMVKGVPCCWHCEACDGYRFQVDEFTCEACPGDMRPTPNHTGCRPTPVVRLTWSSPWAALPLLLAVLGIMATTTIMATFMRHNDTPIVRASGRELSYVLLTGIFLIYAITFLMVAEPCAAICAARRLLLGLGTTLSYSALLTKTNRIYRIFEQGKRSVTPPPFISPTSQLVITFGLTSLQVVGVIAWLGAQPPHSVIDYEEQRTVDPEQARGVLKCDMSDLSLIGCLGYSLLLMVTCTVYAIKARGVPETFNEAKPIGFTMYTTCIIWLAFVPIFFGTAQSAEKIYIQTTTLTVSLSLSASVSLGMLYVPKTYVILFHPEQNVQKRKRSLKKTSTMAAPPQNENAEDAK", - "output": "dendrite ; endoplasmic reticulum membrane ; Golgi membrane ; membrane ; new growing cell tip ; plasma membrane ; adenylate cyclase inhibiting G protein-coupled glutamate receptor activity ; glutamate receptor activity ; protein homodimerization activity ; adenylate cyclase-inhibiting G protein-coupled glutamate receptor signaling pathway ; chemical synaptic transmission ; detection of light stimulus involved in visual perception ; G protein-coupled glutamate receptor signaling pathway ; locomotory behavior ; positive regulation of calcium ion import ; positive regulation of calcium ion import across plasma membrane ; regulation of synaptic transmission, glutamatergic ; retina development in camera-type eye ; sensory perception of light stimulus ; signal transduction" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MSSENVPSFRWTQSLRRGLSNWTHAVKGDVLADARAIVSALDFHQVAQVQRMMRKDKRSEADLTRLRDMNKEVDALMMMRSAQKDNILKVGGLSKDELMELASDLDKLRKKVQRTEGGGQPGVYAGNLTSSQLNQRSEILKMMGMGTGPRGPVGGVVKVWDIKDSSLLVNQFGSMPALTIACMTQQGGEQMNDVVQALTSLGLVYTVKYPNLSDLEKLTEKHPCLKLITQEPAQINISGYNLSLSAAVKADACMIDGGNMLETLQVKPSMFSTLIKTILEVKNREGMFVSPSPGQRNPYENILYKVCLSGDGWPYIGSRSQIKGRAWENTTVDLEGKPSVNHPPVRNGGSPDLKQIPKTKEDEVIRAIEQLDPRGTTWVDIEGPPGDPVELALFQPETGNYLHCYRRPHNENAFKDQSKFSHGLLLKDLADTQPGLISCIIRHLPNNMVLTAQGNDDIIKLLEMHGRRDIKVLDVKLSSDQARLMEDVVWERYNMLCVKHTGLVIKKKKKGAAPGSANPHCALLDCIMFDATVTGYLRDQKPKRLLPLDTLYRDNANLINL", - "output": "helical viral capsid ; host cell cytoplasm ; ribonucleoprotein complex ; viral nucleocapsid ; hydrolase activity ; metal ion binding ; RNA binding ; negative stranded viral RNA replication ; RNA-templated viral transcription ; suppression by virus of host viral-induced cytoplasmic pattern recognition receptor signaling pathway via inhibition of IKBKE activity" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MATIHVDGKTLEVDGADNLLQACLSLGLDIPYFCWHPALGSVGACRQCAVKQYTDENDKRGRLVMSCMTPATDNTWISIEDEEAKQFRASVVEWLMTNHPHDCPVCEEGGHCHLQDMTVMTGHNERRYRFTKRTHQNQELGPFIAHEMNRCIACYRCVRYYKDYAGGTDLGVYGAHDNVYFGRVEDGVLESEFSGNLTEVCPTGVFTDKTHSERYNRKWDMQFAPSICHGCSSGCNISPGERYGEIRRIENRYNGSVNHYFLCDRGRFGYGYVNREDRPRQPLLVLSKQKLSLDGALDQAAALLKERKVVGIGSPRASLESNFALRELVGEGNFYSGINEGELDRLRLILQVMQEGPLPVPSIRDIEDHDAVFVLGEDLTQTAARIALALRQSVKGKAVEMAADMKVQPWLDAAVKNIAQHAQNPLFIASVSATRLDDVAEETVHAAPDDLARLGFAVAHAIDPSAPSVADLDPQAQAFAQRITDALLAAKRPLVVSGNSLGNKALIEAAANIAKALKQREKNGSISLVVGEANSLGLALFGGDSVEAALERLTSGQADAVVVLENDLYRRTDAARVDAALAAAKVVIVADHQQTATTAKAHLVLPAASFAEGDGTLVSQEGRAQRFFQVFDPTYYDARNMVREGWRWLHAIHSTLQGKRVDWTQLDHVTEAVAEAKPILAGIRDAAPAASFRIKGLKLAREPHRYSGRTAMRANISVHEPRTPQDIDSAFAFSMEGYSGSQEDRQQIPFAWSPGWNSPQAWNKFQDEVGGHLRAGDPGVRLIEPKGEGLDWFQAVPVPFSAKADSWKVVPLYHLFGSEENSSRAAPIQQRIPETYVALSKEDADRLGVNDGATLGFQLKGQALRLPLRIDEQLGAGLIGLPVGFAGIPAAIAGCSVEGLQEAAQ", - "output": "plasma membrane respiratory chain complex I ; 2 iron, 2 sulfur cluster binding ; 4 iron, 4 sulfur cluster binding ; metal ion binding ; NADH dehydrogenase (ubiquinone) activity ; quinone binding ; ATP synthesis coupled electron transport ; cellular respiration" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MFFNKKNNQDELKKLAATEAAKSITTEITLGVGTGSTVGFLIEELVNYRDKIKTVVSSSEDSTRKLKALGFDVVDLNYAGEIDLYIDGADECNNHKELIKGGGAALTREKICVAAAKKFICIIDESKKVNTLGNFPLPIEVIPMARSYIARQIVKLGGQPVYREQTITDNGNVILDVYNLKIDNPLKLETELNQITGVVTNGIFALKPADTVIMATKDSNIVVL", - "output": "ribose-5-phosphate isomerase activity ; pentose-phosphate shunt, non-oxidative branch" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "QEGDPEAGAKAFNQCQTCHVIVDDSGTTIAGRNAKTGPNLYGVVGRTAGTQADFKGYGEGMKEAGAKGLAWDEEHFVQYVQDPTKFLKEYTGDAKAKGKMTFKLKKEADAHNIWAYLQQVAVRP", - "output": "periplasmic space ; electron transfer activity ; heme binding ; metal ion binding ; photosynthesis" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "VFCRFNGQQCTSDGQCCYGKCRTAFLRMICMGG", - "output": "extracellular region ; toxin activity" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MGVAFDKCETRPANIDAILSGLDRYNPETTTIFQDYVVQQCEDRTFDCYANLALLKLYQFNPHLLQAETVTNILAKALTVFPSPAFSLCLSLLPAHTQPFPSNTEAQAASQTSDFVESVQKLARLSTLLESAQYAQFWSTLNSDDLYADLTADVAGFEELVRIRIAVEVGKAFREINAEVLEQWLDLRSREALEKFVAEVCSWEVDKSGPNGTVVKVPTNKENEVRSEVKSERVGVEMFGRVIRRGFEQAA", - "output": "eukaryotic 43S preinitiation complex ; eukaryotic 48S preinitiation complex ; eukaryotic translation initiation factor 3 complex ; ribosome binding ; RNA binding ; translation initiation factor activity ; formation of cytoplasmic translation initiation complex ; regulation of translational initiation" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MEQVIPKVPERPRRRITRSEEPEQLRSESEFEREKSGSKDSELDLPPVPKTRPNRKPLASSSAHASSDDVSVKPEPQIQAQLQPEAVIETEPTVEHPIVDELEAKLPVEQPVLDEVELDEPVTQEVEPSGELLPEESTIKESLEEQIIDDFADEPVEEECKEVASPELIGDEAIQDEELEKPVKEEPIIQTDDKTLAEAIVPSVCEESEADIAEEPKETPEDASEAVVEAAREESSEVSPEASPEVPPEKTQVSVDQLSSTANLTEGAKEAPKEEQKETSEATSEETPEDSSVNAKPLFKEVTPGNVSSKEAIPSNTSPKEGSPATQKKKQGKSPPVPKKPSSKIAAFQQMFQNQQLQPEHTPSPKEPAAPKTGGFSGNRAQFAQNLNGMIALPGMAQLTPALAKRLGVSTSSDDAETGAEVETKNTKDEAELPKVPARSKKTRGPHKRLPKTVASIEKVETKSTSNISVVKAWTISFKPDLPERADDQPMEAELTAGEAIAPSEPAGLEDVEAEDLNEASPEEPLQIISESGNSDESEIQHTSDPSIAQNVEHEEEVHEEAEAAPEAEPEAEEIALDTEESNPTAFIAETYDEDTEVETPTA", - "output": "actin cortical patch" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MNKEEILEAIKNMTVLELAELVKALEEEFGVSAAAPVAVAAAPAAGAPAAAPAEEKTEFDVILQEVGSDKIKVIKVVREVTGLGLKEAKDLVESAPKPVKEGVSKDEANQIKAKFEEVGAKVEIK", - "output": "ribonucleoprotein complex ; ribosome ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MTHSLRVIFAGTPEFAAAALAAIHEAGFPVPLVLTQPDRPAGRGMKLQASAVKRYALERGMAVAQPPSLRRAGKYPAEAVAALDLLHATPHDVMVVAAYGLLLPQEVLELPRHGCINIHASLLPRWRGAAPIHRAIEAGDAETGVTLMQMDAGLDTGAMLHEARVAIAPDDTTATLHDKLAAAGARLVVDALVELERTGALAATPQPADGVTYAEKIGKHEAALDWRKPAAALARQVRAFDPFPGGAGTLDGATLKLWAADAVPGRDDAAPGTIVDIGPDGVVIACGEGALRVTQLQKPGGKRLPAREFLAGAPLAVGQRFAPADAA", - "output": "methionyl-tRNA formyltransferase activity" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MNPGRLGLAPLLQENPLWISWHDSNWIPVLNPGNVMDYFSEKSNPFYDRTCNNEIVRMQRQSLELLNNMTGVEYIPLHVQDPILYVIRKQHRHSPTEATPMADYYIIAGTVYQAPDLASVFNSRILSTVHHLQTAFDEASSYSRYHPSKGYSWDFSSNKAIAEKTKTQTKKEAPVKEEPSSIFQRQRVDMLLGDLLRKFPLPLPQMTNNPTGGNPSDTANASNNHGGAAGDSDHVGADATLIKQEPTEGGVGRAGNNDVPPEKKMKL", - "output": "core mediator complex ; mediator complex ; transcription coactivator activity ; regulation of transcription by RNA polymerase II" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MIGGKKKCIGLIFGGNSNEHEVSISSAKTVFQAFKSEINKERFTIRAFYINKYGDWLDSDSSEKILIDESKNKNTTKKQIFNQEKINFLDGVDFQNVDVWFPLLHGINGEDGSIHGLLRFTKKPLVGCGIIGSALGMDKILMKIIFSNLKIPQVNYLVFQNQDLNDEEVKNKLIHEILKKLNFPVFVKPSNSGSSLGISKVINKSEIIPALEKARGIDPSILIEEGLEVREIECGIIGNSKLLTSEIGEVNYKSDWYDYNSKYHSNNKIIIPAEIDSKISKEIKEIAIKSCRALNIFGFARVDFFLEKSSNKIFLNEINTIPGFTKNSMFPMLWKASGLKIEQLVAKLVDISLDL", - "output": "cytoplasm ; ATP binding ; D-alanine-D-alanine ligase activity ; metal ion binding ; cell wall organization ; peptidoglycan biosynthetic process ; regulation of cell shape" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MAVTMADITKLRKMTGAGMMDCKNALTDAEGDFDKAMKIIREKGQAVAAKRSDREASEGCVLVKVEEGFGAIIALKCETDFVAQNADFVKLTQDILDAAVANKCKTLEEVLALPMGDATVAQAVTDRTGITGEKMELDGYMVLEGATIAAYNHMNRNGLCTMVAFNKKVDEQLAKQVAMQVAAMNPIAVDEDGVSEEVKQKEIEVAVEKTKVEQVQKAVEAALKKANINPAHVDSEDHMESNMAKGWITAEDVAKAKEIIATVSAEKAANMPEQMIQNIAKGRLAKFLKEVCLLNQEDIMDAKKTVREVLKEADPELKVVDFKRFTLRAE", - "output": "cytoplasm ; translation elongation factor activity" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MSDNSQKKVIVGMSGGVDSSVSAYLLQQQGYHVEGLFMKNWEEDDDTEYCSAATDLADAQAVCDKLGIELHTVNFAAEYWDNVFELFLEEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIATGHYVRRHDVDGKSRLLRGMDGNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEELELATAKKKDSTGICFIGERKFTDFLARYLPAQPGPILSVDDNKPMGQHQGLMYHTLGQRKGLGIGGVKDGGEDPWYVVDKDVANNILYVAQGHEHPRLMSHGLIAQQLHWVDRQPLTAELRCTVKTRYRQADIPCTVTPLGDDRITVRFDEPVAAVTPGQSAVFYLDDVCLGGGIIEERLQE", - "output": "cytoplasm ; ATP binding ; sulfurtransferase activity ; tRNA binding ; tRNA modification" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MPLPQPLLGGASPAPARAASSFLHPLLHTRHRVSTAPAAASSFVPASHSSHANDAMLLRRAADVADRSAGLTSPHPNFGCVIARPQLNTDSADSWVVGEGFLYAQGTPCAELLASQEAGEHARGGTAYLNLEPGDCFGDNTAVGSLVQAGITRVVVGLRHPLKHLRGKAIQALRNEGIQVDVVGEDLQSKLFKEALKSCLTVNAPLLYRAAFHVPFSVLKYAMTADGKIAASSGHASWISGKASRGRVFELRGRSDAVIVGGNTVRFDDPRLTARHVKGHVPVRIVMSQSLNLPEEANLWNLNDAYTIVATQRGARRDFQRKLAMKGVEVVEFDMLNPRAVMSYCYDRGYLAVLWECGGTLAASAISASVIHKVYAFWAPKIIGGLNAPTPVGELGMSQMTQAINLIDVSYEQIDRDMLMSGFIEPIPDLSPVIPSVEEIPSIDPEVSPYETNIISFYKTWDIFGAFSNFSPHSIQMPDENGDYFTWPTVEHYYQAHKFVGVDNPQARDIVQEIKLAKSPEEAARIGRTRQKGFPELVRTDWESTKIDVMYRAIKCKFSTYPHLTNMLLSTAGSVLVEASPHDLFWGGGREGEGLNYLGRLLMQLRSEILGTVPASAEVGEAD", - "output": "chloroplast ; 5-amino-6-(5-phosphoribosylamino)uracil reductase activity ; diaminohydroxyphosphoribosylaminopyrimidine deaminase activity ; dihydropyrimidine dehydrogenase (NADP+) activity ; hydrolase activity, hydrolyzing N-glycosyl compounds ; NADP binding ; carbohydrate derivative metabolic process ; chloroplast organization ; FAD metabolic process ; response to high light intensity ; riboflavin biosynthetic process" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MNAPLKADDTDLAALMADLATKARAAARVLALAPAEQKNTGLAAMAAALRASAPKLLAANAEDVAEARASGATPAFVDRLALNDARIETMAAGLDVVRGLDDPVGKVTERWTRPNGMTIERVRVPLGVAAVIFESRPNVLADAGALCLKSGNAVILRGGSDSFRSCQAIHACLTQGLREAGLPEAAISLVPTRDRAAVGLLLSGLDGRIDVIVPRGGKSLVARVEAEARVPVFAHLDGNNHVFVDKAASLDMAKTIVLNAKMRRPGICGAAETLLVDKAAAPAQLKPLVGMLIDAGCEVRGDTDVQKADARVTPVTEDDWATEFEAPIIAAKVVGGLDEAIAHIERYGSHHTDAIVTDDATAATRFLNEVDSAIVLHNASTQFADGGEFGFGAEIGIATGKFHARGPVGVEQLTSFKYRVHGTGQTRP", - "output": "cytoplasm ; glutamate-5-semialdehyde dehydrogenase activity ; NADP binding ; L-proline biosynthetic process" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MDKAFDEIIGNSHTDSSSNHKVTRYRRRDLRNELGPRLGFAPSDAASRSKDRLYREREEPPLPKRIRISKIPLDVSDYTLDDMIKEFGSPIFSKIFDNKEDRTCIYEFEDPEVLEKIVERYNGHELHNAKIEVEIYQPQRKHSRMNAHNRRKQTAQEHGRDRPGSHYRQKPNRVSKKNKGREKNNTPTSVEALDAELDAYMKG", - "output": "nucleus ; DNA binding ; RNA binding ; mRNA transport" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MAAKDVKFGDDARQKMLVGVNVLADAVKTTLGPKGRNVVLDKAFGAPTVTKDGVSVAKEIELKDKFENMGAQMVKEVASKASDDAGDGTTTATVLAQAIVNEGLKSVAAGMNPMDLKRGIDKAVAAAVEFVKSSAQPCEDSKSIAQVGTISANSDSHIGDIIAEAMEKVGKEGVITVEEGSGLENELDVVEGMQFDRGYLSPYFITNQDNMSVEHESPFILLVDKKISNIRELLPVLEAVAKAGKPLVIVAEDVEGEALATLVVNNMRGIVKVAACKAPGFGDRRKAMLQDIAILTGGTVISEEVGLDLESATLEHLGQAKRFTMSKENSVIVDGAGSADDIKARVNQIRKQIEETSSEYDAEKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVSLMRAVAAIADLQGENEDQTAGVAIARRAMEAPLRQIVTNAGEEASVVAEKVRGGEGNFGYNAGSGVYGDMLEMGILDPAKVTRTALQAAGSIAGLMITTEAMVADKPEDKAGPAVPDMGGMGGMGGMM", - "output": "cytoplasm ; ATP binding ; ATP-dependent protein folding chaperone ; isomerase activity ; unfolded protein binding ; protein refolding" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MARARGRGRRDLKSEINIVPLLDVLLVLLLIFMATAPIITQSVEVDLPDATESQAVSSNDNPPVIVEVSGIGQYTVVVEKDRLERLPPEQVVAEVSSRFKANPKTVFLIGGAKDVPYDEIIKALNLLHSAGVKSVGLMTQPI", - "output": "plasma membrane ; transmembrane transporter activity ; cell cycle ; cell division ; protein transport" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MSIEHTSHDPSKPDPAKARTLAAALPWLKRYHGKIVVVKYGGNAMTDETLKRAFAEDIAFLRFAGFKPVVVHGGGPQISTMLDRLGIRSEFRGGLRVTTPEAMDVVRMVLVGQVQRELVGLINEHGPLAVGCSGEDAGLFTAEPANTVIDGEEVDLGLVGEVARVRPESVLDLIEAGRIPVVSSVAPDADGQVHNVNADSAAAALAVALGAEKLLVLTDVEGLYLDWPSSDDVIGEISPEALEEILPTLASGMVPKMGACLQAVRNGVPRATVVDGREPHAVLLELFTNEGVGTQVLPGVETKTRKARDTQS", - "output": "cytoplasm ; acetylglutamate kinase activity ; ATP binding ; arginine biosynthetic process via ornithine ; phosphorylation" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MCEEEDSTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDEAGPSIVHRKCF", - "output": "basement membrane ; cell body ; cytoplasm ; cytosol ; extracellular exosome ; extracellular space ; filopodium ; lamellipodium ; motile cilium ; protein-containing complex ; smooth muscle contractile fiber ; stress fiber ; ATP binding ; hydrolase activity ; protein kinase binding ; cellular response to transforming growth factor beta stimulus ; glomerular mesangial cell development ; juxtaglomerular apparatus development ; mesenchyme migration ; positive regulation of ERK1 and ERK2 cascade ; positive regulation of gene expression ; positive regulation of hepatic stellate cell activation ; positive regulation of hepatic stellate cell contraction ; positive regulation of hepatic stellate cell migration ; regulation of blood pressure ; regulation of wound healing ; response to virus ; vascular associated smooth muscle contraction" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MLNTPRICVVVIGKTLEEFLSQLEAAQTAVDFVELRIDYLEQINPNWVRIIKNHTHKKAILCCRARADGGKFLGTPEAQQEILQAGNDLGFDYLDIDLPVANKISIHEKKAKIIISYHNFLHTPPITELNFLLENMRLFNPDVFKFATKSEQYEDVKTLFKLLINKKNNENMIVLGMGEQGKIIRLLSPLLGGYLTFSSINGAISAPGQIDFKTMQDFYQRFYKISSPLKGED", - "output": "3-dehydroquinate dehydratase activity ; 3,4-dihydroxybenzoate biosynthetic process ; amino acid biosynthetic process ; aromatic amino acid family biosynthetic process ; chorismate biosynthetic process" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MKILIINTGSSSLKFAIYQYENSKKIISGIVEKIKSQKSIIKIVNTDGSTTERFEKGIENHQKAIEKMFKILTNSDLKILKTLSEIKIIGHRVVHGGSSLKNSVILNNSILNKLKQISELAPLHNPNAITAIEAVLKILPHAKQVLCFDTSWHQTIKEHAFLYAIPYSWYKNHNIRKYGFHGLSYSYITKRSSEILNKKIDSLNLIILHLGNGASINAVKNGKSYDTSMGITPLEGLAMGTRSGDIDPSIINLMSTILNKTTKQIEEILNKESGILGISEKSNDMRDIWNKIEEGEYQSKLAVEIMTYRIKKYIGSYIAALDFNVDAIVFTGGIGVTDYGIRALALKGFEKIGIELDLEKNEMAQSKYLESEISTINSKLKILAIPTNEESTILEDIYNLIPKNL", - "output": "cytoplasm ; acetate kinase activity ; ATP binding ; magnesium ion binding ; acetyl-CoA biosynthetic process ; organic acid metabolic process ; phosphorylation" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MSGPFPAEPTKGPLAMQPAPKVNLKRTSSLVGPTQSFFMRESKALGAVQIMNGLFHITLGGLLMIPTGVFAPICLSVWYPLWGGIMYIISGSLLAAAAEKTSRKSLVKAKVIMSSLSLFAAISGIILSIMDILNMTLSHFLKMRRLELIQTSKPYVDIYDCEPSNSSEKNSPSTQYCNSIQSVFLGILSAMLISAFFQKLVTAGIVENEWKRMCTRSKSNVVLLSAGEKNEQTIKMKEEIIELSGVSSQPKNEEEIEIIPVQEEEEEEAEINFPAPPQEQESLPVENEIAP", - "output": "cell surface ; external side of plasma membrane ; nucleoplasm ; plasma membrane ; plasma membrane raft ; epidermal growth factor receptor binding ; identical protein binding ; immunoglobulin binding ; B cell activation ; B cell differentiation ; B cell receptor signaling pathway ; calcium ion import into cytosol ; cell surface receptor signaling pathway ; positive regulation of calcium ion import across plasma membrane ; protein tetramerization ; response to bacterium ; store-operated calcium entry" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MTAVASTSGKQDADHNQSIECPRFSRGQKEILLDHEDAKGKDSIINSPVSGRQSISPTLSNATTTTTKSIMNATGTSGAVVSNTPEPGLKRVPAVTFSDLKQQQKQDSLTQLKNDSERTKSPNSNPAPVSNSIPGNHAVIPNHTNTSRTTQLSGSPLVNEMKDYDPKKKDSALKIVDTMKPDKIMATSTPISRENNKVTAKAPTSITLRKEDAQDQANNVSGQINVRSTPEETPVKQSVIPSIIPKRENSKNLDPRLPQDDGKLHVLFGATGSLSVFKIKPMIKKLEEIYGRDRISIQVILTQSATQFFEQRYTKKIIKSSEKLNKMSQYESTPATPVTPTPGQCNMAQVVELPPHIQLWTDQDEWDAWKQRTDPVLHIELRRWADILVVAPLTANTLSKIALGLCDNLLTSVIRAWNPSYPILLAPSMVSSTFNSMMTKKQLQTIKEEMSWVTVFKPSEKVMDINGDIGLGGMMDWNEIVNKIVMKLGGYPKNNEEEDDDEDEEEDDDEEEDTEDKNENNNDDDDDDDDDDDDDDDDDDDDDDDDEDEDEAETPGIIDKHQ", - "output": "chromatin ; CoA-synthesizing protein complex ; cytoplasm ; nucleus ; phosphopantothenoylcysteine decarboxylase complex ; catalytic activity ; FMN binding ; identical protein binding ; protein serine/threonine phosphatase inhibitor activity ; coenzyme A biosynthetic process ; negative regulation of phosphoprotein phosphatase activity ; regulation of mitotic cell cycle ; response to salt stress" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MSGETTRLTEPQLRELAARGAAELDGATATDMLRWTDETFGDIGGAGGGVSGHRGWTTCNYVVASNMADAVLVDLAAKVRPGVPVIFLDTGYHFVETIGTRDAIESVYDVRVLNVTPEHTVAEQDELLGKDLFARNPHECCRLRKVVPLGKTLRGYSAWVTGLRRVDAPTRANAPLVSFDETFKLVKVNPLAAWTDQDVQEYIADNDVLVNPLVREGYPSIGCAPCTAKPAEGADPRSGRWQGLAKTECGLHAS", - "output": "cytoplasm ; 4 iron, 4 sulfur cluster binding ; adenylyl-sulfate reductase (thioredoxin) activity ; metal ion binding ; phosphoadenylyl-sulfate reductase (thioredoxin) activity ; cysteine biosynthetic process ; sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MSTSLAVVRLDRELPMPTRAHDGDAGVDLYSAENVELAPGQRALVSTGIAVAIPHGMVGLVHPRSGLAARVGLSIVNSPGTIDAGYRGEIKVSLINLDPQTPVVISRGDRIAQLLVQRVELPELVEVTSFDEAGLADTTRGDGGHGSSGGHASL", - "output": "dUTP diphosphatase activity ; magnesium ion binding ; dUMP biosynthetic process ; dUTP catabolic process" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MVLLAAAVCTKAGKAIVSRQFVEMTRTRIEGLLAAFPKLMNTGKQHTFVETESVRYVYQPMEKLYMVLITTKNSNILEDLETLRLFSRVIPEYCRALEENEISEHCFDLIFAFDEIVALGYRENVNLAQIRTFTEMDSHEEKVFRAVRETQEREAKAEMRRKAKELQQARRDAERQGKKAPGFGGFGSSAVSGGSTAAMITETIIETDKPKVAPAPARPSGPSKALKLGAKGKEVDNFVDKLKSEGETIMSSSMGKRTSEASKMHAPPINMESVHMKIEEKITLTCGRDGGLQNMELHGMIMLRISDDKYGRIRLHVENEDKKGVQLQTHPNVDKKLFTAESLIGLKNPEKSFPVNSDVGVLKWRLQTTEESFIPLTINCWPSESGNGCDVNIEYELQEDNLELNDVVITIPLPSGVGAPVIGEIDGEYRHDSRRNTLEWCLPVIDAKNKSGSLEFSIAGQPNDFFPVQVSFVSKKNYCNIQVTKVTQVDGNSPVRFSTETTFLVDKYEIL", - "output": "COPI vesicle coat ; Golgi membrane ; protein transport ; retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MTHRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDERAANAIADIKKQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIGRRHKVEAVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVESALHHIKILEDLDFHDIIVSMKASDVNLAIEAYEKAARAFDYPLHLGITESGTLFAGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVARELLKSFGLASNAATLISCPTCGRIEIDLISIANEVEEYISTLQVPIKVAVLGCAVNGPGEAREADIGIAGARGEGLLFRKGQVVRKVPEEIMVEELKKEIDVIAAEMAAEREKEKETQEQ", - "output": "4 iron, 4 sulfur cluster binding ; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity ; iron ion binding ; isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway ; terpenoid biosynthetic process" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MSGPRSASPPGCAATRGGPEHRAAWGEAEARANGHPHAAGGATRGCSKKPGGAVTPQLQQQQQQQQHEQQHEQQQHEQQQHVQQQQRLAKRWRGDDDPPLGGDDPLAGGFGFSFRSRSAWQERGGDDCGRGSRRRRRGAAGGGSSRAPPAGGGGGPAAAGGAEVRPRSVELGLDERRGRGRAEPEPEAEAGAPGGDRGARDGDGPAGPGACCRALLQIFRSKKFPSDKLERLYQRYFFRLNQSSLTMLMAVLVLVCLVMLAFHAARPPLRLPHLAVLAAAVGVILVMAVLCNRAAFHQDHMGLACYALIAVVLAVQVVGLLLPQPRSASEGIWWTVFFIYTIYTLLPVRMRAAVLSGVLLSALHLAIALRANAQDRFLLKQLVSNVLIFSCTNIVGVCTHYPAEVSQRQAFQETRECIQARLHSQRENQQQERLLLSVLPRHVAMEMKADINAKQEDMMFHKIYIQKHDNVSILFADIEGFTSLASQCTAQELVMTLNELFARFDKLAAENHCLRIKILGDCYYCVSGLPEARADHAHCCVEMGMDMIEAISLVREVTGVNVNMRVGIHSGRVHCGVLGLRKWQFDVWSNDVTLANHMEAGGKAGRIHITKATLSYLNGDYEVEPGCGGERNAYLKEHSIETFLILRCTQKRKEEKAMIAKMNRQRTNSIGHNPPHWGAERPFYNHLGGNQVSKEMKRMGFEDPKDKNAQESANPEDEVDEFLGRAIDARSIDRLRSEHVRKFLLTFREPDLEKKYSKQVDDRFGAYVACASLVFLFICFVQITIVPHSVFMLSFYLTCFLLLTLVVFVSVIYSCVKLFPGPLQSLSRKIVRSKTNSTLVGVFTITLVFLSAFVNMFMCNSEDLLGCLADEHNISTSRVNACHVAASAANLSLGDEQGFCGTPWPSCNFPEYFTYSVLLSLLACSVFLQISCIGKLVLMLAIELIYVLVVEVPRVTLFDNADLLVTANAIDFNNNNGTSQCPEHATKVALKVVTPIIISVFVLALYLHAQQVESTARLDFLWKLQATEEKEEMEELQAYNRRLLHNILPKDVAAHFLARERRNDELYYQSCECVAVMFASIANFSEFYVELEANNEGVECLRVLNEIIADFDEIISEDRFRQLEKIKTIGSTYMAASGLNDSTYDKVGKTHIKALADFAMKLMDQMKYINEHSFNNFQMKIGLNIGPVVAGVIGARKPQYDIWGNTVNVASRMDSTGVPDRIQVTTDMYQVLAANTYQLECRGVVKVKGKGEMMTYFLNGGPPLS", - "output": "cilium ; membrane ; plasma membrane ; adenylate cyclase activity ; ATP binding ; metal ion binding ; adenylate cyclase-activating G protein-coupled receptor signaling pathway ; adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway ; cAMP biosynthetic process ; cellular response to forskolin ; intracellular signal transduction ; positive regulation of cytosolic calcium ion concentration ; regulation of insulin secretion involved in cellular response to glucose stimulus" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MSKIEEKLFQDRYRVDSGRPHIRIKDPDHCTELSEKQCTVCCPAGCYTRETNGKVTLVTDGCLECGTCRIICQDSGNLEWEWPRGGFGILFKFG", - "output": "iron ion binding ; iron-sulfur cluster binding ; nitrogen fixation" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MSEMTPREIVHELNRHIIGQDNAKRSVAIALRNRWRRMQLEESLRVEVSPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEVETIIRDLTDVAIKMTHQQAMEKVQYRAEEQAEERILDALLPPARDAWGQNEQSTEDTTSSNTRQIFRKKLREGKLDDKEIEVDVAAPQMGVEIMSPPGMEEMTNQLQGMFQNLAGDTKKKRKMKIKDAFKALTEEEAAKLVNQEELKESAIFNAENNGIVFIDEIDKICKRGDSSGPDVSREGVQRDLLPLIEGSTVSTKHGMVKTDHILFITSGAFQVAKPSDLIPELQGRLPIRVELEALSAHDFKRILTEPKASLTEQYIALMKTEDVGIEFTEDGINQIADAAWRVNETTENIGARRLHTVMERLMDEISFDATDRAGSKLVIDEAYVISKLGELVEDEDLSRFIL", - "output": "HslUV protease complex ; ATP binding ; ATP hydrolysis activity ; peptidase activity ; proteasome-activating activity ; protein unfolding" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MFQAFPGDYDSGSRCSSSPSAESQYLSSVDSFGSPPTAAASQECAGLGEMPGSFVPTVTAITTSQDLQWLVQPTLISSMAQSQGQPLASQPPAVDPYDMPGTSYSTPGLSAYSTGGASGSGGPSTSTTTSGPVSARPARARPRRPREETLTPEEEEKRRVRRERNKLAAAKCRNRRRELTDRLQAETDQLEEEKAELESEIAELQKEKERLEFVLVAHKPGCKIPYEEGPGPGPLAEVRDLPGSTSAKEDGFGWLLPPPPPPPLPFQSSRDAPPNLTASLFTHSEVQVLGDPFPVVSPSYTSSFVLTCPEVSAFAGAQRTSGSEQPSDPLNSPSLLAL", - "output": "intracellular membrane-bounded organelle ; nucleoplasm ; nucleus ; DNA binding ; DNA-binding transcription activator activity, RNA polymerase II-specific ; DNA-binding transcription factor activity ; DNA-binding transcription factor activity, RNA polymerase II-specific ; double-stranded DNA binding ; RNA polymerase II cis-regulatory region sequence-specific DNA binding ; sequence-specific DNA binding ; sequence-specific double-stranded DNA binding ; cellular response to calcium ion ; cellular response to hormone stimulus ; female pregnancy ; positive regulation of transcription by RNA polymerase II ; regulation of transcription by RNA polymerase II ; response to cAMP ; response to corticosterone ; response to mechanical stimulus ; response to morphine ; response to progesterone ; response to xenobiotic stimulus ; transcription by RNA polymerase II" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MSEKENNFPPLPKFIPVKPCFYQNFSDEIPVEHQVLVKRIYRLWMFYCATLGVNLIACLAWWIGGGSGTNFGLAFVWLLLFTPCGYVCWFRPVYKAFRADSSFNFMAFFFIFGAQFVLTVIQAIGFSGWGACGWLSAIGFFQYSPGAAVVMLLPAIMFSVSAAMMAIAIMKVHRIYRGAGGSFQKAQTEWNTGTWRNPPSREAQYNNFSGNSLPEYPTVPSYPGSGQWP", - "output": "recycling endosome membrane ; trans-Golgi network membrane ; protein transport" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MEPMSVKEDLRLFQSTLLQDGLKELLKENKFVDCILKVGDRSLPCHRLIMAACSPYFRELYFTEDGTEKKDANKEVVLENVDPNIMDMIVNYLYSADIDITDDNVQDVFAVANKFQIPSVFTVCVNYLQNKLSLGNCLAIFRMGLVLNCPRLAVSARDFIAEHFETLSKDEEFLEFNAPEFFAIIGCDALNVEKEELVFELLMKWVRKNKENRAKALGDAFEHIRFRLLPEKYLKEKVEKDDIIKADPELIKKLKVIKDAFAGKLPQIKEGEKEGEGENELPGFLNDSQRLGMFNRDLILMINDTAAVAYDANENECFLAAMAEQIPRNHVSITSKKNLLYVAGGLFVDEENKDSPLQCYFYQMDPHSPNWIALPPMPSPRCLFAMGEFENLLFAVAGKDLQSNESLDSVLCYDVDKMKWLETKKLPLRIHGHSVISQNGLVYCIGGKTDENKTINKMFAYNHKKSEWKELAAMKTPRSMFGATVHKGKIVVVGGVNEDGLLSSCEAYDFGTNKWEVFAEFAQERSSVNVLSVDGVLYAVAGFTIKENEDKQCVPSEITDIWQYEEDKKQWSGMIGEMRYASGASCVSMRLNVAKMPKL", - "output": "cytoskeleton ; sarcoplasmic reticulum membrane ; sarcomere organization ; skeletal muscle fiber development" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MVNVFVDGLSVEVKKGATILQACAQVGIEIPRFCYHERLSIAGNCRMCLVEVEKSPKPVASCAMPVMDNMKIFTNTPLVKKAREGVLEFLLVNHPLDCPICDQGGECDLQDLTMVYGSDRGRFHEYKRGVEDKNIGPLVKTVMTRCIHCTRCVRFATEVAGVPDLGTVGRGRDTEISTYIQKVFNSELSGNVIDLCPVGALTSKPYAFTARSWELQSTESIDVSDAIGSNIRIDVRGSEIMRILPRLNEDVNEEWISDKARFCYDGLKRQRLNNPIIKENGQYKTVTWEKAFNFILKNLQEIQNSNRIVGVVGNLMDVESILLFKELLNKLGSSKIYLESSTPILQLNDDEKEDQILNNADFRNNYISNTPLAKIEESDLCLLIGTNIRLEAPLLNTRIRKRYLQGNYSVYSVGPTNNLTYNTENLGNDISTLLEISEGRHPFCKKLMKSKKPLIIIGTHVLQRTDGTSIIELVKTLFKYTQIKTSNWNGFNILHTSASSVGALDLGIGSTKRYSEKISNSKIEKHFIYLLGADEIRIENSKEHFIVYQGHHGDYGANIADVILPGSAYTEKTATYVNVEGRVQNTKSAFYAPGNAREDWKIIRALSEVLNKKLPYDSFEDIHTRFMSIAPHLLKVNAIEKNKIVIENSLPFKGLIKNIGFKPLFNNFYLTNAICRSSQTMAKCSSIYKLN", - "output": "mitochondrial inner membrane ; respirasome ; 2 iron, 2 sulfur cluster binding ; 4 iron, 4 sulfur cluster binding ; metal ion binding ; NADH dehydrogenase (ubiquinone) activity ; ATP synthesis coupled electron transport" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MNSTWDGNQSSHPFCLLALGYLETVRFCLLEVLIIVFLTVLIISGNIIVIFVFHCAPLLNHHSTSYFIQTMAYADLLVGVSCLVPSLSLLYYPLPIEEAMTCQVFGFVVSVLKSISMASLACISIDRYIAITKPLTYNTLVTPWRLRLCIFLIWLYSTLVFLPSFFHWGKPGYHGDVFQWCAESWHTNSYFTLFIVMMLYAPAALIVCFTYFNIFRICQQHTKEISERQARFSSQNGETGEPQTCPDKRYAMVLFRITSVFYVLWLPYIIYFLLESSTGCSSRLASFLTTWLAISNSFCNCIIYSLSNSVFQRGLKGLSGSLCTSCASHTTAKDPYTVRCKGPPNGSHI", - "output": "plasma membrane ; G protein-coupled receptor activity ; glucose homeostasis ; insulin receptor signaling pathway ; negative regulation of insulin receptor signaling pathway ; positive regulation of multicellular organism growth" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MPQSPEQPDVSSTVSYNRVMLKISGEALMGTQGFGLHPPTVRRIAEEVKSVHDLGVEICMVIGGGNIFRGLSGSAQGMERTTADYMGMLATVMNALGMQSALEDLGVFTRVISAIRMDEVAEPYIRRRAVRHLEKKRVCIFAAGTGNPYFTTDTAATLRANEMNCEAIFMGKNGVDGVYDKDPKTNEDAKRYDSVSYDDVLAKRLKVMDASAIALARDNNLPLIVFGLDEPGGFRGVLAGEGTYTKVHG", - "output": "cytoplasm ; ATP binding ; UMP kinase activity ; 'de novo' CTP biosynthetic process ; phosphorylation" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MTQKTILNDTHRALGAKMVDFGGWDMPIHYGSQIDEHHQVRRDAGMFDVSHMTVVDLHGVRVREFLRYLLANSVDKLKVSGKALYTCMLNPQGGVIDDLIVYFMQEEFFRLVVNAATRDKDLQWIGEQAARFEVRVKERADFAMIAVQGPNARSKVIDLLDPADASAASKLGRFAALQTRTRDGVALFLARTGYTGEDGFEIVLPQADAVAFWNALLAHGVAPAGLGARDTLRLEAGMNLYGQDMDDNVTPYEAALAWTITLDEGRDFIGRSVLESQKAQGAPRQMIGVVMDEKGVLRHGQKVLSAGGEGEILSGTFSPTLGKAIAFARVPAGSIDDLRVDIRGKQVPLRAVKFPFVRDGQAQPGVLGA", - "output": "cytosol ; aminomethyltransferase activity ; transaminase activity ; glycine decarboxylation via glycine cleavage system" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MPADHIPALALAGPTASGKTAAAFAIADALAPRLPVEIISVDSALVYSGMDIGTAKPTPAEQARVPHHLIDIRDPLQAYSAAEFVQDATRLIGEIRARGALPLLVGGTMLYFKALFDGIDDMPPADAAVRARLEAQAAAIGWSGMHAELARVDPPTAARLAPGDSQRIQRALEVWHVSGRPLSSFHTTKTVAASARPMSAASLFSLEPHDRAWLHGRIAERFHAMLAAGFLDEVLRLRARGDLHADLPSMRCVGYRQAWESLDGLYPMSSLPERGIAATRQLAKRQITWLRSMPERHSIACDAPDATAQLVQAVRARVWGGGA", - "output": "ATP binding ; tRNA dimethylallyltransferase activity ; tRNA processing" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MTFPVEKVRADFPILQREVNGLPLAYLDSAASAQKPNQVIDAESAFYRHGYAAVHRGIHTLSAQATESMENVRKQASRFINARSAEELVFVRGTTEGINLVANSWGTENIRAGDNIIISEMEHHANIVPWQMLCERKGAELRVIPLHPDGTLRLETLAALFDDRTRLLAITHVSNVLGTENPLPDMIALARQHGAKVLVDGAQAVMHHAVDVQALDCDFYVFSGHKLYGPTGIGILYVKEALLQEMPPWEGGGSMISTVSLTQGTTWAKAPWRFEAGTPNTGGIIGLGAAIDYVTSLGLDKIGDYEQMLMRYALEQLAQVPDITLYGPAQRLGVIAFNLGKHHAYDVGSFLDNYGIAVRTGHHCAMPLMAWYGVPAMCRASLAMYNTHEEVDRLVAGLTRIHRLLG", - "output": "cytoplasm ; cysteine desulfurase activity ; pyridoxal phosphate binding ; selenocysteine lyase activity ; cysteine metabolic process" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MKIGIIGAMEPEVAHLVESMENPSSTTIAGIEFVAGQLAGKDVVVTRSGIGKVTASIATTLLIEKYAPDAIINTGSAGGFADELAIGDIVISSEVRHHDVDVTAFGYEIGQMAQQPAAFIPDTALVTAAQKAVASLGEVKAIEGLICTGDSFICDPVRTKTMLEHFPTMAACEMEGAAIAQVCHQFDVPFVVIRSLSDNANNDSPVDFDEYLVKAGHHSALMVIALLEQL", - "output": "adenosylhomocysteine nucleosidase activity ; methylthioadenosine nucleosidase activity ; L-methionine salvage from methylthioadenosine ; L-methionine salvage from S-adenosylmethionine ; nucleoside catabolic process" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MKRKVKKMAAMATSIIMAIMIILHSIPVLAGRIIYDNETGTHGGYDYELWKDYGNTIMELNDGGTFSCQWSNIGNALFRKGRKFNSDKTYQELGDIVVEYGCDYNPNGNSYLCVYGWTRNPLVEYYIVESWGSWRPPGATPKGTITVDGGTYEIYETTRVNQPSIDGTATFQQYWSVRTSKRTSGTISVTEHFKQWERMGMRMGKMYEVALTVEGYQSSGYANVYKNEIRIGANPTPAPSQSPIRRDAFSIIEAEEYNSTNSSTLQVIGTPNNGRGIGYIENGNTVTYSNIDFGSGATGFSATVATEVNTSIQIRSDSPTGTLLGTLYVSSTGSWNTYQTVSTNISKITGVHDIVLVFSGPVNVDNFIFSRSSPVPAPGDNTRDAYSIIQAEDYDSSYGPNLQIFSLPGGGSAIGYIENGYSTTYNNVNFANGLSSITARVATQISTSIQVRAGGATGTLLGTIYVPSTNSWDSYQNVTANLSNITGVHDITLVFSGPVNVDYFVFTPANVNSGPTSPVGGTRSAFSNIQAEDYDSSYGPNLQIFSLPGGGSAIGYIENGYSTTYKNIDFGDGATSVTARVATQNATTIQVRLGSPSGTLLGTIYVGSTGSFDTYRDVSATISNTAGVKDIVLVFSGPVNVDWFVFSKSGT", - "output": "extracellular region ; carbohydrate binding ; endo-1,4-beta-xylanase activity ; metal ion binding ; cellulose catabolic process ; xylan catabolic process" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MAAITAGLVKELRDKTGAGMMDCKAALTENNGDIEAAIDWLRKKGLAKAAKKAGRVAAEGLVAVESSGHYAAAIEVNAETDFVARNADFQAFVREAAKVALNTDGSIEAVAAAHFPGESVTVADKLATLIATIGENMTLRRSVRLTVSAGVIATYVHGAVSEGQGRIGVLVALESQGDVEKLSTLGRQIAMHVAALNPLALDASGIDEATIAREKAILLEKHQGKPANVQEKIAESGMKTYFKEVTLLEQPFVHDGSKSVAQVLKENEGSVGAPITLKGFVRYALGEGIEKEESDFAAEVAAAAGQS", - "output": "cytoplasm ; translation elongation factor activity" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MPITRAEKEAIIQELKEKFKEARVAVLADYRGLNVAEATRLRRRLREAGCEFKVAKNTLTGLAARQAGLEGLDPYLEGPIAIAFGVDPVAPAKVLSDFIRETRKMEIKAGVLEGTIIDARRVRDLADLPPREVLLARVLGGMQAPLYGFAGALQGTLRKFIYALEAIRKQKAGEA", - "output": "large ribosomal subunit ; large ribosomal subunit rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MAPKGSQRVVKKIVAENRKARFNYEIIDTYEAGIVLMGTEVKSLREGKANIAESYASDEDGEIWLINSYLPEYLQANRFNHEPRRRRKLLLSGREIGRLRSGINREGMTLIPLKIYFNDNGRAKLELALAKGKKLHDKRQSEKERDWNRQKGRILKDNR", - "output": "cytoplasm ; RNA binding ; trans-translation" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MELVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEMLA", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MAKFKLSLVQFLVSPVKSDNLNRACKLIKEAAQKGAQIVALPECFNSPYGTTYFPEYAEKIPGESTELLSQVAKECGIYLIGGSIPEEDCGKLYNTCAVFGPDGTLLVKHRKIHLFDIDVPGKIRFQESETLSPGDSFSVFDTPYCKVGVGICYDIRFAELAQIYANKGCQLLVYPGAFNMTTGPAHWELLQRARALDNQVYVATASPARDEKASYVAWGHSTIVSPWGEVVAKAGSEETVLSAEIDLQYLAEIREQIPIRRQRRRDLYNVEEKRN", - "output": "cytoplasm ; 2-oxoglutaramate amidase activity ; omega-amidase activity ; nitrogen compound metabolic process" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MMKRKILAAVIPALLAAATANAAEIYNKDGNKLDLYGKAVGRHVWTTTGDSKNADQTYAQIGFKGETQINTDLTGFGQWEYRTKADRAEGEQQNSNLVRLAFAGLKYAEVGSIDYGRNYGIVYDVESYTDMAPYFSGETWGGAYTDNYMTSRAGGLLTYRNSDFFGLVDGLSFGIQYQGKNQDNHSINSQNGDGVGYTMAYEFDGFGVTAAYSNSKRTNDQQDRDGNGDRAESWAVGAKYDANNVYLAAVYAETRNMSIVENTVTDTVEMANKTQNLEVVAQYQFDFGLRPAISYVQSKGKQLNGADGSADLAKYIQAGATYYFNKNMNVWVDYRFNLLDENDYSSSYVGTDDQAAVGITYQF", - "output": "cell outer membrane ; pore complex ; porin activity ; monoatomic ion transmembrane transport" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MAAASAVSVLLVAAERNRWHRLPSLLLPPRTWVWRQRTMKYTTATGRNITKVLIANRGEIACRVMRTAKKLGVQTVAVYSEADRNSMHVDMADEAYSIGPAPSQQSYLSMEKIIQVAKTSAAQAIHPGCGFLSENMEFAELCKQEGIIFIGPPPSAIRDMGIKSTSKSIMAAAGVPVVEGYHGEDQSDQCLKEHARRIGYPVMIKAVRGGGGKGMRIVRSEQEFQEQLESARREAKKSFNDDAMLIEKFVDTPRHVEVQVFGDHHGNAVYLFERDCSVQRRHQKIIEEAPAPGIKSEVRKKLGEAAVRAAKAVNYVGAGTVEFIMDSKHNFCFMEMNTRLQVEHPVTEMITGTDLVEWQLRIAAGEKIPLSQEEITLQGHAFEARIYAEDPSNNFMPVAGPLVHLSTPRADPSTRIETGVRQGDEVSVHYDPMIAKLVVWAADRQAALTKLRYSLRQYNIVGLHTNIDFLLNLSGHPEFEAGNVHTDFIPQHHKQLLLSRKAAAKESLCQAALGLILKEKAMTDTFTLQAHDQFSPFSSSSGRRLNISYTRNMTLKDGKNNVAIAVTYNHDGSYSMQIEDKTFQVLGNLYSEGDCTYLKCSVNGVASKAKLIILENTIYLFSKEGSIEIDIPVPKYLSSVSSQETQGGPLAPMTGTIEKVFVKAGDKVKAGDSLMVMIAMKMEHTIKSPKDGTVKKVFYREGAQANRHTPLVEFEEEESDKRESE", - "output": "3-methylcrotonyl-CoA carboxylase complex, mitochondrial ; cytosol ; methylcrotonoyl-CoA carboxylase complex ; mitochondrial matrix ; mitochondrion ; ATP binding ; biotin binding ; biotin carboxylase activity ; metal ion binding ; methylcrotonoyl-CoA carboxylase activity ; biotin metabolic process ; branched-chain amino acid catabolic process ; leucine catabolic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MSARIVVSGTDTGVGKTVFSAALAGALDGYYWKPVQSGLDEETDSQTVMRLSGLGAERVWPEAYRLRTPVSPHLAAELDGVTIDHRALEAPHTDRPLVIEGAGGLLVPLTRDVTYLDLMARWRLPVVLCARTALGTINHSLLSIEALRARDVAILGVSFIGEENVETEGIIIDMGRVKRLGRLSYVTPLTRATLRQAFADGFDIGDFVKERAR", - "output": "cytoplasm ; ATP binding ; dethiobiotin synthase activity ; magnesium ion binding ; biotin biosynthetic process" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MSFGTLYTHNPTPRSTTLIALAKLHNLDVKIIHAEKKNKEAFEELCRYNPLGQVPTFVGADGFVLSECIPLTLYCNDERSSLRILQWMSFANSDLFPAVGGVFLPRIGQRQIIQQDDGDSLRAMLQRCKYLDEHLKRSRYLVGESITIADFFAASLLMGAFAAFRRSMQERFGALCSWYDGVLEIGWFKKVAGGVPDLGLELEIPEDIKW", - "output": "cytoplasm ; nucleus ; transferase activity" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MIKLAIDGMGGDNAPKEIVEGSILALKQFDDIELTIFGDVDKMKPYLIEHPRLKVVHTPKYFEMGVKDIGRHTLRDDKDTSMLMAINHVKEGLADGVVSSGPTQALIFASFFMIRPMKEMKRVAIAPMVPTVIGKPTILLDAGGNIDAKAEHLLDFAIFSTIALKEVYGVKSPKVGLINIGTEPGKGRDIDKETFELLSKHPLIDFYGNLEPKEILTSDAQILLSDGFTANIVMKTMEGTASALGKILKREIKASFWGKLAAVLFLKKPLKRFKQSMSADEVGGALIAGLDKVVVKAHGSSEAYAFMNAIRQAKTMVSHDVIGKVKNVLRGQDE", - "output": "cytoplasm ; phosphate:acyl- acyltransferase activity ; fatty acid biosynthetic process ; phospholipid biosynthetic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MWRVCARRARSAVPRDGFRARWAALKEGPGAPCGSPRIGPAAVRCGSGIPRYGVRSLCGWSSGSGTVPRNRLLRQLLGSPSRRSYSLPPHQKVPLPSLSPTMQAGTIARWEKKEGEKISEGDLIAEVETDKATVGFESLEECYMAKILVPEGTRDVPVGSIICITVEKPQDIEAFKNYTLDLAAAAAPQAAPAAAPAPAAAPAAPSASAPGSSYPTHMQIVLPALSPTMTMGTVQRWEKKVGEKLSEGDLLAEIETDKATIGFEVQEEGYLAKILVPEGTRDVPLGAPLCIIVEKQEDIAAFADYRPTEVTSLKPQAAPPAPPPVAAVPPTPQPVAPTPSAAPAGPKGRVFVSPLAKKLAAEKGIDLTQVKGTGPEGRIIKKDIDSFVPSKAAPAAAAAMAPPGPRVAPAPAGVFTDIPISNIRRVIAQRLMQSKQTIPHYYLSVDVNMGEVLLVRKELNKMLEGKGKISVNDFIIKASALACLKVPEANSSWMDTVIRQNHVVDVSVAVSTPAGLITPIVFNAHIKGLETIASDVVSLASKAREGKLQPHEFQGGTFTISNLGMFGIKNFSAIINPPQACILAIGASEDKLIPADNEKGFDVASVMSVTLSCDHRVVDGAVGAQWLAEFKKYLEKPITMLL", - "output": "acetyltransferase complex ; dihydrolipoyl dehydrogenase complex ; intracellular membrane-bounded organelle ; mitochondrial matrix ; mitochondrial pyruvate dehydrogenase complex ; mitochondrion ; myelin sheath ; pyruvate dehydrogenase complex ; acetyltransferase activity ; dihydrolipoyllysine-residue acetyltransferase activity ; identical protein binding ; pyruvate dehydrogenase (NAD+) activity ; acetyl-CoA biosynthetic process from pyruvate ; glucose metabolic process ; tricarboxylic acid cycle" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MPLLSQMQDQSGTTFAQLEALRQKLREYEYYYHVLDNPLVPDAEYDRLMNELKNLEWQHPEWITADSPTQRVGAKPLDGFAQVTHEIPMLSLDNAFSDEELDGFLRRMESYITEDPHTLAFCCEPKLDGLAVSILYVDGVLSQAATRGDGTTGEDITSNIRTVRNIPLKLNMDNPPARLEVRGEVFMPQKGFETLNERALEKGEKTFANPRNAAAGSLRQLDPKITRQRPLVLNAYGIGVYESDDELPATHFERLQWLKSIGIPVNNEIRLATGREQLLAFYADIQAKRPTLGYDIDGTVLKVNDIGLQEQLGFISRSPRWAIAYKFPAQEEMTVLNDVEFQVGRTGAITPVAKLEPVFVAGVTVSNATLHNGDEIERLGIVIGDTVIIRRAGDVIPQIVGVVMERRPENAKKIEFPTACPVCESAVVRVEGEAVARCTGGLFCGAQRKEALKHFVSRKAMDIDGVGEKLIEQLMERELVHTPADLFKLEHTTLMRLERMGGKSAQNALNSIEKAKNTTLARFLFALGIRDVGEATAQNLANHFHNLDAIRAATFEQLQEVQDVGEVVANRIVRFWQEPHNVTVVEDLISQGIHWQDVVQVEIADNPLKGKSVVLTGTLTQLTRDQAKALLQSFGCKVSGSVSSKTDYLIAGEKAGSKLAKAQELGVKVLTEQEFIALTGEN", - "output": "DNA binding ; DNA ligase (NAD+) activity ; metal ion binding ; DNA repair ; DNA replication" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MTMITIDYIKDIIKRSDKLSEEIDPDQTPYKSKYEAIELLVKELKKEINENEKELNQQQQQDILDYLVVIDSKLGELFIATEEITLGLNICRDCLKSLESIKNKFPLETISTFQSIAIIDINKNHFENGKQLLIKSENLINQTIEKQQEQEQEQEQQFKDKLESLQLQNYFYFAQLYGLLKDSELSSKYCELTLRKQLKRNNFDRLEWCKNSLMLAEYYLSELNFDYAKQCFLVSNYICKGIENEDDREETQANIYLVMAKFYLEFLHFFRDIENLNHCHRVNNNNKNNNNENDIDFVQGGLSSISLSDKQKEKEKEDKLFNENQIKKEKMLDLISFNKRSLNIDKPLFTELGSELLDKIYNHSTFTSPIDLIVVKDQPSARDIFLKSQHFFNKSKKYYKLDGFVSQHIKILFDQINLFEYLNMFESNAGRKIGIHKKKIELIQPLLKELNPTYFLSSIRSIYFKIAEIYSEISKIYQCVCTNLREIQTYNECLFKSMEYYNLFLNSYNDGEVPNSPKITEEEKMKSIIEDFEVYINAKLELAVCHKNVKGVNKLVLEHLEKSLNLFRSIITLLDSVPKDISSRHTQEYHLCSQMSSLLPQKIQFLSSNKTPNPGQWYGK", - "output": "cytoskeleton ; mitochondrion ; mitochondrial transport" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MPIDQEKLAKLQKLSANNKVGGTRRKLNKKAGSSAGANKDDTKLQSQLAKLHAVTIDNVAEANFFKDDGKVMHFNKVGVQVAAQHNTSVFYGLPQEKNLQDLFPGIISQLGPEAIQALSQLAAQMEKHEAKAPADAEKKDEAIPELVEGQTFDADVE", - "output": "cytoplasm ; cytosol ; nascent polypeptide-associated complex ; nucleus ; polysomal ribosome ; unfolded protein binding ; 'de novo' cotranslational protein folding ; macroautophagy ; post-translational protein targeting to endoplasmic reticulum membrane" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MSDIRLDSATFFKRAAKIFDSWEKPSGDTQALEDINSIAIILGDPNDEVASYTKTTALQLWLLGYEFPSTLMVFEKSPRKVTFVCGSSKAKLIRQLQPSDGIEIDVKVRSKDATAAKETMEEVVASLNGKFGSLPKDRPIGKLVDEWNSAVESKGDLEVVDVAIPISAVLAEKDGEELKTIITSAKLTSTVMINYFKSKMESIIDRGTKMSHEALAQLVEEKIGNEEKGPDMKLWNKNPSLGEIDFASSEFVYSPVIQSGGKYDLKVTAASNNDNLKPGIILANMGIRYKNYCSNMGRTFLISPSKKQETQYTTLLEVRKEALALLKTGAVASDVYNSVHQSLETKNATLADSFLKNLGFATGMEYRDSSFLLNAKNNRELKENMVLVLTIGVADLPDAKNKGKTYSLLLSDTVKIGQNGAVVLTEGCTRLSDVVMDMEEEEEEDVKPQIDKKPKINNSPKKPRSSTVGGRVLNAKTRGANREQATQTTAEKIKTNQQRLHAQLNADGVKRWEADAGGKNGAQQKVVKRYESYRREEQLPRAVEDRRIYVDEQRQSVVLPINGYAVPYHISTIKNVTKTEESNHMVLRINFQSPGQIAGKKEDMPFEDPDANFIRSVSFRSQDQRHMLKVYEAITALKKAAVKRETERKELADVIEQEKLIEVKGRHPYVLKNVFPRPGPEGKKTDGNVEIHQNGIRFRPDGPASKIDILFSNIKHLFFQPSEKELIVIIHVHLKAPIMLGKKKTSDVQFYREVADMSFDETGGKKRRARYGDEDEIEQEQEDRKRRAELDKLFHDFARRIETAAQAQQFELEVDVPFRELGFNGVPHKSIVALLPTTNCLIHISELPFTVITLSEVEIVHLERVQFGLKNFDMVFVLQDLKKPPVHINSIPVAHLDNVKEWLDSCDVPISEGPVNLSWPAIMKTVNEDPHAFYAEGGWNFLTGSGSDDGSEESEEGSEFEGDSDVFDESSGSDEDSESAFEGDSDSASAESLSDEGEDWDELERKAKRADEKHRTDRGGDSDDDGKKKKKGSRR", - "output": "FACT complex ; replication fork protection complex ; histone binding ; nucleosome binding ; protein carrier chaperone ; constitutive heterochromatin formation ; DNA repair ; DNA-templated DNA replication ; nucleosome assembly ; positive regulation of RNA polymerase II transcription preinitiation complex assembly ; regulation of sister chromatid cohesion ; transcription elongation by RNA polymerase II" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MVHHGQMHAQPGVGLRPDTPVASGQLPSTSIRSRRSGISKAQRETWERLWPELGLLALPQSPRGTPVDTRAWFGRDAPVVLEIGSGSGTSTLAMAKAEPHVDVIAVDVYRRGLAQLLCAIDKVGSDGINIRLILGNAVDVLQHLIAPDSLCGVRVFFPDPWPKARHHKRRLLQPATMALIADRLVPSGVLHAATDHPGYAEHIAAAGDAEPRLVRVDPDTELLPISVVRPATKYERKAQLGGGAVIELLWKKHGCSERDLKIR", - "output": "tRNA methyltransferase complex ; tRNA (guanine-N7-)-methyltransferase activity ; RNA (guanine-N7)-methylation ; tRNA methylation" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MGQNDLMGTAEDFADQFLRVTKQYLPHVARLCLISTFLEDGIRMWFQWSEQRDYIDTTWNCGYLLASSFVFLNLLGQLTGCILVLSRNFVQYACFGLFGIIALQTIAYSILWDLKFLMRNLALGGGLLLLLAESRSEGKSMFAGVPTMRESSPKQYMQLGGRVLLVLMFMTLLHFDASFFSILQNIVGTALMILVAIGFKTKLAALTLVVWLFAINVYFNAFWTIPVYKPMHDFLKYDFFQTMSVIGGLLLVVALGPGGVSMDEKKKEW", - "output": "cytosol ; endoplasmic reticulum ; endoplasmic reticulum membrane ; endoplasmic reticulum-Golgi intermediate compartment ; endoplasmic reticulum-Golgi intermediate compartment membrane ; Golgi membrane ; nuclear membrane ; cargo receptor activity ; Golgi organization ; lipid homeostasis ; lipoprotein transport ; positive regulation of organelle organization ; regulation of lipid transport" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MAISWAAATTSKLAYPPHVHFSPSPSSNYLFLKTHKPSATHLSSSFIHPTTILHLAAANTTTRRRSFTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALASLGNSAPKKYDEIDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNIVVFLNKQDQVDDEELLQLVELEVRELLSKYEFPGDDVPIISGSALLSLEALMANPSIKRGENQWVDKIYELMEAVDDYIPIPQRQTELPFLLAIEDVFTITGRGTVATGRVERGTIRVGETVDIVGVKDTRNTTVTGVEMFQKILDEALAGDNVGLLLRGIQKTDIQRGMVLAKPGTITPHTKFSAIVYVLKKEEGGRHSPFFSGYRPQFYMRTTDVTGKVTEIMNDKDEESKMVMPGDRVKLVVELIVPVACEQGMRFAIREGGKTVGAGVIQSIIE", - "output": "chloroplast ; mitochondrion ; GTP binding ; GTPase activity ; translation elongation factor activity ; mitochondrial translational elongation" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MTTLACRKLAPHPESPRHQHAGPWLVWLHGLLGSGQDWLPVAQLCGDYPSLLIDLPGHGQSVSLSADGFADISRQLSQTLQANGIREYWLAGYSLGGRIAIYHACYGRHHGLQGLLVEGGNLGLENAELRQARLQQDRQWAQRFRQEPLPQVLDDWYQQAVFADLDPQQREQLVLLRADNHGPAVAEMLEATSLGHQPWLLPALQRLNVPYTYLCGDRDHKFLQLAQQYRLPLHTLARAGHNAHRANPGAFAAQVLAFLSQSSCLPPSSLSR", - "output": "2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase activity ; menaquinone biosynthetic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MAHQAHAYHMVDPSPWPLTGAIGALFLTSGLAIWFHFQSVTLLTLGLILLLLTMYQWWRDIIREGTFQGHHTPPVQKGLRYGMILFITSEVFFFLGFFWAFYHSSLAPTPELGGCWPPTGITPLDPFEVPLLNTAVLLASGVTVTWAHHSLMEGARKQAIQALALTIILGVYFTALQAMEYYEAPFTIADGVYGSTFFVATGFHGLHVIIGSSFLAVCLLRQIQYHFTSEHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS", - "output": "mitochondrial inner membrane ; respiratory chain complex IV ; cytochrome-c oxidase activity ; aerobic electron transport chain" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MKNVNPTHTLAWKALEDHFAVMKDTEMKTLFSQDPSRFNTFSRTFSDQILVDFSKNRITQETLDKLQALAKECDVAGAIKSMFSGEKINCTEDRAVLHTALRNRSNTPVMVDGKDVMPEVNAVLHKMKVFSERVISGEWKGYTGKAITDVVNIGIGGSDLGPYMVTEALRPYKNHLTMHFVSNVDGTHIAETLKKCDPETTLFLIASKTFTTQETMTNAHSARDWFLSAAKESAFVAKHFVALSTNSAEVEKFGIDTANMFEFWDWVGGRYSLWSAIGLSIVLSIGYDNFEQLLSGAHAMDNHFRTTEAENNIPMILALIGIWYNNFFGTETEAILPYDQYMHRFAAYFQQGNMESNGKYIDRDGNKVSYQTGPIIWGEPGTNGQHAFYQLIHQGTKLIPCDFIAPAISHNPLSDHHAKLMSNFFAQTEALAFGKTREQVDAEFASAGKDPATMGYVAPFKVFEGNRPTNSILLKEITPYSLGALIAMYEHKIFVQGVIFNIFTFDQWGVELGKQLANRILPELKGKESVNSHDSSTNNLINRYKAWR", - "output": "cytoplasm ; carbohydrate derivative binding ; glucose-6-phosphate isomerase activity ; carbohydrate derivative metabolic process ; gluconeogenesis ; glycolytic process" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MKGQQKTAETEEGTVQIQEGAVATGEDPTSVAIASIQSAATFPDPNVKYVFRTENGGQVMYRVIQVSEGQLDGQTEGTGAISGYPATQSMTQAVIQGAFTSDDAVDTEGTAAETHYTYFPSTAVGDGAGGTTSGSTAAVVTTQGSEALLGQATPPGTGQFFVMMSPQEVLQGGSQRSIAPRTHPYSPKSEAPRTTRDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGILSKACDYIQELRQSNHRLSEELQGLDQLQLDNDVLRQQVEDLKNKNLLLRAQLRHHGLEVVIKNDSN", - "output": "chromatin ; Golgi apparatus ; nucleoplasm ; nucleus ; transcription regulator complex ; bHLH transcription factor binding ; DNA-binding transcription factor activity, RNA polymerase II-specific ; enzyme binding ; histone deacetylase binding ; identical protein binding ; protein heterodimerization activity ; protein homodimerization activity ; protein kinase binding ; protein-containing complex binding ; RNA polymerase II cis-regulatory region sequence-specific DNA binding ; sequence-specific DNA binding ; sequence-specific double-stranded DNA binding ; carbon catabolite regulation of transcription ; cellular response to insulin stimulus ; glucose homeostasis ; late viral transcription ; lipid homeostasis ; negative regulation of fibrinolysis ; positive regulation of transcription by RNA polymerase II ; positive regulation of transcription from RNA polymerase II promoter by glucose ; regulation of transcription by RNA polymerase II ; regulation of transcription from RNA polymerase II promoter by glucose ; response to hypoxia ; response to UV" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MSSVIQVNLPQTSYNIIISPNSLGSVGRHLTSLNLEQKILVISNPEIFDYYGEIVINSLKQAGFKVFSHVIPAGETYKTLDSISKIYDTALKHRLERASTLLALGGGVIGDMTGFAAATWLRGINFIQVPTSLLAMVDASIGGKTGVNHPQGKNLIGAFYQPRLVLIDPIVLKTLPVREFRAGMAEVIKYGVIWNQGLFNQLERQKKLDSLDSINLETIQTIITQSCQAKVDVVSQDEKEAGLRAILNYGHTIGHALESLTGYREINHGEAVALGMVAAGKIAVKLGMWKEEMSQRQKNIIQKAALPVIVDYPLKSQAILESLQLDKKVKAGKVRFILPTDIGQVEIREGVPSEVITRVLEEIKM", - "output": "cytoplasm ; 3-dehydroquinate synthase activity ; metal ion binding ; nucleotide binding ; amino acid biosynthetic process ; aromatic amino acid family biosynthetic process ; chorismate biosynthetic process" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MRQAWRWFGPEAGVPLDAVRQAGATDIVSALHEVPIGQEWTSAQIVERKNLIESTPTGRHPLTWSVVESIPVSDDIKRSGKAARHDIGAWIASMEALARNDIKVICYNFMPVVDWCRTDLDYITSTGATAMRFDQDRFAAFDLHILQRKGAEKDYSEEDRIAARAIFEAMDETEIEQLIVNIASALPGSTTEPLTIPAFREKLETYASIDAAHLRRNLVEFLEAVTPVADSLGVKLTLHPDDPPRSLFGLPRIASTEADYAAIFAAVPAQSNGMCFCTGSLGVRADNDLPAIARRFASRIHFSHLRATTREGDGRTFHEAAHLEGDVDMVGILRILLEEDRKRDAGQTIIFRSDHGHRMMDDLEKKVTPGYPVIGRMRGLAELRGIITALDACALEYDPNV", - "output": "mannonate dehydratase activity ; glucuronate catabolic process" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MKEIKHFISGELVGSASGKLFDNVSPANGQVIGRVHEAGRAEVDAAVRAARAALKGPWGKMTVAERAEILHRVADGITARFGEFLEARMPGHRQAEVAGQPHRHSARRANFKVFADLLKNVANEAFEMATPDGAGALNYGVRRPKGVIGVISPWNLPLLLMTWKVGPALACGNCVVVKPSEETPLTATLLGEVMQAAGVPAGVYNVVHGFGGDSAGAFLTEHPDVDAYTFTGETGTGETIMRAAAKGVRQVSLELGGKNAGIVFADCDMDKAIEGTLRSAFANCGQVCLGTERVYVERPIFDAFVARLKAGAEALKIGEPNDPEANFGPLISHKPREKVPSYYQQAVDDGATVVTGGGVPEMPAHLAGGAWVQPTIWTGLADDSAVVTEEIFGPCCHIRPFDSEEEAIELANSLPYGLASAIWTENVRRAHRVAGQIEAGIVWVNSWFLRDLRTAFGGSKQSGIGREGGVHSLEFYTELKNICVKL", - "output": "oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor ; benzoate catabolic process via hydroxylation" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MAKQLSFSNESRDALEKGVNFVANAVKVTIGPKAKNVVIERKFGSPDVVRDGSTVAKEIEIENPISNLGAKLIEQVASKTKESAGDGTTTATILTQKMVQEGLKNIASGASPMELKKGMEVGLAFVLEKLSSKSISLSGSDIQKVATVSAGGDQEIGSIISKAMDIVTSDGVITVEESQSLDTELDITEGMSFDRGYSSPYFVTDQERQVCELENPKILITDQKISTLANLVPILEEIQKSGSPFLILAEDIEGEALTTLVLNKNSGVLNVASVRAPLFGERRKAALEDIAILTGAKLISEDKSMTLDQVSINDLGKAKKITITKDKTTIVAFEDTKDLVKARVEKLKREVEMTESEYDQDKINERIAKLAGGVALIKVGAATETEMKYKKLRIEDSLNATKAAIEEGVVSGGGQTLIEISDELLNLSQKSSDDLRTGINIVKEALLEPTKQIAKNAGFNGDVVVAEIKRLNKGFNANSGKYENLKESGILDPTKVIRLALQDSVSIAAMLLTTEVAIADIPEPEAAAPGGPGGDPMGGMGGMGGMGMPGMGGMGMPGMGGMGMPGMGGMGMPGMGGMGMPGMM", - "output": "cytoplasm ; ATP binding ; ATP-dependent protein folding chaperone ; isomerase activity ; unfolded protein binding ; protein refolding" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MPSFHNTITIGHRPNGDSKRTTYLVTGASRGIGKGLVASFLARPDSTVIACVRNVASQSKALSDLPCAEGSSLIVVKLDCAVETDPASAVEELQSAHNIRHIDVVVANAAIAGAYGPTSTLPLDAVKEHMQINCYSVLLLFQATRPLLEQAAPGKAKFVFIGAPISTITQMEECARAPLGAYGLTKLAANYLVRKFHFENKWLMSFVIDPGHVQTDMGDSGARLMGRKEAPTTLQQSVDGICARIDEATKEESSGQFLLHEDGSRLPW", - "output": "cytosol ; vacuole ; norsolorinic acid ketoreductase activity" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MIFKVFYQEKMTEVPVRENTKVLYLEATSEKDVRTKLNKFAYNIEFVQSVTGNHLEYEKANADLTLAEIV", - "output": "DNA-directed RNA polymerase complex ; DNA binding ; DNA-directed 5'-3' RNA polymerase activity ; DNA-templated transcription" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MAAASTTSRTNSRVNYSNEIHDLSTVQSGSVVPTLFYPDKSIADIFPPHLGKKVISEVVATFLLVFVTCGAASIYGEDNRRISQLGQSVAGGLIVTVMIYATGHISGAHMNPAVTLSFACFRHFPWIQVPFYWAAQFTGAMCAAFVLKAVLHPIAVIGTTTPSGPHWHALLIEIVVTFNMMFVTCAVATDSRAVGELAGLAVGSAVCITSIFAGPVSGGSMNPARTLAPAVASNVFTGLWIYFLGPVIGTLSGAWVYTYIRFEEAPAAKDTQRLSSFKLRRMQSQLAADEFDTV", - "output": "membrane ; channel activity" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MYAYVKGKLTHLYPTHVVVETAGVGYEIQTPNSYRFQKHLDHEVLIRTSLIVREDAQLLYGFSSEEEKDMFLSLIKVTGIGPKSALAILATSTPNEVKRAIENENDTYLTKFPGIGKKTARQIVLDLKGKVKITEEDSDSLLQVDATSTVQDQFVQEAMLALEALGYSKRELAKVEKTLNKNKYDSVDEAVKAGLQLVVS", - "output": "cytoplasm ; Holliday junction helicase complex ; ATP binding ; DNA binding ; four-way junction helicase activity ; DNA recombination ; DNA repair ; SOS response" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MGKRILVQRRGRGGSQFRSPSWKRDGPVRYPPNISGRGIVVEILHEPGLNAPVAKIRMENGVEFFNYAAEGLYVGQVIQVGPDAPPAVGNVLPLGKIPEGTMVFNVEKRFGDGGKFARSGGTYALVIGQRPEENKTIVRLPSGRVIEVDARGRATIGIVAGGGRVEKPFVKAGKKYHRARAKSWKYPTVRGKAMSPYAHPHGGGSHQKGGTPVPKTAPPGQKVGFIGSRCTGRGCVRARAQQKQ", - "output": "large ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MDFLNSSDQNLTSEELLNRMPSKILVSLTLSGLALMTTTINCLVITAIIVTRKLHHPANYLICSLAVTDFLVAVLVMPFSIVYIVRESWIMGQGLCDLWLSVDIICCTCSILHLSAIALDRYRAITDAVEYARKRTPRHAGITITTVWVISVFISVPPLFWRHQGNSRDDQCIIKHDHIVSTIYSTFGAFYIPLVLILILYYKIYRAARTLYHKRQASRMIKEELNGQVLLESGEKSIKLVSTSYMLEKSLSDPSTDFDRIHSTVKSPRSELKHEKSWRRQKISGTRERKAATTLGLILGAFVICWLPFFVKELVVNICEKCKISEEMSNFLAWLGYLNSLINPLIYTIFNEDFKKAFQKLVRCRN", - "output": "dendrite ; plasma membrane ; synapse ; G protein-coupled serotonin receptor activity ; neurotransmitter receptor activity ; serotonin binding ; adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway ; adenylate cyclase-inhibiting serotonin receptor signaling pathway ; chemical synaptic transmission ; G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MSKFVFVTGGVVSSIGKGIVAASLGRLLKSRGYSVSILKLDPYLNVDPGTMSPFQHGEVFVTEDGAETDLDLGHYERFTDTAMTRLNSVTTGSIYQAVINKERRGSYNGGTVQVIPHITGEIRERIHRVAANSNADIIITEIGGTVGDIESLPFLEAIREFKNDVNRNDVAYIHVTLLPYIKTSGEIKTKPTQHSVKELRSIGIQPDLLVCRSDKSINEALKKKLSGFCGVSINSVIEALDADSIYSVPLSLKKEGLCKETLNYLELEDKKCDLKNWEQLIHNLRNPGGPIKVALVGKYIELGDAYLSVVEALRHACIEQKALLDLHWVSAEMIEKNSAETYLNEVDAIVVPGGFGNRGVNGKIAAIKFARENKIPFLGLCLGMQCAVIEWARNVAHLPDASSSELDPNTPNPVIHLLPEQQDVVDLGGTMRLGVYPCRLTKNTTGKNLYDEDVIYERHRHRYEFNNYYKQSFLDSGYKISGTSPDGRLVELIELENHPYFLACQYHPEFLSRPGKPHPLFKGLIKASQDKLTQSN", - "output": "ATP binding ; CTP synthase activity ; glutaminase activity ; metal ion binding ; 'de novo' CTP biosynthetic process ; glutamine metabolic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MPVKKKRKSPGVAAAVAEDGGLKKCKISSYCRSQPPARLISGEEHFSSKKCLAWFYEYAGPDEVVGPEGMEKFCEDIGVEPENIIMLVLAWKLEAESMGFFTKEEWLKGMTSLQCDCTEKLQNKFDFLRSQLNDISSFKNIYRYAFDFARDKDQRSLDIDTAKSMLALLLGRTWPLFSVFYQYPEQSKYRVMNKDQWYNVLEFSRAVHADLSNYDEDGAWPVLLDEFVEWQKVRQTS", - "output": "cytoplasm ; nucleus ; spindle ; cullin family protein binding ; DNA damage response ; positive regulation of protein neddylation ; regulation of cell growth ; regulation of protein neddylation" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MKKRKQYCGYIAIVGKPNVGKSTLINEIIENEISITSKKKNTTQKNILGIKTKQLHQFIYVDTPGIYLNNEKDDSFKIIKSSILILFIVDRTVWKTDDEIVLNKIKKNKIPIICVINKIDKILDKSIILPHINFLLKKINPIEIIPISAKKRENIVLLENLIYPYLPNNNHIFPKKYITTHSLSFSISEIIRQKLIFFLRDELPSIITVKIESIEEKFKKKLYIRAAIYVKHERQKKIIIGKKAEGIKKISIASRLDIEKKINMKIYLIIWVKVKIKK", - "output": "cytoplasm ; plasma membrane ; GTP binding ; GTPase activity ; small ribosomal subunit rRNA binding ; ribosomal small subunit biogenesis" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MYEAVHAHPDGDATVARHAATAERYGYEGIVVRTREALDPASKSSEHADEATALRDEYGIDVVDAVEIDADNATSASGAVGNYRSDRTVVCVVGGDDGLNRFAVEEPRVDVLVRPMGGGDFNHVLAKAARDNGVHVEFDLGPLFRATGGKRVRALADLRKLREIVTYYDTPHVVSANPRSHLDLRAPREVVAAAEAVGFDAEWVREGLRAWGEIATRNRERRSEAFIEPGVRRGRYEEDG", - "output": "cytoplasm ; ribonuclease P complex ; ribonuclease P activity ; tRNA 5'-leader removal" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MMDPNSTSEDVKFTPDPYQVPFVQAFDQATRVYQDLGGPSQAPLPCVLWPVLPEPLPQGQLTAYHVSTAPTGSWFSAPQPAPENAYQAYAAPQLFPVSDITQNQQTNQAGGEAPQPGDNSTVQTAAAVVFACPGANQGQQLADIGVPQPAPVAAPARRTRKPQQPESLEECDSELEIKRYKNRVASRKCRAKFKQLLQHYREVAAAKSSENDRLRLLLKQMCPSLDVDSIIPRTPDVLHEDLLNF", - "output": "host cell nucleus ; DNA binding ; DNA-binding transcription factor activity ; protein dimerization activity ; sequence-specific DNA binding ; modulation by virus of host G0/G1 transition checkpoint ; modulation by virus of host G1/S transition checkpoint ; positive regulation of DNA-templated transcription ; regulation of DNA-templated transcription ; release from viral latency ; suppression by virus of host viral-induced cytoplasmic pattern recognition receptor signaling pathway via inhibition of IRF7 activity" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MQQTCIRLVKLDMLSTLTRFRTHSAIRCCAQRLFHCRPSLFISARTYFIKIDSSSLPKLKGSVSFSASCVSLGSSRLGLCSSSFKTGAPAALRAPVVFQRTRGFHTSGRRRALPALPLLWMVLKPLQKIMAIILGRSIRKWWVALPANKKQLFREWSWRRRWHFLGAGTGLLFIASLFFFTHLDESPITGRTRLLVFSRKNFRELAQFNADAFMEEFKDSLIASSDPRHKVVEQVVQILAQRNQDIAEISAVPWTVHVVDSPTMNAFVLPNGEIFVFTGMLNAVTDIHQLTFILGHEMAHALIGHAAEQASLSHVVELLSLVLLTAIWAVCPRDSLAALGHWIQGKLVQFLFDRPFSRKLEAEADQVGLQMAAKACADVRAGPVFWEQMEIFDQLSGQPTMPEWLSTHPSHQNRVRQLDRLIPEALELRARCNCPELPKTDPRVVFNEAVRLVLEGKKEQMLEKEEKNGKTQTGDMFP", - "output": "mitochondrial inner membrane ; mitochondrial membrane ; metal ion binding ; metalloendopeptidase activity ; diet induced thermogenesis ; energy homeostasis ; glucose metabolic process ; HRI-mediated signaling ; integrated stress response signaling ; lipid metabolic process ; mitochondrial protein processing ; mitochondrial respiratory chain complex assembly ; negative regulation of mitochondrial fusion ; positive regulation of apoptotic process ; protein autoprocessing ; protein quality control for misfolded or incompletely synthesized proteins ; regulation of cristae formation ; zymogen activation" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MGKYFGTDGVRGEANVELTPELAFKLGRFGGYVLSQHESEVPRVFVGRDTRISGEMLESALVAGLLSVGIHVYKLGVIATPGVAYLVKSEKASAGVMISASHNPALDNGIKFFGGDGYKLDDERELEIEALLDAAEDTLPRPSAEGLGDLVDYPEGLRKYQQYLVSTGLELEGMHVALDTANGAASTSARQIFADLGAQLTIIGENPDGLNINLNVGSTHPEALQEVVRESGAAIGLAFDGDSDRLIAVDENGELVDGDKIMYIIGKYLSEKGELAQNTIVTTVMSNLGFHKALDREGIQKAVTAVGDRYVVEEMRKNGYNLGGEQSGHVIIMDYNTTGDGQLSAVQLTKVMQETGKKLSELAAEVTIYPQKLVNIRVENSMKDKAMEVPAIKTVIERMEAEMAGNGRILVRPSGTEPLLRVMAEAPTDEEVNYYVDTIANVVRDEIGID", - "output": "magnesium ion binding ; phosphoglucosamine mutase activity ; carbohydrate metabolic process" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MALSTIVSQRKQIKRKAPRGFLKRVFKRKKPQLRLEKSGDLLVHLNCLLFVHRLAEESRTNACASKCRVINKEHVLAAAKVILKKSRG", - "output": "chromosome, centromeric region ; kinetochore ; nuclear matrix ; nucleolus ; nucleoplasm ; DNA binding ; protein heterodimerization activity ; cell division ; CENP-A containing chromatin assembly ; chromosome organization ; chromosome segregation ; kinetochore assembly ; mitotic cell cycle" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MKKKALLPLFLGIMVFLAGCDYSKPEKRSGFFYNTFVDPMKNVLDWLGNNLLNDNYGLAIIILVLVIRIILLPFMLSNYKNSHMMRQKMKVAKPEVEKIQEKVKRARTQEEKMAANQELMQVYKKYDMNPIKSMLGCLPMLIQLPIIMGLYFVLKDQLVDGLFKYPHFLWFDLGRPDIWITIIAGVLYFIQAYVSSKTMPDEQRQMGYMMMVISPIMIIWISLSSASALGLYWSVSAAFLVVQTHFANIYYEKVAKKEVQPFIEAYEREHNGGSNKKGKNTQVVSKKKKK", - "output": "plasma membrane ; membrane insertase activity ; protein transport" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MMNHDTESHVKISRTIYRGVSPSTTRLESRVRELEDLLDLERDARVRAERHAADLGFQVDALSERLDEAGGSTTQTQELLKRREMEINKLRKDLENANASLELAETSMRRRHQTALNELALEVENLQKQKGKAEKDKSHLIMEVDNVLGQLDGALKAKQSAESKLEGLDSQLNRLKSLTDDLQRQLTELNNAKSRLTSENFELLHINQDYEAQILNYSKAKSSLESQVDDLKRSLDDEAKNRFNLQAQLTSLQMDYDNLQAKYDEESEEASNLRSQVSKFNADIAALKSKFERELMSKTEEFEEMKRKFTMRITELEDTAERERLKAVSLEKLKTKLTLEIKDLQSEIESLSLENSELIRRAKAAESLASDLQRRVDELTIEVNTLTSQNSQLESENLRLKSLVNDLTDKNNLLERENRQMNDQVKELKSSLRDANRRLTDLEALRSQLEAERDNLASALHDAEEALHDMDQKYQASQAALNHLKSEMEQRLRERDEELESLRKSTTRTIEELTVTITEMEVKYKSELSRLKKRYESNIADLEIQLDTANKANANLMKENKNLSQRVKDLETFLDEERRLREAAENNLQITEHKRLQLANEIEEIRSTLENLERLRKHAETELEEAQSRVSELTIQVNTLTNDKRRLEGDIGVMQADMDDAINAKQASEDRAIRLNNEVLRLADELRQEQGNYKHAEALRKQLEIEIREITVKLEEAEASATREGRRMVQKLQARVRELESEFDGESRRCKDALAQARKFERQYKELQTQAEDDRRMVLELQDLLDKTQMKMKAYKRQLEEMEEVSQITMNKYRKAQQQIEEAEHRADMAERTVTVRRVGPGGRAVSVARELSVTSNRGMRATSMM", - "output": "myofibril ; myosin complex ; myosin filament" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MENISDLWNSALKELEKKVSKPSYETWLKSTTAHNLKKDVLTITAPNEFARDWLESHYSELISETLYDLTGAKLAIRFIIPQSQAEEEIDLPPAKPNAAQDDSNHLPQSMLNPKYTFDTFVIGSGNRFAHAASLAVAEAPAKAYNPLFIYGGVGLGKTHLMHAIGHYVIEHNPNAKVVYLSSEKFTNEFINSIRDNKAVDFRNKYRNVDVLLIDDIQFLAGKEQTQEEFFHTFNALHEESKQIVISSDRPPKEIPTLEDRLRSRFEWGLITDITPPDLETRIAILRKKAKAEGLDIPNEVMLYIANQIDSNIRELEGALIRVVAYSSLINKDINADLAAEALKDIIPNSKPKIISIYDIQKAVGDVYQVKLEDFKAKKRTKSVAFPRQIAMYLSRELTDSSLPKIGEEFGGRDHTTVIHAHEKISKLLKTDTQLQKQVEEINDILK", - "output": "cytoplasm ; ATP binding ; DNA replication origin binding ; DNA replication initiation ; regulation of DNA replication" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MTQHFIVIGNPIAHSKSPEIHTLFGTQAGLDICYQRQYCPDDAASFTAVIEAFFHGGGVGANVTVPFKQIAYECCAARGGLSEHAKVAGAVNTLLLNKALLAKGVPPVEALFGDNTDGQGLVNHMQRLGWPLNGARVAIIGAGGAARGVVLPLIEAGIETLSIANRTVSKAEILVDELSTASEKINQHTIQTYATADLSGDFDIIINATSIGLSGETLPLTDKLNCQYAYDMMYGRELPFLQHFSIRGAQTSDGYGMLIGQAALSFERWTGRAIDVAQATTALENVST", - "output": "NADP binding ; shikimate 3-dehydrogenase (NADP+) activity ; amino acid biosynthetic process ; aromatic amino acid family biosynthetic process ; chorismate biosynthetic process ; shikimate metabolic process" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MPAWPRFMSLRRQYLYKALDKNHQKHPIKHPHTRFLSRLFCALAVLFSYSIYQSFRTDLKQSGSWGCEMSWMSPSYRRLEWTEFISTRYALYLYREQGLDSEDTLSGHPVLFVPGNAGSYQQVRSIASSASKQYYEQVKARERNVVTGKKIDFFTADLKEEFSAFHARTVREQAVFIQHCIKGILQEYTHLPQEKRPTQVTLLAHSMGGVVARLAMDPITSISVDIIVTLSTPHILPPLALERDMDSIYSLIRWRRQHISTHPPLISICGGISDTQIVSDSCALPFFQAGNNSDIAVFTTGIPGVWTAVEHQAIIWCHQIRWRIARMLLDMSSRANTTAKLVTAKEWLLDYQEDETLKEPRSERQHDYSVSSRNMTFIGLHQPSKAFVAQQCNGLERCRTVPSVMSLLPFPNNPSDPFPLPGEGIKPSEVMLVAEISLSSTNTVVKINASQYGQTIAGSREHHLVKGNSWSEFTITMRYRYIRIQLLFCIRPTHTSTFSFYCGTLLTLPRQSWHLSGDISIALMSCTTGVAQKKLLQRTGQICDSVPYGRSCMASRVGYCGSSVSIIRFYQHRSVRTCKGFKLILVGEILPWNSALERIARRRMPICIVLLLLGATIQSQLPDFPMLHTFFLGVNQLEMVPLVGILGVWTFGLLCVVSFHLISTCAIFTTLLIPFKILHVAIWSRNIWTGSAALVSTDNNFYYAIPPVLLVKCASCGGTIQKRHVCLKACRIALIILIMSSFSVGARWTWILSPIANAVLILFVASII", - "output": "endoplasmic reticulum ; endoplasmic reticulum membrane ; phosphatidylinositol deacylase activity ; endoplasmic reticulum to Golgi vesicle-mediated transport ; GPI anchor metabolic process ; protein transport" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MHKVLAIETSCDETSVSIVSNIGDTFRIHSNIIASQIEDHSKWGGVVPELAARKHLELLPFVLEKALEQAKIKIEEVDYIASTVAPGLVGCLRVGSITARSLCMLHSKPFLGIHHLEGHLSSILFSENYPKKSFLTLLVSGGHTELIKVDDNRGMQRLGKSFDDAAGEAFDKVGRLLGLGYPGGPAIEKIAKNGDPMKFNLPKCRISDKKGGFLKYDFSFSGLKTAVLRLVERINLAGKTVPIPDIAASFERVVAEVLVERTIKCAEDHRLDNVVVVGGVAANNTLRKMMISEASKKSIKVHLAPLDLCTDNAAMIGAAALFRIKFKDHLSNLKLGVAGRLSIEQANTLYEENPPF", - "output": "cytoplasm ; iron ion binding ; N(6)-L-threonylcarbamoyladenine synthase activity ; tRNA threonylcarbamoyladenosine modification" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MRPLSELDPEELIRYISESPKRTIAKFYVKTDDPEGLAERLEERLEDAKVFTGVDHVIVIGEHDDVVEVLESEDSVEYYHKELDHRNRAVPLADYSEFEDVRIEPGAIIREKVKLGKGVVVMMGAVINIGAKIGDGTMVDMNAVVGSRAEVGKNVHIGAGAVIAGVLEPPSAKPVVIEDDVVIGANAVILEGVRVGKGAVVAAGAVVTEDVPPSKVVAGVPARVVKDVDKKTEAKTQIVDALRCL", - "output": "tetrahydrodipicolinate N-acetyltransferase activity ; diaminopimelate biosynthetic process ; lysine biosynthetic process via diaminopimelate" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MPWIQLRIDTDGPNADAISDQLMEEGSLSITFEDGKDNPIYEPTLGETPLWSHTVIVALFEANFDLTPVVERLKLLPCLGDNFSHKVEQVEDKDWEREWMDNFHPIKFGDRLWICPSWREIPDPTAVNVILDPGLAFGTGTHPTTALCLEWLDGLDYSNKDVIDFGCGSGILAVAALKLGAERVTGIDIDYQAIEASKANAERNGVEDKLALYLPEDQPADLLADILVANILAGPLRELAPLIAEKVKPGGLLALSGLLQEQAEEISAFYSEWFNMDEPAHKDDWSRLTGIRK", - "output": "cytoplasm ; histone methyltransferase activity ; protein methylation" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MEQSNRQTAEPAIRSAETVDSTINSFQETDLKVQEKEDVAAAVQTESASIDSNEQGQSVSANTNTQSQAKKLSNNSHQEPMQMVSAANKERAVLETAQNQKNGNMINLTTDKAVYQAGEAVHLNLTLNNTTSLAQNITATAEVYSLENKLKTLQYTKYLLPNESYTTQKGEFVIPANSLANNRGYLLKVNISDSQNNILEQGNRAIAVEDDWRTFPRYAAIGGSQKDNNSVLTKNLPDYYRELEQMKNMNINSYFFYDVYKSATNPFPNVPKFDQSWNWWSHSQVETDAVKALVNRVHQTGAVAMLYNMILAQNANETAVLPDTEYIYNYETGGYGQNGQVMTYSIDDKPLQYYYNPLSKSWQNYISNAMAQAMKNGGFDGWQGDTIGDNRVLSHNQKDSRDIAHSFMLSDVYAEFLNKMKEKLPQYYLTLNDVNGENISKLANSKQDVIYNELWPFGTSALGNRPQESYGDLKARVDQVRQATGKSLIVGAYMEEPKFDDNRVPLNGAARDVLASATYQTDAVLLTTAAIAAAGGYHMSLAALANPNDGGGVGVLETAYYPTQSLKVSKELNRKNYHYQQFITAYENLLRDKVENDSAEPQTFTANGRQLSQDALGINGDQVWTYAKKGNDFRTIQLLNLMGITSDWKNEDGYENNKTPDEQTNLLVTYPLTGVSMAEADRIAKQVYLTSPDDWLQSSMISLATQIKTNENGDPVLYIQVPRLTLWDMIYINETIKPETPKVPEQPQHPARTLEPAIPQTPEAVSPLPVANKQAVDENKNEIVSALTGEENDLQLPTLSKRSLSISQAELPQTGDNNETRSNLLKVIGAGALLIGAAGLLSLIKGRKKD", - "output": "extracellular region ; dextranase activity ; metabolic process" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MGCSVVGNCKSVMLMSRMSWSKLALLISVAMAAAMTDSPPTLICMGILVSVVLNWIVCAVCEEASELILGVSLETTRPSPARVIGEPVFDPRYGYVAPAIYDGKSFDVILPISALSSASTRKETVEMAVENSRLQPLESSQTPKSLVALYSQDLLSGWGSRIKGPDGQEYLLTALHVWETNISHLCKDGKKVPISGCPIVASSADSDLDFVLVSVPKNAWSVLGVGVARLELLKRRTVVTVYGGLDSKTTYCATGVAELENPFRIVTKVTTTGGWSGSPLYHKDAIVGLHLGARPSAGVNRACNVAMAFRVVRKFVTVENSELYPDQSSGPARELDAETYTERLEQGIAFTEYNISGITVKTSDREWTTAEALRVARYKPLGGGKAWGDSDDEDTQETAIRPLNLPAGGLPTGQSALGQLIEYAGYVWRDEGIINSNGMPFRSAGKSSCRFREAVCRAVHRDVRAAETEFPELKELAWPSRGSKAEIGSLLFQAGRFERVEAPANLQLAITNLQAQYPRSRPRSCFRREPWCREDFVAEIEKIAHSGEINLKASPGVPLAEIGVSNQQVIDVAWPLVCEAVVERLHALASVDPRQHDWSPEELVKRGLCDPVRLFVKQEPHSRQKIEQGRFRLISSVSLVDQLVERMLFGPQNTTEIALWHSNPSKPGMGLSKASQVALLWEDLARKHQTHPGAMADISGFDWSVQDWELWADVSMRIELGSFPALMAKAAISRFYCLMNATFQLTNGELLTQELPGLMKSGSYCTSSSNSRIRCLMAELIGSPWCIAMGDDSVEGWVDDAPRKYSALGHLCKEYEACPVLPNGDLKEVSFCSHLISKGRAELETWPKCLFRYLSGPHDVESLEMELSSSRRWGQIVRYLRRIGRVSGNDGEERSSNESPATTKTQGSAAAWGPPQEAWPVDGASLSTFEPSSSGWFHLEGW", - "output": "host cell membrane ; membrane ; nucleotide binding ; RNA binding ; RNA-dependent RNA polymerase activity ; serine-type endopeptidase activity ; DNA-templated transcription ; proteolysis ; RNA-protein covalent cross-linking ; viral RNA genome replication" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MHLHLLLILALFRAGCVVAGPSYSLSGSWRVSNGNGSLELPATVPGYVHSALHQHGLIQDPYYRFNDLNYRWISLDNWTYSTEFKIPFNLSEWQKVKLIFDGVDTVAEILFNNVTIGKTDNMFTGYSFDITNVVKDVNSLKLQFRSAVQYAECQSKAHTSYRVPPECPPVEQKGECHVNFIRKAQCSFSWDWGPSFPSQGIWKDVRIEAYNIAHLDYLTFLPVYDNASQAWNIEIKASFDVASSKSVGGQVTVAIPQLKTQQTNDIELQQEQRIVKLLVKIRKDVAVETWWPRGHGNQTGYNMTILFALDGGLKIEKAAKVYFRTVQLIEEGIKGSPGLSFYFKINGLPIFLKGSNWIPADSFQDKVTSDRLQLLFQSVVDANMNTLRVWGGGIYEQDEFYALCDELGIMVWQDFMFASALYPTEPGFLASVRKEVTYQVRRLKSHPSIIIWSGNNENEVALSVNWFHVNPRDMKTYIDDYVTLYVKNIRKIVLSEDKSRPFIASSPTNGMKTMEEGWISYDPYSIQYGDIHFYNYADDCWNWKIFPKARLVSEYGYQSWPSFSTLEKVSSQEDWAYNSRFSLHRQHHEDGNHQMLHQVKMHFKLPQGTDPLRTFKDTIYLTQVMQAQCIKTETEFYLRSRSEIVDGKGHTMGALYWQLNDIWQAPSWASLEYGGKWKMLHYFARRFFAPLLPVGFEDEGVFYVYGVSDLHKDHHTQLTVRLHHWSSPKPLCSLVNSSIVVKAGEAVVLFQMPVSELLKRCRGCTRETCVVSFYFSTDKELFSPTNYHFLSSLKDAKGLLEANITVNISQKGNVFVFDLETSAVAPFVWLDVGSIPGRFSDNGFLMIRKKLSVLFYPWKPTSKSELQQAFSVTSLTDTY", - "output": "extracellular space ; lysosomal lumen ; lysosome ; beta-mannosidase activity ; hydrolase activity ; mannose binding ; glycoprotein catabolic process ; oligosaccharide catabolic process" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MSSKNEIWKNEALISALKTIEKNYGKEALVVYNEGDDIDHDVISSGSFLIDQAIGIGGYPKGRVVEIFGPESSGKTTLALHAIAEAQKQGEIAAFIDAEHSLDLNYAKKIGVDINSLLVSQPSYGEEALDILETLVKSNSISLIVVDSVAALVPKTELEGEMSDQSIGLQARMMSKALRKLNGVISKSKTTVIFINQLREKIGIMFGNPETTTGGRALKFFSTLRIEVRKGESLIENGIVVANKVKVKVVKNKVAVPFKQTLITIGYDKGIERINEIIELATLYNILDKSGVWYSYEKEKIGQGKNAVKEWLNKNPDKLSKIEFELKEFIEKS", - "output": "cytoplasm ; ATP binding ; ATP-dependent DNA damage sensor activity ; damaged DNA binding ; single-stranded DNA binding ; DNA recombination ; DNA repair ; SOS response" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MKNFVAGAQSGRKIQSGGCAIHCQDCSISQLCIPFTLNEQELDQLDNIIERKKPIQKSQVLFKAGDSLNSIYAIRSGTIKSYTISESGEEQITSFHLPGDLVGFDAITQMQHPSFAQALETAMVCEIPFDILDDLAGKMPKLRQQILRLMSSEIKSDQEMILLLSKMNAEERLAAFIHNLSKRYSARGFSAREFRLTMTRGDIGNYLGLTVETISRLLGRFQKLGVISVQGKYITINDLNGLIELTGTNKTKITLVK", - "output": "cytosol ; 4 iron, 4 sulfur cluster binding ; DNA binding ; DNA-binding transcription factor activity ; metal ion binding" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MALRGFCSADGSDPLWDWNVTWNTSNPDFTKCFQNTVLVWVPCFYLWACFPFYFLYLSRHDRGYIQMTPLNKTKTALGFLLWIVCWADLFYSFWERSRGIFLAPVFLVSPTLLGITMLLATFLIQLERRKGVQSSGIMLTFWLVALVCALAILRSKIMTALKEDAQVDLFRDITFYVYFSLLLIQLVLSCFSDRSPLFSETIHDPNPCPESSASFLSRITFWWITGLIVRGYRQPLEGSDLWSLNKEDTSEQVVPVLVKNWKKECAKTRKQPVKVVYSSKDPAQPKESSKVDANEEVEALIVKSPQKEWNPSLFKVLYKTFGPYFLMSFFFKAIHDLMMFSGPQILKLLIKFVNDTKAPDWQGYFYTVLLFVTACLQTLVLHQYFHICFVSGMRIKTAVIGAVYRKALVITNSARKSSTVGEIVNLMSVDAQRFMDLATYINMIWSAPLQVILALYLLWLNLGPSVLAGVAVMVLMVPVNAVMAMKTKTYQVAHMKSKDNRIKLMNEILNGIKVLKLYAWELAFKDKVLAIRQEELKVLKKSAYLSAVGTFTWVCTPFLVALCTFAVYVTIDENNILDAQTAFVSLALFNILRFPLNILPMVISSIVQASVSLKRLRIFLSHEELEPDSIERRPVKDGGGTNSITVRNATFTWARSDPPTLNGITFSIPEGALVAVVGQVGCGKSSLLSALLAEMDKVEGHVAIKGSVAYVPQQAWIQNDSLRENILFGCQLEEPYYRSVIQACALLPDLEILPSGDRTEIGEKGVNLSGGQKQRVSLARAVYSNADIYLFDDPLSAVDAHVGKHIFENVIGPKGMLKNKTRILVTHSMSYLPQVDVIIVMSGGKISEMGSYQELLARDGAFAEFLRTYASTEQEQDAEENGVTGVSGPGKEAKQMENGMLVTDSAGKQLQRQLSSSSSYSGDISRHHNSTAELQKAEAKKEETWKLMEADKAQTGQVKLSVYWDYMKAIGLFISFLSIFLFMCNHVSALASNYWLSLWTDDPIVNGTQEHTKVRLSVYGALGISQGIAVFGYSMAVSIGGILASRCLHVDLLHSILRSPMSFFERTPSGNLVNRFSKELDTVDSMIPEVIKMFMGSLFNVIGACIVILLATPIAAIIIPPLGLIYFFVQRFYVASSRQLKRLESVSRSPVYSHFNETLLGVSVIRAFEEQERFIHQSDLKVDENQKAYYPSIVANRWLAVRLECVGNCIVLFAALFAVISRHSLSAGLVGLSVSYSLQVTTYLNWLVRMSSEMETNIVAVERLKEYSETEKEAPWQIQETAPPSSWPQVGRVEFRNYCLRYREDLDFVLRHINVTINGGEKVGIVGRTGAGKSSLTLGLFRINESAEGEIIIDGINIAKIGLHDLRFKITIIPQDPVLFSGSLRMNLDPFSQYSDEEVWTSLELAHLKDFVSALPDKLDHECAEGGENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDDLIQSTIRTQFEDCTVLTIAHRLNTIMDYTRVIVLDKGEIQEYGAPSDLLQQRGLFYSMAKDAGLV", - "output": "apical plasma membrane ; basal plasma membrane ; basolateral plasma membrane ; extracellular exosome ; lateral plasma membrane ; membrane ; plasma membrane ; ABC-type glutathione S-conjugate transporter activity ; ABC-type transporter activity ; ABC-type vitamin B12 transporter activity ; ABC-type xenobiotic transporter activity ; ATP binding ; ATP hydrolysis activity ; ATPase-coupled inorganic anion transmembrane transporter activity ; ATPase-coupled lipid transmembrane transporter activity ; ATPase-coupled transmembrane transporter activity ; carboxylic acid transmembrane transporter activity ; efflux transmembrane transporter activity ; glutathione transmembrane transporter activity ; xenobiotic transmembrane transporter activity ; carboxylic acid transmembrane transport ; cell chemotaxis ; cellular response to amyloid-beta ; cellular response to oxidative stress ; cobalamin transport ; cyclic nucleotide transport ; export across plasma membrane ; glutathione transmembrane transport ; heme catabolic process ; leukotriene metabolic process ; leukotriene transport ; phospholipid translocation ; positive regulation of inflammatory response ; response to xenobiotic stimulus ; sphingolipid translocation ; transepithelial transport ; transmembrane transport ; transport across blood-brain barrier ; xenobiotic metabolic process ; xenobiotic transport ; xenobiotic transport across blood-brain barrier" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MTKTFSAKAADVVHEWFVIDATDKVLGRVASEVALRLRGKHKAIYTPHVDTGDFIVIINAAQLRVTGAKSTDKIYYSHSGYPGGISSVNFRDMQAKFPGRALEKAVKGMLPKGPLGYAMIKKLKVYGGAEHPHTAQQPKVLEL", - "output": "ribonucleoprotein complex ; ribosome ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MLLQGTHRIGRMAMLLALADQNESPVLSIPKGWKYCTGKVGSMNSQKVVAAMETAAKSNQVIETDVYRETHALYHAIMEALYGVTRGQIQLADVLRTVGLRFAIVRGTPYDGKKEGEWVAVALYGTIGAPVKGSEHEAIGLGINHI", - "output": "mRNA binding ; histidine metabolic process ; positive regulation of gene expression" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MTASQRTLMVMAGGTGGHVFPGLAVAHRMEAAGWRVVWLGNPAGMEATLVPKHGIPMEYVRFGGLRGKGLKTKLTLPVNLLRACWQSLGALRRVRPDVVLGMGGYITFPAGVMTALSGRPLVLHEQNSIAGLTNKVLAKLAKRVLVAFPGALPHAEWTGNPIRAELAHTEPPHARYASRSGPLNVLVVGGSLGAAALNEVVPRALALLAPGERPRVVHQAGVKHIEALKANYEAAGFAAGEDVRLVPFIDDMAAAYAAADLVICRSGAMTVSEIAAVGVAALFVPFPYAVDDHQTTNAAFLAEAGAAVLVQQRDLSAELLADWLRGQSRASLADMAERSRALAKPEATDEVARVCAKAAGANLETLQ", - "output": "plasma membrane ; UDP-N-acetyl-D-glucosamine:N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol 4-beta-N-acetylglucosaminlytransferase activity ; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity ; carbohydrate metabolic process ; cell cycle ; cell division ; cell wall organization ; lipid glycosylation ; peptidoglycan biosynthetic process ; regulation of cell shape" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MMKMMIMSSSNLMNINFMKMNHPMSIMMTIIIQTLFISMMTGTMMESFWLSYILLLTFLGGMMVLFIYITSIASNEMFKIKINSIIIIVYMMIILSTLMYKLDKTISTEMIKNSEIMNLNYSINFKEMSTSLVKLYNNPTVIITIMMMIYLFITLLAVVKITNINQGPMRKMS", - "output": "mitochondrial membrane ; respirasome ; NADH dehydrogenase (ubiquinone) activity" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MAVFPNSCLAGCLLIFILLQLPKLDSAPFDVIGPQEPILAVVGEDAELPCRLSPNVSAKGMELRWFREKVSPAVFVSREGQEQEGEEMAEYRGRVSLVEDHIAEGSVAVRIQEVKASDDGEYRCFFRQDENYEEAIVHLKVAALGSDPHISMKVQESGEIQLECTSVGWYPEPQVQWRTHRGEEFPSMSESRNPDEEGLFTVRASVIIRDSSMKNVSCCIRNLLLGQEKEVEVSIPASFFPRLTPWMVAVAVILVVLGLLTIGSIFFTWRLYKERSRQRRNEFSSKEKLLEELKWKRATLHAVDVTLDPDTAHPHLFLYEDSKSVRLEDSRQKLPEKPERFDSWPCVMGREAFTSGRHYWEVEVGDRTDWAIGVCRENVMKKGFDPMTPENGFWAVELYGNGYWALTPLRTPLPLAGPPRRVGVFLDYESGDIFFYNMTDGSHIYTFSKASFSGPLRPFFCLWSCGKKPLTICPVTDGLEGVMVVADAKDISKEIPLSPMGEDSASGDIETLHSKLIPLQPSQGVP", - "output": "external side of plasma membrane ; signaling receptor binding ; regulation of cytokine production ; T cell receptor signaling pathway" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MVLRQLSRQASVKVGKTWTGTKKRAQRIFIFILELLLEFCRGEDSVDGKNKSTTALPAVKDSVKDS", - "output": "host cell nuclear membrane ; host cell plasma membrane ; host cell rough endoplasmic reticulum membrane ; membrane ; DNA binding ; monoatomic ion channel activity ; pore formation by virus in membrane of host cell ; protein complex oligomerization" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MKFLDEAKVYIRSGDGGNGCVAFRREKFIEFGGPSGGNGGRGGNVIIEVADGLNTLIDYRYQQHFKAQKGENGAGSDRHGANGKNIVLKVPMGTQIFDEDRETLIHDFTNVGEKFVLAEGGNGGFGNAHFKSSTNRAPRNANPGQPGEERWIWLRLKLIADAGLVGLPNAGKSTFLSKVSAAKPKIADYPFTTLHPQLGVVNADGREFVLADIPGLIEGAHEGAGLGDRFLGHVERCRVLLHLVDATCEHAGKAYKTVRTELDAYGGLLTDKIEIVALNKIDAVEPDELKKQKDRLKRAAKKTPLLLSAATGEGVKEALRALVAVIGEAPVSAKAKSAAEAEPWSA", - "output": "cytoplasm ; GTP binding ; GTPase activity ; magnesium ion binding ; ribosome biogenesis" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MENLISLVNKIQRACTALGDHGENSALPTLWDSLPAIAVVGGQSSGKSSVLESVVGKDFLPRGSGIVTRRPLVLQLHKIEEGSREYAEFLHLPRKRFTDFVAVRKEIQDETDRETGRTKQISTVPIHLSIYSPNVVNLTLVDLPGLTKVAVEGQPDSIVKDIEDMVRSYIEKPNCIILAISPANQDLATSDAIKISREVDPTGDRTIGVLTKIDLMDKGTDAVDILEGRAYRLKFPWIGVVNRSQQDINKNVDMIAARRREREYFNSTPEYKHLANRMGSEHLAKMLSKHLETVIKSKIPGIQSLINKTIAELEAELTRLGKPVAADAGGKLYAIMEICRSFDQIFKDHLDGVRPGGDKIYNVFDNQLPAALKRLQFDKQLSMENIRKLITEADGYQPHLIAPEQGYRRLIESSLITIRGPAEAAVDAVHSLLKDLVHKAISETLDLKQYPGLRVEVGAAAVDSLERMRDESKRATLQLVDMECGYLTVDFFRKLPQDVDKGGNPTHSIFDRYNDSYLRRIGTTILSYVNMVCATLRNSIPKSIVYCQVREAKRSLLDHFFTELGKMETKRLSSLLNEDPAIMERRSALAKRLELYRSAQAEIDAVAWSK", - "output": "cytoplasm ; microtubule ; phragmoplast ; plasma membrane ; GTP binding ; GTPase activity ; microtubule binding ; cell cycle ; cell division ; receptor-mediated endocytosis" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MSTTDDTHNTLSTGKCPFHQGGHDRSAGAGTASRDWWPNQLRVDLLNQHSNRSNPLGEDFDYRKEFSKLDYSALKGDLKALLTDSQPWWPADWGSYVGLFIRMAWHGAGTYRSIDGRGGAGRGQQRFAPLNSWPDNVSLDKARRLLWPIKQKYGQKISWADLFILAGNVALENSGFRTFGFGAGREDVWEPDLDVNWGDEKAWLTHRHPEALAKAPLGATEMGLIYVNPEGPDHSGEPLSAAAAIRATFGNMGMNDEETVALIAGGHTLGKTHGAAAASHVGADPEAAPIEAQGLGWASSYGSGVGADAITSGLEVVWTQTPTQWSNYFFENLFKYEWVQTRSPAGAIQFEAVDAPDIIPDPFDPSKKRKPTMLVTDLTLRFDPEFEKISRRFLNDPQAFNEAFARAWFKLTHRDMGPKARYIGPEVPKEDLIWQDPLPQPLYQPTQEDIINLKAAIAASGLSISEMVSVAWASASTFRGGDKRGGANGARLALAPQRDWDVNAVAARVLPVLEEIQKTTNKASLADIIVLAGVVGIEQAAAAAGVSISVPFAPGRVDARQDQTDIEMFSLLEPIADGFRNYRARLDVSTTESLLIDKAQQLTLTAPEMTVLVGGMRVLGTNFDGSQNGVFTDRPGVLSTDFFANLLDMSYEWKPTDESNELFEGRDRLTGEVKYTATRADLVFGSNSVLRALAEVYACSDAHEKFVKDFVAAWVKVMNLDRFDLQ", - "output": "catalase activity ; heme binding ; metal ion binding ; hydrogen peroxide catabolic process ; response to oxidative stress" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "SVNPCCDPVICKPRDGEHCISGPCCNNCKFLNSGTICQRARGDGNHDYCTGITTDCPRNRYN", - "output": "extracellular region ; toxin activity" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MPEPAKSAPAPKKGSKKAVTKTQKKGDKKRRKTRKESYSIYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK", - "output": "nucleosome ; nucleus ; DNA binding ; protein heterodimerization activity ; structural constituent of chromatin" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MSDISVEKLTELEAAAELERLARAIAHHDELYHAKDRPEISDAAYDALKRRNEAIEAHFPALVRDDSPSRRVGAAPALATFAPVVHARPMLSLDNAFSDEDVRDFVGSVYRFLGQLPDDSIAFTAEPKIDGLSMSIRYENGILVSGATRGDGTTGENVTANIRTIAEIPNRLPAGAPAVVEVRGEVYMAKSDFLTLNAQMEAEGKQTYVNPRNTAAGSLRQLDAKVTASRKLRFFAYAWGEMSDMPADTQLGMVEVFRQWGFPVNPLMKRFNSVDGLLAHYRAIGMERPTLDYDIDGVVYKVDRLDLQTRLGFRSRSPRWAIAHKFPAEQALTILRGIDIQVGRTGALTPVARLEPITVGGVVVTNATLHNEDYIKGIGQKGEPIREGRDIRIGDSVIVQRAGDVIPQIVDVVLEEGKKRGEPYQFPHVCPACGSHAVREEGEAVRRCTGGLICPAQAVERIRHFVSRNAFDIEGLGEKQVEFFFNAEDPALCIRSPADIFTLKKRQENSLTKLQNIEGFGATSVKKLYDAIDARREIALHRFLFGLGIRHVGEVNAKRLARAYLSYAAFEKAALEAVPPKEGDRTDKGSEAWQDMLAVEGIGSIVAEAVVDFYGEPHNREVLAALLAEVTPLDEEARVATGSPVEGKTVVFTGSLERMSRDEAKAMAERHGAKTAGSVSKKTDLVVAGPGAGSKLAKATELGIEVINEDDWFKLVGED", - "output": "DNA ligase (NAD+) activity ; metal ion binding ; DNA repair ; DNA replication" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MDQKQIEEIVRSVMASMGQAAPAPSEAKCATTTCTTPVTSESCALDLGSAEAKAWIGVENPHRADVLTELRRSTVARVCTGRAGPRPRTQALLRFLADHSRSKDTVLKEVPEEWVKAQGLLEVRSEISDKNLYLTRPDMGRRLCAEAVEALKAQCVANPDVQVVISDGLSTDAITVNYEEILPPLMAGLKQAGLKVGTPFFVRYGRVKIEDQIGEILGAKVVILLVGERPGLGQSESLSCYAVYSPRIATTVEADRTCISNIHQGGTPPVEAAAVIVDLAKRMLEQKASGINMTR", - "output": "ethanolamine ammonia-lyase complex ; ethanolamine degradation polyhedral organelle ; cobalamin binding ; ethanolamine ammonia-lyase activity ; amino acid metabolic process ; ethanolamine catabolic process" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MKFLFDLFPVILFFITFKIYGIYAATAVAIGATFAQIGWVWFRHGKVDTMLWVSLVLIVVFGSATLILQDETFIKWKPSVLYWLFAAALLIAQAIFKKNFIRTMMKEQLTLPEPVWARVNASWAAFFAFMGAANLYVAFNYSTETWVNFKLFGFMGLMLVFVVLQGLMLSKYMATDEDKEA", - "output": "plasma membrane" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MTYFMFLLLMALVVGLVAVASNPTPYFAALGLVVAAGVGCGVLVGHGGSFLSLVLFLIYLGGMLVVFAYSAALAAEPYPEAWGSRSVLGYVLVYLLGVGLVAGFFWGGWYEGSWVVVDGLKEFSVLRGDVSGVAVMYSSGGGMLVICAWVLLLTLLVVLELTRGLSRGALRAV", - "output": "mitochondrial membrane ; respirasome ; NADH dehydrogenase (ubiquinone) activity" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MKSTSKIYTDKDSNLDVIKGKRIAVLGYGSQGRAWAQNLRDSGLNVVVGLEREGKSWELAKSDGIIPLHTKDAVKDADIIVFLVPDMVQRTLWLESVQPYMKKGADLVFAHGFNIHYKLIEPPKDSDVYMIAPKGPGPTVREYYKAGGGVPALVAIQQDVSGTALQKALAIAKGIGATRAGVIPTTFKEETETDLFGEQVILVGGIMELMKAAFETLVEEGYQPEVAYFETINELKMLVDLVYEKGITGMVKAVSDTAKYGGMTVGKFVINEDVRKRMKEALQRIKSGKFAEEWVEEYGRGMPTVVNGLSQVQNSLEEKIGNQLKDLIQKGKPKKS", - "output": "ketol-acid reductoisomerase activity ; magnesium ion binding ; NADP binding ; isoleucine biosynthetic process ; valine biosynthetic process" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MDYQTIPSQGLSGEICVPGDKSISHRAVLLVAIAEGQTQVDGFLMGADNLAMVSALQQMGASIQVIEDENILVVEGVGMTGLQAPPEALDCGNSGTAIRLLSGLLAGQPFNTVLTGDSSLQRRPMKRIIDPLTLMGAKIDSTGNVPPLKIYGNPRLTGIHYQLPMASAQVKSCLLLAGLYARGKTCITEPAPSRDHTERLLKHFHYTLQKDKQSICVSGGGKLKANDISIPGDISSAAFFIVAATITPGSAIRLCRVGVNPTRLGVINLLKMMGADIEVTHYTEKNEEPTADITVRHARLKGIDIPPDQVLLTIDEFPVLLIAAAVAQGKTVLRDAAELRVKETDRIAAMVDGLQKLGIAAESLPDGVIIQGGTLEGGEVNSYDDHRIAMAFAVAGTLAKGPVRIRNCDNVKTSFPNFVELANEVGMNVKGVRGRGGF", - "output": "cytoplasm ; 3-phosphoshikimate 1-carboxyvinyltransferase activity ; amino acid biosynthetic process ; aromatic amino acid family biosynthetic process ; chorismate biosynthetic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MRLILSLPVLVVVLSMVLEGPAPAQAAGEISSTFERIPDKLKEFGNTLEDKARAAIESIKKSDIPAKTRNWFSEAFKKVKEHLKTAFS", - "output": "high-density lipoprotein particle ; very-low-density lipoprotein particle ; fatty acid binding ; phospholipase inhibitor activity ; lipid transport ; lipoprotein metabolic process ; negative regulation of cholesterol transport ; negative regulation of lipid catabolic process ; negative regulation of lipoprotein lipase activity ; negative regulation of very-low-density lipoprotein particle clearance ; triglyceride metabolic process ; very-low-density lipoprotein particle clearance" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MFQDNPLLAQLKQQLHSQTPRAEGVVKATEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRIVAVIHTEKERESAEPEELIEPFLTRFVGKVQGKNDRLSIVPDHPLLKDAIPCRAARGVQHEFKEGDWAVAEMRRHPLKGDRSFYADLTQYITFADDHFVPWWVTLARHNLEKEAPNGVATEMLDEGLERQDLTALNFVTIDSASTEDMDDALYAEELADGRLQLTVAIADPTAWIAEGSKLDNTAKIRAFTNYLPGFNIPMLPRELSDDLCSLRANEVRPALACRMIIAADGTIDDDIAFFAATIESKAKLAYDNVSDWLENNGTWQPDNEGIAQQIRLLHRICLSRSEWRHHHALVFKDRPDYRFVLGEKGEVLDIVAEPRRIANRIVEESMIAANLCAARVLRDKLGFGIYNVHTGFDPANADALAALLKTHGLHVDAEEVLTLEGFCKLRRELDAQPSGFLDSRIRRFQSFAEISTEPGPHFGLGLEAYATWTSPIRKYGDMINHRLLKAVIKGEAIARPQEDITQQMAERRRLNRMAERDVGDWLYARFLNDKAGTNTRFAAEIIDVSRGGMRVRLVDNGAIAFIPAPFLHAVRDELVCSQENGTVQIKGETVYKVTDVIDVTIAEVRMETRSIIARPAA", - "output": "cytosol ; exoribonuclease II activity ; RNA binding ; mRNA catabolic process" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MQSTTLYLKTAAFLGGCSLFAATALAATSTATRPQLSNADARAYTIASYMASFGTIGSLTTDNWDPTGGVGAVSGFRANYAVAADGSAQYKTVQAAIDAAVADGGVARKYISVKAGTYNELVCVPESAPPITLYSLDANANNTVIVYNNANPTPASGAKTNPCMGTSSNATVGTVRSATAMVRASNFNARNLTFKNSYVEGTFADNNQSAVALAVRGDKAILENVSVIGNQDTLYLGATNNTMVIRAYFKNSFIQGDTDFIFGAGTAVFHGCTIQYTAARLGARATSYVFAPSTAPDNPHGFLAINSTFNATGNASNNSTHLGRAWDQGVSGTSAYINGSSPNGQVVIRDSSLGAHIRLADPWGPSTAGRPYCSSKCAYSANRFFEYNNTGAGSGN", - "output": "extracellular region ; aspartyl esterase activity ; pectinesterase activity ; cell wall modification ; pectin catabolic process" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MEFLMSKHEADAPHLLIVEARFYDDLADALLDGAKAALDEAGATYDVVTVPGALEIPATISFALDGADNGGTEYDGFVALGTVIRGETYHFDIVSNESCRALTDLSVEESIAIGNGILTVENEEQAWVRARREDKDKGGFAARAALTMIGLRKKFGA", - "output": "riboflavin synthase complex ; 6,7-dimethyl-8-ribityllumazine synthase activity ; riboflavin biosynthetic process" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MDTIWDISPPIAPATPVWPGDTPVGIERVWRIEAGSPVNVARITLSPHTGAHADAPLHYDAHGAPIGAVPLDAYLGRCRVIHCIGAHPVVSPDDVRAALADAPPRVLLRTYGQAPQRAWDSAFCAVAPQTIDLLAAHGVRLVGIDTPSLDPQESKTMDAHRRIRAHGMAILEGLVLDEIAAGDYELIALPLKFATLDASPVRAVLRALPDAPR", - "output": "arylformamidase activity ; formamidase activity ; zinc ion binding ; anthranilate metabolic process ; tryptophan catabolic process to kynurenine" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MAKEKFDRSKEHANIGTIGHVDHGKTTLTAAIATVLAKNGDSVAQSYDMIDNAPEEKERGITINTSHIEYQTDKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAADGPMPQTREHILLSRNVGVPALVVFLNKVDMVDDEELLELVEMEVRDLLSEYDFPGDDVPVIAGSALKALEGDAQYEEKILELMEAVDTYIPTPERDSDKPFMMPVEDVFSITGRGTVATGRVERGQIKVGEEVEIIGLHDTSKTTVTGVEMFRKLLDYAEAGDNIGALLRGVAREDVQRGQVLAAPGSITPHTEFKAEVYVLSKDEGGRHTPFFSNYRPQFYFRTTDVTGVVHLPEGTEMVMPGDNVEMTVELIAPIAIEDGTRFSIREGGRTVGSGVVTEIIK", - "output": "cytoplasm ; GTP binding ; GTPase activity ; translation elongation factor activity" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MREEDLDWEEIGLRVGLEIHRQLDTSRKLFCRCTPELVEEVPKEPKVRRKLRPVQSEMGEFDPAALEEFKRDRTFYYLADGSFSCLVELDEEPPHEPCSEALDVAIKVTLLLGGSVVDEVHVMRKMVIDGSNTTGFQRTMLVGFGGEVPTSEGPVRISTVCLEEDAARKVKGRDQDLEVDYCLDRLGIPLIEVSTEPDIRTPEQAREAAERIGEAIKAVGGVKSGIGTVRQDVNVSIEGGAVQEIKGVQDLNLIPKVVKYEALRQANLLRIRDELRERGVSETDLIDCEPMDVTDVFEDTDSEVIRRELERGGVVYALLLPGFEGILGWELCPGRRFGTELADYARRRGVSGLFHSDELPKYGISEEEVEAVRQRLGAEDGDGFVLIAGPEDRVKSAMEAVKDRAIMALKGVPAETRRARKDGTTEYMRPRPGAARMYPETDIPPVVIDEDRVKELAEELPEKPWERKERLAEEYGLGEELVEQMFEHGVVDEFEEIVEETGVEPKVAAATLVNTIPRLEKDGYPVDNLTIDHVKEVLRLYAEGAIAKSGIEELLGALAADPDSDPEELAEELGIVMASEEEIEEVVEEAIRRYEDKIRERGMAVMGKIMGEVMEVLRGRADGKRVSELVRERIREISGE", - "output": "cytoplasm ; aminoacyl-tRNA ligase activity ; ATP binding ; glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity ; translation" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MLVNEGIRAREVRLVGANGDQIGVKSKHEALEMAQRVNLDLVCVAPNAKPPVCRIMDYGKYRYEQQKKEKEARKNQKVITIKEVRLSPTIEANDFNTKLRNARKFLEKGDKVKASIRFRGRAITHSQIGRDVLERLAKECEDIATIEARPKMEGRSMFLVMAPKTEK", - "output": "cytoplasm ; translation initiation factor activity" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MPEAVAAAVSPAAAAATAMCAEHREKLEHIERVTRNAGQEQRRVLEEILAQNAQAEYLRRLGVPGDAPGADEAFRRLAPLVTYEDILPDVLRIANGDTSPILSGKPVSEFLTSSGTSGGERKLMPTIEEEMERRSGLYSLLMPVMSRQVPGLDKGKAMYLYFVKSEWRTPGGLPARPVLTSFYRSRYFLERPHDPYTVYTSPDEAVLCEDAYQSMYAQLICGLVHRADVLRVGAVFASGFLRAIRFLEKHWPSLCRDIRAGELDGGVTDPAVRGAVGRVLRGADPALADAIEAECARPSWQGIIRRVWPSTKYIDVIVTGAMAQYIPTLEFYGGGLPLACTMYASSECYFGLNLNPMCKPSEVAYTLIPTMCYFEFLPVNSGANDVAAPEPDHRGLVDLVDVKLGHEYELVVTTYSGLYRYRVGDVLRVAGFKNAAPMFAFVRRKNVALSIDSDKTDEAELHAAVTEAVQHLAPFGASLVEYTSYADTATTIPGHYVLFWELRSPAGGTPVPASVFEDCCLAVEEGLNSVYRQCRAADRSIGPLEIRVVADGTFDKLMDYALSRGASINQYKAPRCVRPGPVVELLDGRVQATYFSPKCPKWCAGGNKQWISSGAAAKKTTTTCDSLAV", - "output": "cytoplasm ; acid-amino acid ligase activity ; response to auxin ; response to light stimulus" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MNLHEYQAKQLFARYGMPAPTGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKAGGVKLVNSKEDIRAFAEQWLGKKLVTYQTDANGQPVHQILVEAATDIDKELYLGAVIDRSSRRVVFMASTEGGVEIEKVAEETPELIHKIALDPLTGPQPYQGRELAFKLGLTGKQVGQFTKIFMGLATLFLERDLAMVEINPLVVTKQGDLICLDGKLGADGNALFRQPELREMRDPSQEDAREAHAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVGGGATKERVTEAFKIILSDDKVKAVFVNIFGGIVRCDLIADGIIGAVEEVGVNVPVVVRLEGNNAELGAKKLADSGLNIIAATSLTDAAQQVVAAVGAK", - "output": "cytosol ; succinate-CoA ligase complex ; ATP binding ; magnesium ion binding ; succinate-CoA ligase (ADP-forming) activity ; succinate-CoA ligase (GDP-forming) activity ; succinyl-CoA metabolic process ; tricarboxylic acid cycle" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MSRYRGPRVRIIRRLGALPGLTSKTPQLKSSSINQSTSNKKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEVLLQLLEMRLDNVIFRLGMAPTIPGARQLVNHRHILVNDYVVDIPSYRCKPQDFITIKNQQKSETIISKNIEFYQKYKIPNHLTYSSLEKKGLINQILDRESIGLKINELLVVEYYSRQA", - "output": "chloroplast ; small ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MLSFHQLKFNIYQKQLFDNLSITFLDSAITYIKGANGCGKTSLLRMIAGIMQPSNGNIFYKNLNINNIAKPYCTYIGHNLGLKLEMTVFENLKFWSEIYNSVETLDAAIHYFKLYDLLDEKCYTLSSGLQKVVALARLIACQSDLWLLDEVETNLSKENRDLLNNLIVMKANSGGIVLLSSHTENHIKSAQILQLT", - "output": "plasma membrane ; ABC-type heme transporter activity ; ATP binding ; cytochrome complex assembly" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MDKIVIKGGNKLTGEVKVEGAKNAVLPILTASLLASDKPSKLVNVPALSDVETINNVLTTLNADVTYKKDENAVVVDATKTLNEEAPYEYVSKMRASILVMGPLLARLGHAIVALPGGCAIGSRPIEQHIKGFEALGAEIHLENGNIYANAKDGLKGTSIHLDFPSVGATQNIIMAASLAKGKTLIENAAKEPEIVDLANYINEMGGRITGAGTDTITINGVESLHGVEHAIIPDRIEAGTLLIAGAITRGDIFVRGAIKEHMASLVYKLEEMGVELDYQEDGIRVRAEGELQPVDIKTLPHPGFPTDMQSQMMALLLTANGHKVVTETVFENRFMHVAEFKRMNANINVEGRSAKLEGKSQLQGAQVKATDLRAAAALILAGLVADGKTSVTELTHLDRGYVDLHGKLKQLGADIERIND", - "output": "cytoplasm ; UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity ; cell cycle ; cell division ; cell wall organization ; peptidoglycan biosynthetic process ; regulation of cell shape ; UDP-N-acetylgalactosamine biosynthetic process" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MATAQSNSPRVFCIGTADTKFDELRFLSEHVRSSLNSFSNKSSFKVGVTVVDVSTSRKETNSCADFDFVPSKDVLSCYARGEGTVGRFPDIRGQAIAIMNKALETFLSKANGEQNLAGVIGLGGSGGTSLLSSAFRSLPIGIPKVIISTVASGQTESYIGTSDLVLFPSVVDICGINNVSKVVLSNAGAAFAGMVIGRLESSKEHSITNGKFTVGVTMFGVTTPCVNAVKERLVKEGYETLVFHATGVGGRAMEDLVRGGFIQGVLDITTTEVADYVVGGVMACDSSRFDAILEKKIPLVLSVGALDMVNFGPKTTIPPEFQQRKIHQHNEQVSLMHTTVGENKKFAAFIAEKLNKASSSVCVCLPEKGVSALDAPGKDFYDPEATSCLTHELQMLLENNERCQVKVYPYHINDVEFANALVDSFLEMSPKSGHVECQTAESKSIQGIQNVNAVLEKYPSCNGKNFSRLNDFPNAKPETLQKRIVILQKLKDQISKGKPIIGAGAGTGISAKFEEAGGVDLIVLYNSGRFRMAGRGSLAGLLPFADANAIVLEMANEVLPVVKEVAVLAGVCATDPFRRMDNFLKQLESVGFCGVQNFPTVGLFDGNFRQNLEETGMGYGLEVEMIATAHRMGLLTTPYAFCPDEAVAMAEAGADIIVAHMGLTTSGSIGAKTAVSLEESVTCVQAIADATHRINPDAIVLCHGGPISSPEEAAYVLKRTTGVHGFYGASSMERLPVEQAITATVQQYKSISME", - "output": "ATP binding ; catalytic activity ; defense response to virus ; modulation by host of viral RNA genome replication" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MFKKLFGQLQRIGKALMLPVAILPAAGILLAFGNAMHNEQLVEIAPWLKNDIIVMISSVMEAAGQVVFDNLPLLFAVGTALGLAGGDGVAALAALVGYLIMNATMGKVLHITIDDIFSYAKGAKELSQAAKEPAHALVLGIPTLQTGVFGGIIMGALAAWCYNKFYNITLPPFLGFFAGKRFVPIVTSVVAIATGVLLSFAWPPIQDGLNSLSNFLLNKNLTLTTFIFGIIERSLIPFGLHHIFYSPFWFEFGSYTNHAGELVRGDQRIWMAQLKDGVPFTAGAFTTGKYPFMMFGLPAAAFAIYKNARPERKKVVGGLMLSAGLTAFLTGITEPLEFSFLFVAPVLYGIHVLLAGTSFLVMHLLGVKIGMTFSGGFIDYILYGLLNWDRSHALLVIPVGIVYAIVYYFLFDFAIRKFKLKTPGREDEETEIRNSSVAKLPFDVLDAMGGKENIKHLDACITRLRVEVVDKSKVDVAGIKALGASGVLEVGNNMQAIFGPKSDQIKHDMAKIMSGEITKPSETTVTEEMSDEPVHVEALGTTDIYAPGVGQIIPLSEVPDQVFAGKMMGDGIGFIPEKGEIVAPFDGTVKTIFPTKHAIGLESESGVEVLIHIGIDTVKLNGEGFESLINVDEKVTQAQPLMKVNLAYLKAHAPSIVTPMIITNLENKELVIEDVQDADPGKLIMTVK", - "output": "plasma membrane ; glucose transmembrane transporter activity ; kinase activity ; protein-N(PI)-phosphohistidine-sugar phosphotransferase activity ; phosphoenolpyruvate-dependent sugar phosphotransferase system ; phosphorylation" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MARLAAFDMDGTLLMPDHHLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGELLHRDDLPADVAELVLYQQWDTRASMHIFNDDGWFTGKEIPALLQAFVYSGFRYQIIDVKKMPLDRVTKICFCGDHDDLTRLQIQLHEALGERAHLCFSATDCLEVLPVGCNKGAALTVLTQHLGLSLRDCMAFGDAMNDREMLGSVGSGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYLTHWLDNPHLPYSPE", - "output": "4-amino-5-hydroxymethyl-2-methylpyrimidine diphosphatase activity ; magnesium ion binding ; phosphatase activity" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MTDPAKTHTPMMQQYLAIKAEYPDTLVFYRMGDFYEVFFADAEKAARLLDITLTRRGQSGGEPVVMAGVPFHSLEGYLAKLIKLGESVAICEQVGDVATSKGPVERKVVRVVTPGTLTDTELLNDKAESILLAVHQGARNTCGLAWLSVTQGEIHLAHCANDELETWLARVNPSELLYNVDVTPAFEQRLKTQRCAASARPAWQFDGALGARRLLEQLKVASLASWNAEALNEAHAAASALLGYAEHTQGRALPHVQGLQVVRSGELIELPQSTRRNLELTQTLRGEDSPTLFSLLDTCSTGMGSRALKSWLLSPRRDRAQAQARLEAIAHLRSGPQQTLRARLKGCSDVERITARLALRQVRPRELVALRQTLDKLQQQSERAAGESIGLPELLTRIFEDLQPPPGCTELLGRYVLDEPAALIRDGGVINHGCDADLDELRAIQTNCDGFLLELEGRERARTGIANLRVQFNKVHGFYIEVTQGQLDKVPDDYRRRQTLKNAERYITPELKAFEDKALSAQERALAREKWLYEQLLDQLQAFIPALSRLARALASLDALCALAERSLTLNWAAPVFVKEPCIDITQGRHPVVEARLAETGGGSFIANDCSLSGKHRMQVITGPNMGGKSTYMRQVALIVLLASVGSYVPAARCRLGPIDAIHTRIGAADDVANAQSTFMLEMTEAAQILHTATPHSLVLMDEIGRGTSTFDGLALAGGIAAYLHNKTQAFTLFATHYFELTEFPAQHHGAINVHVSAVESGANIVFLHHIEPGPASKSYGIAVAKLAGVPSAVVTHARHALSALETQQTETRAQVDLFAAPPEAAAPVQTALDRALDTIDPDTLSPREALDALYQLKKLSALA", - "output": "ATP binding ; ATP-dependent DNA damage sensor activity ; damaged DNA binding ; mismatched DNA binding ; mismatch repair" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MANTYKSIAVSIIFLLYFSCVSSQQQTKFLNHGFLEANLLKSGSSKIHPSGHLELTNTSMRQIGQAFHGFPIPFLNPNSSNLVSFPTSFVFAITPGPGAPGHGLAFVISPSLDFSGALPSNYLGLFNTSNNGNSLNCILAVEFDTVQAVELNDIDDNHVGIDLNGVISIESTSAEYFDDREAKNISLRLASGKPIRVWIEYNATETMLNVTLAPLDRPKPKLPLLSRKLNLSGIISEENYVGFSAATGTVTSSHFVLGWSFSIEGKASDFDITKLPSLPDPLPPLSPSPSPPVSVMKNSSNTMLIIIIAASAIFGILILSFLAVCFFRRTENFTGGARKFSHQTISSATGGFDNSKLLGEGNSGSFYKGQLAPTEIIAVKRITCNTRQEKTALIAEIDAISKVKQRNLVDLHGYCSKGNEIYLVYEYVINRSLDRFLFSNDLPVLKWVHRFCIIKGIASALQHLHAEVQKPLIHGNVKASNVLLDGELNARLGDYGHGSRHSTTGHVAPELVNTGKATCATDVFEFGVLIMEIVCGRRAIEPTKEPVEISLVNWVLRGVKSGNLLRRCDKRIKKKNLVSEEVLLVLKTGLLCVRRSPEDRPMMKKVLEYLNGTEHLPHDDYVV", - "output": "plasma membrane ; ATP binding ; carbohydrate binding ; protein kinase activity ; defense response to oomycetes ; protein phosphorylation" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MTSPKQSDLLILGLETSCDETAASVVRRAADGTVTVLSSVIGTQFEKHAPFGGVVPEIAARAHVESIDAIAAEAVRAAGVGFGDLDGVAATAGPGLVGGVMVGLAFGKAVALARGAPLVAVNHLEGHAVSARLGADIAYPFLLLLVSGGHCQLLEVSGVGACKRLGTTIDDAAGEAFDKIAKSLGLPYPGGPALEKLAVGGDPTRYALPRALLGRKDCDFSFSGLKTAAARIAETLTTDDARRDLAAGVQAAIARQLSERVDRAMKLYKDSHDPEDLRFVVAGGVAANGAVRAALLADCEKNGFSFAAPPLAYCTDNAAMIALAGAERLALGIFDDLDAIARPRWPLDEAAALANPANAYGRKGAKA", - "output": "cytoplasm ; iron ion binding ; N(6)-L-threonylcarbamoyladenine synthase activity ; tRNA threonylcarbamoyladenosine modification" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MTSVVYHAFSQKEAKELDVQHSGAQRAEAFVRAFLKRSMPRMSQQALEDHLQRKAVVLEYFTHRKQKEKRKKSKGLSAKQRRELRLFDIKPEQQRYSLFLPLHELWKQYIRDLCNGLKPDTQPQMIQAKLLKADLHGAIVSVTKSKCPSYVGVTGILLQETKHVFKIITKEDRLKVIPKLNCVFTVEIDGFISYIYGSKFQLRSSERSAKKFKAKGTIDL", - "output": "multimeric ribonuclease P complex ; nucleolus ; nucleoplasm ; ribonuclease MRP complex ; ribonuclease P complex ; ribonuclease P activity ; ribonuclease P RNA binding ; rRNA processing ; tRNA 5'-leader removal" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MPFRSNNPITRDELLSRFFPQFHPVTTFNSGLSGGSFLIEHQGQRFVVRQPHDPDAPQSAFLRQYRALSQLPASIAPKPHLYLRDWMVVDYLPGAVKTYLPDTNELAGLLYYLHQQPRFGWRITLLPLLELYWQQSDPARRTVGWLRMLKRLRKAREPRPLRLSPLHMDVHAGNLVHSASGLKLIDWEYAGDGDIALELAAVWVENTEQHRQLVNDYATRAKIYPAQLWRQVRRWFPWLLMLKAGWFEYRWRQIGDQQFIRLADDTWRQLLIKQ", - "output": "ATP binding ; thiamine kinase activity ; phosphorylation ; thiamine diphosphate biosynthetic process ; thiamine metabolic process" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MVKLAFPRELRLLTPSQFTFVFQQPQRAGTPQITILGRLNSLGHPRIGLTVAKKNVRRAHERNRIKRLTRESFRLRQHELPAMDFVVVAKKGVADLDNRALSEALEKLWRRHCRLARGS", - "output": "ribonuclease P activity ; tRNA binding ; tRNA 5'-leader removal" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MTILLTGGSGKTAGHIANLLKEAKLPFIVGSRSSNPHTVERHRTFDWLDEATFNNVLSVDEGMEPVSVVWLVSPPILDLAPPVIRFIDFASSRGVKRFVLLSASTVEKGGPAMGLIHAHLDTIEGVSYTVLRPSWFMENFSTRGEFPCDTIREEDTIYSAAKDGKIPFISVADIARVALRALTAPALHNKDHVLLGPELLTYDDVAEILTRVVGRNIHHVRLTESELAAKLQERGMPADEAAMHASLDSIVEAGAEEKLNTEVKDLTGEEPRHFADFVSDNKNVWLMRD", - "output": "oxidoreductase activity ; indole alkaloid biosynthetic process" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MTYPARAVVDLGAIAGNVARLREVAGPAEVMAVVKGDAYGHGLVPVARAALGAGATWLGVAQLGEALTLRAAGVDARTLTWLYAPGAPLAEALRADLDLSVAAPWALDEVVGAARESGVVARVHLKVDTGMGRSGLFLDEWGGLLDAAVRAQAAGEIDVVGVWSHLASADDAESGLTAEQTRVFAEAVRRAEDAGAHLEVRHLANSAGTLAHAATHFDLVRPGIAVVGLSPFGDRTADELGLTPAMRLEAELTIVKHAPAGQGVSYGHEYTTSEATSLAVVPLGYADGIPRHAGGAGPVQVGDTWSRIAGRVCMDQFVLDLGAGANAHAGDVAVLFGSGADGEPTAADWARAADTITYEIVTRLGPRVPRVHVGGRDA", - "output": "alanine racemase activity ; pyridoxal phosphate binding ; D-alanine biosynthetic process" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MRVVILGSGVVGVASAYYLARAGHEVTVIDREAGPALETSFANAGQISPGYAAPWAAPGVPLKAVKWMFEKHAPLAIRLDGTRFQLQWMVQMLRNCTAERYAVNKGRMVRLAEYSRDCLQALRADTGIQYEGRTGGTLQLFRTQQQLDGAAKDIAVLQEANVPFELLSPAELKHAEPALAAVSHKLTGGLRLPGDETGDCQLFTTRLAALAESLGVKFRYNTPIDALAIAGGKIAGVQCGSETVRADAYVVALGSYSTNFISNLMKIPVYPLKGYSITAPIVDAAAAPVSTVLDETYKIAITRFDQRIRVGGMAEIVGFDKTLRAARRETLEMCVNDLFPGGGDTSKATFWTGLRPMTPDGTPIVGRTPVSNLFLNTGHGTLGWTMSCGSGQLLADLISGKKPAIQADDLSVHRYLKDAPGQTRPAYA", - "output": "D-amino-acid dehydrogenase activity ; D-alanine catabolic process" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MTDAYVGAIDQGTTGTRFIVFDQHGDVVANTYEKHEQHYPEPGWVEHDPLEIWENTKSVVTAGLSAAGLDADDLAAIGITNQRETTVVWDAASGRPIHNALVWQDRRTTSRVESLEENGKIERIREKTGLEADAYFSATKTEWLLDEAEPLKLSSARASSLRDRARDGELLMGTIDSWLIYNLTGEHITDVSNASRTMLYNITDLEWDDWLLEEFDIPREMLPEVRPSSDEAVYGHTDPDGFLGAAVPVTAALGDQQAALFGQTCFDAGDAKNTYGTGSFYLMNTGEDAVSSEHGLLTTIGFQLSGEPVQYALEGSIFVTGAAIEWLEDVDLINNAAQTAELASSVDTTDGVYMVPAFTGLGAPHWDGRARGTLVGMTRGTRKAHIVRATLESIAYQTRDIAAAMEADSGVSTTTLRVDGGAVKNNFLCQLQSDIIQTDLARPEVDETTALGAAYAAGLAVGYWDSLDDLRENWRVDRSFEPEMDPSEADSKYGRWEDAVDRSLAWATED", - "output": "ATP binding ; glycerol kinase activity ; glycerol catabolic process ; glycerol metabolic process ; glycerol-3-phosphate metabolic process ; phosphorylation" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MTTISDIYAREILDSRGNPTVEVEVFLESGGWGRAAVPSGASTGAYEAVELRDKDPKRYGGKGVLDAVNNINAIIAPELVGSDALDQREIDRQLIEMDGTPNKGKLGANAILGVSLAVAKAAADALGLPLYRYLGGVNAHTLPVPMMNILNGGKHADNNVDIQEFMVMPAGASDFASALRMGAEVFHSLKAVLQSKGLNTAVGDEGGFAPNLRSNVEAIEVLLEAIAKAGYEPGKDCFIALDPASTELYKDGKYVFAGEGVTRTSDEMVEFWASLVDKYPIISIEDGLAEDDWEGWQNLTKRLGHKVQLVGDDLFVTNTERLSRGIEMGAANAILIKVNQIGTLTETLEAIEMAKKAGYTAVVSHRSGETEDTTIADIVVAVNAGQIKTGAPSRTERVAKYNQLLRIEEELDAAALYPGLKAFYNLKK", - "output": "cell surface ; extracellular region ; phosphopyruvate hydratase complex ; magnesium ion binding ; phosphopyruvate hydratase activity ; glycolytic process" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MIIDRVQVEAINSFSNLELLKEVYGLIWILPILTLLLGITIEVLVIVWLEREISASIQQRIGPEYAGPLGLLQAIADGTKLLFKEDILPSRGDIPLFSIGPSIAVISILLSFLVIPLGYRFVLADLSIGVFLWIAISSIAPIGLLMAGYSSNNKYSFLGGLRAAAQSISYEIPLTFCVLAISLLSNSLSTVDIVEAQSKYGFFGWNLWRQPIGFLVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKYGLFYLVSYLNLLVSSLFVTVLYLGGWNLSIPYISFFGFFQMNKMVGILEMTMSIFITLTKAYLFLFISITIRWTLPRMRMDQLLNLGWKFLLPISLGNLLLTTSFQLVSL", - "output": "chloroplast thylakoid membrane ; plastid ; oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor ; quinone binding ; photosynthesis, light reaction" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MGCNFSSQSKLQVPEIRASRSITPASQKSEDPYSHIRLLLLGSAESGKTTVLEQVRLLYKQHFTESEYFHRRAFIYHNIFKSIKALCRAMRMSDIQFADPINMGRAQSIIADEHGHYGLFSKDLAEKIKHIWNDKSMQKLYARRSQFNLNDSASYFLNNIDKINMVDYKPSERDLIMAYVPTCGVQNVIFTACNQSFQLFDIGGQKIDRRKWALQYEGIDAIFFCIAISEYDQVMSEDMVTNRLDDALNLLQSISEDPAFATTPIYLFLNEIDVFCEKLSVIPLSKYKPDFKGGDQDDAIDFMENLACEALGKRDRSLYRVYRCIAIDTQMMAELLSTVFKDIAKRKK", - "output": "axon ; heterotrimeric G-protein complex ; neuronal cell body ; non-motile cilium ; G protein-coupled receptor binding ; G-protein alpha-subunit binding ; G-protein beta/gamma-subunit complex binding ; GTP binding ; GTPase activity ; metal ion binding ; adenylate cyclase-modulating G protein-coupled receptor signaling pathway" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWKSLTYDEVISFVPPPLDQEEMES", - "output": "cytoplasm ; cytosol ; extracellular region ; ficolin-1-rich granule lumen ; glutamatergic synapse ; mitochondrion ; nuclear speck ; nucleoplasm ; nucleus ; secretory granule lumen ; spindle pole ; ATP binding ; enzyme binding ; MAP kinase activity ; MAP kinase kinase activity ; mitogen-activated protein kinase p38 binding ; NFAT protein binding ; protein phosphatase binding ; protein serine kinase activity ; protein serine/threonine kinase activity ; 3'-UTR-mediated mRNA stabilization ; angiogenesis ; apoptotic process ; bone development ; cartilage condensation ; cell morphogenesis ; cell surface receptor signaling pathway ; cellular response to ionizing radiation ; cellular response to lipopolysaccharide ; cellular response to lipoteichoic acid ; cellular response to tumor necrosis factor ; cellular response to UV-B ; cellular response to vascular endothelial growth factor stimulus ; cellular response to virus ; cellular senescence ; chemotaxis ; chondrocyte differentiation ; DNA damage checkpoint signaling ; fatty acid oxidation ; glucose import ; glucose metabolic process ; intracellular signal transduction ; lipopolysaccharide-mediated signaling pathway ; negative regulation of canonical Wnt signaling pathway ; negative regulation of hippo signaling ; negative regulation of inflammatory response to antigenic stimulus ; osteoblast differentiation ; osteoclast differentiation ; p38MAPK cascade ; peptidyl-serine phosphorylation ; placenta development ; platelet activation ; positive regulation of brown fat cell differentiation ; positive regulation of cardiac muscle cell proliferation ; positive regulation of cyclase activity ; positive regulation of erythrocyte differentiation ; positive regulation of gene expression ; positive regulation of glucose import ; positive regulation of interleukin-12 production ; positive regulation of muscle cell differentiation ; positive regulation of myoblast differentiation ; positive regulation of myoblast fusion ; positive regulation of myotube differentiation ; positive regulation of protein import into nucleus ; positive regulation of reactive oxygen species metabolic process ; positive regulation of transcription by RNA polymerase II ; regulation of cytokine production involved in inflammatory response ; regulation of ossification ; regulation of synaptic membrane adhesion ; regulation of transcription by RNA polymerase II ; response to dietary excess ; response to insulin ; response to muramyl dipeptide ; response to muscle stretch ; signal transduction ; signal transduction in response to DNA damage ; skeletal muscle tissue development ; stem cell differentiation ; stress-activated MAPK cascade ; stress-activated protein kinase signaling cascade ; stress-induced premature senescence ; striated muscle cell differentiation ; transcription by RNA polymerase II ; transmembrane receptor protein serine/threonine kinase signaling pathway ; vascular endothelial growth factor receptor signaling pathway" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MSVIGLWLVTVTATLSLFVWQLIFLLSIPKSIVVCLIAESLFFVAWFFYWTVIYPRYLTPFRHLPTPASRSILTGNQNGLFTENSWDVARRVSQTVPNSGLIRYYVALSNERILVTNTRALSDVLTNHSHDFGKSNLAKFALKRLTGNGLGFLEGNEHKVHRKNLMPAFTRKHVKELTPIFWDKAMEMVKGMEAEVRCGKDTSTQGTGIVEIHDWATRATLDIIGTAGFGYDFGTLHNPSNEIGQQYKKMFLEPSTAFNWLELLGNYIDFRFLMTLPVKKNRDLTAGSNFMREIAKKVIRERRHELFQRMTSQAGNMKNTKKDIITTALASDCFTDDQLVDHVMAFLVAGHESTATAFEWAMYELGHRPEMQKRVRDEVRTYLPSPSAGGVKNITFESVPYLQAICNEVLRLYPFLPFATRVAEKDTWVADQFVPKGTIVAYAAHISNRDSELWSGPALDAFDPERWMEPGKESSGGANSNYAMLTFSAGPKSCIGEAWTRAELPCLVGAMVGSFEIELVEGKQADGTVYPTVDFKMGKVLKSRDGVFVRLRRLEDW", - "output": "membrane ; heme binding ; iron ion binding ; monooxygenase activity ; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MTDVVIVSAARTAVGKFGGSLAKIPAPELGAVVIKAALERAGVKPEQVSEVIMGQVLTAGSGQNPARQAAIKAGLPAMVPAMTINKVCGSGLKAVMLAANAIMAGDAEIVVAGGQENMSAAPHVLPGSRDGFRMGDAKLVDTMIVDGLWDVYNQYHMGITAENVAKEYGITREAQDEFAVGSQNKAEAAQKAGKFDEEIVPVLIPQRKGDPVAFKTDEFVRQGATLDSMSGLKPAFDKAGTVTAANASGLNDGAAAVVVMSAAKAKELGLTPLATIKSYANAGVDPKVMGMGPVPASKRALSRAEWTPQDLDLMEINEAFAAQALAVHQQMGWDTSKVNVNGGAIAIGHPIGASGCRILVTLLHEMKRRDAKKGLASLCIGGGMGVALAVERK", - "output": "cytoplasm ; acetyl-CoA C-acetyltransferase activity ; poly-hydroxybutyrate biosynthetic process" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MARKTPIERYRNIGISAHIDAGKTTTTERILFYTGVNHKIGEVHDGAATMDWMEQEQERGITITSAATTAFWKGMGNNYPEHRINIIDTPGHVDFTIEVERSMRVLDGACMVYCAVGGVQPQSETVWRQANKYKVPRLAFVNKMDRTGANFFKVYDQLKLRLKANPVPVVVPIGAEENFKGVVDLLKMKAIIWDEASQGTKFDYVDIPAELADTCQEWREKMVEAAAEASEDLMNKYLEEGDLPEADIVKALRDRTIACEIQPMLCGTAFKNKGVQRMLDAVIDFLPSPVDIPPVKGELESGEAAERQASDEEKFSSLAFKIMTDPFVGQLIFFRVYSGVVNSGDTLLNSTKGKKERLGRILQMHANQREEIKEVRAGDIAAAVGLKEATTGDTLCDPAHPIVLERMVFPEPVISQAVEPKTKADQEKMGLALNRLAQEDPSFRVQTDEESGQTIISGMGELHLEILVDRMKREFGVEATVGKPQVAYRETIRSTAKDVDGKFVKQSGGRGQYGHAVITLEPNEQGKGYEFFDEIKGGVIPREYIPAVDKGIQDTLKSGVLAGFPVVDVKVHLTFGSYHDVDSNENAFRMAGSMAFKEAMRRANPVVLEPMMAVEVETPEDYMGNVMGDLSGRRGIVQGMEDMVGGGKIVRAEVPLSEMFGYSTSLRSLTQGRATYTMEFKHYAEAPKNVADAIISAKSK", - "output": "cytoplasm ; GTP binding ; GTPase activity ; guanosine tetraphosphate binding ; translation elongation factor activity" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MTVGSGHRWPEPSMHPTEIAYAKINLALHVRRRRADGYHDIETIFAFAEHGDIVAAEPGPARLMLAGPFAPALAGEDPEDNLVMRAADGLCALAGEAARPAIRLDKRLPVAAGIGGGSADAAAVLRLLGRAYGIAADDPRVMTLAATLGADVPACVRSATVRGGERGDRLESIAADGLHGLPLLLVNPRVALPTGPVFAAWDRVDRGPLAPGDPLAAALAGRNDLEAPATLLHPVIGEVVTLLAAQPGAILARMSGSGATCFALFGSEADRDAADRALAHRRPDWWRLTSRLR", - "output": "4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity ; ATP binding ; isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway ; phosphorylation ; terpenoid biosynthetic process" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQPPGQHGARKPRLSDYGVQLREKQKVRRIYGVLERQFRNYYKEAARLKGNTGANLLQLLEGRLDNVVYRMGFGATRAESRQLVSHKAIMVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAVKMEGVFKRIPERTDLSADINEHLIVELYSK", - "output": "small ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MNLHEYQSKKLFADYGLPVTKGYVCENVEQALSAIEKLSGSQWIAKCQIHAGGRGKAGGVKVVKSAQEVRSFFTKFLGQRLVTVQTNEQGQPIHQIYLEPCAEIQKELYLSAIIDRSSQRIVFMASSEGGMDIEEVAEKTPHLLHRVTIDPLVGAMPYQGRELAFKLGLSGKQIQQFSQIFCQLAKLFVEKDLSLLEINPLVILKNDELFCLDAKVVVDDNALYRHPDLFSMRDLTQEDPREAEAEKWNLNYVALDGNIGCMVNGAGLAMGTMDIIKLHGGRPANFLDVGGGATKERVMEAFKIILTDSAVKAVLVNIFGGIVRCDLIAKGIVSAINEIGVSVPVIVRLEGTNADLGCEILAQSNLNLIAVNSLTEAAEQAVNAAKESE", - "output": "cytoplasm ; ATP binding ; magnesium ion binding ; succinate-CoA ligase (ADP-forming) activity ; succinate-CoA ligase (GDP-forming) activity ; tricarboxylic acid cycle" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MQYSSKKNSYEDQNFQNRFFNSLNGQNKSSLNQNSSFSESSKQQVVSITYEEIGLFPRSFNRVFDRFFKQLFFDVENLVIQEYRFYRYLFLTTVKCLFILLFVPLGINFLSKNYLIRPVTEYYWNTHNHEIFLNSYQQKRAFTELKNFEEKIYFESLLLSENQIFFGLSEKNSTFPSSEKSQKSEHFSNQDEHTNDFYGKPKKFQTDSSLQQKNEEKVFLFENSKSLAFEPNLNQIHSSGFLIASADFSKNEVQNFQNLNLSNNTSQSKTDFASVFRTSVQKRLQVKILELAKHYNEESIEAITNFFADVLSFITLCYLLVRLEIQINITKSFLLEVFFGLDDSKKSLLILFITDLLVGYHSPNIWELFFQTLFDHYGLPESQTTIFLLVATLPVLLDVLFKYLIFRHLNRASPATVATYHAMIE", - "output": "chloroplast inner membrane ; proton transmembrane transporter activity" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MATNNGDVLMLEATPEAARPWASAANAEVIDALPYIDDDYGNPLIKSEVDRLVEEEMRRSSKKPADFLKDLPPLPKFDFKNCPVLGKEYERVRAGKPPVRIDFESRYKLEMPPANKRNDDAAWKQYLQKNQRSLQQKLIELENLELMSKLGPELWRQNNHRLEVFLTRMQRLAQEQNEEIEKVNRERKYHQQTTSYELNALSQEWRQLCVKNMEIQSACAMLETQIDSFKKEAAERGWNLEEKLENVEPLQMQ", - "output": "catalytic step 2 spliceosome ; cytosol ; nucleolus ; nucleus ; Prp19 complex ; defense response to bacterium ; defense response to fungus ; innate immune response ; mRNA processing ; RNA splicing" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MTTLTTLLALADSRLPIGGHVHSGGVEEAVTSGLVTNLETLHAYLVRRVRTQGLVAASIAAAVHAGTLTVAAADRETDARTPAPAARTASRAQGRGLARLARRVWPGHDWTALGRAPHLPVASGAVGAVAGLTPGQTALSVVYTTMTGSATAAQRLLALDPGDVAALTFGLAPLCDDVAAAAAEEPADLSDPLLDVLAQRHSERERPLFAS", - "output": "cytoplasm ; nickel cation binding ; nitrogen compound metabolic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MVNMKASMFLTFAGLVLLFVVCYASESEEKEFPKEMLSSIFAVDNDFKQEERDCAGYMRECKEKLCCSGYVCSSRWKWCVLPAPWRC", - "output": "extracellular region ; ion channel inhibitor activity ; toxin activity" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MEARAILRHTPTSPRKMRLVADLVRGKQVDAAKAMLAHSTKHAARTVLQTLSSAVANYSQANPEKRLDESELIVKRIYVDQGVTLKRILPAPMGRAYRVRKRANHLTIIVDEANPTDEQN", - "output": "large ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MSRIALGLAYDGSAWQGWQTQPHGVTVQDQVEAALASFAGGGGPVATVCAGRTDTGVHAAMQVIHLDTDLQRRDESWVRGVNAFLPPSIVVQWARPVSEAFHARFSARSRTYVYLLWRGRVRPALWAGRAGWAFQPLDVPAMRAAARALLGEHDFSSFRSSQCQARHPVRTLHRLDIDERGAFLVFTLRANAFLHHMVRNLIGALLQVGQGREPVAWMDALLCARDRRLGAPTFMPDGLYLSAIEYPAEFGFDELDGGITLLSPFTGALG", - "output": "RNA binding ; tRNA pseudouridine synthase activity ; tRNA pseudouridine synthesis" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MAAATGTRKKKTPRPGQWKLWLLYTAGFVPAVWTFYLGATGQLGADPVKTFEHLLGLWALRFLILTLLVTPIRDLTGITLLRYRRALGLLAFYYALMHFTTYMVLDQGLNLSAIITDIVRRPFITIGMISLALLVPLALTSNNWSIRKLGRRWSSLHKLVYIAIAGSAVHFLMSVKSWPAEPVIYAAIVAALLLWRLARPYLRTRKPALRPRGEAIALRK", - "output": "plasma membrane ; electron transfer activity ; FMN binding ; heme binding ; metal ion binding ; protein repair" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MHLEAARVIFFLWIFLQVQGIKDLSIKIYGSEIKDIDNAPRTEATKNTAKTYKVSTMRRIFDLAKHRTKRSAFFPTGVKVCPQESMEQILASLQAYYRLRVCQEAVWEAYRIFLDRLPEPGEYQDWVSVCQQETFCLFDIGKNFSNSQEHLDLLQQRMKQRNFLERKDEVVTKETLGELGQTPGLQQTLPVSHPGPCLSLPMTTAQRNPQLHPSRTPRVPTRERKIEFTDAAEDALEQKVELSISLANQKFKSELDNSQSPYYLEVAAKSQLQMQKIFKKLPGFKEIHVSGFRPKKERDGTSSTEMQLTAIFKKGKAEAKSPASDPLSLDSNKIESEGDPRGTTEEEKQRELYPTASELRKLISRALEEDQSLDVGTIQFTDEIVGSLPSLDPDTQLVLPTLLTDITKDATLSPELPLGQPRLETVDRAGHSPPGASPTDGWSPPAMTSTSLSETLPFFTASSVFPQTDQSATDIMSIDQTVLIPRLTVPTDDYSAISPLVPEISHLPTSSEDWLSTSSQDTMEYLDGVDLTKTPTSSEGPRNSVGMFPAWIIFLENITPDPGLRYITTSAMTVAARGRELVVFFSLRVANVPFSTDLFNKSSLEYQALEQRFTQLLVPNLRSNLTGFKQLEILNFRNGSVIVNSKVRFAKSVPYNLTKAVRGVLEDFRSTAAQQLDLEIDSYSLDVEPADQADPCKFLACGEFAQCVRNEWTEEAECRCRSGTQALVLPIEDCEDIPGKGTPCRSLDQSKNQVYEPGVKKFQRQQDNKVTMKRKFELLTIGYEEFNYQDWEGN", - "output": "extracellular region ; interphotoreceptor matrix ; photoreceptor inner segment ; photoreceptor outer segment ; chondroitin sulfate binding ; heparin binding ; hyaluronic acid binding ; visual perception" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MKGCIFNIDAGYLEGLCRGFKCGILKQSDYLNLVQCETLEDLKLHLQGTDYGTFLANEPSPLSVSTIDDKLREKLVIEFQHLRNHSVEPLSTFLDFITYSYMIDNIILLITGTLHQRPISELIPKCHPLGSFEQMEAIHVAATPAELYNAVLVDTPLAPFFVDCISEQDLDEMNIEIIRNTLYKAYLEAFYDFCKQIGGTTADVMCEILAFEADRRAIIITINSFGTELSKDDRAKLYPRCGKLNPDGLAALARADDYEQVKAVAEYYAEYSALFEGAGNNVGDKTLEDKFFEHEVNLNVHAFLQQFHFGVFYSYLKLKEQECRNIVWISECVAQKHRAKIDNYIPIF", - "output": "proton-transporting V-type ATPase, V0 domain ; proton-transporting ATPase activity, rotational mechanism" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MLKPLGDRVIISFVETEEKSVGGFVLAGASHDATKTAKVLAVGDGIRTLTGELVAPSVAEGDTVLVENDAGLEVKDGNEKVTVVRESDIVAVVK", - "output": "cytoplasm ; ATP binding ; protein folding chaperone" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MSGRVQKVMIPPINFIFKLLQQHTPVSIWLFEQTDIRLQGQIRGFDEFMNIVLDDAVQVDAKNNKRELGRILLKGDNITLIQAI", - "output": "cytosol ; nucleus ; post-mRNA release spliceosomal complex ; precatalytic spliceosome ; U1 snRNP ; U2 snRNP ; U2-type prespliceosome ; U4 snRNP ; U4/U6 x U5 tri-snRNP complex ; U5 snRNP ; RNA binding ; mRNA 5'-splice site recognition ; spliceosomal snRNP assembly" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MPDYAIGDVQGCYDPLQRLLELIDFNEKEDCLWFVGDLVNRGPDSLAVLRFIYSLPVKPKITLGNHDLHLLGLLFGGQPWKGHDDTLEEVMLADDGEELGHWLRKQSLLCRSSELNIVMCHAGIAPLWDLSKAVGLANELEAVLSGDSYHEFFAQMYGNKPDIWSDDLVGLDRLRVITNYFTRMRYCDAHGRLDLGYKGTLSKAPNHLYPWFEVPCRKEIEMDIVFGHWAALMGRSSHPRIHAIDTGCLWGGQLTALRLQDRQRFSVPGYGVSRFE", - "output": "bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MAQKAPMTVTFVTGNQNKLKEVRAILGEEHADKFTLEARKVDLPELQGEPEDIAKEKVMLAARQIDGPTLVEDTSLCYNALQGLPGPYVKWFLDKLGHEGLNKMLAGYDDKSAYAQCVFAYVDGPNGEPKVFVGTTDGKIVPARGPTDFGWDPVFQPDGFEETYAEMDKAVKNGISHRYRALDKFREFILAEAAGR", - "output": "cytoplasm ; dITP diphosphatase activity ; ITP diphosphatase activity ; metal ion binding ; nucleotide binding ; XTP diphosphatase activity ; deoxyribonucleoside triphosphate catabolic process ; nucleotide metabolic process" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MGRITEDLIRRNAEHNDCVIFSLEELSLHQQEIERLEHIDKWCRDLKILYLQNNLIGKIENVSKLKKLEYLNLALNNIERIENLEGCEWLTKLDLTVNFIGELSSVKTLTHNIHLKELFLMGNPCADFDGYRQFVVVTLQQLKWLDGKEIERSERIQALQNYTSVEQQIREQEKAYCLRRAKEKEEAQRKLEEENESEDKKKSSTGFDGHWYTDIHTACPSATENQDYPQVPETQEEQHNTKESDDIEDDLAFWNKPSLFTPESRLETLRHMEKQRKAQDKLSEKKKKAKPPRTLITEDGKVLNVNEAKLDFSLKDDEKHNQIILDLAVYRYMDTSLIEVDVQPTYVRVMVKGKPFQLALSTEVQPDRSSAKRSQTTGHLLICMPKVGEMITGGQRTPTSVKTTSTSSREQTNPRKKQIERLEVDPSKHSCPDVSTIVQEKRHRPKRMESQPRDEPSEEDPDFEDNPEVPPLI", - "output": "apical cytoplasm ; cilium ; cytoplasm ; cytosol ; dynein axonemal particle ; extracellular region ; motile cilium ; axonemal dynein complex assembly ; cerebrospinal fluid circulation ; cilium movement ; epithelial cilium movement involved in determination of left/right asymmetry ; epithelial cilium movement involved in extracellular fluid movement ; establishment of localization in cell ; flagellated sperm motility ; inner dynein arm assembly ; male gonad development ; motile cilium assembly ; outer dynein arm assembly ; protein localization to cilium ; protein localization to motile cilium ; regulation of protein binding ; reproductive system development" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MKVAASSLRKGSVVDMDGKLYVVLSAENIHPGKGTPVTQLNMRRISDGVKVSERYRTTEQVERAFVDDRNHTFLYSDGDGYHFMNPESYDQLVATEDVIGDAAPYLQEGMTVILSTHNDVPIAIDLPRTVVLEIVDTEPSVKGQTASSSYKPAVLSNGVKTTVPPYITAGTKVVILTEDGSYVERAKD", - "output": "cytoplasm ; translation elongation factor activity" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MTNIRKTHPLLKIINSSFVDLPAPSSLSSWWNFGSLLGVCLGVQILTGLFLAMHYTSDTATAFNSVTHICRDVNYGWLLRYLHANGASMFFICLYLHVGRGLYYGSYTYSETWNIGILLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQWIWGGFSVDKATLTRFFAFHFLLPFIVAALVMVHLLFLHETGSNNPTGIPSDPDMIPFHPYYTIKDILGFLVMLTALSALVLFSPDLLGDPDNYIPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVASILILAIIPILHTSKQRSMMFRPLSQYLFWLLVATLFTLTWIGGQPVEHPYIIIGQTASILYFLIILVFMPTISIMENYLLKW", - "output": "mitochondrial inner membrane ; respiratory chain complex III ; metal ion binding ; ubiquinol-cytochrome-c reductase activity ; respiratory electron transport chain" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MPIFPKPKVTVILANLGTPDVPTASAVRAFLKQFLSDQRVIEIPKLLWKIILYSFVLPFRPKRVAHAYASVWGQDSPMREILFAQTDALKRQLISHYPQLDLNIVPAMTYGNPGVQHILKDLAASPQEHVILLPLFPQYSATSTAPLYDAFANWIPKQRHLPGLTIIKDYYRHPVFIQALVSSVQRFQQQHGKPQKLLMSFHGIPQPYADKGDPYADRCRETARLVAKQLGLTPDDWAISFQSRFGKQEWVKPYTDELLTTWAANGIKSVQILSPAFSADCLETLEELEIQNAELFLEAGGTSYQYIPALNTSVEHLELLRQLLQAHLDALNYSLAYSAH", - "output": "cytoplasm ; ferrochelatase activity ; metal ion binding ; heme biosynthetic process" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MIEIEKPRIETIEISEDAKFGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVKYIEIEGVLHEFSAVDNVVEDVSTIIMNIKQLALKIYSEEDKTLEIDVRDEGEVTASDITHDSDVEILNPELKIATVSKGGHLKIRLVANKGRGYALAEQNNTSDLPIGVIPVDSLYSPVERVNYTVENTRVGQSSDFDKLTLDVWTNGSITPQESVSLAAKIMTEHLNIFVGLTDEAQNAEIMIEKEEDQKEKVLEMSIEELDLSVRSYNCLKRAGINSVQELADKSEADMMKVRNLGRKSLEEVKYKLEDLGLGLRKED", - "output": "cytoplasm ; DNA-directed RNA polymerase complex ; DNA binding ; DNA-directed 5'-3' RNA polymerase activity ; protein dimerization activity ; DNA-templated transcription" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MSLVHMNIGLAFTVAFLGLLMYRSHLMSSLLCLEGMMLTLFIMSSIMVLNMHFTLASMLPIILLVFAACEAAVGLSLLVMVSNTYGVDYVQNLNLLQC", - "output": "mitochondrial inner membrane ; respirasome ; NADH dehydrogenase (ubiquinone) activity ; ATP synthesis coupled electron transport" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MGKAKFPRQLKDNEAKAVARTIRVSPQKLNLVAAMIRGKKVGAALADLTFSRKRIAGTVKKTLESAVANAENNHDLDIDSLVVAEAYVGKSIVMKRFHVRGRGRASRIERPFSHLTIIVREVIEKVEVA", - "output": "large ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MVSLQFITHQTDRYTYFESALMALEGGCKWIQLRMKEAPCEEVEAVALQLKPLCKEKEAILLLDDHVELAKKLEVDGVHLGKKDMPIDQARQLLGEAFIIGGTANTFEDVVQHYRAGADYLGIGPFRFTTTKKNLSPVLGLEGYTAILSQMKEANIELPVVAIGGITREDIPAILETGVNGIALSGTILRAEDPAAETRKILNMKRIIK", - "output": "cytoplasm ; magnesium ion binding ; thiamine-phosphate diphosphorylase activity ; thiamine biosynthetic process ; thiamine diphosphate biosynthetic process" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQDHKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPVPTAATTPDGAAPLPTDQAGVTTPAADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNAEQSPAQ", - "output": "plasma membrane ; DNA binding ; regulation of cell shape" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MNALLNHMNTEQSEAVKTTEGPLLIMAGAGSGKTRVLTHRIAYLLDEKDVSPYNVLAITFTNKAAREMKERVQKLVGDQAEVIWMSTFHSMCVRILRRDADRIGIERNFTIIDPTDQKSVIKDVLKNENIDSKKFEPRMFIGAISNLKNELKTPADAQKEATDYHSQMVATVYSGYQRQLSRNEALDFDDLIMTTINLFERVPEVLEYYQNKFQYIHVDEYQDTNKAQYTLVKLLASKFKNLCVVGDSDQSIYGWRGADIQNILSFEKDYPEANTIFLEQNYRSTKTILNAANEVIKNNSERKPKGLWTANTNGEKIHYYEAMTERDEAEFVIREIMKHQRNGKKYQDMAILYRTNAQSRVLEETFMKSNMPYTMVGGQKFYDRKEIKDLLSYLRIIANSNDDISLQRIINVPKRGVGPSSVEKVQNYALQNNISMFDALGEADFIGLSKKVTQECLNFYELIQSLIKEQEFLEIHEIVDEVLQKSGYREMLERENTLESRSRLENIDEFMSVPKDYEENTPLEEQSLINFLTDLSLVADIDEADTENGVTLMTMHSAKGLEFPIVFIMGMEESLFPHIRAIKSEDDHEMQEERRICYVAITRAEEVLYITHATSRMLFGRPQSNMPSRFLKEIPESLLENHSSGKRQTIQPKAKPFAKRGFSQRTTSTKKQVSSSDWNVGDKVMHKAWGEGMVSNVNEKNGSIELDIIFKSQGPKRLLAQFAPIEKKED", - "output": "cytoplasm ; ATP binding ; ATP hydrolysis activity ; DNA binding ; DNA helicase activity ; isomerase activity ; DNA unwinding involved in DNA replication" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MAGGGKHTPTPKAIIHQKFGAKASYTVEEVHDSSQSGCLGLAIPQKGPCLYRCHLQLPEFSVVSNVFKKKKDSEQSAAELALDKLGIRPQNDDLTVDEARDEIVGRIKYIFSDEFLSAEHPLGAHLRAALRRDGERCGSVPVSVIATVDAKINSRCKIINPSVESDPFLAISYVMKAAAKLADYIVASPHGLRRKNAYPSEIVEALATHVSDSLHSREVAAVYIPCIDEEVVELDTLYISSNRHYLDSIAERLGLKDGNQVMISRMFGKASCGSECRLYSEIPKKYLDNSSDASGTSNEDSSHIVKSRNARASYICGQDIHGDAILASVGYRWKSDDLDYDDVTVNSFYRICCGMSPNGIYKISRQAVIAAQLPFAFTTKSNWRGPLPREILGLFCHQHRLAEPILSSSTAPVKSLSDIFRSHKKLKVSGVDDANENLSRQKEDTPGLGHGFRCEVKIFTKSQDLVLECSPRKFYEKENDAIQNASLKALLWFSKFFADLDVDGEQSCDTDDDQDTKSSSPNVFAAPPILQKEHSSESKNTNVLSAEKRVQSITNGSVVSICYSLSLAVDPEYSSDGESPREDNESNEEMESEYSANCESSVELIESNEEIEFEVGTGSMNPHIESEVTQMTVGEYASFRMTPPDAAEALILAVGSDTVRIRSLLSERPCLNYNILLLGVKGPSEERMEAAFFKPPLSKQRVEYALKHIRESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSRLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPKLLIVSTPNYEFNTILQRSTPETQEENNSEPQLPKFRNHDHKFEWTREQFNQWASKLGKRHNYSVEFSGVGGSGEVEPGFASQIAIFRREASSVENVAESSMQPYKVIWEWKKEDVEKKKTDL", - "output": "cytoplasm ; nucleus ; metal ion binding ; O-methyltransferase activity ; peptidyl-prolyl cis-trans isomerase activity ; RNA binding ; RNA methyltransferase activity ; small RNA 2'-O-methyltransferase activity ; leaf proximal/distal pattern formation ; leaf vascular tissue pattern formation ; miRNA processing ; miRNA-mediated gene silencing by mRNA destabilization ; piRNA processing ; regulation of flower development ; RNAi-mediated antiviral immune response ; siRNA processing ; specification of floral organ identity" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MATFNLTIVSAEQKIFEGEVKQIQVTGVEGELGILPGHTPLLTAIKPGIVKFTLKDGNEEVIYVSGGFLEVQPNIVTVLADIAIRGSELDADRIHEAKRKAEENIVSRGSDADHDLLVAKLSKELAKLRAYELTEKLLKTRR", - "output": "plasma membrane ; proton-transporting ATP synthase complex, catalytic core F(1) ; ATP binding ; proton-transporting ATP synthase activity, rotational mechanism" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MSEFITVARPYAKAAFDFAVEHQSVERWQDMLAFAAEVTKNEQMAELLSGALAPETLAESFIAVCGEQLDENGQNLIRVMAENGRLNALPDVLEQFIHLRAVSEATAEVDVISAAALSEQQLAKISAAMEKRLSRKVKLNCKIDKSVMAGVIIRAGDMVIDGSVRGRLERLADVLQS", - "output": "plasma membrane ; proton-transporting ATP synthase complex, catalytic core F(1) ; proton-transporting ATP synthase activity, rotational mechanism" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MSLLTEVETYVLSIVPSGPLKAEIAQRLEDVFAGKNTDLEALMEWLKTRPILSPLTKGILGFVFTLTVPSERGLQRRRFVQNALNGNGDPNNMDRAVKLYRKLKREITFHGAKEIALSYSAGALASCMGLIYNRMGAVTTEVAFGLVCATCEQIADSQHRSHRQMVATTNPLIRHENRMVLASTTAKAMEQMAGSSEQAAEAMEVASQARQMVQAMRAIGTHPSSSAGLKDDLLENLQAYQKRMGVQMQRFK", - "output": "host cell nucleus ; membrane ; virion membrane ; RNA binding ; structural constituent of virion ; viral budding from plasma membrane" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MFKSGFVTIIGRPNVGKSTLLNHIMGEKLSIVSSKPQTTRNNIQTILTGEEYQIVFVDTPGMHNPRHKLGEYMVKVAKESMNEVDVALFVTTPDVEVKRGDLHILEQLKSAKVPVFLVVNKIDETTEERLAATLKNYSEAFEFQEIIPISAQKGKNVDKLIELMVKHLNEGPKYYPDDMIIDKQERFIIAEIIREKALRFLSQEVPHGIAVEILQMKEENEKYKIEATIMCEKDSHKGIIIGKGGEMLKKISQSARKSAEKFLDKRVNMKIWVKVKKDWRDSPFVLGELGYKAPKK", - "output": "cytoplasm ; plasma membrane ; GTP binding ; GTPase activity ; small ribosomal subunit rRNA binding ; ribosomal small subunit biogenesis" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MALSGILSKRVIAHRADENELEDDFSSSEELNTLGSEDDEDEDEDEDEGEGEGDESENEEAPDNASSEDDGDNDIKSSLSQISFGALAKAQQSLGPLKKGAKRKHGSEEEEEEDNKNTKYKKSKSDALNELRERIRRAKEEKASKSEGSRDNELLDKKHKEARSSKHAPAVQSSKYAVSRRRVVVDGENVAQVKSRDPRFDSAVQSYSHNAKSSSYATSHSDLAAAKNYAFLNEYRDAELKELEEKLRRSKKDDEKARLKKMITSMKDRKRAMENRERERQVLAKHRKKERELIKEGKKEKAWFLKKADLKKEALKEKYESMGAKERQKGIERRRKKVASKEKKEMPRSRRMVEG", - "output": "nucleolus ; ribonucleoprotein complex ; cleavage involved in rRNA processing" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MARVTVEDCLEKVDNRFLLVMLASKRVKQLFKGARPLIDNRGANKNVVVSLREIAAGKIGCEIGKKGR", - "output": "DNA-directed RNA polymerase complex ; DNA binding ; DNA-directed 5'-3' RNA polymerase activity ; DNA-templated transcription" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MNFKLRTLLAFSLVLFLGIVSSSPIVPHYLRAIDVSKAVTPKQVENDLGKVLSKGTLIFGPSNPAFADATERWSTHSMPADIQVVIEVAQESDVAKVVKYCHQNNINFLAYTRGHGSTNTVSKFKGIEINLSKLTGIAIQPDKKSALFQGGVYADLIINKLWSQGYIVPTGSNGCVGLFGPALGGGLGRYQGQYGLISDNFVSLNVVLANGTSTTVNAISNSDLFWAMKGAGHNFGIVTSAYIKIYPRKAKTWHYHNYVWSQDKLEKVFEALNRFQGKGQIPALMGVNFGQFSIEPRISETEAVIIWSFAYDGPAAAAEKLLAPFNAIFAISSTKGDVSYSELLVAQQTDINSSSCSSQPYVGSTTWLQTYNVTSQRAIYDLFNKQIAQNPGLAPGARVFFEGYSTKATQTIDPNSSSYPHRDEYLLVFFAVVTPPSLESVGRAWADKTLAIWHASQPGRRPATYVNYAVGNEPLESIYGYNGQLTKLRALKSKYDPLNKFRWYNPIVAY", - "output": "FAD binding ; oxidoreductase activity ; metabolic process" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MDGTTTTLPLAGIRVIDAATVIAAPFCATLLGEFGADVLKVEHPIGGDALRRFGTPTARGDTLTWLSESRNKRSVTLNLQHPEGARVFKELIAHSDVLCENFRPGTLEKWGLGWDVLSKINPRLIMLRVTGYGQTGPYRDRPGFARIAHAVGGIAYLAGMPKGTPVTPGSTTLADYMTGLYGCIGVLLALRHREQTGRGQYIDAALYESVFRCSDELVPAYGMYRKVRERHGSHYNEFACPHGHFQTKDGKWVAISCATDKLFARLANAMGRPELASSSVYGDQKVRLAHASDVNEIVRDWCSSLTRAEVLERCYATATPAAPLNDIADFFGDRHVHARRNLVAIDAEDLGETLIMPNVVPKLSETPGSIRSLGPKLGEHTEEVLKEILGMCDEQINDLRSKRVI", - "output": "CoA-transferase activity ; succinate-citramalate CoA-transferase activity ; carbon fixation by 3-hydroxypropionate cycle" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MRVKGIRKNYQHLWKGGILLLGTLMICSAVEKLWVTVYYGVPVWKETTTTLFCASDAKAYDTEVHNVWATHACVPTDPNPQEVVLENVTEDFNMWKNNMVEQMQEDVINLWDQSLKPCVKLTPLCVTLNCKDVNATNTTSSSEGMMERGEIKNCSFNITKSIRDKVQKEYALFYKLDVVPIDNKNNTKYRLISCNTSVITQACPKVSFEPIPIHYCAPAGFAILKCNNKTFNGKGQCKNVSTVQCTHGIRPVVSTQLLLNGSLAEEKVVIRSDNFTDNAKTIIVQLNESVKINCTRPSNNTRKSIHIGPGRAFYTTGEIIGDIRQAHCNISRAQWNNTLKQIVEKLREQFNNKTIVFTHSSGGDPEIVMHSFNCGGEFFYCNSTQLFNSTWNDTEKSSGTEGNDTIILPCRIKQIINMWQEVGKAMYAPPIKGQIRCSSNITGLLLTRDGGKNESEIEIFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTKAKRRVVQREKRAVGIGALFLGFLGAAGSTMGARSMTLTVQARQLLSGIVQQQNNLLRAIEAQQHMLQLTVWGIKQLQARVLAVERYLKDQQLMGIWGCSGKLICTTAVPWNTSWSNKSLDSIWNNMTWMEWEKEIENYTNTIYTLIEESQIQQEKNEQELLELDKWASLWNWFGITKWLWYIKIFIMIVGGLIGLRIVFSVLSIVNRVRQGYSPLSFQTLLPATRGPDRPEGIEEEGGERDRDRSGQLVNGFLALIWVDLRSLFLFSYHRLRDLLLTVTRIVELLGRRGWEILKYWWNLLQYWSQELKNSAVSLLNATAIAVAEGTDRIIEVVQRVYRAILHIPTRIRQGLERALL", - "output": "host cell endosome membrane ; host cell plasma membrane ; membrane ; viral envelope ; virion membrane ; structural molecule activity ; actin filament reorganization ; clathrin-dependent endocytosis of virus by host cell ; fusion of virus membrane with host endosome membrane ; fusion of virus membrane with host plasma membrane ; mitigation of host antiviral defense response ; positive regulation of cell growth ; positive regulation of establishment of T cell polarity ; positive regulation of plasma membrane raft polarization ; positive regulation of receptor clustering ; viral protein processing ; virion attachment to host cell" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MELELLFQNVVNSSAFYNNQVAVAVSGGVDSIVLLHLMTNWAKKNKLSLPIALTVNHGLRPESQKEADFVVSYAKELGAKESFILNWEKQNIKGNIQLQARKARYKLLAEWCKNNNVKYLLVAHHKDDQAETFLLRLERGSGVDGLSSMDYKSFLNGIDIFRPLLNFSRSEIEKYAKLHRLKWIEDRSNHDLKYRRTLYRNLLKASDNQEILTERICLTALHMKRAAKALMHYTRLAFNDCVNVHDLGYIEIKLSEFYQLPEEIALRLLLYSIMAIASKHYKPRYSSLIAIFNRILQKDSNVNCTLSGCKIRKYGENILIIRESSRIQEITVNLPLNEPTQWDNRFSCTILGNQGCSVIIAPLKKTQKVPEFLKDYNCCPEVFYSLPTVQKDSKVLAYPDVNYNGKNTNDDKVQCIINSTIKQNLVSLISI", - "output": "cytoplasm ; ATP binding ; ligase activity, forming carbon-nitrogen bonds ; tRNA modification" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MSGKIPKYFITELLSRTNIIELINTRLELKKYGKNYQTNCPFHHDKTPSFTVSNEKQFYYCFGCNAHGNAIDFLIQYEHLSFIESIEELALIHGVKIPFENTVQNSIYVKKQKLYLLMEKICKLYKKNINVTHLANKYLARRGINQNMIDFFLIGFSSLKWNEFYKKINISKEFEQELLINNIIATDKNGYIYDRFQGRIIFPIQDNHGRIIGFGGRSLNDMSPKYLNSPETDIFYKRKQIYGLYQVIKKCSKPVYLLVVEGYIDVITLTQYNIDYAVSILGTSTTTEHIQLLFKNTDIIICCYDGDDAGKNAAWKTLKKALPYISDKKTLKFILLPNQEDPDTIIRKEGREKFQKRIDNAITMSKFFFKNILKNINLSSDDDKFHLSVHALPLINTISSDTIRIYLRQILARMIGILDDNQFEKFLYEKETKNTQKTYFQIKRTPMRTLIGLLVQNPSLAKLVPVTMKFKNLQIKGLSIFLEILQTCRDNPNIHTGQLLELYRNTTIINVLKILARWDHMIIQKETQNMFLDLLMNIHDKILEKRREYLIAKERKKGLQMNEKKEIWSINKKLSKR", - "output": "DNA-directed RNA polymerase complex ; primosome complex ; DNA binding ; DNA primase activity ; zinc ion binding" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MKRKTSPILSWLLTIGFAFIAFIAVFPLLNLILASFRPSTELMRNGITLIFDPSTLTLDNFIYIFTEAGLYWTWFGNSVWISIVIVVLSLLFSSMVGYALAVYDFKGRNFFFLLVLIILMIPFEILMLPLFQLMIKLQLVNTYTAVILPAIVAPIAVFFFRQYALGLPKELMDAARIDGCTEYGIFFKIMLPLMGPSLAAMAILQGLNSWNNFLWPLVVLRSNDMFTLPIGLATLLTPYGNNYDILLAGSVMTIVPIVILFIFFQRYFIAGLTVGGVKG", - "output": "plasma membrane ; carbohydrate transport ; transmembrane transport" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MSIEETVIELFDRLFMEDVSEMMDEDLFDAGVLDSLGTVELIVELESTFNIKVPISEFGRDDWNTVTKIVQGVEELQHA", - "output": "cytoplasm ; D-alanyl carrier activity ; cell wall organization ; lipoteichoic acid biosynthetic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MANKREFPLERTRNIGIMAHIDAGKTTTTERILYYTGKIHKIGETHEGASQMDWMAQEQERGITITSAATTAAWKNHRINIIDTPGHVDFTIEVERSLRVLDGAVAVLDAQAGVEPQTETVWRQASDYDVPRIVFANKMDKLGADFDFSVQSIHDRLQANALPIQMPIGAEDDFQGIIDLVEMKADLYDVDELGTEWETVDVPDEYKEEAEKRRNEMIEQLADIDENIMEKYLGGEDISVAEIKAAIRKGTLALELFPVLAGSAFKNKGVQMMLDAVVDYLPSPLDVKPYSATDPETGDQVELIAGDDKSFAALAFKVATDPFVGRLTFIRVYQGTLESGSYVLNATKGKRERVGRLLQMHSNQRQEIPEVFSGDIAAAIGLKNTTTGDSLTDPAHPLQLESMVFPDPVIEVAVEPKSKADQDKMDIALQKLAEEDPSFRAETNPETGETVIAGMGELHLDIIVDRMKREFNVEATIGAPQVSYREAFTKKTSAQGKFVRQSGGKGQYGDVWVEFEPNEEGKGFEFEDAIVGGVVPREYIPSVEEGLREAMNNGVLAGYPLVDVKAKLYDGSYHDVDSSEAAFKVAASLALRAAAKTAAPVILEPIMKVEIRVPEEYMGDIMGQVTARRGRVDGMEAIAGAEEIHAFVPLSEMFGYATTLRSASQGRGTFTMTFDHYEAVPKSIQEEIIKKNGGHAE", - "output": "cytoplasm ; GTP binding ; GTPase activity ; translation elongation factor activity" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MDLISHQPNKNPNSSTQLTPPSSSRYENQKRRDWNTFCQYLRNHRPPLSLPSCSGAHVLEFLRYLDQFGKTKVHHQNCAFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGPPEANPFGSRAVRLFLREVRDFQAKARGVSYEKKRKRVNRQKPQTQPPLQLQQQQQQPQQGQSMMANYSGATV", - "output": "nucleus ; DNA binding ; mRNA transcription ; post-embryonic plant morphogenesis ; response to blue light ; response to far red light ; response to light stimulus ; response to red light ; unidimensional cell growth" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MSETIPKKPLKKGSLVFVDKNIYDKSIEALASDSDLPAYIFEGPGEILGIKEEYAQVRWRRPVPDVWFKLDQLKEYLASE", - "output": "plasma membrane-derived thylakoid membrane ; oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor ; quinone binding" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MSYAVIVTGGKQYKVAEGEFLKIEKLEVATGESVTFDRVLLVANGEEVTIGAPVVAGAKVVAEVVSQGRHDKVRIIKFRRRKHHMKRMGHRQWFTEIKITGIQA", - "output": "cytoplasm ; ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "METAEGPHLVRLYVYDMSRGLARRLSPVMLGKQLEGIWHTSIIVFDEEFFYGREGITSCLPGRTMLGEPDSVMELGITEVTEEIFLEYLSSLGESGFSGESYHLFDHNCNTFSNEVAQFLTGKKIPSYITELPSEVLSTPLGQALRPLLDSVQIQPAGGNIFNRQSGPS", - "output": "cytoplasm ; nucleus ; peptidase activity ; proteolysis" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MAAEKCAEEFGDSSAASLKIVPKDYAYPLLEDPQGALTTPTEGGRTLVTRGGFNYFHYGCDGHQDAGWGCGYRTLQSAISWIQRRQGSSGHVPSIREIQQILVAIGDKGPEFVGSRDWIGTLEEFYVIDVLHQVPCKILHAKELSSDEILGELRSYFEKYQGFVAMGGLSDTASKAITGYHCSARGRIFLQVVDPHFVGVPSSRQHLIDLGYVRWVPVDEFAGSTYNLCLILQP", - "output": "deUFMylase activity ; proteolysis" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MADGAGIDRKADEKIQFSTSKEVTVHPTFESMSLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISMLQVIDTAVRETQALVLSPTRELATQIQSVVMALGDYMNVQCHACIGGTNVGEDIRKLDYGQHIVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNQGFREQIYDVYRYLPPATQVVVVSATLPYDVLDMTTKFMTDPVRILVKRDELTLEGLKQYFIAVEKEDWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGDMPQKERDSIMQDFRQGNSRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTSEDVRILRDIECMWLPSPCFSCG", - "output": "nucleolus ; ATP binding ; ATP hydrolysis activity ; RNA binding ; RNA helicase activity ; rRNA processing" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MTATLERRSSQGLWDRFADWVTSTNNRFYVGWFGVLMIPTLLSATICFVVAFVAAPPVDMDGIREPISGSLLYGNNIITGAVIPSSNAIGLHFYPIWEAASMDEWLYNGGPYQLVVFHFLIGVFCYLGREWELSYRLGLRPWICIAYSAPVAAAAAVFLIYPIGQGSFSDGMPLGISGTFNFMFVFQAEHNILNHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETSMEESQNYGYKFGQEEETYNIIAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVIGIWFTALGISVMAFNLNGFNFNSSIVDSQGRAIYTWADIVNRANLGMEVMHERNAHNFPLDLAGTESAPVAVGNADLNG", - "output": "photosystem II ; plasma membrane ; chlorophyll binding ; electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity ; iron ion binding ; oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor ; oxygen evolving activity ; photosynthetic electron transport in photosystem II ; response to herbicide" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MFDAAPIKKVSVVIPVYNEQESLPELIRRTTAACESLGKAWEILLIDDGSSDSSAELMVKASQEADSHIISILLNRNYGQHAAIMAGFSHVSGDLIITLDADLQNPPEEIPRLVAKADEGFDVVGTVRQNRQDSLFRKSASKIINLLIQRTTGKAMGDYGCMLRAYRRPIIDTMLRCHERSTFIPILANIFARRATEIPVHHAEREFGDSKYSFMRLINLMYDLVTCLTTTPLRLLSLLGSVIAIGGFSLSVLLIVLRLALGPQWAAEGVFMLFAVLFTFIGAQFIGMGLLGEYIGRIYNDVRARPRYFVQQVIYPESTPFTEESHQ", - "output": "plasma membrane ; phosphotransferase activity, for other substituted phosphate groups ; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase activity ; 4-amino-4-deoxy-alpha-L-arabinopyranosyl undecaprenyl phosphate biosynthetic process ; lipid A biosynthetic process ; lipopolysaccharide biosynthetic process ; response to antibiotic" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MAKTSMVAKQQKKQKYAVREYTRCERCGRPHSVYRKFKLCRICFRELAYKGQIPGVRKASW", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; zinc ion binding ; translation" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MKPSIVAKLEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMMLDDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGSGDRSDRNRTYNFPQGRVTDHRINLTLYRLDEVMEGKLDMLIEPIIQEHQADQLAALSEQE", - "output": "cytosol ; ribosome binding ; translation release factor activity, codon specific ; translational termination" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MIGTILAVGFGGFLGAISRMLTSSFFNKIIPHDFPYGTLLVNIIGSFLMGLFFSYASSKGVHIFTKSLISTGFLSAFTTFSTFSYENLLFLQSGDYFHFFLNIILNVILCLLAVWIGFLIFK", - "output": "plasma membrane ; fluoride transmembrane transporter activity" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MRTNPTTSRPGVSTIEEKSTGRIDQIIGPVLDVTFPPGKLPYIYNALVVKSRDTDGKQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNLEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFQLILSGELDGLPEQAFYLVGNIDEASTKAINLEEENKLKK", - "output": "chloroplast thylakoid membrane ; plastid ; proton-transporting ATP synthase complex, catalytic core F(1) ; ATP binding ; proton-transporting ATP synthase activity, rotational mechanism ; proton-transporting ATPase activity, rotational mechanism" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MGDVLVVFRVLPEDVDNDLSRLESKIREKLNGVCKINDIKTEEIGFGLKALNVQAIMPDEEGMADRVESILAGIEGVSQVDTKDISLI", - "output": "translation elongation factor activity" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MEEFQVYLELNRSRRHDFLYPLIFREYIYALAHEHGLNKSMIFFENQGYGNKFSSPIVKRLILRMDQQNRLISSANDSNQNPVFGHNNNLYSQMIAAGFAVIVEIPFSLRLISYSQGAEAAKSHNFQSIHSIFPFLEDKFSHLNYVLEALIPHPIHLEILVQALRYWVKDACSLHLLRFSLYEYCNLKSFITPKKSISIFNPRLFLFLYNSHTCEYESIFLFLRNQSSHLRSTSSGVFLERIFFYGKIKYLGEVFYNDFQNNLWLFKDPFIHFIRYQGKSILASKDTSLLINKWKYYFVDLWQYYFYLWSQSGRVRINQLSKYSLDFLGYLSSVRLNPSVVRSQMLENSFLIDNAVKTLDTRIPIISLIGSLSKAKFCNTLGHPISKPTWADSPDSDIIDRFVRISRNLSHYHSGSSKKKSLYRIKYILRFSCVKTLARKHKSTVRAFLKKLGSEFLEEFFTETEEEHVFSLIFPRGFFALRKVYRGRIWYLDIICINALVNHS", - "output": "chloroplast ; RNA binding ; mRNA processing ; RNA splicing ; tRNA processing" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MEAGCEGSSPQTLGERTMGEEGERVKPFTPEKAKEVIMSLQQPAIFCNMVFDWPSRHWTAKHLSKVLEGKQIRFRMGLRSTGTVPQFETECSYVDATLEEFLAWNCDQSRISGPFKKYDHSKFWAYADYKYFVTLFEDKTDVFQEVMWSDFGFPGRNGQESTLWIGSLGAHTPCHLDSYGCNLVFQVQGRKRWHLFPPEDTPFLYPTRIPYEESSVFSKINVVNPDLKRFPQFQKARRHMVTLSPGQVLFVPRHWWHYVESLDPVTVSINSWIELEEDHLARVEEAVTRMLVCTLKTAEDPHHPRTWLNPTEVEETSHEVNSCYLNSAVCAFFDHCERAKEVEMQAPRANGEEPGVQEHMEVEQARDPSSDVGAGKQEAASPFGPDLVPVTPASEERGGALEGDSQECTSRNGEHCAELPCARRQQASKGARAEAGQSAPRYPVAPSRVFVSTDDLLDCLVNPQVTRMVAQLLIQGKSL", - "output": "cytoplasm ; 2-oxoglutarate-dependent dioxygenase activity" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MTIMRKNHPLLKLVNSSFIDLPTPSNISSWWNFGSLLGVCLIMQILTGLFLAMHYTSDTATAFSSVTHICRDVNYGWLIRYLHANGASMFFICMFIHVGRGIYYGSYMLSETWNIGIILLLTTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITAFVLVHLLFLHETGSNNPSGLNSDSDKIPFHPYYTIKDLLGVLLLLMVLMILVLFFPDVLGDPDNYTPANPLNTPAHIKPEWYFLFAYAILRSIPNKLGGVLALILSILVLALFPLINSSKQHGLVYRPITQTIYWIFIANLLILTWIGGQPVEYPFTTIGQIASIMYFSIIIIFMPMASMIENDILKLHY", - "output": "mitochondrial inner membrane ; respiratory chain complex III ; metal ion binding ; ubiquinol-cytochrome-c reductase activity ; respiratory electron transport chain" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MKFTKMHGLGNDYIYVDATSQKIENPNEISRFVSDRHFGIGSDGLVLILPSEIADFKMRMFNSDGSEAEMCGNAIRCVGKFVYDKKMTDKSTITIETLAGIKVLEMTVENDKVVLVKVDMGEPILKAETIPVLSEKHPVIDEEITAKDYCYNFTCVSMGNPHAITYIENVSEFPLEKIGPLFEFHEKFPRKTNVEFVELIDDSTIKMRVWERGAGETLACGTGACAVLVASVLKGYVGRKATVKLLGGDLTIEWNESDNHIYMTGPATTVFEGEIDI", - "output": "cytoplasm ; diaminopimelate epimerase activity ; lysine biosynthetic process via diaminopimelate" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MGKVRHSPKEGYFGEFGGRYSPEILHDALAELETTYKKLKKNKHFKKELEYYRKNYIGRPSPLTYAERLTKVWDGARIWLKREDLNHTGAHKINNTIGQVLIAKAMGKTRIIAETGAGQHGVATATVGAMFQMETVVYMGEEDLRRQELNAIRMRMMGAKVVGVSSGTATLKDATSEAMRDWALNVSNTHYIVGSSIGPHPFPTIVRDFQSVIGIESRKQFKKVNGKLPNAVIACVGGGSNSIGMFYGFLRDKKVKLFGVEAGGYSTEPGHHSATIQFGRTGFLHGTKTLVIQDEFGQIVPAHSVSAGLDYPGVGPEHAYFHKSGRVTYVNVDDDGALDAFLEICQIEGIIPALETAHAFRFAKDLAKSMGKKEDILICLSGRGDKDVAEVARLRKGEFS", - "output": "tryptophan synthase activity" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MPRAPKRQRCMPEEDLQSQSETQGLEGAQAPLAVEEDASSSTSTSSSFPSSFPSSSSSSSSSCYPLIPSTPEEVSADDETPNPPQSAQIACSSPSVVASLPLDQSDEGSSSQKEESPSTLQVLPDSESLPRSEIDEKVTDLVQFLLFKYQMKEPITKAEILESVIRNYEDHFPLLFSEASECMLLVFGIDVKEVDPTGHSFVLVTSLGLTYDGMLSDVQSMPKTGILILILSIVFIEGYCTPEEVIWEALNMMGLYDGMEHLIYGEPRKLLTQDWVQENYLEYRQVPGSDPARYEFLWGPRAHAEIRKMSLLKFLAKVNGSDPRSFPLWYEEALKDEEERAQDRIATTDDTTAMASASSSATGSFSYPE", - "output": "cytosol ; nucleoplasm ; nucleus ; histone deacetylase binding ; negative regulation of transcription by RNA polymerase II" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MKLVLATNNKGKVKELAELLKPCGYQVVSIGEFPGFTEVEEDGNTFADNAIKKALAAAEFTGELALADDSGLEVDALKGAPGVYSARFAGEPKDDTANNAKLLSLLEGVPQDHRTARFRCVIAIAEPNGRIHTAEGSCEGVILRELKGEGGFGYDPLFYVPEYKQTFAELDMEKKNSISHRGKALKKAMEILNRLYIHQEV", - "output": "dITP diphosphatase activity ; ITP diphosphatase activity ; metal ion binding ; nucleotide binding ; ribonucleoside triphosphate phosphatase activity ; XTP diphosphatase activity ; nucleotide metabolic process ; purine nucleoside triphosphate catabolic process" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MTGSIEKPRLIVVMGPTAVGKTAAAIRLAKQWGGEIISADSMQVYRHMDIGTAKPTPDQQCRVPHHLIDIVNPDESFNAACFMERARAVIAELHKRGKKIIVVGGTGLYIRAVLGGLFDGPAADEALRRHYFTILEREGKAGLYGMLKARDRRAAAIIHPNDTTRMIRALEVLDLTGVSIVEQQQEHRFAQRPYRVLKIGLRCSRSVLYERIEARTEEMLAQGFLDEVRQLLDMGFHEGLRPMQALGYRQMVGFLKGELDLDEAVDQLKRETRRYAKRQLTWFGADPEIRWFEPGNEEEILRYAGRFLRGE", - "output": "ATP binding ; tRNA dimethylallyltransferase activity ; tRNA processing" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MIFSILEHILTHISFSVVSIVLTIYFLTLLVNLDEIIGFFDSLDKGIIITFFGITGLLFTRWIYSGHFPLSNLYESLIFLSWAFSIIHMVSYFNKKQQNHLNAITAPSAIFIQGFATSGLLNKMPQSAILVPALQSQWLMMHVSLMILGYGALLCGSLLSIALLVITFRKVGPTFWKKNIKKNFLLNELFSFDVLYYINERNSILLQQNITFSFSKNYYRYQLIQQLDYWSFRIISLGFIFLTVGILSGAVWANETWGSYWNWDPKETWAFITWTIFAIYLHIKTNRNVRGINSAIVASIGFLLIWICYFGVILLGIGLHSYGSFTSN", - "output": "chloroplast thylakoid membrane ; heme binding ; cytochrome complex assembly" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MQAPPPEHCPGVESEQAGQVSACAGCPNQSICSDPNKKREDPGKALVAAALKDVKHKLLILSGKGGVGKSTVTTLLTRYLARSYPDSNFGVLDIDICGPSQPRLMGALGENVHQSGSGWSPVGIDDNVCLMSIGFLLGSVDDAIIWRGPKKNGMIRQFLSEVDWGNLDLLLLDTPPGTSDEHLSVVSYLKDDSSPDSVHAIIVTTPQEVALLDVRKEINFCKKQQIPIVGVIENMSGFQCGHCGHSSEIFPAKTGGAAAMCAEMEVPLLGSLPLDPAIAKACDAGEDITSVKNPTTEALEGICSKIMSSFN", - "output": "cytosol ; 4 iron, 4 sulfur cluster binding ; ATP binding ; ATP-dependent FeS chaperone activity ; iron-sulfur cluster binding ; metal ion binding ; iron-sulfur cluster assembly" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MSSDSLKKRKPKVNRNEDGKRGRHDEQEGRYYSEEAEVDVRDPREDYQLYKDTCLDLQRLMSEIQDLKNKGGKDSAMEIEEKKVQSCVHFMTLKKLNRLAHIRLKKARDQTHEAKQKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIELVSVEEFYSEAPATISKPEITSTDSHQQTLSRLDWELEQRKRLAEKYKECLASKEKILKEIEIKKEYLNSLQPQLNSIMQASLPVQEYLSMPFDCMHKQYETARHLPPPLYVLFVQASAYSQACDRKLVVTIEGNVEEARALFKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLCVTLTLKCKEGSTLNLTFYFLMNLNILTVKVKIQPALELSTAISAGDLLNPDLILSCLYQGDDGKTTPNPANRYQFDKIGILSLNDYISELGHPYIWVQTMGGLHFPTDQPQPAVIADNALSASHMEKTINLLRARLLSRLSLHRQFASLEHGSIPVSLECQTLFPAKVISRLTKWNVITYEDYLALPYTKDVIECGLAKETDQYFYLLIERGTAKLNGVVVLNPGYCAVPPVFSLCLNWKGERSSSNDDNIRVMESEVNVYFKELCGPPPGFQLLTNQIQRLCMLLDVYLETERHDNSVEGPHEFPPEKICLRLLRGPSRTKPFKYNYPQGFFSHR", - "output": "cytoplasm ; nuclear speck ; RNA binding ; cell differentiation ; mRNA processing ; mRNA transport ; RNA splicing" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MAFNMHNRNLLSLMHHSTRELRYLLDLSRDLKRAKYTGTEQQHLKRKNIALIFEKTSTRTRCAFEVAAYDQGANVTYIDPNSSQIGHKESMKDTARVLGRMYDAIEYRGFKQEIVEELAKFAGVPVFNGLTDEYHPTQMLADVLTMREHSDKPLHDISYAYLGDARNNMGNSLLLIGAKLGMDVRIAAPKALWPHDEFVAQCKKFAEESGAKLTLTEDPKEAVKGVDFVHTDVWVSMGEPVEAWGERIKELLPYQVNMEIMKATGNPRAKFMHCLPAFHNSETKVGKQIAEQYPNLANGIEVTEDVFESPYNIAFEQAENRMHTIKAILVSTLADI", - "output": "cytoplasm ; amino acid binding ; ornithine carbamoyltransferase activity ; arginine biosynthetic process via ornithine ; arginine catabolic process to ornithine ; arginine deiminase pathway ; citrulline biosynthetic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAETLSSQ", - "output": "cytoplasm ; DNA binding ; phosphorelay response regulator activity ; phosphorelay signal transduction system ; regulation of DNA-templated transcription" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MIVSFRPTADLVDSIGVDVRSCDLQFRQFGGCSEFAGPISTVRCFQDNALLKSVLSQTSAGGVLVVDGAGSLHTALVGDVIAELAHSNGWAGLIVNGAVRDAAALRGIDIGIKALGTNPRKSTKIGTGERHVEVNLGGVTFVPGEVVYSDDDGIVVV", - "output": "4-hydroxy-4-methyl-2-oxoglutarate aldolase activity ; metal ion binding ; oxaloacetate decarboxylase activity ; ribonuclease inhibitor activity ; regulation of RNA metabolic process" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "CEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLDVFIYNLSRRFGQRGFSPREFRLTMTRGDIGNYLGLTVETISR", - "output": "cytoplasm ; 4 iron, 4 sulfur cluster binding ; DNA binding ; metal ion binding ; regulation of DNA-templated transcription" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MAGQGLPLHVATLLTGLLECLGFAGVLFGWPSLVFVFKNEDYFKDLCGPDAGPIGNATGQADCKAQDERFSLIFTLGSFMNNFMTFPTGYIFDRFKTTVARLIAIFFYTTATLIIAFTSAGSAVLLFLAMPMLTIGGILFLITNLQIGNLFGQHRSTIITLYNGAFDSSSAVFLIIKLLYEKGISLRASFIFISVCSTWHVARTFLLMPRGHIPYPLPPNYSYGLCPGNGTTKEEKETAEHENRELQSKEFLSAKEETPGAGQKQELRSFWSYAFSRRFAWHLVWLSVIQLWHYLFIGTLNSLLTNMAGGDMARVSTYTNAFAFTQFGVLCAPWNGLLMDRLKQKYQKEARKTGSSTLAVALCSTVPSLALTSLLCLGFALCASVPILPLQYLTFILQVISRSFLYGSNAAFLTLAFPSEHFGKLFGLVMALSAVVSLLQFPIFTLIKGSLQNDPFYVNVMFMLAILLTFFHPFLVYRECRTWKESPSAIA", - "output": "basolateral plasma membrane ; adenine transmembrane transporter activity ; fatty acid transmembrane transporter activity ; guanine transmembrane transporter activity ; xenobiotic transmembrane transporter activity ; hypoxanthine transport" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MKKKPYQIEIIQKKAPYHPDPTMIFNHLCESRSATLLLETAEVNKKKDLESIMIIDSAIRISSKKNLVKLKPLSINGEEILLALKKRIPKKIEIYEKNKNIILVFPKIEKNLDEDKKLFSLSVFDAFRFMIKIFENKEKKSKAMFFGGLFSYDLSQFFESLPKLKGNQKCSNFCFYLAETLLVLDHQKKTCLIQNSLFTKNANEKKRIKERSIEIEKKLNEKLKSIPKVKITDINLTSNMNNFEYGSIIKKLQKLIQKGEIFQVVPSRKFYLPCPNPLSAYQKLKKSNPSPYMFFMQDKDFTLFGASPESSLKYDEKTRKIELYPIAGTRPRGRTEDGNLDLDLDSRIELEMRTNHKELAEHLMLVDLARNDLARICKPGSRYVSDLVKVDKYSHVMHLVSKVIGELKEGLDALHAYASCMNMGTLTGAPKVRAMQLIAEYEKEKRGSYGGAIGYFTDLGNLDTCITIRSAYVENIATIQAGAGIVYNSIPEDEVNESLNKAQAVINAIKNAHY", - "output": "anthranilate synthase activity ; metal ion binding ; tryptophan biosynthetic process" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MKQYLDFLRLVKNTGTNKTDRTGIGTTSLFGYQMRFDLSDGFPLITTKRVHLPSVVHELLWFLSGATNIKYLQENGVRIWNEWADKNGDLGPIYGVQWRNWQNVRGESIDQIMQVIEQIKNTPDSRRIIVSAWNVGELENMALPPCHAFFQFYVALGKLSCQLYQRSADVFLGVPFNIASYALLTHMMAQQCDLEVGDFIWSGGDCHIYSNHTKQVEIQLARTPKTLATLKINNKPDSIFDYNFEDFEFINYVFDAYIKATVAI", - "output": "cytoplasm ; thymidylate synthase activity ; dTMP biosynthetic process ; dTTP biosynthetic process ; methylation" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MAKKSKQLRAALEKIDSTKAYSVEEAVALAKETNFAKFDATVEVAYNLNIDVKKADQQIRGAMVLPNGTGKTQRVLVFARGAKAEEAKEAGADFVGEDDLVQKINGGWLDFDVVIATPDMMAIVGRLGRVLGPRNLMPNPKTGTVTMDVAKAVEESKGGKITYRADKAGNVQTIIGKVSFDADKLVENFKAFNDVIAKAKPATAKGTYITNLVLTTTQGPGIKVDANSF", - "output": "large ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; tRNA binding ; regulation of translation ; translation" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MKRPKEPSGSDGESDGPIDVGQEGQLSQMARPLSTPSSSQMQARKKHRGIIEKRRRDRINSSLSELRRLVPTAFEKQGSSKLEKAEVLQMTVDHLKMLHATGGTGFFDARALAVDFRSIGFRECLTEVIRYLGVLEGPSSRADPVRIRLLSHLNSYAAEMEPSPTPTGPLAFPAWPWSFFHSCPGLPALSNQLAILGRVPSPVLPGVSSPAYPIPALRTAPLRRATGIILPARRNVLPSRGASSTRRARPLERPATPVPVAPSSRAARSSHIAPLLQSSSPTPPGPTGSAAYVAVPTPNSSSPGPAGRPAGAMLYHSWVSEITEIGAF", - "output": "chromatin ; cytoplasm ; nucleoplasm ; nucleus ; AF-1 domain binding ; DNA-binding transcription activator activity, RNA polymerase II-specific ; DNA-binding transcription factor activity ; DNA-binding transcription factor activity, RNA polymerase II-specific ; DNA-binding transcription repressor activity, RNA polymerase II-specific ; protein homodimerization activity ; RNA polymerase II cis-regulatory region sequence-specific DNA binding ; anterior/posterior pattern specification ; aortic valve morphogenesis ; atrioventricular valve morphogenesis ; cardiac epithelial to mesenchymal transition ; cardiac ventricle morphogenesis ; cellular response to BMP stimulus ; circulatory system development ; endocardial cushion morphogenesis ; epithelial to mesenchymal transition involved in endocardial cushion formation ; glomerulus development ; mesenchymal cell development ; negative regulation of androgen receptor signaling pathway ; negative regulation of DNA-binding transcription factor activity ; negative regulation of DNA-templated transcription ; negative regulation of gene expression ; Notch signaling involved in heart development ; Notch signaling pathway ; outflow tract morphogenesis ; positive regulation of neuron differentiation ; positive regulation of transcription by RNA polymerase II ; proximal tubule development ; pulmonary valve morphogenesis ; regulation of neurogenesis ; regulation of transcription by RNA polymerase II ; skeletal muscle cell differentiation ; ventricular septum morphogenesis" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MPTINQLVRKGRRDKVAKTKTAALKGSPQRRGVCTRVYTTTPKKPNSALRKVARVRLTSQVEVTAYIPGEGHNLQEHSMVLVRGGRVKDLPGVRYKIIRGSLDTQGVKNRKQARSRYGAKKEKS", - "output": "small ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; tRNA binding ; translation" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MAVYNYDVVVLGSGPAGEGAAMNAVKAGRKVAVVDNRPLVGGNCTHLGTIPSKALRHSVRQIMQYNTNPLFRQIGEPRWFSFPDVLKSAEKVISKQVTSRTSYYARNRIDTFFGTASFSDEQSVEVVCLNGMVEKLVANQFVIATGSRPYRPADIDFNHPRIYDSDTILTLSHTPRRMIIYGAGVIGCEYASIFSGLGVLVDLIDNREQLLSFLDDEISDALSYHLRNNNVLIRHNEEYERVEGLENGVILHLKSGKKIKADAFLWSNGRTGNTDKLGLENIGLKANSRGQVQVDEHYRTEIGNIYAAGDVIGWPSLASAAYDQGRSAAGSIVENDSWRFVDDVPTGIYTIPEISSIGKNERELTQAKIPYEVGKAFFKSMARAQISFEPVGMLKILFHRETLEVLGVHCFGYQASEIVHIGQAIMNQKGPANSIKYFVNTTFNYPTMAEAYRVAAFDGLNRLF", - "output": "cytoplasm ; flavin adenine dinucleotide binding ; NAD(P)+ transhydrogenase (B-specific) activity ; NADP metabolic process" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "METLTSRHEKRALHSQASAISQDREEKIMSQEPLSFKDVAVVFTEEELELLDSTQRQLYQDVMQENFRNLLSVGERNPLGDKNGKDTEYIQDEELRFFSHKELSSCKIWEEVAGELPGSQDCRVNLQGKDFQFSEDAAPHQGWEGASTPCFPIENFLDSLQGDGLIGLENQQFPAWRAIRPIPIQGSWAKAFVNQLGDVQERCKNLDTEDTVYKCNWDDDSFCWISCHVDHRFPEIDKPCGCNKCRKDCIKNSVLHRINPGENGLKSNEYRNGFRDDADLPPHPRVPLKEKLCQYDEFSEGLRHSAHLNRHQRVPTGEKSVKSLERGRGVRQNTHIRNHPRAPVGDMPYRCDVCGKGFRYKSVLLIHQGVHTGRRPYKCEECGKAFGRSSNLLVHQRVHTGEKPYKCSECGKGFSYSSVLQVHQRLHTGEKPYTCSECGKGFCAKSALHKHQHIHPGEKPYSCGECGKGFSCSSHLSSHQKTHTGERPYQCDKCGKGFSHNSYLQAHQRVHMGQHLYKCNVCGKSFSYSSGLLMHQRLHTGEKPYKCECGKSFGRSSDLHIHQRVHTGEKPYKCSECGKGFRRNSDLHSHQRVHTGERPYVCDVCGKGFIYSSDLLIHQRVHTGEKPYKCAECGKGFSYSSGLLIHQRVHTGEKPYRCQECGKGFRCTSSLHKHQRVHTGKKPYTCDQCGKGFSYGSNLRTHQRLHTGEKPYTCCECGKGFRYGSGLLSHKRVHTGEKPYRCHVCGKGYSQSSHLQGHQRVHTGEKPYKCEECGKGFGRNSCLHVHQRVHTGEKPYTCGVCGKGFSYTSGLRNHQRVHLGENPYK", - "output": "nucleus ; DNA-binding transcription activator activity, RNA polymerase II-specific ; metal ion binding ; RNA polymerase II cis-regulatory region sequence-specific DNA binding" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MQQLELYHIAFLGLAIVLEIIANIFLKMSDGFRKVWLGLLSLLSVLGAFSALAQAVKGIDLSVAYALWGGFGIAATIAAGWILFGQRLNAKGWIGLVLLLAGMVIIKLA", - "output": "plasma membrane ; spermidine transmembrane transporter activity ; response to chemical" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MNHSEQPFDVKEALLFSQRMAQLSKALWKSIEKDWQQWIKPYNLNINEHHILWIAYQLKGASISEIAKFGVMHVSTAFNFSKKLEERGFLKFSKKLNDKRNTYIELTPKGEETFHKLLEDYDPARTGIVKGAQPLHDIYGKFPEILEMMCIIRNIYGEDFMEIFEKSFSNIEKDFLNERGRVTKKSEELEDSADAAEKAAKANQIV", - "output": "DNA binding ; DNA-binding transcription factor activity ; negative regulation of DNA-templated transcription ; sporulation resulting in formation of a cellular spore" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MAAPESLRPRLCRLVRGEQGYGFHLHGEKGRRGQFIRRVEPGSPAEAAALRAGDRLVEVNGVNVEGETHHQVVHRIKAVEGQTQLLVVDKETDEELCRRQLTCTEEMAHRGLPPAHNPWEPKPDWACSGSLGSDTGHKDVNGPPRELRPRLCHLRRGPQGYGFNLHSDKSRPGQYIRSVDPGSPASLSGLRAQDRLIEVNGQNVEGLRHAEVVARIKAQEDEARLLVVDPETDEHFKRLRVVPTEDHVEGPLPSPVTNGTSLAQLNGGSVCSSRSDLPGSEKDNEDGSAWKRDPFQESGLHLSPTAAEAKEKARATRVNKRAPQMDWNRKREIFSNF", - "output": "apical plasma membrane ; cytoplasm ; endomembrane system ; nucleus ; plasma membrane ; protein-containing complex ; stereocilium ; stereocilium bundle ; beta-catenin binding ; identical protein binding ; low-density lipoprotein particle receptor binding ; molecular adaptor activity ; phosphatase binding ; protein-membrane adaptor activity ; signaling receptor binding ; inner ear development ; negative regulation of phosphatidylinositol 3-kinase signaling ; phosphatidylinositol 3-kinase signaling ; positive regulation of monoatomic ion transmembrane transport ; protein localization to plasma membrane ; sensory perception of sound" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MGHTKRNKTGVLLMNLGTPDAPTTSAVRRYLAEFLSDPRVVEIPRLLWLLILHGIILRIRPAKSAALYKGIWTEAGSPLLAISERQQAKLQGYLDEQQLTDKNGQAVSVHLAMRYGSPSVQQTMLQMHQAGIDNLVVLPLYPQYAAPTTASAFDAIAKTLSQWRYLPSLHFIHTYHDNDDYISALFASIKADFDTNGMPERLLLSYHGMPERNLHLGDPYYCFCMKTTRLVIEKMQQQGLVFDSDFVVTSFQSRFGKAKWLQPYTDVTLEALASEGVRKIAVACPAFSADCLETLEEIEQENREVFIHAGGESFRYISALNDNDDHIVMMANLVKPYL", - "output": "cytoplasm ; ferrochelatase activity ; metal ion binding ; heme biosynthetic process" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MSALTGKHVLVLGLGESGLAMARWCALRGARLRVADSRQTPPGLDTLRADAPLAEIVVGNFGAEVLSGIDLVALSPGVDPRIGIAAEARHRGLPLTGEMSLLAQALDELGVRAQTRILAITGTNGKTTTTALTAALAQAAGLDAVAAGNISPAALDVLMDRLAQGAPLPECWVLELSSFQIETMHALDPEAATVLNVTDDHLDRYAGLDEYAATKAAIFEGRGVQVLNRDDARVAAMALPGRSLIRFGASAPAATDDYGLVEVAGAAWLVRGRERLLALADLPLAGRHNAANTLAALALCEGGLGIAPQRLTGAVVAFRGLPHRVELVAERSDGVRFYDDSKGTNVGATVAALDGMDCPVVLIAGGDGKGQDFSPLREAVVRRARAVVLIGRDAPRIESALQGSAVALEHAPDLDAAVVRASEQAQPGDAVLLSPACASLDMFRNYAHRAEVFIAAARRLPEVRAS", - "output": "cytoplasm ; ATP binding ; UDP-N-acetylmuramoylalanine-D-glutamate ligase activity ; cell cycle ; cell division ; cell wall organization ; peptidoglycan biosynthetic process ; regulation of cell shape" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MNFETIIGLEVHVELNTNSKIFSPSSAHFGEDPNANTNVIDWSFPGVLPVMNKGVIDAGIKAALALNMDIHKEMHFDRKNYFYPDNPKAYQISQFDEPIGYNGWIEIKLEDGSTKKIRIERAHLEEDAGKNTHGTDGYSYVDLNRQGVPLIEIVSEADMRSPEEAYAYLTALKEIIQYTGISDVKMEEGSMRVDANISLRPYGQEQFGTKTELKNLNSFSNVRKGLEFEVERQAKLLRSGGVIRQETRRYDEANKGTILMRVKEGAADYRYFPEPDLPLYEIDDAWIDEMRAQLPQFPAQRRAKYEEELGLSAYDASQLTATKVLSDFFETAVSLGGDAKQVSNWLQGEIAQFLNAEGKTIEEIALTPENLVEMIAIIADGTISSKMAKKVFVHLAKNGGSARAYVEKAGLVQISDPAVLVPIIHQVFADNEAAVADFKSGKRNADKAFTGFLMKATKGQANPQVAQQLLAQELQKLRD", - "output": "asparaginyl-tRNA synthase (glutamine-hydrolyzing) activity ; ATP binding ; glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity ; translation" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MADYQGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLPEAVERHTGSLNDEWLMAADLIVASPGIALAHPSLSAAADAGIEIVGDIELFCREAQAPIVAITGSNGKSTVTTLVGEMAKAAGVNVGVGGNIGLPALMLLDAECELYVLELSSFQLETTSSLQAVAATILNVTEDHMDRYPFGLQQYRAAKLRIYENAKVCVVNADDALTMPIRGADERCVSFGVNMGDYHLNHQQGETWLRVKGEKVLNVKEMKLSGQHNYTNALAALALADAAGLPRASSLKALTTFTGLPHRFEVVLEHNGVRWINDSKATNVGSTEAALNGLQVDGTLHLLLGGDGKSADFSPLARYLNGDNVRLYCFGRDGAQLAALRPEVAEQTETMEQAMRLLAPRVQPGDMVLLSPACASLDQFKNFEQRGNEFARLAKELG", - "output": "cytoplasm ; ATP binding ; UDP-N-acetylmuramoylalanine-D-glutamate ligase activity ; cell cycle ; cell division ; cell wall organization ; peptidoglycan biosynthetic process ; regulation of cell shape" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MDVLSCSNNTLKGLYDISGVEVGQHFYWQIGGFQVHGQVLITSWVVIAILLGSASIAVRNPQTIPNDSQNFFEYILEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKLVELPHGELAAPTNDINTTVALALLTSVAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPSVVPIPVMFLGLFTSGIQALIFATLAAAYIGESMEGHH", - "output": "chloroplast thylakoid membrane ; plasma membrane ; proton-transporting ATP synthase complex, coupling factor F(o) ; proton-transporting ATP synthase activity, rotational mechanism" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MQHPHRCPECDGTIRETDTEHVCADCGLVVTDAPIDHGPEWRTFSDDPDHAPERTGAPLTRSRHDRGLSTEIGYSARLTGRKRRKFARLRRQHKRATIPSKADYNRIYGFTEIRRLIGTFGIGTGLRDQACTLFASAQTAGLLHGRTIEGFAAAGVYATCRTNGVTRTLDEIAAAARATRPELTTAYDAMNRDLGLPTGPIDPREYLPRYADALSLPARIERQARELVAALETDGLVAGRNPSGVAAGCLYTAATETDHAVTQSAAAAVADVTPVTLRATYQNLTDA", - "output": "transcription preinitiation complex ; DNA-binding transcription factor activity ; TBP-class protein binding ; zinc ion binding ; DNA-templated transcription initiation ; transcription preinitiation complex assembly" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MNGNCYKRIVIKLGTSLLTGGTGKLDHERMADLCRQIADLTRLGTEVIIVSSGAIAAGRAKMGLRHIPKDVPFKQVLAAIGQSQLMNYYDQLFSPHGLTVAQGLLTKSDLSDRSGYLNARNTLLALMELGVITIVNENDVVAVDEIQQAKFGDNDNLSAMVANLIEADLLLILTNIRGLYTADPTLHPDARLITEVKEITEELEKLAAGSSNKLGTGGMVTKLEAARLATSSGVNVIIADGHIPDIILKLASGETEGTRFMPSLHKPDSRQRWMMSGLCTRGNICIDDGAVKAIRENQKSLLAAGVQQSEGKFGRGDIVKLSDSRGKRLGYGITNYSSDDVSKIKGLHTDEINTVLAGNQGPEIIHRNNLVVI", - "output": "cytoplasm ; ATP binding ; glutamate 5-kinase activity ; RNA binding ; L-proline biosynthetic process ; phosphorylation" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MNRRNFIKAASCGALLTGALPSVSHAAAENRPPIPGSLGMLYDSTLCVGCQACVTKCQDINFPERNPQGEQTWSNNDKLSPYTNNIIQVWTSGTGVNKDQEENGYAYIKKQCMHCVDPNCVSVCPVSALKKDPKTGIVHYDKDVCTGCRYCMVACPYNVPKYDYNNPFGALHKCELCNQKGVERLDKGGLPGCVEVCPAGAVIFGTREELMAEAKKRLALKPGSEYHYPRQTLKSGDTYLHTVPKYYPHLYGEKEGGGTQVLVLTGVPYENLDLPKLDDLSTGARSENIQHTLYKGMMLPLAVLAGLTVLVRRNTKNDHHDGGDDHES", - "output": "periplasmic space ; 4 iron, 4 sulfur cluster binding ; metal ion binding ; oxidoreductase activity" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MQPSTATAAPKEKTSSEKKDNYIIKGVFWDPACVIA", - "output": "endoplasmic reticulum ; extracellular region ; plasma membrane ; mating pheromone activity ; pheromone-dependent signal transduction involved in conjugation with cellular fusion" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MIRLSKRSVSTLLRSGNQSFRIAAAASTSRSSPSATDVKRSDTESRWYSSLTNGQSKNSGSFAQLNMKTNWFMGYRNESSAAASDSSSQAPPPAEKFEYQAEVSRLMDLIVNSLYSNKEVFLRELISNASDALDKLRYLSVTNPELSKDAPDLDIRIYADKENGIITLTDSGIGMTRQELVDCLGTIAQSGTAKFMKALKDSKDAGGDNNLIGQFGVGFYSAFLVADRVIVSTKSPKSDKQYVWEGEANSSSFTIQEDTDPQSLIPRGTRITLHLKQEAKNFADPERIQKLVKNYSQFVSFPIYTWQEKGYTKEVEVEDDPTETKKDDQDDQTEKKKKTKKVVERYWDWELTNETQPIWLRNPKEVTTAEYNEFYRKAFNEYLDPLASSHFTTEGEVEFRSILYVPPVSPSGKDDIVNQKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSHDLPLNVSREILQESRIVRIMKKRLVRKAFDMILGISLSENREDYEKFWDNFGKHLKLGCIEDRENHKRIAPLLRFFSSQSENDMISLDEYVENMKPEQKAIYFIASDSITSAKNAPFLEKMLEKGLEVLYLVEPIDEVAVQSLKAYKEKDFVDISKEDLDLGDKNEEKEAAVKKEFGQTCDWIKKRLGDKVASVQISNRLSSSPCVLVSGKFGWSANMERLMKAQSTGDTISLDYMKGRRVFEINPDHSIIKNINAAYNSNPNDEDAMRAIDLMYDAALVSSGFTPDNPAELGGKIYEMMDVALSGKWSSPEVQPQQQQMAHSHDAETFEAEVVEPVEVDGKK", - "output": "chloroplast stroma ; cytosol ; mitochondrion ; perinuclear region of cytoplasm ; plant-type cell wall ; plasma membrane ; protein-containing complex ; ATP binding ; ATP hydrolysis activity ; ATP-dependent protein folding chaperone ; unfolded protein binding ; cellular response to heat ; protein folding ; protein stabilization" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MIQQETRLKVADNSGAREILTIKVLGGSGRKFANIGDVIVASVKQATPGGAVKKGDVVKAVIVRTKSGARRPDGSYIKFDDNAAVIIRDDKTPRGTRIFGPVARELREGGYMKIVSLAPEVL", - "output": "large ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MLAFCRSSLKSKKYFIILLALAAIAGLGTHAAWSSNGLPRIDNKTLARLAQQHPVVVLFRHAERCDRSTNQCLSDKTGITVKGTQDARELGNAFSADIPDFDLYSSNTVRTIQSATWFSAGKKLTVDKRLLQCGNEIYSAIKDLQSKAPDKNIVIFTHNHCLTYIAKNKRDATFKPDYLDGLVMHVEKGKVYLDGEFVNH", - "output": "periplasmic space ; phosphatase activity ; lipopolysaccharide metabolic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MQHKLLINGELVSGEGEKQPVYNPATGDVLLEIAEASAEQVNAAVRAADAAFAEWGQTTPKARAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDIFPAGVINVLFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTAPSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGSPDDESTELGPLSSLAHLERVSKAVEEAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTLFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVMVKH", - "output": "1-pyrroline dehydrogenase activity ; aminobutyraldehyde dehydrogenase activity ; NAD binding ; L-lysine catabolic process ; putrescine catabolic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MNHFPKLLSSQIGFDVAQTMLENFDRHYRIFREAAVEAKTLYEHGDWHGLQRLARERITSYDDRVKECVEVLEDEYDAENIDDEVWQQIKLHYIGLLTSHRQPECAETFFNSVCCKILHRSYFSNDFIFVRPAISTEYLENDEPAAKPTYRAYYPGTDGLATTLERIVTNFQLEPAFDDLPRDIGCVMQAIHDEFGHFDEAPNFQIHVLSSLFFRNKSAYIVGRIINADRVLPFAVPIRHVRPGVLSLDTVLLRRDQLMIIFGFSHSYFLVDMGVPSAYVDFLCTIMPGKPKAEIYTSVGLQKQGKNLFYRDLLHHLSHSSDRFIIAPGIKGLVMLVFTLPSFPYVFKIIKDHFPPPKETTRAQIMEKYQLVKRHDRLGRMADTLEYSSVALPIARLDHALVRELEKEVPSLLEYEDGNLVIEHLYIERRMTPLNLYLQNGSDSDVEHGVKEYGNAVKELMKANIFPGDMLYKNFGVTRHGRVVFYDYDEIEYLTDCNVRRVPPPRNEEDELSGEPWYTVGPHDIFPETYGPFLLGDPRVRDVFMKHHADFFDPALWQASKDKLIQGELPDFYPYDTALRFCTRYPARFGATDQNDGAGDAQRAA", - "output": "cytoplasm ; kinase activity ; ATP binding ; phosphoprotein phosphatase activity ; protein serine/threonine kinase activity ; glucose metabolic process ; glyoxylate cycle ; phosphorylation ; tricarboxylic acid cycle" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MVSTTLSVSRMTFVWRAARPSLLNHSLRKMSYQEGKPEPAKQALKKSKLPLGRFDSLEDSPEEREPLQKFPDDVNPVTKEKGGPKGPEPTRYGDWERKGRCIDF", - "output": "mitochondrial matrix ; mitochondrion ; enzyme activator activity ; cellular respiration ; innate immune response ; mitochondrial respiratory chain complex II assembly ; positive regulation of succinate dehydrogenase activity" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MAAKIIDGKTIAQQVRSEVAQKVQARVAAGLRAPGLAVVLVGSNPASQIYVASKRKACDEVGFVSRSYDLPETTSEAELLALIDTLNADNTIDGILVQLPLPAGIDNVKVLERIAPDKDVDGFHPYNVGRLCQRAPRLRPCTPRGIVTLLERYNIDTYGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKDLRHHVEHADLLIVAVGKPGFIPGEWIKEGAIVIDVGINRLENGKVVGDVVFDEAAARASYITPVPGGVGPMTVATLIENTLQACIEYHDPQGK", - "output": "methenyltetrahydrofolate cyclohydrolase activity ; methylenetetrahydrofolate dehydrogenase (NADP+) activity ; histidine biosynthetic process ; methionine biosynthetic process ; purine nucleotide biosynthetic process ; tetrahydrofolate interconversion" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MTQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN", - "output": "chloroplast thylakoid membrane ; photosystem II reaction center ; photosynthesis" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MTQKLQKIVLPPVYGPADFEARVYACWEQRQAFSPRARGSGTSDSEGCDGHSRQIEGGARTFVIAIPPPNITGVLHMGHCLNTVLQDIVIRYQRMAGACTLWIPGTDHAGIATQHVVERALRKEGIHKREVTREQFVARTQQIKDSHQDTIRMQLRKMGASCDWTCERFTLDAGMSASVREAFVTLYERGLLYRSMYLVNWCPRCGTALSDDEVFHQEKDGALYYVRYPLLPRTEEEGNGVPPPLGTAQVGETIIIATTRPETILADVAVAVHPDDARYQSLIGRKVCVPMVNRIVPIIADSYVAQDFGTGMVKITPAHDPNDWDIGTRHSLEAINMLNPDGSLNDQVPAAYRGLSCAQARIQIVADLQAHGLLSREERIVHSVGVCYRCEAVIEPYLSLQWFVKMKPLASQALAAWKRADVQFHPKKWENTYVRWLEHIRDWCISRQLWWGHRIPVWYCAQCAQQTVSRVDVQRCAHCGSADITQDPDVLDTWFSSWLWPFSTLGWPQETQKLRAFYPTSAVITAYDIIFFWVARMIMAGLEFTQTVPFRDVYLHGLVRDKQGRKMSKSLNNGVDPLHIIRTYGADALRFTLAFMCAQGQDVLIEMDSFKMGSRFANKVWNASRYILGNLEGRRVYAIAHVSLTELDRWIFHTFNETVQQVRTALEAYRFNDAAQAVYEFFWNSFCDWYVEASKCSFQKPDEQEKDRAASVLCTLLEETLRLLHPFLPFVTEEIYRSLSPSVHDTTQAIPSGAHALLMCAPYPVYVPSRVDARACAHIGAVQEIVRAVRTLRAACGIDPQKAVSVRLRPSSPAQDANAAAQVSCVHDPGAVARTYEELICVLAGISSLVYLESDAPKPQVAVATAGTGFELFLVTTEGIDRTMLCARLQKAWQKARQKVQQVERKLADAQFCTHAPEEVVTAERKKLAEARATCHTLAGYLADMNGKPGPLSDSD", - "output": "cytoplasm ; aminoacyl-tRNA editing activity ; ATP binding ; valine-tRNA ligase activity ; valyl-tRNA aminoacylation" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MEEIKVNVELREKAGVKGVLSAIRAEKKVPAVIYGGQKEPISVSITEKDLKAILKAGSNSVVTLSTPAGKETAIIKEVQYHVVKDTPNHVDFQRISLKEKIDVVVPLKLTGESADVKIYGALINQVLREVAIRALPTAIPHEIAVDISALTIHKAIHISDLSLSKDIEVLGDPERAIVHLMVPREEETVAAPADTAVQPESSSTKGKKDEDGALAKDKK", - "output": "ribonucleoprotein complex ; ribosome ; 5S rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MGDMKTPDFDDLLAAFDIPDPTSLDAKEAIQTPSEENESPLKPPGICMDESVSLSHSGSAPDVPAVSVIVKNTSRQESFEAEKDHITPSLLHNGFRGSDLPPDPHNCGKFDSTFMNGDSARSFPGKLEPPKSEPLPTFNQFSPISSPEPEDPIKDNGFGIKPKHSDSYFPPPLGCGAVGGPVLEALAKFPVPELHMFDHFCKKEPKPEPLPLGSQQEHEQSGQNTVEPHKDPDATRFFGEALEFNSHPSNSIGESKGLARELGTCSSVPPRQRLKPAHSKLSSCVAALVALQAKRVASVTKEDQPGHTKDLSGPTKESSKGSPKMPKSPKSPRSPLEATRKSIKPSDSPRSICSDSSSKGSPSVAASSPPAIPKVRIKTIKTSSGEIKRTVTRILPDPDDPSKSPVGSPLGSAIAEAPSEMPGDEVPVEEHFPEAGTNSGSPQGARKGDESMTKASDSSSPSCSSGPRVPKGAAPGSQTGKKQQSTALQASTLAPANLLPKAVHLANLNLVPHSVAASVTAKSSVQRRSQPQLTQMSVPLVHQVKKAAPLIVEVFNKVLHSSNPVPLYAPNLSPPADSRIHVPASGYCCLECGDAFALEKSLSQHYGRRSVHIEVLCTLCSKTLLFFNKCSLLRHARDHKSKGLVMQCSQLLVKPISADQMFVSAPVNSTAPAAPAPSSSPKHGLTSGSASPPPPALPLYPDPVRLIRYSIKCLECHKQMRDYMVLAAHFQRTTEETEGLTCQVCQMLLPNQCSFCAHQRIHAHKSPYCCPECGVLCRSAYFQTHVKENCLHYARKVGYRCIHCGVVHLTLALLKSHIQERHCQVFHKCAFCPMAFKTASSTADHSATQHPTQPHRPSQLIYKCSCEMVFNKKRHIQQHFYQNVSKTQVGVFKCPECPLLFVQKPELMQHVKSTHGVPRNVDELSSLQSSADTSSSRPGSRVPTEPPATSVAARSSSLPSGRWGRPEAHRRVEARPRLRNTGWTCQECQEWVPDRESYVSHMKKSHGRTLKRYPCRQCEQSFHTPNSLRKHIRNNHDTVKKFYTCGYCTEDSPSFPRPSLLESHISLMHGIRNPDLSQTSKVKPPGGHSPQVNHLKRPVSGVGDAPGTSNGATVSSTKRHKSLFQCAKCSFATDSGLEFQSHIPQHQVDSSTAQCLLCGLCYTSASSLSRHLFIVHKVRDQEEEEEEEAAAAEMAVEVAEPEEGSGEEVPMETRENGLEECAGEPLSADPEARRLLGPAPEDDGGHNDHSQPQASQDQDSHTLSPQV", - "output": "nucleus ; DNA binding ; insulin receptor substrate binding ; metal ion binding ; PH domain binding ; negative regulation of insulin receptor signaling pathway ; regulation of peptidyl-tyrosine phosphorylation" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MLERLNFIENKYEELSNKISDPSVMANQKEWQKLCKEHADLEIIVNTYREYKKAQEDLESDKEMLKEESDKELREMAQEEIKELTLKLEDLERELTILLLPKDPNDDKDVFIEIRAGAGGEEAALFASNLLRMYTRYAERKNWKVETISLNATDIGGFKEVTVAVKGKGAYSRLKYESGVHRVQRVPDTESSGRIHTSTATVAVLPEVDDVDININANDLRIDVYRASGHGGQCVNTTDSAVRITHLPTGLVVTCQDEKSQLKNKEKAMKVLKARLFEAAEAERAASIAEDRKSQVGTGDRSERIRTYNYPQGRITDHRIGLTLYKLETFLDGDIDEAIEALVTEDQAEKMKDLGRVN", - "output": "cytoplasm ; translation release factor activity, codon specific" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MAKDIKFSEEARRSMLRGVDTLANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDAFENMGAKLVAEVASKTNDVAGDGTTTATVLAQAMIREGLKNVTAGANPMGLRKGIEKAVVAAVEELKTISKPIEGKSSIAQVAAISAADEEVGQLIAEAMERVGNDGVITLEESKGFTTELDVVEGMQFDRGYASPYMITDSDKMEAVLDNPYILITDKKISNIQEILPVLEQVVQQGKPLLIIAEDVEGEALATLVVNKLRGTFNVVAVKAPGFGDRRKAMLEDIAILTGGEVITEELGRDLKSATVESLGRAGKVVVTKENTTVVEGVGSTEQIEARIGQIRAQLEETTSEFDREKLQERLAKLVGGVAVIKVGAATETELKERKLRIEDALNSTRAAVEEGIVAGGGTSLMNVYTKVASIVAEGDEATGINIVLRALEEPVRQIAINAGLEGSVVVERLKGEKVGVGFNAATGEWVNMLETGIVDPAKVTRSALQNAASVAAMFLTTEAVVADKPEPNAPAMPDMGGMGMGGMGGMM", - "output": "cytoplasm ; ATP binding ; ATP-dependent protein folding chaperone ; isomerase activity ; unfolded protein binding ; protein refolding" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MPHHDQLHRYLFDNLAVRGELVNASATYARILENHDYPAAVRALLGELLVATTLLTATLKFDGDITVQLQGDGPLKLAVINGNHRQEMRGVARLQGDIADGSSLKHMLGNGIMVITITPKEGERYQGVVALEGDTLSNCLEAYFMQSEQLPTRLFMFTGEQDGQPAAAGMLLQILPTQPNNVDDLTHLSHLTTTVTPQELFTLPANEVLYRLYNQEQVTLFEPQPIAFLCGCSRGRSASALMSLPPQQLEELLAERGSIDIHCDYCGSHYLFDRVDIDALRAGAQPDEAGQLH", - "output": "cytoplasm ; unfolded protein binding ; protein folding" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MSEDFYDVLGVSRNADGDDIKQAYRKKAAKYHPDVSDDPNAEEKFKKIKKAKEVLTDGEKRQMYDQLGHDRFQQAEKRGGVGGGGNSSGGSARGDPFGGMGGQGSPFGDIFEQFFGGGQGQRRQGNRPRQGQNLQTRVQLDLEEVYTGVEKQFTVRRPEKCPDCNGRGHPSDADVRTCPQCNGQGQTTTVRETALGRVQQTQTCPRCDGSGEMYTQTCSTCNGDGVTRQEATLSVDIPAGIRDGQTLRMEREGAPGDNGGPRGDLLIDVSVRDHPDFERDGDDLYYRLAISFPQAVFGSTVEVPTVNGETTLDISAGTQSGEEFRIRNEGIPHLRGRGTGDLYVQVQIVTPENLSQKQREALEAFAEAGGESVDVSQGFFEKIKSSF", - "output": "cytoplasm ; ATP binding ; heat shock protein binding ; unfolded protein binding ; zinc ion binding ; DNA replication ; protein folding ; response to heat" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MTDAQMADFGAAAQYLRKSEKERLEAQTRPFDIRTECFVPDDKEEFVKAKILSREGGKVIAETENGKTVTVKEDQVLQQNPPKFDKIEDMAMLTFLHEPAVLFNLKERYAAWMIYTYSGLFCVTVNPYKWLPVYNAEVVAAYRGKKRSEAPPHIFSISDNAYQYMLTDRENQSILITGESGAGKTVNTKRVIQYFASIAAIGDRGKKDNANANKGTLEDQIIQANPALEAFGNAKTVRNDNSSRFGKFIRIHFGATGKLASADIETYLLEKSRVIFQLKAERNYHIFYQILSNKKPELLDMLLVTNNPYDYAFVSQGEVSVASIDDSEELMATDSAFDVLGFTSEEKAGVYKLTGAIMHYGNMKFKQKQREEQAEPDGTEDADKSAYLMGLNSADLLKGLCHPRVKVGNEYVTKGQSVQQVYYSIGALAKAVYEKMFNWMVTRINATLETKQPRQYFIGVLDIAGFEIFDFNSFEQLCINFTNEKLQQFFNHHMFVLEQEEYKKEGIEWTFIDFGMDLQACIDLIEKPMGIMSILEEECMFPKATDMTFKAKLYDNHLGKSNNFQKPRNIKGKQEAHFSLIHYAGTVDYNILGWLEKNKDPLNETVVALYQKSSLKLMATLFSSYATADTGDSGKSKGGKKKGSSFQTVSALHRENLNKLMTNLRTTHPHFVRCIIPNERKAPGVMDNPLVMHQLRCNGVLEGIRICRKGFPNRILYGDFRQRYRILNPVAIPEGQFIDSRKGTEKLLSSLDIDHNQYKFGHTKVFFKAGLLGLLEEMRDERLSRIITRMQAQARGQLMRIEFKKIVERRDALLVIQWNIRAFMGVKNWPWMKLYFKIKPLLKSAETEKEMATMKEEFGRIKETLEKSEARRKELEEKMVSLLQEKNDLQLQVQAEQDNLNDAEERCDQLIKNKIQLEAKVKEMNERLEDEEEMNAELTAKKRKLEDECSELKKDIDDLELTLAKVEKEKHATENKVKNLTEEMAGLDEIIAKLTKEKKALQEAHQQALDDLQVEEDKVNSLSKSKVKLEQQVDDLEGSLEQEKKVRMDLERAKRKLEGDLKLTQESIMDLENDKLQLEEKLKKKEFDINQQNSKIEDEQVLALQLQKKLKENQARIEELEEELEAERTARAKVEKLRSDLSRELEEISERLEEAGGATSVQIEMNKKREAEFQKMRRDLEEATLQHEATAAALRKKHADSVAELGEQIDNLQRVKQKLEKEKSEFKLELDDVTSNMEQIIKAKANLEKVSRTLEDQANEYRVKLEEAQRSLNDFTTQRAKLQTENGELARQLEEKEALISQLTRGKLSYTQQMEDLKRQLEEEGKAKNALAHALQSARHDCDLLREQYEEETEAKAELQRVLSKANSEVAQWRTKYETDAIQRTEELEEAKKKLAQRLQDAEEAVEAVNAKCSSLEKTKHRLQNEIEDLMVDVERSNAAAAALDKKQRNFDKILAEWKQKYEESQSELESSQKEARSLSTELFKLKNAYEESLEHLETFKRENKNLQEEISDLTEQLGEGGKNVHELEKVRKQLEVEKLELQSALEEAEASLEHEEGKILRAQLEFNQIKAEIERKLAEKDEEMEQAKRNHQRVVDSLQTSLDAETRSRNEVLRVKKKMEGDLNEMEIQLSHANRMAAEAQKQVKSLQSLLKDTQIQLDDAVRANDDLKENIAIVERRNNLLQAELEELRAVVEQTERSRKLAEQELIETSERVQLLHSQNTSLINQKKKMESDLTQLQSEVEEAVQECRNAEEKAKKAITDAAMMAEELKKEQDTSAHLERMKKNMEQTIKDLQHRLDEAEQIALKGGKKQLQKLEARVRELEGELEAEQKRNAESVKGMRKSERRIKELTYQTEEDKKNLLRLQDLVDKLQLKVKAYKRQAEEAEEQANTNLSKFRKVQHELDEAEERADIAESQVNKLRAKSRDIGAKQKMHDEE", - "output": "cytoplasm ; cytosol ; muscle myosin complex ; myofibril ; myosin complex ; myosin filament ; myosin II complex ; sarcomere ; stress fiber ; Z disc ; actin filament binding ; ATP binding ; calmodulin binding ; microfilament motor activity ; myosin phosphatase activity ; protein kinase binding ; adult heart development ; ATP metabolic process ; atrial cardiac muscle tissue morphogenesis ; cardiac muscle cell development ; cardiac muscle contraction ; cardiac muscle hypertrophy in response to stress ; in utero embryonic development ; muscle contraction ; muscle filament sliding ; myofibril assembly ; regulation of ATP-dependent activity ; regulation of blood pressure ; regulation of heart contraction ; regulation of heart growth ; regulation of heart rate ; regulation of the force of heart contraction ; sarcomere organization ; striated muscle contraction ; ventricular cardiac muscle tissue morphogenesis ; visceral muscle development" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVIKSNDVREPFNEDKLRSGMLRALEKRPVSADDVEMALNHIKSQLRATGEREVPSKMIGNLVMEQLKKLDKVAYIRFASVYRSFEDIKDFGEEIARLQD", - "output": "ATP binding ; DNA binding ; zinc ion binding ; negative regulation of DNA-templated transcription" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MKYKRIVFKVGTSSITHSDGSLSRGKIQTITCQLAALHHAGHELVLVSSGAVAAGFGALGFKKRPVKIADKQASAAVGQGLLMEEYTANLSSDGIVSAQILLSRADFADKRRYQNAGGALSVLLQRRAVPIINENDTVSVEELKIGDNDTLSAQVAAMIQADLLVLLTDIDGLYTGNPNSNPDAVRLDKIEHINHEIIEMAGGSGSANGTGGMLTKIKAATIAAESGVPVYICSSLKPDALAEAAEHQADGSFFVPRAKGLRTQKQWLAFYSESRGSVYVDEGAEHALSEQGKSLLMSGIAGIEGHFSRMDTVTVYSKATKQPLGKGRVLFGSAAAEDLLKSRKAKGVFIHRDDWISITPEIRLLLTEF", - "output": "cytosol ; ATP binding ; glutamate 5-kinase activity ; RNA binding ; L-proline biosynthetic process ; phosphorylation ; proline biosynthetic process" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "METATLVAIFISCSLVSFTGYALYTAFGQPSKELRDPFEEHED", - "output": "chloroplast thylakoid membrane ; photosynthesis" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MQNQRIRIRLKAFDHRLIDQATAEIVETAKRTGAQVRGPIPLPTRKERFTVLISPHVNKDARDQYEIRTHLRLVDIVEPTEKTVDALMRLDLAAGVDVQISLG", - "output": "ribonucleoprotein complex ; ribosome ; structural constituent of ribosome ; tRNA binding ; translation" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MSMGLEITGTALAVLGWLGTIVCCALPMWRVSAFIGSNIITSQNIWEGLWMNCVVQSTGQMQCKVYDSLLALPQDLQAARALIVVAILLAAFGLLVALVGAQCTNCVQDDTAKAKITIVAGVLFLLAALLTLVPVSWSANTIIRDFYNPVVPEAQKREMGAGLYVGWAAAALQLLGGALLCCSCPPREKKYTATKVVYSAPRSTGPGASLGTGYDRKDYV", - "output": "apical junction complex ; apicolateral plasma membrane ; bicellular tight junction ; cell-cell junction ; cytoplasm ; lateral plasma membrane ; membrane ; plasma membrane ; protein-containing complex ; tight junction ; identical protein binding ; structural molecule activity ; transmembrane signaling receptor activity ; actin cytoskeleton reorganization ; bicellular tight junction assembly ; calcium-independent cell-cell adhesion via plasma membrane cell-adhesion molecules ; cell adhesion ; cell junction maintenance ; epithelial cell morphogenesis ; establishment of endothelial blood-brain barrier ; maintenance of blood-brain barrier ; negative regulation of cell migration ; negative regulation of cell population proliferation ; negative regulation of gene expression ; negative regulation of wound healing ; positive regulation of bicellular tight junction assembly ; positive regulation of cell junction assembly ; positive regulation of cell migration ; positive regulation of gene expression ; positive regulation of metallopeptidase activity ; positive regulation of protein phosphorylation ; positive regulation of wound healing ; regulation of cell morphogenesis ; regulation of membrane permeability ; regulation of transepithelial transport ; response to ethanol ; response to Gram-positive bacterium ; response to hypoxia" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MSMFCFQCQETAKGTGCILSGVCGKTPEVANMQDLLLFVVRGIAVYNQALRKDGRSSARADKFIFDALFTTITNANFDKHSIIEKIKKGLELKKDLSNQVTIEHAPDECTWYGDETEFEEKAQTVGVLRTSDEDIRSLKELVHYGIKGMAAYVEHAYNLGYENPEIFAFMQYALAELTREDITVDELITLTLATGNHGVQAMAQLDTANTSHYGNPEISEVNIGVRNNPGILVSGHDLKDIEELLQQTEGTGIDIYTHSEMLPAHYYPQLKKYKHLAGNYGNAWWKQKEEFESFNGPILFTTNCIVPPRPNATYKDRIYTTGATGLEGATYIPERKDGKQKDFSVIIEHARRCQPPVAIESGKIVGGFAHAQVIALADKVVEAVKSGAIRKFFVMAGCDGRMKSRSYYTEFAEKLPADTVILTAGCAKYRYNKLPLGDINGIPRVLDAGQCNDSYSLAIIAMKLQEVFGLKDINDLPIVYNIAWYEQKAVIVLLALLALGVKKIHLGPTLPAFLSPNVKQVLIDNFGIGGISTADEDIAKFLA", - "output": "cytoplasm ; 4 iron, 4 sulfur cluster binding ; hydroxylamine reductase activity ; metal ion binding" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MSRIGKRPIPIPNKVTVDIDGATVTVKGPKGTLQRTLPTAVAINKDGETLLVTRQDDSRTARERHGLCRTLVANMVEGVATGFQKRLDIQGVGYRAQAQGSKLVLNVGYSKPVEMEMPDGVSVAVENSTQVIVSGIDKEAVGNTAAKIREVRPPEPYKGKGIRYLGEVVRRKVGKAGGKGAKGGKGGKK", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MKYQQLENLESGWKWKYLVKKHREGELITRYVEASAAQEAVNLLLALENEPVRVNVWIDRHMNPALLNRMKQTIRARRKRHFNAEHQHTRKKSIDLEFMVWQRLAGLAQRRGKTLSETIVQLIEDAEHKEKYATQMTTLKQDLQALLGKK", - "output": "cytoplasm ; sequence-specific DNA binding ; cell cycle ; cell division ; regulation of DNA-templated transcription" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAANKNKAVEWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKEATA", - "output": "mitochondrial intermembrane space ; respirasome ; electron transfer activity ; heme binding ; metal ion binding" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MALNLQDKQAIVAEVSEVAK", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MKKGTVLNSEISSVISRLGHTDTLVVCDAGLPIPNSTARIDMALTQGVPSFMQVVDVVTREMQVEAAILATEIKQQNPQLHETLLTHLEQLQQHQGNTIKISYTTHEQFKKLTADSQAVIRSGECSPYANVILCAGVTF", - "output": "cytoplasm ; D-ribose pyranase activity ; intramolecular lyase activity ; monosaccharide binding ; D-ribose catabolic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MQIQLPMFQNSRVVVVGDVMLDRYWYGATSRISPEAPVPVVKVEQLEDRPGGAANVALNIAALGSAAVILGVTGKDEAAQSLAARMESAGILADFQEHETLPTITKLRVISRHQQLIRMDFEESFAGVPQEQLEKKVAGQLAGAGALVLSDYGKGALRDPQAFIQLARSKQIPVLVDPKGSDFEKYRGATLITPNLSEFEAVVGHCTSEAELVQRGLKLVEELELEALLVTRSEQGMTLLRAGRSELHLPAQAKEVFDVTGAGDTVISVLAAALAAGSEMGQAVALANIAAGIVVGKLGTASVSAPELRRAVQQEQGAGRGAMTVEQLKVALDDARAHGEKIVFTNGCFDIIHAGHVGYLDQARKLGDRLVVAINSDASVSRLKGPARPINPLERRMAVLAGLEAVDWVTWYEDDTPERLLEILKPDILVKGGDYSKEQVVGWEIVEGYGGEVRALDFLDNCSTTAIVEKIRKDQVK", - "output": "ATP binding ; heptose 7-phosphate kinase activity ; heptose-1-phosphate adenylyltransferase activity ; phosphotransferase activity, alcohol group as acceptor ; ADP-L-glycero-beta-D-manno-heptose biosynthetic process" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "XFEGRGGFGGRGGGDRGGRGXGGFGGG", - "output": "nucleolus ; ribonucleoprotein complex ; methyltransferase activity ; RNA binding ; methylation ; rRNA processing" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MSFKFEAEVRSAQGKGASRRLRHNGQVPAIIYGGKAEAVSIILDHDKVNNAQAHDAFYNEVLTIVVAGKEEQVKVQAIQRHPTKPKLVHLDFKRI", - "output": "ribonucleoprotein complex ; ribosome ; 5S rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MFKNTFQSGFLSILYSIGSKPLQIWDKKVRNGHIKRITDNDIQSLVLEIEGTNVSTTYITCPADPKKTLGIKLPFLVMIIKNLKKYFTFEVQVLDDKNVRRRFRASNYQSTTRVKPFICTMPMRLDDGWNQIQFNLSDFTRRAYGTNYIETLRVQIHANCRIRRVYFSDRLYSEDELPAEFKLYLPVQNKAKQ", - "output": "axonemal microtubule ; centriole ; ciliary basal body ; cilium ; motile cilium ; nucleoplasm ; cilium assembly ; positive regulation of cell motility ; positive regulation of feeding behavior ; protein polyglutamylation ; regulation of cilium beat frequency involved in ciliary motility" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MIHCKVQQWSPQYLRLPATGYEELTLTLNTSMLARMPEEEDQLFLVVGDSPSSTYVDWGEDCNSTRYPSYDHCTHKILYLGASAGTTRSKRLSATIGIRLSKGTGSNNVLGTPMYLLYNEMKTRIIESSK", - "output": "methyltransferase activity ; methylation" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MEPPAIPHITEGFYPLPEIVETFSHHVLQELVSLAEVLPSMSNVEKKKKILDWLLRSRAFTMRLLVLARWVHLSPSVHRCIDVVAFLQGQKFCFQNLVHVLQDIRYQLSFARLRNSDLVTALDILSTGTSLRLANAPTSKLYMLSESPLSTKQILQTLHALNMLIRIRLSLYEIIPTPFQHFTIANGRCTFTVPNEFSVSLTTNSQDPKSTGISFQWIVVDFQFHLPDFSSTPAKYRVFIELHLNEEIAAAFVLQKPILPLIYNILHKFCLYQRLNLLSQQTFQLSRESWLGHLRGVYDEKPPRLRLYYWPQLNVKKEGKPGKIGHYIHIFVNTQPISAFERTLSSKRSSCEYDHFLLLVEWHHDGIVEHVPLDDHMDAQHLLLLITQKHAQLILEQIRKELHPNIFSEHVGGGLKIHVFDNEIIVKVNSVTGRLVLSSSASPLSPPRHLRAAEKNIALNTQPPAQILNRLYFFCIQTQLLEVAQCAELHAVQGYYSFPYLTFSKGKWRKDGDSLWVLAYNVESNSWSVRLLNAAGQTLYTQDVHTTKGTLSIESFSRLSYLLEVQILLFNVQTACQARGMPFEYLPIPPKALIEDDFTTYVQTGCLCIMMPSSNEDMLPVVFVRAHDGQLIFDSRIKGKLPYQSETETEKNCYIDWRTGRITIRVQNFSSFEKTWIGLLKLVALSKTSAFNVDCITLKHVDFTYLDDEKFRATIHDDNTFTLHFFNRHSPFHLISQFLQDTFSDGPSAIQPLRVIMDRTRGVLVAQELGYVVLARSLRQYRIILSKNHGIQVLLNRHGCILQDLSYLSADSRYLEGTQTLTSQWEPCSWLNTVWEGDLGDDELNGQIEAAPEMHLIKMNKTADLTAILKRILAISRKK", - "output": "core mediator complex ; cytosol ; mediator complex ; nucleus ; transcription coactivator activity ; transcription coregulator activity ; positive regulation of transcription initiation by RNA polymerase II ; regulation of transcription by RNA polymerase II" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MVSSILKFVILIHSTFHSTFAQNLPDTTVAPKTKRTIKIGIAAAQRTQTSSIGWSVCGGAVPMAIERLREFGYVKDFDFEFIVDYTECDQGSVVRAGIEFIKTHKVDVIIGPPCAQALRVMSFLAENYKKPVLGWGFVSDTDLSDVIRFPYLTTVIPNSLMLGYAASKMLTVYNWGRVAMLYYYSDIKYCSGVMNDVEATFNNPSTPNVNIVIKAEIYLNDNETTDIVFQSVKSRARIIFWCTQTAIEKRDYLIKIATHDMIGDEYVHIMLSMRNIAFGAQTSLGKPTFSQSGLTPIWESFTEGTDDFEKMVKQAATRMFVLDVNSEVADKKYLDYLQKNIMKAVQSPPMNCSTVECMTANTTIMGGYARQLFDVVYLYGVALTNTNSTDPAVYDDVDVIVPQFVTSFQGMTGKVVISPNLTRMPIFQLYGLNSDYEQVALAEFTYIDPIMNVTLSYKEEGGAVWYFYGNSRPLDIPICGFLGKFCPISFWEQYMILAIVSISVIVLMVIIMIIGCLCVISAKHAEQARTNAEWQVPFVNLMESEKQIRSNATSRRSLQSAPSISTGHSGVTTVSDFCENYTMMMYEKEMVLTAKYQYTHLTKADKERFVKMRKLDHENINRFIGLSIDSAHFIAVTKLCSRGSLQDILSRGNFSMDYFFMFCIIRDVAKGLEYLHKTFLRLHGNLRSATCLVNDSWQVKLAEYGMDNLVEEQTPPKKRLLWVAPEVLRGSLSVSQMEPSADIYSFAIIASEILTKKEAWDILDRKEDCEALIALVKDCWAEVPEDRPTAENICSQMKGLVSKQKTNLMDHVFNMLEEYTSTLEEEIEERTKELTLEKKKADILLSRMLPKQVAERLKAGQTVEPEGFDSVTVFFSDVVKFTILASKCSPFQTVNLLNDLYSNFDTIIEQHGVYKVESIGDGYLCVSGLPTRNGYAHIKQIVDMSLKFMEYCRSFKIPHLPRENVELRIGVNSGPCVAGVVGLSMPRYCLFGDTVNTASRMESNGKPSLIHLTSDAHLLLLTHYPNHYDTSSRGEVIIKGKGVMETFWVHGRIDDIAEPTELRSICKPSTVANERWITPPAPKPEIRSVSSHGSRPPSVYDPLQDHRKFKMDTLKVAN", - "output": "plasma membrane ; ATP binding ; GTP binding ; guanylate cyclase activity ; peptide receptor activity ; protein kinase activity ; cGMP biosynthetic process ; chemosensory behavior ; chemotaxis ; intracellular signal transduction ; protein phosphorylation ; receptor guanylyl cyclase signaling pathway ; response to metal ion" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MKLHELKPAEGSRKVRNRVGRGIGSGNGKTAGKGHKGQNARSGGGVRLGFEGGQTPLFRRLPKRGFTNINRKEFAIVNLSTLNRFEDGTEVTPELLLETGVISKLNDGVKILASGAVEKKLTVKAHKFSSSAKEAIEAAGGSVEVI", - "output": "large ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MRVLTGLQPSGDLHIGNYFGAIKQMVDAQEKSQMFMFIANYHAMTSSQDGEKLKQNSLKAAAAFLSLGIDPQKSVFWLQSDVKEVMELYWILSQFTPMGLLERAHSYKDKVAKGLSASHGLFSYPVLMAADILLFDTRIVPVGKDQIQHVEIARDIALKVNNEWGEIFTLPEARVNEEVAVVVGTDGAKMSKSYQNTIDIFSSEKTLKKQISSIVTDSTALEDPKDHENCNIFKIAKLFLDESGQKELQIRYEKGGEGYGHFKIYLNELVNAYFKEAREKYNELLEKPSHLKEILDFGATKARKIAQEKMQKIYEKIGL", - "output": "cytoplasm ; ATP binding ; tryptophan-tRNA ligase activity ; tryptophanyl-tRNA aminoacylation" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MPSQLEALRRHTVVVADTGDFEAMRALRPTDATTNPSLILKAVQQEAYRPLLVQTARAHQGASPAEITDRLLVAFGRQILDIVPGRVSTEVDARLSFDTRATVERARGLIALYQAAGVPRERVLIKIASTWEGIQAARVLQAEGIRCNLTLLFCLPQAAACADAGVQLISPFVGRIYDWHKKNAGAEWVEDARRGANDPGVQSVSRIYRYYKRFGIETEIMGASFRNVDQILALAGCDLLTISPELLTRLSQTEGEVPAALSPQAGHDDADAVRLDGGEVAFRTQLNEDAMASEKLSEGIRLFVADARKLDALIESHGAA", - "output": "cytoplasm ; transaldolase activity ; carbohydrate metabolic process ; pentose-phosphate shunt" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MGEEQSTVSGSGGARASGGGSAGQPESPRPRGDRVRTAGPRAAASSSRPNGGGGGRDPGCVDASVQEPASNRAPAGQPARLPLSGPLDPQSLELQLEREAEGAGPREAPPGQQPPDGLLLDVLAQRHPPPAKPQVLCSVYCVESDLPEAPSAESPSPSESPPQAPLGPIPASPPPSFPSSPLSLPADPLSPDGGSIELEFYLAPEPFSVPGLLGAPPYSGLGGVGDPYAPLMVLMCRVCLEDKPIKPLPCCKKAVCEECLKIYLSSQVQLGQVEIKCPVTECFEFLEETTVVYNLTHEDSIKYKYFLELGRIDSSTKPCPQCKHFTTFKKKGHIPTPSRSESRYKIQCPTCQLIWCFKCHSPWHEGVNCKEYKKGDKLLRHWASEIEHGQRNAQKCPKCKIHIQRTEGCDHMTCSQCNTNFCYRCGERYRQLRFFGDHTSNLSIFGCKYRYLPERPHLRRLVRGSVCAGKLFIAPLILVLGLALGAIAVVIGLFVFPIYCLCKKQRKRSRTGMHW", - "output": "cytoplasm ; membrane ; ubiquitin ligase complex ; metal ion binding ; ubiquitin conjugating enzyme binding ; ubiquitin protein ligase activity ; positive regulation of proteasomal ubiquitin-dependent protein catabolic process ; protein polyubiquitination ; ubiquitin-dependent protein catabolic process" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MERQNIRIRLKAFDHRALDMSAKEIVNTAKRTGAEVRGPVPLPTRIERFTVNRSPHIDKKSREQFEIRTHTRILDIVDPTPQTVDALMKLDLSSGVGIEIKLEGAR", - "output": "ribonucleoprotein complex ; ribosome ; structural constituent of ribosome ; tRNA binding ; translation" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MAIKKITIVGAGRVGEATAQFLVKNELCRELVLLDAQEGVAQGAALDIQQSAPLFDFDARVTGSTNYELIADSDLVVITAGKPRKPGMSRSDVLDSNLPIITDIMNNVMRFAPQSLVMIVTNPVDVLTYHAWRHCGWDRARVFGQAGVLDSARMASFIAGETGLSVKDISAMVLGGHGDTMLPLIRYTTISGIPLTHFLDQQVIEKIIERTRHGGFEILRLRQTSSAYDAPAAAIAGMVDAIRHNRKRILPCVAILQGEYGENEVAMGVPSVLGGDGLERIVELPLTEEEQEQFKHSVEAIRTDLAHLARA", - "output": "L-malate dehydrogenase activity ; carboxylic acid metabolic process ; tricarboxylic acid cycle" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MGNCNGASKSNQPDSSRVTQPAAEFRRVAHSSLYGRYNCKCCWFADTNLITCNDHYLCLRCHQVMLRNSDLCNICWKPLPTTITVPVEPTAPPP", - "output": "host cell perinuclear region of cytoplasm ; host cell plasma membrane ; membrane ; virion component ; RNA binding ; zinc ion binding ; viral budding from plasma membrane ; viral budding via host ESCRT complex" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MAWSQVEISKPHLAYAIIGGFTSLFMLCSLIIKEKLFLGEATMATATGLIFGPYVAKLFVPTSWGNTDYITEELARVLLVVEVFAAGAELPRAYMLRHWRSMFVMLLPVMIFGWLVSTGFMYALIPRLSFLESLAIAACITATDPVLASSIVGKGKFARRVPGHLRNMLLAESGCNDGMAIPFLYLAIYLIIEKPARHAGRDWVCIIILYECTFGCVLGAIIGVIARKMIKFSERRGLMDRESFLVFYFVLALFCGGIGTIIGVDDLLVSFCAGAAFSWDSWFSKKTEESHVSNVIDLLLNLSFFVYVGAIMPWPQFHMPHMDLSVWRLVVLAICILIARRIPAVLLFKSFVPDIINWREALFAGHFGPIGVGALYTCLVARAELEVHSTVPEPNDAIENPEIPNWYCIQVMWPVVCFLVLSSIIVHGSSIAFFMLGKRINTLALSFTRTRDSHFAFNLPRVRQGQSLPIKRVDALRSSANSIASSIRRRHPVNIQEDEDADISTVSLPEAAHLREERAESPRGGHYDAEEFPSEDYESRQPRRSNEEDREEEMNPGDETYLIGEDLVVEDSQGNIISHTSSRDANGPSIDEKLAQGDPKAKSFGRKFRSFLRRSYDTFQRNLHEPDDERQREPTLGHIESSIENHRPRYSRQNSESHLRENSVERRRREQVLTNIGDSESEDDNIPRPGIVPFYNENNESSSDTRNGLLSDNVSESRSRRPSRAPSAAVSSEGSPVEEDNEAQHRPNIRFLELTRAWE", - "output": "plasma membrane ; sodium:proton antiporter activity ; intracellular potassium ion homeostasis ; sodium ion export across plasma membrane ; sodium ion transmembrane transport" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "METQNTGTEDGFTPVTHRGGRRAKKRQAEQSSAAGQDGDAGRMDTEEARPAKRPVFPPLSGDQLLTGKEETRKIPVPANRYTPLKENWMKIFTPIVEHLGLQIRFNLKSRNVEIRTCKDTKDVSALTKAADFVKAFVLGFQVEDALALIRLDDLFLESFEITDVKPLKGDHLSRAIGRIAGKGGKTKFTIENVTRTRIVLADVKVHILGSFQNIKMARTAICNLILGNPPSKVYGNIRAVASRSADRF", - "output": "nucleolus ; small-subunit processome ; RNA binding ; ribosomal small subunit biogenesis" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MDKFRVQGPTKLQGEVTISGAKNAALPILFAALLAEEPVEIQNVPKLKDVDTSMKLLSQLGAKVERNGSVHIDARDVNVFCAPYDLVKTMRASIWALGPLVARFGQGQVSLPGGCTIGARPVDLHISGLEQLGATIKLEEGYVKASVDGRLKGAHIVMDKVSVGATVTIMCAATLAEGTTIIENAAREPEIVDTANFLITLGAKISGQGTDRIVIEGVERLGGGVYRVLPDRIETGTFLVAAAISRGKIICRNAQPDTLDAVLAKLRDAGADIEVGEDWISLDMHGKRPKAVNVRTAPHPAFPTDMQAQFTLLNLVAEGTGFITETVFENRFMHVPELSRMGAHAEIESNTVICHGVEKLSGAQVMATDLRASASLVLAGCIAEGTTVVDRIYHIDRGYERIEDKLRALGANIERVKGE", - "output": "cytoplasm ; UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity ; cell cycle ; cell division ; cell wall organization ; peptidoglycan biosynthetic process ; regulation of cell shape ; UDP-N-acetylgalactosamine biosynthetic process" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MFDKTQTIADFDPDVWQAIVDEGVRQEEHIELIASENYTSPLVMVAQGSKLTNKYAEGYPSKRYYGGCEYVDKVEELAIERAKALFGADYANVQPHSGSQANSAVYAALCAPGDTVLGMSLDHGGHLTHGAKVNFSGKMYNAVQYGLNPETGLVDYEEIAALAREHKPKMIVAGFSAYSQVLDWQKFRDIADEVGAYLMVDMAHVAGLVAAGVYPSPVQIADVTTTTTHKTLRGPRGGIILAKANPEIEKKLNSAVFPGGQGGPLMHVIAGKAISFKEAMSDEYKAYQQRVVDNAKTMAATFIKRGFKIVSGGTENHLMLVDLIGKDYSGKDADAALGAANITVNKNAVPNDPRSPFVTSGLRVGTPAITTRGFGETEVVDLTNWMCDVLESLEAGNSEAVIADVKAKVLDVCGKFPVYGSN", - "output": "cytoplasm ; glycine hydroxymethyltransferase activity ; pyridoxal phosphate binding ; glycine biosynthetic process from serine ; tetrahydrofolate interconversion" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MTQPNEFKHISVLLDECIEALAIKPNGIYIDATFGRGGHSAHILDALGEKGRLIAFDRDPQAIKAAERFADDKRFSIIHSPFGDMAEEIEALGLTGKIDGVLMDLGVSSPQLDDAERGFSFLRDGPLDMRMDTSRGQSAADWLASAEEQDITQVIKEFGEEKFGKRIAHAIVNTRKDTPITRTAQLAKIIDEAVPVKDKFKHPATRAFQGIRIYINAELEQLRVGLKAATQVLAKEGRLAVISFHSLEDRLVKRFIKDQSKGKVVPHNLPITQAEIDADKVLKALGKAIKPSEQEIANNVRSRSSVLRVAEKL", - "output": "cytoplasm ; rRNA (cytosine-N4-)-methyltransferase activity ; rRNA base methylation" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MNSGYNPGNANHITSHSNRTKNGVPTIPQPALMASNAILTIGPYKHRKDLIRESVLTKYQIIGYIAAGTYGKVYKAKSKTNGNSNSNSALMNDNVISIGNGQKEAGLQKTNNESMEDKNQLFAIKKFKSDNHSNKNNHDINGNEVIHYTGISQSAIREMSLCRELSNKNITKVVDILLENKSIYMVFEYCEHDLLQIIQYHSHPDVKPIPDFTIKSITWQILNGVTFLHKNWIFHRDLKPANIMVSSSGVVKIGDLGLARKFNNPLQSLYTGDKVVVTIWYRAPELLLGARHYTPSIDLWAVGCILAELLSLRPIFKGEEAKIDMNNKKSVPFQKNQLQKIVEVLGTPTTKNWPTITKYPEYSAFQQHFSNTYPPNLISWYKLIGRTSKQCLNLLRCLLEYDPTIRITADDALTHAFFLELPKMSENSFEGLSQKYPKRRIYTHENDIVSNSQHVNNKRHGYDDNMTRKRQR", - "output": "nucleus ; ATP binding ; cyclin-dependent protein serine/threonine kinase activity ; metal ion binding ; protein serine kinase activity ; RNA polymerase II CTD heptapeptide repeat kinase activity ; protein phosphorylation" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MGVRAQQKEKTRRSLVEAAFSQLSAERSFASLSLREVAREAGIAPTSFYRHFRDVDELGLTMVDESGLMLRQLMRQARQRIAKGGSVIRTSVSTFMEFIGNNPNAFRLLLRERSGTSAAFRAAVAREIQHFIAELADYLELENHMPRAFTEAQAEAMVTIVFSAGAEALDVGVEQRRQLEERLVLQLRMISKGAYYWYRREQEKTAIIPGNVKDE", - "output": "cytoplasm ; DNA binding ; DNA-binding transcription factor activity ; fatty acid biosynthetic process ; negative regulation of fatty acid biosynthetic process" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MTSPSPTARRTRLRRRTALALAAAATAALTLSACGTDTKANTPATRAGSGNAAAAKADTVALLDDTTLAVPGDKPSALFFFSVGCGECAGGAKSLDKAAQAFDKAGKKANFLAVDMDPNESKQTIMQFLDYIKAPALPATIDKGAALSQRYQVAALSTLIVVAPQGKVTYRATDPSADQIQDALKKAGA", - "output": "extracellular region ; response to mercury ion" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MKIINILFCLFLLMLNGCNSNDTNNSQTKSRQKRDLTQKEATQEKPKSKEELLREKLNDNQKTHLDWLKEALGNDGEFNKFLGYDESKIKSALDHIKSELDSCTGDKVENKNTFKQVVQEALKGGIDGFENTASSTCKNS", - "output": "cell outer membrane" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MEKKVQKLHDKKNIALVAHDNMKDPLCKWAKKHSFKLSAHQLYATGTTGHKLEEATGLSIRKCVSGPLGGDQQIGAKISEGEIDILIFFWDPFEPMPHDPDVKALLRIAAVWNIPVACNPASADFIISSQYINEEYERLVPDYDAYIAKRLG", - "output": "methylglyoxal synthase activity ; methylglyoxal biosynthetic process" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MTALPATSIAAPSLDDLDALNAHLETLRADERVAWALQHGPQQAALSSSFGAQSAVTLHLLTQQRPDIPVILIDTGYLFPETYRFADALTERLSLNLQVYRPLVSRAWMEARHGRLWEQGMVGIDQYNNLRKVEPMRRALDELNVGTWFTGLRRSQSGGRAQTPIVQKRGDRYKISPIADWTDRDVWQYLQAHALPYHPLWEQGYVSIGDFHTTRRWEPGMREEDTRFFGLKRECGIHEDI", - "output": "cytoplasm ; phosphoadenylyl-sulfate reductase (thioredoxin) activity ; hydrogen sulfide biosynthetic process ; sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MSDVDADEARKMAERERKKEEVRKRLEEASRMKKAKKGFLTPERKKKLRKLLMMKAAEDLKQQQMLKEQERQRILQERIIPLPDLDNEDDLEAVYDEIRERLIDLESENYDVSYIVRQKDFEINELTIAVNDLRGKFVKPTLKKVSKTEGKFDKLKKKEATKVDFRAQLKVVDKNEFALDEEDTEKKEKAAWAK", - "output": "sarcomere ; troponin complex ; actin binding ; troponin C binding ; embryo development ending in birth or egg hatching ; muscle contraction ; pharyngeal pumping" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MIGLADYLILGALLFSLGVAGIFINRKNLLVLLMCIELILLAVNMNFIAFSAYLQDLAGQVFVFFILTVAAAEAAIGLAIVVALFRNRGSINVGDLDSMKG", - "output": "plasma membrane ; NADH dehydrogenase (quinone) activity ; quinone binding ; ATP synthesis coupled electron transport" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MTASPSKLAQLRDLSVVVADTGDYDAIKRLKPVDCTTNPTLVKKALDLPVYADLIERELAWGRAHGGEDRNSTINEVADRLTVGVGTMLSELVPGRVSTEVDADLAHDTQATIAKARKFIAMYAERGVSKDKILIKIAATWEGIEAARQLQQEGIDCNLTLIFNRSQALACAEAGVFLISPFVGRILDFFVAKGQTPASIDEDPGVVFVRGVYDEFKRRGSSTVVMGASFRSTAQIEALAGCDRLTISPDLLEKLDADHGDLPRKLSPLNADNAAITPINSDSFATDLAADDMATEKLASGIDTFAKDLEALRKTIADKLAG", - "output": "cytosol ; transaldolase activity ; carbohydrate metabolic process ; pentose-phosphate shunt" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MTMGDMKTPDFDDLLAAFDIPDMVDPKAAIESGHDDHESHIKQNAHVDDDSHTPSSSDVGVSVIVKNVRNIDSSEGVEKDGHNPTGNGLHNGFLTASSLDSYGKDGAKSLKGDTPASEVTLKDPAFSQFSPISSAEEFEDDEKIEVDDPPDKEEARAGFRSNVLTGSAPQQDFDKLKALGGENSSKTGVSTSGHTDKNKVKREAESNSITLSVYEPFKVRKAEDKLKENSEKMLESRVLDGKPSSEKSDSGIAAAASSKTKPSSKLSSCIAAIAALSAKKAASDSCKEPVANSREASPLPKEVNDSPKAADKSPESQNLIDGTKKASLKPSDSPRSVSSENSSKGSPSSPVGSTPAIPKVRIKTIKTSSGEIKRTVTRVLPEVDLDSGKKPSEQAASVMASVTSLLSSSASATVLSSPPRAPLQTAMVTSAVSSAELTPKQVTIKPVATAFLPVSAVKTAGSQVINLKLANNTTVKATVISAASVQSASSAIIKAANAIQQQTVVVPASSLANAKLVPKTVHLANLNLLPQGAQATSELRQVLTKPQQQIKQAIINAAASQPPKKVSRVQVVSSLQSSVVEAFNKVLSSVNPVPVYTPNLSPPANAGITLPMRGYKCLECGDAFALEKSLSQHYDRRSVRIEVTCNHCTKNLVFYNKCSLLSHARGHKEKGVVMQCSHLILKPVPADQMIVPPSSNTAASTLQSSVGAATHTVPKVQPGIAGAVISAPASTPMSPAMPLDEDPSKLCRHSLKCLECNEVFQDEPSLATHFQHAADTSGQQMKKHPCRQCDKSFSSSHSLCRHNRIKHKGIRKVYACSHCPDSRRTFTKRLMLERHIQLMHGIKDPDVKELSDDAGDVTNDEEEEAEIKEDAKVPSPKRKLEEPVLEFRPPRGAITQPLKKLKINVFKVHKCAVCGFTTENLLQFHEHIPQHRSDGSSHQCRECGLCYTSHGSLARHLFIVHKLKEPQPVSKQNGAGEDSQQENKPSPEDEAAEGAASDRKCKVCAKTFETEAALNTHMRTHGMAFIKSKRMSSAEK", - "output": "nucleus ; DNA binding ; metal ion binding" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MWQIRASAGCHSSPGKDKEVTLENTMNFSDIYHSDEEYFRKLKDLRAAHAEAMVKLEKMYQDKLTMKDIQAALVGDDSSSSASEKSCSHPALSATSLSEPDLDRSSSLSTTTDELPDLEKKTPGEIGTRSYAKELINNMWNDFSVEDYTQYDSDLQTAKKNRKKPKAWTPRITVPVPFEMTVREQKRREKASDAQETREKMLKRNEDDAECKKKFRANPVPSRLLLPLYEDLVKQNEERRKKTRERSKAALLASQKPFKFIAREEQKQAIREKKLRELCRAKKKPKQFKARPVPRFIYRPPANVKPKREELYGDSRTQPKARDVLQSSPWPSHSTYRAFRDPRSPAMPRGKHRHRRLSPSDQGLEKWKEPFSEQSFRNCPVLCDQCCLYESLCDSNKRQKILADIRMGEEILKETRRPNPSPRHKSPRRSAHASARPCEYSPPMPTASSRGREQAIRRSEKARMKELARIGGAR", - "output": "astral microtubule ; centriole ; centrosome ; ciliary basal body ; mitotic spindle ; mitotic spindle pole ; photoreceptor cell cilium ; photoreceptor connecting cilium ; photoreceptor inner segment ; spindle microtubule ; identical protein binding ; microtubule binding ; cilium assembly ; cilium organization ; positive regulation of protein acetylation" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MITIKCKDTNLDPLPVKIGIIGGSGLDDPDILEQRQERVVETPYGEPSDALIEGEINGVQCVLLARHGRKHDIMPSNVNYRANIWALRDVGCTHLIVSTACGSLREEIKPGNLVVPHDFIDRTTKRLQTFYDGKAQSPRGVCHLPMFPAFSERTRNILLQAAKELEIPAHDKATIVTIEGPRFSSRSESHMFRQWGGDLINMTTCPEVVLAKEAGLLYGSVAIATDYDCWRMGCEGVNVQDVLRTFAENVIKVKKILVNAVGRIAKEDWSEDILNAKQCVCNNTMSGAM", - "output": "cytosol ; nucleus ; identical protein binding ; S-methyl-5-thioadenosine phosphorylase activity ; L-methionine salvage from methylthioadenosine ; purine ribonucleoside salvage" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MTARIIDGAALSQRIREEVAQRVQALTAKGVRPGLAVVLVGDDPASQVYVRNKVAACEKAGLHSVKEQYPADLTEAQLLERIDALNRDPSIHGILVQLPLPRHMDAHKVIEAIAAEKDVDGFHISNAGLLMTGQPLFRPCTPYGVMKMLESEGVALRGAEAVIVGASNIVGKPMAMLLLQAGATITICNSKTRDLGAQTRRADVLVVATGKPGMIDGSMIKPGAVVIDVGINRGADGKLCGDVDMASAREVAGAISPVPGGVGPMTIAMLLVNTVEAAERAAA", - "output": "methenyltetrahydrofolate cyclohydrolase activity ; methylenetetrahydrofolate dehydrogenase (NADP+) activity ; histidine biosynthetic process ; methionine biosynthetic process ; purine nucleotide biosynthetic process ; tetrahydrofolate interconversion" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MGRGAGREYSPAATTAENGGGKKKQKEKELDELKKEVAMDDHKLSLDELGRKYQVDLSKGLTNQRAQDVLARDGPNALTPPPTTPEWVKFCRQLFGGFSILLWIGAILCFLAYGIQAAMEDEPSNDNLYLGVVLAAVVIVTGCFSYYQEAKSSKIMDSFKNMVPQQALVIREGEKMQINAEEVVVGDLVEVKGGDRVPADLRIISSHGCKVDNSSLTGESEPQTRSPEFTHENPLETRNICFFSTNCVEGTARGIVIATGDRTVMGRIATLASGLEVGRTPIAMEIEHFIQLITGVAVFLGVSFFVLSLILGYSWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGATFDKRSPTWTALSRIAGLCNRAVFKAGQENISVSKRDTAGDASESALLKCIELSCGSVRKMRDRNPKVAEIPFNSTNKYQLSIHEREDSPQSHVLVMKGAPERILDRCSTILVQGKEIPLDKEMQDAFQNAYMELGGLGERVLGFCQLNLPSGKFPRGFKFDTDELNFPTEKLCFVGLMSMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPMSQVNPREAKACVVHGSDLKDMTSEQLDEILKNHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGIAMGISGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFIIANIPLPLGTVTILCIDLGTDMVPAISLAYEAAESDIMKRQPRNSQTDKLVNERLISMAYGQIGMIQALGGFFTYFVILAENGFLPSRLLGIRLDWDDRTMNDLEDSYGQEWTYEQRKVVEFTCHTAFFASIVVVQWADLIICKTRRNSVFQQGMKNKILIFGLLEETALAAFLSYCPGMGVALRMYPLKVTWWFCAFPYSLLIFIYDEVRKLILRRYPGGWVEKETYY", - "output": "caveola ; cell projection ; cytoplasm ; dendritic spine ; endosome ; extracellular vesicle ; intercalated disc ; membrane ; neuronal cell body ; organelle membrane ; plasma membrane ; sodium:potassium-exchanging ATPase complex ; T-tubule ; ATP binding ; ATP hydrolysis activity ; ATPase-coupled monoatomic cation transmembrane transporter activity ; P-type sodium:potassium-exchanging transporter activity ; phosphatase activity ; potassium ion binding ; protein heterodimerization activity ; protein-folding chaperone binding ; sodium ion binding ; steroid binding ; steroid hormone binding ; adult locomotory behavior ; amygdala development ; ATP metabolic process ; behavioral fear response ; cardiac muscle contraction ; cell communication by electrical coupling involved in cardiac conduction ; cellular response to mechanical stimulus ; cellular response to steroid hormone stimulus ; intracellular potassium ion homeostasis ; intracellular sodium ion homeostasis ; locomotion ; locomotory exploration behavior ; membrane depolarization during cardiac muscle cell action potential ; membrane repolarization ; monoatomic cation transmembrane transport ; negative regulation of calcium ion transmembrane transport ; negative regulation of calcium:sodium antiporter activity ; negative regulation of cytosolic calcium ion concentration ; negative regulation of heart contraction ; negative regulation of striated muscle contraction ; neurotransmitter uptake ; olfactory cortex development ; positive regulation of heart contraction ; potassium ion import across plasma membrane ; potassium ion transmembrane transport ; potassium ion transport ; proton transmembrane transport ; regulation of blood pressure ; regulation of cardiac muscle cell contraction ; regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion ; regulation of glutamate uptake involved in transmission of nerve impulse ; regulation of muscle contraction ; regulation of respiratory gaseous exchange by nervous system process ; regulation of smooth muscle contraction ; regulation of striated muscle contraction ; regulation of synaptic transmission, glutamatergic ; regulation of the force of heart contraction ; regulation of vasoconstriction ; relaxation of cardiac muscle ; response to auditory stimulus ; response to glycoside ; response to nicotine ; sodium ion export across plasma membrane ; sodium ion transmembrane transport ; sodium ion transport ; transport across blood-brain barrier ; visual learning" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MKYKSIMLLGTASSVGKSTVAAAFCRYFKKKGYRVAPYKALNISLNSFVTKDGDEIGRAQVVQAEACEIDPKEYMNPILMKPSAGFKTQVIVRGKVHCTMDAYKYKELNKYLKEKAKEAYDDISNDYDLIVLEGSGSCAEINLRETDIANMHTAKMADADVILVSDINRGGVFASIVGTIMLLTEEERKRVKGVIINKFRGKREFFEPAMRQIEEIIKIPVLGVMPYFDLDIEEEDSASIKLRKGNGKGIDIAIVRLPHMSNFTDFNSLGRIKDVCIRYAENPKDLENANMIIIPGSKNTIDDLIYLKESGFKEALINESSKGKLIFGICGGYQILGEKIIDSLGVEGDIREEEGLGLLNIVTSFNKEKTTKQVVAFDLEGNEVSGYEIHNGESVPTAKENIWIKEQNGNVLGMKNKEQNVFGTYIHGIFDEGDFGEKLINKLKKELNIEESNDVNYKDYKMSQYDKLCELLEENIDMAYVENLIRY", - "output": "ABC-type vitamin B12 transporter activity ; catalytic activity ; cobalamin biosynthetic process ; glutamine metabolic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MSFITLNNFFNTNTFFGLLPEQYAPFDPLIDVLPIIPVLFFLLAFVWQASVKFR", - "output": "chloroplast thylakoid membrane ; photosystem II reaction center ; photosynthesis" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MKALTARQQEVFDLIRDHISQTGMPPTRAEIAQRLGFRSPNAAEEHLKALARKGVIEIVSGASRGIRLLQEEEEGLPLVGRVAAGEPLLAQQHIEGHYQVDPSLFKPNADFLLRVSGMSMKDIGIMDGDLLAVHKTQDVRNGQVVVARIDDEVTVKRLKKQGNKVELLPENSEFKPIVVDLRQQSFTIEGLAVGVIRNGDWL", - "output": "DNA binding ; serine-type endopeptidase activity ; DNA repair ; DNA replication ; negative regulation of DNA-templated transcription ; proteolysis ; SOS response" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MKLNELYNNIGAKKNKKRIARGVGSGKGKTGGRGIKGQKSRSGVAIKGFEGGQTPMIKRLPKRGFNCISTKEYNIINIYNIEKALIDGRLSAADTITKEKLVEVGLINNKNNKNLVKLLSICSDDFSSPLSLKLDAYSSKAKDLIKKAGGKLL", - "output": "large ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MQNKLASGARLGRQALLFPLCLVLYEFSTYIGNDMIQPGMLAVVEQYQAGIDWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVVWFIVTCLAILLAQNIEQFTLLRFLQGISLCFIGAVGYAAIQESFEEAVCIKITALMANVALIAPLLGPLVGAAWIHVLPWEGMFVLFAALAAISFFGLQRAMPETATRIGEKLSLKELGRDYKLVLKNGRFVAGALALGFVSLPLLAWIAQSPIIIITGEQLSSYEYGLLQVPIFGALIAGNLLLARLTSRRTVRSLIIMGGWPIMIGLLVAAAATVISSHAYLWMTAGLSIYAFGIGLANAGLVRLTLFASDMSKGTVSAAMGMLQMLIFTVGIEISKHAWLNGGNGLFNLFNLVNGILWLSLMVIFLKDKQMGNSHEG", - "output": "plasma membrane ; transmembrane transporter activity ; response to antibiotic" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MLKQVEIFTDGSCLGNPGPGGYGAILRYRGREKTFSAGYTRTTNNRMELMAAIVALEALKEHCEVILSTDSQYVRQGITQWIHNWKKRGWKTADKKPVKNVDLWQRLDAALGQHQIKWEWVKGHAGHPENERCDELARAAAMNPTLEDTGYQVEV", - "output": "cytoplasm ; endonuclease activity ; magnesium ion binding ; nucleic acid binding ; RNA-DNA hybrid ribonuclease activity ; DNA replication, removal of RNA primer ; RNA phosphodiester bond hydrolysis, endonucleolytic" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MSFLPLRSRSRSGAPHWVYIILYHIFTIPKIYSLPLLSGSHVLNSRDVADSGHSVGDEASVTTYYIISIILVLLGGVFAGLTLGLMGQDEVYLKVISTSGSNSEKKLAKRVLDLISRGKHWVLVTLLLSNVITNETLPIVLDRCLGGGWQAVVSSTILIVIFGEIIPQSVCVKYGLQVGAFFCPFVLVLMYLMYPVAYPIATLLDYMLGEDHGTMYKKSGLKTLVTLHRTMGVERLTKDEVTIISAVLDLKAKRVEEIMTPIENVFTMSADTILDDKTVEKIFNSGFSRIPIFLPNEPNNFIGMLLVRVLISYDPDDCLPISHFPLATLPETSPNTSCLNILNYFQEGKAHMCVVSKEPGSSHGAIGVLTLEDVIEELIGEEIVDESDVFVDMHQHIMRQQPGPLSKRHITSYLHHLYTSSHKEHKAADQADESSPLLSPSNSNHPSEHPQQDLNNKSWKQKSNDGYDRSNAVLSPTPQVTEHGTIIPSNLASNPLNVNKSFVTIKKPANVPKIITTHTPHSSKEPSPAPHSNDKSLSAEEQQLLSDHAELSRQAVLHTQRSGQPTQVTTSTKTTRNSPDSISIPNSGANHGNENQNVTISTSYQNTKNGIVESVITVKGVPKTIIGPAKDWDESKSEYGNENINQENSNRSDDRESSSSNASLFSSIKNKFKNENANNNDRSNFTDSLSRTSNYDANGSSSTIKR", - "output": "cytoplasm ; endoplasmic reticulum ; fungal-type vacuole membrane ; intracellular manganese ion homeostasis ; magnesium ion homeostasis ; mitochondrion organization" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MKALFSVLCLVLLVSILRAAVTKPDSGIFTGCLRNRTSLENPITDAIFTSRNTTTFLSSYVSYTKNKRYSSLNYQKLVAIVAAKHVSHVQATVVCAKANGIQLRIRSGGHDYEGLSYTSSVPFVILDMYNLRSITVDVSSKKAWVQAGATLGELYTKINEASQTLAFPAGVCPTVGVGGHITGGGFGNLMRKFGITVDHVIDAQLIGVNGKLLDRATMGEDLFWAIRGGGGASFGVILSWKINLVEVPKILTVFKVSKTLEQGGTDVLYKWQLVATKVPEDLFIRAWPQIVKGTKLGERTIGVVFFAQFLGPTDKLMEIMSQSLPELGLRREDCHEMSWFNTTLFWANYPVGTPTRVLLDRPSTPGEFFKSKSDNIKKPIPKEGLEKIWKTMLKFNFVWIEFNPYGGVMDRIPATATAFPHRKGNLFNLQYSTIWLDAKETENKLTMMKELYEVAGPYVSSNPREALFNFRDFDIGINPSGLNVDEAKIYGYKYFLGNLKRLMDVKAKCDPDNFFKNEQSILPARVM", - "output": "extracellular region ; plant-type cell wall ; FAD binding ; oxidoreductase activity" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MAAPQPQAAAVSSASGVSGPGSAGGPGPQQQPQPTQLVGSAQSGLLQQQQQDFDPVQRYKMLIPQLKESLQTLMKVAAQNLIQNTNIDNGQKSSDAPLQRFDKCLEEFYALCDQLELCLRLAHECLSQSCDSAKHSPTLVPTATKPDAVQPDSLPYPQYLAVIKAQITCAKDIHTALLDCANKVTGKTTAPSTGPGGSL", - "output": "core mediator complex ; mediator complex ; nucleoplasm ; nucleus ; transcription coregulator activity ; positive regulation of transcription elongation by RNA polymerase II ; positive regulation of transcription initiation by RNA polymerase II ; regulation of transcription by RNA polymerase II ; RNA polymerase II preinitiation complex assembly" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MARYLGPKLKLSRREGTDLFLKSGVRAIESKCKIDNAPGVHGARKPRLSDYGLQLREKQKVRRMYGVLEKQFRNYYKESARLQGNTGENLLQLLEGRLDNVVYRMGFGATRAESRQLVSHKAVLVNGKVVNIPSFNVKASDVIAIREKAKKQSRIGAALEIAGQREVPTWVSVDATKMEGVFTRQPERSDLSAEINEQLIIELYSK", - "output": "small ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MAKPTRKRRVKKNIESGIAHIHATFNNTIVMITDVHGNALAWSSAGALGFKGSRKSTPFAAQMAAEAAAKSAQEHGLKTVEVTVKGPGSGRESAIRALAAAGLEVTSIRDVTPVPHNGARPPKRRRV", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "NLYQFKNMIHCTVPNRSWWHFANYGCYCGRGGSGTPVDDLDRCCQIHDNCYGEAEKISGCWPYIKTYTYDSCQGTLTSCGAANNCAASVCDCDRVAANCFARAPYIDKNYNIDFNARCQ", - "output": "extracellular region ; calcium ion binding ; phospholipase A2 activity ; arachidonic acid secretion ; lipid catabolic process ; phospholipid metabolic process" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MTTQVPPSALLPLNPEQLARLQAATTDLTPTQLAWVSGYFWGVLNQQPAALAATPAPAAEMPGITIISASQTGNARRVAEALRDDLLAAKLNVKLVNAGDYKFKQIASEKLLIVVTSTQGEGEPPEEAVALHKFLFSKKAPKLENTAFAVFSLGDSSYEFFCQSGKDFDSKLAELGGERLLDRVDADVEYQAAASEWRARVVDALKSRAPVAAPSQSVATGTVNEIHTSPYSKDAPLAASLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLKGDEPVTVEGKTLPLNEALQWHFELTVNTANIVENYATLTRSETLLPLVGDKAKLQHYAATTPIVDMVRFSPAQLDAEALINLLRPLTPRLYSIASSQAEVENEVHVTVGVVRYDVEGRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPTNPETPVIMIGPGTGIAPFRAFMQQRAADEAPGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLTRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDANRMAKDVEQALLEVIAEFGGMDTEAADEFLSELRVERRYQRDVY", - "output": "flavin adenine dinucleotide binding ; FMN binding ; sulfite reductase (NADPH) activity ; cysteine biosynthetic process ; hydrogen sulfide biosynthetic process ; sulfate assimilation" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MEPHLLMLGFLSFTIVPGCWAELCLYDPPEVPNATFKALSYKNGTILNCECKRGFRRLNELVYMACLGNSWSNNCQCTSNSHDNSREQVTPQPEGQKEQQTTDTQKSTQSVYQENLAGHCREPPPWRHEDTKRIYHFVEGQIVLYTCIQGYKALQRGPAISICKTVCGEIRWTHPQLTCVDEKEHHQFLASEESQGSRNSFPESEASCPTPNTDFSQLTEATTTMETFVFTKEYQVAVASCIFLLLSILLLSGFTWQHRWRKSRRTI", - "output": "cell surface ; external side of plasma membrane ; interleukin-2 binding ; interleukin-2 receptor activity ; activated T cell proliferation ; activation-induced cell death of T cells ; inflammatory response ; inflammatory response to antigenic stimulus ; lymphocyte proliferation ; negative regulation of inflammatory response ; negative regulation of lymphocyte proliferation ; negative regulation of T cell proliferation ; Notch signaling pathway ; positive regulation of activated T cell proliferation ; positive regulation of T cell differentiation ; positive regulation of T cell proliferation ; regulation of CD4-positive, alpha-beta T cell proliferation ; regulation of T cell homeostatic proliferation ; regulation of T cell tolerance induction ; T cell homeostasis" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MVDVNRFKSMQITLASPSKVRSWSYGEVKKPETINYRTLKPEREGLFDEVIFGPTKDWECACGKYKRIRYRGIVCDRCGVEVTRTKVRRERMGHIELKAPVSHIWYFKGIPSRMGLTLDMSPRALEEVIYFAAYVVIDPKDTPLEHKSIMTEREYRERLREYGYGSFVAKMGAEAIQDLLKQVDLEKEIAELKEELKTATGQKRVKAIRRLDVLDAFYKSGNKPEWMILNILPVIPPDLRPMLQLDGGRFASSDLNDLYRRVINRNNRLARLLELNAPGIIVQNEKRMLQEAVDALIDNGRRGRPITGPGSRPLKSLSHMLKGKQGRFRQNLLGKRVDFSGRSVIAVGPTLKMYQCGVPREMAIELFKPFVMREIVARDIVQNVKAAKRLVERGDERIWDILEEVIKEHPVLLNRAPTLHRLGIQAFEPVLIDGKALRLHPLVCEAYNADFDGDQMAIHVPLSEEAQAEARILMLAAEHILNPKDGKPVVTPSQDMVLGNYYLTMEEAGREGEGMVFKDRDEAVMAYRNGYVHLHSRVGIATDSLNKPWTEEQRHKVLLTTVGKILFNDIMPEGLPYLQEPNNANLTEGVPAKYFLPLGGAIKEAISNLELNPPFKKKNLGNIIAEIFKRFRTTETSALLDRMKNLGYHHSTLAGLTVGIADIPVVDDKAEIIEESHKRVEQITKQFRRGMITDDERYNAVTAEWRAAREKLEKRLIANQDPKNPIVMMMDSGARGNISNFSQLAGMRGLMAAPNGRIMELPILSNFREGLSVLEMFFSTHGARKGMTDTALKTADSGYLTRRLVDVAQDVIIREDDCGTDRGLLIRSIAEGKEMIESLEERLNGRYTKKTVKHPETGAVIIGPNELITEDKAREIVNAGVEEVTIRSVFTCNTRHGVCRHCYGINLATGDAVEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVASNTDITQGLPRVQEIFEARNPKGEAVITEVKGQVTAIEEDASTRTKKVFVKGETGEGEYVVPFTARMRVEVGGQVARGAALTEGSIQPKRLLAVRDVLSVETYLLGEVQKVYRSQGVEIGDKHIEVMVRQMIRKVRVMDPGDTDLLMGTLMDINDFTDANKDVLIAGGVPATGRPVLMGITKASLETNSFLSAASFQETTRVLTDAAIRGKKDHLLGLKENVIIGKIIPAGTGMARYRNLEPHAVNEEEYLNPPVEEEGNEETTEVVVDTAVETVEETVE", - "output": "DNA-directed RNA polymerase complex ; DNA binding ; DNA-directed 5'-3' RNA polymerase activity ; magnesium ion binding ; zinc ion binding ; DNA-templated transcription" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MPLMKFKPTSPGRRSAVRVVTPDLHKGAPHAALLDSQSKSGGRNHHGRITVRHVGGGHKQHYRIIDFKRNKEGIPARVERIEYDPNRTAHIALLCYVDGERCYIIAPKGLKAGDQVIAGANAPIKTGNTLPLRNIPVGTTVHGIELKPGKGAQIARAAGAAVQLVAREGIYATLRLRSGEMRKVPVECRATIGEVGNDEHNLEKLGKAGAKRWRGVRPTVRGAAMNPVDHPHGGGEAKAGQGNPHPVTPWGVPTKGYKTRKNKRTQQFIVRDRRG", - "output": "large ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; transferase activity ; translation" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MTSVTDHSAHSMERAAEHTINIHTTAGKLAELHKRTEEALHPVGAAAFEKVHAKGKFTARERIYALLDDDSFVELDALARHRSTNFGLGENRPVGDGVVTGYGTIDGRDVCIFSQDVTVFGGSLGEVYGEKIVKVQELAIKTGRPLIGINDGAGARIQEGVVSLGLYSRIFRNNILASGVIPQISLIMGAAAGGHVYSPALTDFVVMVDQTSQMFITGPDVIKTVTGEDVTMEELGGAHTHMAKSGTAHYVASGEQDAFDWVRDVLSYLPSNNFTDAPRYSKPVPHGSIEDNLTAKDLELDTLIPDSPNQPYDMHEVVTRLLDEEEFLEVQAGYATNIVVGLGRIDDRPVGIVANQPIQFAGCLDINASEKAARFVRVCDCFNIPIVMLVDVPGFLPGTEQEYDGIIRRGAKLLFAYGEATVPKITVITRKAYGGAYCVMGSKNMGCDVNLAWPTAQIAVMGASGAVGFVYRKELAQAAKNGANVDELRLQLQQEYEDTLVNPYIAAERGYVDAVIPPSHTRGYIATALHLLERKIAHLPPKKHGNIPL", - "output": "ligase activity ; transferase activity ; organic substance metabolic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MSKEKFERTKPHVNVGTIGHIDHGKTTLTAAITRVLSTKGQASFTDFSDIDKAPEEKERGITIATAHVEYETVNRHYAHVDCPGHADYIKNMITGAAQMDGAILVVAATDGAMPQTREHILLARQVGVPAMVVFLNKCDMVDDDELIELVEMELRELLDDYEFPGDDVPFIHGSALLALENPEDEDKAACIWELMDQIDSYIPEPERDVDQPFLMPVEDVFSISGRGTVATGRVERGIIKVGEEVAIVGVRDTVKTTCTGVEMFRKLLDEGRAGDNIGALLRGVKREDIERGQVLAKPGTITPHTKFKAECYILGKDEGGRHTPFFNGYRPQFYFRTTDVTGIVTLPEGIEMVMPGDNVAVEAELITPIAMDAGLRFAIREGGRTVGAGVISEIIA", - "output": "cytoplasm ; GTP binding ; GTPase activity ; guanosine tetraphosphate binding ; translation elongation factor activity" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MLNLVLMMIERVGLIVILGFLLSHIKTFRRLLHKQDGYVDKLKLICIFSVFTIVSNYTGIEIAGNTIMNENWLQGVSSSSTIANTRIMGVGISGLLGGPIVGIGVGSIAGIHRYMLGGTTALSCAISSILAGVITGYIGYIFKKYNRTITPKFSAVLSVFIVSLEMIMILLIVEDGISIVKTIAIPMILVNSFGSFILLSMIQAILRQEENAKALQTHKVLRIADKTLPYFRQGLTEESCKHVAQIIHRFTGTDAVSLTDTEKILAHVGLASDHHIPSHSLITGLSKEVLHTGKIMKAKSREVINCQHEGCPLQAAIVIPLTSHGNTIGTLKLYFKNPNQLSRVEEELAEGLAKIFSTQLELGEAELQSKLLQDAEIKALQAQINPHFLFNAINTVSALCRTDVEKARKLLLQLSVYFRCNLQGARQLLIPLEQELNHVQAYLSLEQARFPNKYEVKMYIEDELKTTLVPPFVLQLLVENALRHAFPKKQPVCEVEVHVFEKEGMVHFEVKDNGQGIEEERLEQLGKMVVSSKKGTGTALYNINERLIGLFGKETMLHIESEVNEGTEITFVIPKKVGEEEQIVKSISS", - "output": "plasma membrane ; ATP binding ; phosphorelay sensor kinase activity ; cell wall organization" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MRSGVIAQKVGMTRVFTEAGEHIPVTVLKLGNCQVVAHRTTEKNGYVALQLGSGARKTVYMPKAERGQFAVAKVEPKRKVAEFRVSEDALIPVGAEIQADHFVVGQFVDVTGTSTGKGFAGGMKRWNFGGLRATHGVSVSHRSIGSTGGRQDPGKTFKNKKMPGHMGVDRITTLNLRVVQTDVERGLILVEGAVPGSKGGWISVRDAVKKALPADAPKPGKFRLANGGDEVAAPAAEQEGA", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MSEILKNDVDPIETQDWLQSLDSLIREEGVERAQYIVEQVIGQARTSGVSLPTGVTTDYVNTIPVAEQPAYPGDHAIERRIRSAVRWNAIAMVLRSQKKDLDLGGHISTFQSAATMYEVCYNHFFKAATEKNGGDLIFFQGHAAPGMYARAFLEGRLTEEQMDNFRQEAFTDGLSSYPHPKLMPEFWQFSTVSMGLGPVNAIYQARFLKYLDNRGLKDTKDQKVYAFLGDGEMDEIESKGALTFAAREHLDNLIFTISCNLQRLDGPVNGNGKIVQELEGLFTGAGWEVIKVLWGSDWDKLFAKDTSGKLTQLMMEVVDGDYLTFKSKDGAYIREHFFGRYPETAALVADMTDDEIWALRRGAHDSEKLYAAYAKAQNATKPVVILAHQVKGYKIPEAESKNTAHQSKKMSYESLKGFRDFFELPLTDEQVEKLEYIKFAEGTPEYEYLHGHRKALNGYVPARRTKFDVEYKVPALEEFKALLEEQPRGISTTMAFTRALNILLKDKNIGKTIVPMIADEARTFGMEGLFRQVGIYNPHGQNYIPSDRDLVAYYREAKDGQVLQEGINELGATASWLAAANSYSVNNQPMIPFFIYYSMFGFQRVGDMMWAAGDQLARGFMVGGTSGRTTLNGEGLQHEDGHSHIQAGIIPNCITYDPSFAFEVAVIMQDGINRMYGEKQEDVFYYMTTLNEVMDQPAMPAGAEEGIRKGLYKFETVEGKKGKGHVQLLGSGAIMRHVREAAQILANDYGVTSDVFSAPSFNELAREGHDAARWNLLHPTETQRVPYVAQVLADLPTVASTDYVKGYADQIRAFVPSKHYHVLGTDGFGRSDSRANLREHFEVDARYVVVAALSQLAKEGTVSNQVVADAIAKFGLNVDRINPLYA", - "output": "pyruvate dehydrogenase (acetyl-transferring) activity ; glycolytic process" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MDPVVRKPDPGGVQHRVTKALRAIVGHACRHPIHTLLVTALTAATTHLHVLEGTYQATHRGLAPWAKETPLNVQSFLWGSRTVSLGEASAWKWQIDDRPKVPEDGQSDFHWALVTLDLPGASVDASIPFLSNTLSGFLGAEQTTPTPDSSPSPDHSALTFRVPYSQLDGFLQAVEIIPSEKEDDSWRLRSPREEGSPRSLGHWLGSSWLSFLHRVHHAETVDLVIIGLSYLAMNMTVVSLFRVMRHLGSRFWLAASVLLSGAFAFVLGLGITTTCDVPVDMLLLFEGIPYLVLTVGFEKPIQLTRAVLCVSEELWGGGQRQVPNGASSDDSRQNQLIPNIIQLAVDREGWYIVRSYLLEIGALALGAVLRPKDSLGHFCFLAAWTLLIDAVLLFTFYATILCVKLEITRIRSPGGLGQVNAKHPSGIFGHKVKSTNITWWKLLTVGGFVLCHFLQLSPFFYRVMGEYMANGTLPPTAVSPFKEAANGLNEIYLTARVEGFETRVTVLPPLQYVLESAGFNISATKRSTFDGVLDGLESPLGRLCLMGALVVSLVLNNHLIHAARWHAWPQARESAVPDGSYLSVPCSATAPEVCTRPPEETEALLKSNQAESLTDDELVELCLRGKIAGYSLEKTLERIAAGSSRSVTRLEAFTRAVRIRRAAVSKTPSTQNLCSGLAESLLPYRDYNYELVHGACCENVVGYLPLPLGVAGPMVIDGQALFIPMATTEGVLVASASRGCKAINAGGGATTMLKGDGMTRGPCLRFPSAQRAAEAQRWVESPLGHEVLAAAFNATSRFARLQTLTVAQAGIYLYIRFRTTTGDAMGMNMISKGVEKALEAMAAEGGFPDMHTVTLSGNFCSDKKSAAINWIGGRGKSVIAEATIPAETVRQVLKTDVDALVELNTAKNLVGSAMAGSLGGFNAHASNLVQAVFLATGQDPAQNVESSSCITTMKNIDGNLHIAVSMPSMEVGTIGGGTILEAQGAMLDLLGVRGAHSTEPGANARRLARIVAAAVLAGELSTCAALAAGHLVNAHMQHNRSAGATVKK", - "output": "endoplasmic reticulum membrane ; hydroxymethylglutaryl-CoA reductase (NADPH) activity ; coenzyme A metabolic process ; isoprenoid biosynthetic process ; sterol biosynthetic process" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MIKSLNERDNFLNRLREMEHKREKDEKQEKAARKVQKFWRGHRVQHNQRLLFRAEFDAVSDRQRGLEETIKMAQLLVNFYETNKDEERLVMTLSELVKLKTSDKEFEKRIRETQRLLLARCCIKFLKNATENTIFFHIFRYLEDYVTCHSKLFEASSKLGLFNAEFHLLEALIGKPTGKTVERASLNPRILQLLTRIFETFVNPSRSTSVSVNVANRLLKTICVNITDLNFSNYILYYIKDHIKPTSPNFTNLFEAMKSVDILNNWKVRPEIAETASLRLQSIFVSQIVHVSNTQSEDVKQYFNSLAVFLEHHSKIMRSLNVKEDLSEFGRLRTSVNNHLKQYCEEMLISNEFRRAACIYANLPGVQVETIISLRKYFSQFLDLLAASNTFVEALYAFIARLCPNGEFDPIDAKSPKVNALELFCNCLNKRVSSVADSDFVPTDIFVDFDHTVEFLRDVSIKLIHLMFPTMARGDLYSGNLKEKMYKAETDWKDVTESVFSILGAIYQKDIRLKYFPEEFWTNHGREVLSGIGEHRRMPRRRMPNGRLQIERTMDTEFVERLAAIYEMDSDSENDDEDEDNNLPAVLRRAICVMKHIPFIVPFMDRVKLFTRLLNQDKEKHYTSTFGMGFNGPSVTVRRDQVYMDAFETFAPKMQGDKVNDLKSMVRVKMVNWAGMNESGIDGGGIFREFLSELLKTAFNVERGFFTFTESKLLYPNPTAPFLLGVDCLAHFQFIGRMIGKLIYERQLQEVRFAEFFIAQIFETDKNKDVDLQHMKSFDPIIFKHLKALQKMNNRELDELQLDFSVVTSDMGLVRNVNLKPNGSKFRVTVENVHEYVRLYVNYHLKQRIASMVDAVRKGISEIISIEWMRMFAPHELQIMIAGYEEVFTAKELRKFCELRFAAGTQDINYEEMFWDVIDKLSNDDKKALLKFVTGCSRAPVDGFKSIQPRMGVLVIPSSDDELPTSATCMNMLRIPKYSNRTKLEEKLRYAINSGAGFELA", - "output": "ubiquitin protein ligase activity ; meiotic cell cycle ; positive regulation of metaphase/anaphase transition of meiotic cell cycle ; protein polyubiquitination ; regulation of metaphase/anaphase transition of meiosis II ; ubiquitin-dependent protein catabolic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MPRKGHIAKRDVLPDPVYNSKVVTKFINSIMEDGKKGVAQKICYEAFGLIAKRSGKEALEVFEEAMNNVMPLLEVKARRIGGATYQVPIEVRPERRQTLGIRWMLIAARKRGEKLMSERVAGELLDASNNTGAAVKKREDTHKMAEANKAFAHYRY", - "output": "small ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; tRNA binding ; translation" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MTNRWSFDVKKNLVTLILTWLCLSISTAQAARIKDVSEVAGVRSNQLIGYGLVSGLPGTGESTPFTDQSFNAMLQNFGIQLPPGTKPKTKNVAAVMVTTTLPAFAKQGQVVDITVSSVGSAKSLRGGTLLQTFLKGLDGKTYAIAQGNLIVSGFSATGADGSKIVGNNPTVGRISGGAMVEREVPSPFGRGDFITFNLLDSDFTTAQRMADAVNNFLGPNMASAVDATSVRVRAPRDISQRVAFLSAVENVNFDPADGSAKIIVNSRTGTIVVGKHVRLRAAAVTHGGMTVAIKENQQVSQPGPFGNGKTVVTQDSDIEVTEKQGKMFKFEPGLTLDDLVRAVNEVGAAPSDLMAILQALKQAGAIEGQLIII", - "output": "bacterial-type flagellum basal body, distal rod, P ring ; outer membrane-bounded periplasmic space ; structural molecule activity ; bacterial-type flagellum-dependent cell motility" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MDVTRLLLATLLVFLCFFTAYSHPPPEEKLRDDRSLRSNSSVNLLDFPSVSIVALNKNSKQISRKEAEKKRSSKKEASMKKVARPRTPLSAPCVATRDSCKSPAPACCDPCASCQCRFFRSACSCRVLSLNC", - "output": "extracellular region ; signaling receptor binding ; hormone-mediated signaling pathway" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MNQSYGRLVSRAAIAATAMASLLLLIKIFAWWYTGSVSILAALVDSLVDIGASLTNLLVVRYSLQPADDNHSFGHGKAESLAALAQSMFISGSALFLFLTGIQHLISPTPMTDPGVGVIVTIVALICTIILVSFQRWVVRRTQSQAVRADMLHYQSDVMMNGAILLALGLSWYGWHRADALFALGIGIYILYSALRMGYEAVQSLLDRALPDEERQEIIDIVTSWPGVSGAHDLRTRQSGPTRFIQIHLEMEDSLPLVQAHMVADQVEQAILRRFPGSDVIIHQDPCSVVPREGKRSMLS", - "output": "plasma membrane ; antiporter activity ; cadmium ion transmembrane transporter activity ; iron ion transmembrane transporter activity ; metal ion binding ; zinc ion transmembrane transporter activity" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MAFLLHQARFFTTVNHLRDLPPTVQPEVAFAGRSNAGKSTAINVLCNQKRLAFASKTPGRTQHINYFSVGPAAEPVAHLVDLPGYGYAEVPGAAKAHWEQLLSSYLQTRPQLCGMILMMDARRPLTELDRRMIEWFAPTGKPIHSLLTKCDKLTRQESINALRATQKSLDAYRDAGYAGKLTVQLFSALKRTGLDDAHALIESWVRPAAADEDRAAVAE", - "output": "GTP binding ; metal ion binding ; division septum assembly" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MSDDVALPLQFTDAAANKVKSLIADEDNPNLKLRVYITGGGCSGFQYGFTFDDQINDGDMTIEKQGVSLVVDPMSLQYLVGGAVDYTEGLEGSRFVVNNPNATSTCGCGSSFSI", - "output": "2 iron, 2 sulfur cluster binding ; iron ion binding ; iron-sulfur cluster assembly" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MKKVLALVVAAAMGLSSAAFAAETATPAKTAAPAKTTQTTQHHKKQHKKTVEQKAQAAKKHQKKDGKKAPAKSTSKTTSQPAA", - "output": "periplasmic space ; response to acidic pH" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MDSASLAVVVWAILLVLWLRRIFGQRSSLPLPPAPPGYPVIGNLLDLANNDVHIRARHWSRNFDDDVISLKVLGKTMIILNSPTAVSDLFDKRASNYSDRPDMPMIVDFIGWDWTFALMRYGPRWKEHRRVFNNHFNIGTSGASEDRHIQLRICRELLSLMFQSPSKYLENLRHYTGHIILKRTYGHTVVDEEDPYIRLVEAASQSTSEAAVPGAFLVDLFPSMKYIPEWFPGAQFKRKAREWRKLSEAMINAPYDMAKGKFDEGNAEACFVSACLEQNKTASGQGLSEELIKDTAAVAYAAGADTSVSTLTTFILAMTLYPDVQKAAQAELDALLGGERLPDFGDKTRLPYVTAILKEVLRWIPVLPMAVPHRAVNADTYKGYYIPAGAFVYGNAWAILHNPDIFADPETFRPDRFIENPTLLNPIDNGVFGFGRRACAGRVMALDTMWIAMASILAVFDISKAVDERGNEITPPVKLSPGTISHPAPFPCIIKPRSKAALELITQDD", - "output": "membrane ; heme binding ; iron ion binding ; monooxygenase activity ; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MNTNKIGVLLANLGTPDEPTTPAVKRYLKQFLSDPRVIDLPKFKWQFILNYMILPKRSPKVAKLYREIWTEQGSPLLAISRQQQQALQDYFNRQNQNVLVELGMSYGNPSIESATDRLIKAGVSKIIVLPLYPQYSSTTTASVLDAFARGLTQQRNIVPFEFIHSYHNDPLYIQALANTIRLADDEKLLFSFHGIPKRYQTEGDFYPEHCQKTAQLVADKLSLSNEQWLVTYQSRFGDEEWLQPYTDETLEKLPSQGVKKIAVICAGFSADCLETLEEIAEENKENFLNAGGQSYRYIPALNANTDHINALAKLIEAKI", - "output": "cytoplasm ; ferrochelatase activity ; metal ion binding ; heme biosynthetic process" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MRRTVKDFRNAKGQRLVYLTAYDYPTARLAEAAGVDAILVGDSLGMVVLGYPSTVPVTLEEMLHHTKAARRGAPETFLVADLPYLAYATLDRALLAAERLLKEGGADAVKLEGGEEVAEIVRGLVRAGVPVLGHVGLTPQTASQLGGYKLQGRRPEEAERILKGALALEEAGAYGVVLEMVPARLAKEVTERLSVHTVGIGAGPHTDAQVLVFHDVVGLYGDFKPRFVKRYLEAGRLIQEALSRYAQEVREGVFPGEEHSF", - "output": "cytoplasm ; 3-methyl-2-oxobutanoate hydroxymethyltransferase activity ; metal ion binding ; pantothenate biosynthetic process" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MMKSIRYYLAFAAFIALYYVIPVNSRLLWQPDETRYAEISREMLASGDWIVPHFLGLRYFEKPIAGYWINSLGQWLFGATNFGVRAGAILTTLLAAALVAWLTFRLWRDKRTALLASVIFLSLFAVYSIGTYAVLDPMIALWLTAGMCCFWQGMQATTRTGKIGMFLLLGATCGLGVLTKGFLALAVPVVSVLPWVIVQKRWKDFLLYGWLAVLSCFMVVLPWAIAIARREADFWHYFFWVEHIQRFAMSDAQHKAPFWYYLPVLLAGSLPWLGLLPGALKLGWRERNGAFYLLGWTIMPLLFFSIAKGKLPTYVLSCFAPIAILMARFVLHNVKEGVAALRVNGGINLVFGLVGIVAAFVVSSWGPLKSPVWTHIETYKVFCVWGVFTVWAFVGWYSLCHSQKYLLPAFCPLGLALLFGFSIPDRVMESKQPQFFVEMTQAPLASSRYILADNVGVAAGLAWSLKRDDIMLYGHAGELRYGLSYPDVQDKFVKADDFNAWLNQHRQEGIITLVLSIAKDEDISALSLPPADNIDYQGRLVLIQYRPK", - "output": "plasma membrane ; 4-amino-4-deoxy-L-arabinose transferase activity ; mannosyltransferase activity ; lipid A biosynthetic process ; lipopolysaccharide biosynthetic process ; protein O-linked glycosylation" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MSLQNLTRFPRLELIGAPTPLEYLPRLSDHLGREIFIKRDDTTPLAMGGNKLRKLEFLAADALREGADTLITAGAIQSNHVRQTAAVAAKLGLHCVALLENPIGTGAENYLSNGNRLLLDLFNTQVEMCDALTNPAEQLDELATRIEAQGYRPYVIPVGGSNALGALGYVESALEIAQQCEGAVEISSVVVASGSAGTHAGLAVGLEQLMPQAELIGVTVSRSVADQLPKVVALQQAVANSLELQAKADITLWDDYFAPGYGTPNEEGMAAVKLLAQLEGILLDPVYTGKAMAGLIDGITQKRFKDEGPILFVHTGGAPALFAYHPHL", - "output": "D-cysteine desulfhydrase activity ; D-amino acid metabolic process" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MNSLVATPPVPPHFYEYSRLSSSRPMSTPTYTPNSRKRKADDDGNDHDGRMSASPTSSPAFTPRSLPSRNMKRARPNVSGRPLSLPRLLETLDTDALRGVLRSMCERHPGLVDEVVHTAPRPSVSSALQVLRNYQSTLQSSFPLGGNPASDYAYNRVRQPLSNLLDALSDFTPHFLPPNEIQPSLSLNYLDGATEIIHALPRWHTPQNNIERDSAYDEICKAWILVIREAAKRGGGIQLQYGGWDQKLAKHNQNSGGKLQAAVNELGASLGWMHGPETQSHASPGGNDFGSIREQLLSGTYGLGTPVKVGPW", - "output": "cytoplasm ; nucleus ; nuclear protein quality control by the ubiquitin-proteasome system ; proteasome localization ; protein transport" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MSRFFIDRPIFAWVLAIIAMLAGALSLTKMPISQYPNIAAPAVSIQVVYPGASAKTVQDTVVQVIEQQLNGLDGFRYMAAESASDGSMNIIVTFEQGTNPDIAQVQVQNKLQLATPRLPEEVQRQGLRVVKYQMNFFMVVGLVDKTGKMTNFDLGNLIASQLQDPISRINGVGDFLLFGSPYAMRIWLDPGKLNSYQLTPGDVAQAIREQNVQVSSGQLGGLPTRSGVQLNATVVGKTRMTTPAEFEEILVKVKADGSQVRVKDLGRVVLASENFAISAKYRGQDSAGLGLRLASGGNLLETVKAVKAELEKQKAYLPEGVEVIYPYDTSPVVEASIDSVVHTILEAVVLVFLVMFLFLQSLRATIIPTLAVPVVLLAAFALLPYFGISINVLTMYAMVLAIGLLVDDAIVVVENVERLMHDEGLSPLEATRKSMGQISGALVGIGMVLSAVFVPMAFFGGSAGIIYKQFAVTIVICMSLSVLVALIFTPALCATILKAPENDAHHEKKGFFGWFNRSFDRNSARFERGVGGILKHRGRYLLIFALITAGTGYLFTQIPKAFLPSEDQGLMMTEVRMPLNASAERTEVVLQEVKDYLLKEEGQLVDHVMTVNGFNFAGRGQNSGLVLVVLKDWAARQAAGEDVLSVAERANARFARIKDATVMAFVPPAVLEMGNAMGFDLYLQDNLGLGHESLMAARNQFLELAAENPSLRAVRPNGKDDEPQFQVKIDDEKARALQVSIASINDTMSAAWGSMYVNDFIDLGRVKRVYIQGVDSSRIAPEDFDKWYVRNALGEMVPFSAFATGEWIHGSPKLERYGGISAVNILGEPAPGFSTGDAMIAIAQIMQQLPSGIGLSYNGLSYEEIRTGDQAPMLYALTVLIVFLCLAALYESWSVPMSVILVVPLGIFGAVLATLWRGLEADVYFQVGLMTTVGLSAKNAILIIEFAKELYEKEGVPLVKAAIEAARLRLRPIIMTSLAFTFGVLPMARATGAGAGSQHSIATGVVGGMITATVLAVFFVPLFYVVVVKVFERNKKPAALAEEELA", - "output": "plasma membrane ; efflux transmembrane transporter activity ; xenobiotic transport" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MPINVPDGLPAAEILTKEDVFIMEEKRAEHQDIRPLSIVILNLMPNKIITETQILRLLGNSPLQVDITLLYPETHRSKNTPEEYLIKYYQTFDSIKDQKFDGMIITGAPIEQMPFEEVDFWPELQKIMDWSKANVFSTLFICWGAQAGLYHFFGVPKYPLPAKMFGVFPHTLNRRDIRLLRGFDDIFYVPHSRHTEVRKEDIVKVPELEILSESEESGVYLVGTKGGRQIFVTGHSEYDPYTLKAEYDRDISYELPINVPQNYYPGDDPRQTPVVRWRGHSNLLFANWLNYYVYQETPYNLEELGNR", - "output": "cytoplasm ; homoserine O-acetyltransferase activity ; homoserine O-succinyltransferase activity ; L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MKKIVLYGGQFNPIHTAHMIVASEVFHELQPDEFYFLPSFMSPLKKHHDFIDVQHRLTMIQMIIDELGFGDICDDEIKRGGQSYTYDTIKAFKEQHKDSELYFVIGTDQYNQLEKWYQIEYLKEMVTFVVVNRDKNSQNVENAMIAIQIPRVDISSTMIRQRVSEGKSIQVLVPKSVENYIKGEGLYEH", - "output": "ATP binding ; nicotinamide-nucleotide adenylyltransferase activity ; nicotinate-nucleotide adenylyltransferase activity ; NAD biosynthetic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MEESINPIISIGPVIFNLTMLAMTLLIVGVIFVFIYWASRNMTLKPKGKQNVLEYVYDFVIGFTEPNIGSRYMKDYSLFFLCLFLFMVIANNLGLMTKLQTIDGTNWWSSPTANLQYDLTLSFLVILLTHIESVRRRGFKKSIKSFMSPVFVIPMNILEEFTNFLSLALRIFGNIFAGEVMTSLLLLLSHQAIYWYPVAFGANLAWTAFSVFISCIQAYVFTLLTSVYLGNKINIEEE", - "output": "plasma membrane ; proton-transporting ATP synthase complex, coupling factor F(o) ; proton-transporting ATP synthase activity, rotational mechanism" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MYAVIVTGGKQYKVTEGEFLKIEKLELATGEAVTFDRVLLIGNGDDVKIGAPVVDGAKVVAEVVSQGRHDKVRIIKFRRRKHHMKRQGHRQWFTEIKITGIQA", - "output": "cytoplasm ; ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MPVNDNNLIWIDLEMTGLDPERDRIIEIATLVTDANLAILAEGPVLAIYQSDAQLALMNDWNVRTHTASGLVDRVRQSALDEEAAVAQTLAFLADWVPAGKSPICGNSIGQDRRFLFRYMPALEAYFHYRYLDVSTLKELARRWKPEILSGLKKNNTHQALDDIRESVAELAYYREHFIRL", - "output": "cytoplasm ; 3'-5'-RNA exonuclease activity ; nucleic acid binding" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MSRVGKKIIDIPSDVTVTFDGSHVTVKGPKGELERTLNERMTFKQEENTVEVVRPSDSKEDRTDHGTTRALLNNMVLGVSQGYEKTLELVGVGYRAQMQGKDLVLNVGYSHPVEIKAEEGITFAVEKNTTVKVSGVSKEQVGAIASNIRSVRPPEPYKGKGIRYQGEYVRRKEGKTGK", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MDYNVKDFGALGDGVSDDTAAIQAAIDAAYAAGGGTVYLPAGEYRVSGGEEPSDGCLTIKSNVHIVGAGMGETVIKLVDGWDQDVTGIVRSAYGEETSNFGMSDLTLDGNRDNTSGKVDGWFNGYIPGEDGADRDVTLERVEIREMSGYGFDPHEQTINLTIRDSVAHDNGLDGFVADFQIGGVFENNVSYNNDRHGFNIVTSTNDFVLSNNVAYGNGGAGLVVQRGSSDVAHPYDILIDGGAYYDNGLEGVQIKMAHDVTLQNAEIYGNGLYGVRVYGAEDVQILDNYIHDNSQNGSYAEILLQSYDDTAGVSGNFYTTTGTWIEGNTIVGSANSTYGIQERDDGTDYSSLYANSVSNVQNGSVRLYGANSVVSDLPGTGQQATLEGTAGNDTLGGSDAHETLLGLDGNDRLNGGAGNDILDGGAGRDNLTGGAGADLFRVSARTDSYRTDSASFNDLITDFDASQDRIDLSALGFTGLGDGYNGTLLLQVSADGSRTYLKSLEADAEGRRFEIALDGNFAGLLGAGNLLFERTAIEGDAGDNALLGTSAAETLLGHAGNDTLDGGAGDDILVGGAGRDSLTGGAGADVFRFDALSDSQRNYDIGDNQGDRIADFAVGEDKLDVSALGFTGLGDGYNGTLALVLNSAGDRTYVKSYENGADGYRFEFSLDGNYLELLGNEDFIFATPSGQQLLEGSAGNDSLQGTAADEVIHGGGGRDTLAGGAGADVFRFSELTDSYRDSASYADLITDFDASEDRIDLSGLGFSGLGNGYGGTLALQVNSAGTRTYLKSFETNAAGERFEIALDGDLSALGGANLILDARTVLAGGDGNDTLSGSSAAEELLGGVGNDSLDGGAGNDILDGGAGRDTLSGGSGSDIFRFGGALDSFRNYASGTNGTDSITDFTPGEDLIDLSVLGYTGLGDGYNGTLAIVLNDAGTKTYLKNRESDAEGNQFEIALEGNHADQLDASDFIFATAAATTGIEVVGGSGTQTDQLA", - "output": "extracellular region ; calcium ion binding ; isomerase activity ; alginic acid biosynthetic process" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MSSSNQNLAIAANAIDITAPESTIPNKSKVPNKSAESSQSTVPKAPSRREIRAQAQAFIDTLAPLQHTNSQKVYLEGSSADIRVGMRQILQTDTLVGGTDDAPIMEKNPPIRVYDCAGPYSDPEADINVRLGLVKLRQNWILARKDTEQLPCATSDFTQQRLADDGLDHLRFEAGSSAIVRPRRALQGKRVSQLHYARQGIITPEMEYVAIRENMALAEVQDEILNRKAKGEAFGALVGEPITAEFVRAEVARGRAIIPLNINHPEAEPMIIGRNFLVKVNANIGNSAVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWIIRNSPVPIGTVPIYQALEKVNGVAEDLTWEVFRDTLIEQAEQGVDYFTIHAGVLLRYVPMTAKRVTGIVSRGGSIMAKWCLSHHKENFLYSHFREICELCVAYDVSLSLGDGMRPGSIADANDAAQFAELETLGELVKIAWEYDVQTIIEGPGHIPMQLIKENMDKQLAHCGEAPFYTLGPQITDIAPGYDHFTSGIGAAMIAWYGCAMLCYVTPKEHLGLPNKQDVKQGLIAYKIAAHAADVAKGHPSAQIRDNALAKARFEFRWEDQYNLGLDPETARAYHDESLPQESAKVAHFCSMCGPKFCSMKITQDVRAYAAGLEAAQTKAEQVEAAAQAMQVTIKTPQELEAAMALKSAQFAASGAEIYQVIDKHVKDKLVAEAEEA", - "output": "4 iron, 4 sulfur cluster binding ; carbon-carbon lyase activity ; zinc ion binding ; thiamine biosynthetic process ; thiamine diphosphate biosynthetic process" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MKLAQDMNVDEIFLKQAAEAIAVISSSPTHTDPIIRELLHRIRQSSPLSAVIPAPENVLKAGEPENMARGLIRIPETQTKRTGGNNHSKEGAQLYSCAKCQLKFSRSSDLRRHEKVHSLVLPHICSNCGKGFARKDALKRHSNTLTCQRNRKKLSEGSDVDVDELIKDAIKNGTGLL", - "output": "cytoplasm ; nucleus ; transcription regulator complex ; cis-regulatory region sequence-specific DNA binding ; DNA-binding transcription factor activity, RNA polymerase II-specific ; metal ion binding ; negative regulation of transcription by RNA polymerase II ; positive regulation of transcription by RNA polymerase II ; regulation of sulfur amino acid metabolic process ; regulation of sulfur metabolic process ; regulation of transcription by RNA polymerase II" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MARITILPDILCNQIAAGEVVERPAAVAKELLENSIDAGARRISLSIADGGRKEIRVVDNGSGMHPDDALLALERHATSKIRSIEDLQAIGSLGFRGEALPSIAAVSRFELVTREPDAVAGTFIRVEGGVVREVRETGSPAGTRITVRDLFYNVPARRKFLRAADTETAYICDQFQRLAMAHHAVHFQLINRERTQYDFPGAASPEERAGQVLGAETLKRAIPFCVENASARLRGMVGTPDLQRANSHSLFVFVNGRPVWDRAVNRAILAAFESLIPRGKFPVAVLFLELDPLHVDVNVHPTKREVRFKHPGGVIDTVRGAIRDALCHLRPLHGSAAAAPRPFSETADQRAFRDSLVREGQLSFDRGRPLSRPPGFPSERWRERHRPDAEPPYPLLREPAPTENPRREAGSPPAAPADSLFDEGAAPQPDNPDTDFFAEPKRAAGGPASTHAPVTVDTAAFADAFQAFEAATHLHAGDVPALAELPVIGQLANTYILLEAPDGLILIDQHAAHERIIFDALSFPAGGPARQRLIRPAVIDLPPRDAAMLRRWLPLLEEIGVEIESFGGDSFVVHAVPAPLGECPPEGLVRELLASAIEGDDAPRWNVLGRLAKTAACHRAVRAGQRLRPEEIRLLLEGLDRTRFASTCPHGRPVWYKMTLSDVARLFQRT", - "output": "mismatch repair complex ; ATP binding ; ATP hydrolysis activity ; ATP-dependent DNA damage sensor activity ; mismatched DNA binding ; mismatch repair" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGIDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANKTDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVLLPWMEDLAPQEEVDEDAEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVMGSPIRIQFKEGENPYANKRNTLTPTQMRKRKRLMKHIKKNK", - "output": "GTP binding ; ribosome biogenesis" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MKKKTIFQCVILFFSILNIHVGMAGPEQVSMHIYGNVVDQGCDVATKSALQNIHIGDFNISDFQAANTVSTAADLNIDITGCAAGITGADVLFSGEADTLAPTLLKLTDTGGSGGMATGIAVQILDAQSQQEIPLNQVQPLTPLKAGDNTLKYQLRYKSTKAGATGGNATAVLYFDLVYQ", - "output": "pilus ; cell adhesion involved in single-species biofilm formation" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MTTSTLQAPTRGWFDVLDDWLKRDRFVFVGWSGLLLFPTAYLAIGGWLTGTTFVTSWYTHGLASSYLEGANFLTAAVSTPADAMGHSLLLLWGPESQGDFIRWCQLGGLWAFVALHGAFALIGFMLRQFEISRLVGIRPYNAIAFSGPIAVFVSVFLIYPLGQSSWFFAPSFGVAAIFRFLLFLQGFHNWTLNPFHMMGVAGILGGALLSAIHGVTVENTLYEDGEQANTFKAFDTTQEEETYSMVTANRFWSQIFGIAFSNKRWLHFFMLFVPVMGLWTSSIGIIGLALNLRAYDFVSQEVRAAEDPEFETFYTKNILLNEGLRAWMAPVDQPHENFVFPEEVLPRGNAL", - "output": "host thylakoid membrane ; photosystem II ; chlorophyll binding ; electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity ; metal ion binding ; photosynthetic electron transport in photosystem II" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MCNHHPKHSHGNDTIRIRGARTHNLKNVDLDIPRHKLVVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLQMMDKPDVDLIEGLSPAISIEQKSTSHNPRSTVGTVTEIHDYLRLLYARVGTPYCPEHKLPLSSQTVSQMVDAVLKLPEDTRVMILAPAVRERKGEFVDFFADLQAQGFARVRVDGEVYQLDEVPKLEKNIKHNIDVVIDRVKVKADIKQRLAESFETALRHGNERALAMEMDSGEEHWFSARFACPVCSYSLPELEPRLFSFNNPMGSCPTCDGLGNTNFFDPEKVVAHPELSLASGAIDGWDKRNQFYFQMIQSLARHYGFDVQAAWETLPAKIKKVVLHGSGKEVIDFTYLSERGTTFNRSHAFEGIIPNLERRYRETDSETVREKLREYQNHRACPSCGGARLRKEARYVYVSGEPLHEVSAWPLTKTHRFFETLDLDGNKKQIAEKILKEITERLGFLINVGLDYLNLSRSAETLSGGEAQRIRLASQIGSGLTGVMYVLDEPSIGLHQRDNDRLLATLKRLRDLGNSVIVVEHDEDAIREADFVVDMGPGAGEHGGNVLIADTPENVAKCENSVTGQYLSGKKSIAVPSERTPVNPGRMLVLKGARGNNLKNVTLELPLGLITCITGVSGSGKSTLINDTLAKITARELNRAQEEPAPYDDIRGLEHLDKVINVDQSPIGRTPRSNPATYTGLFTPIRELFASVPLSRERGYNVGRFSFNVKGGRCEACQGDGVIKVEMHFLPDVYVPCEVCHGKRYNRETLEIQYKGKNISQVLDMTVEEACEFFDAVPTVSRKLQTLMDVGLGYIRLGQSATTLSGGEAQRVKLALELSKRDTGRTLYILDEPTTGLHFADIALLLEVIGRLKGKGNSIVIIEHNLDVIKTADWIVDLGPEGGDGGGRIIASGSPEEVAKVKGSYTGKYLKNIL", - "output": "cytoplasm ; excinuclease repair complex ; ATP binding ; ATP hydrolysis activity ; DNA binding ; excinuclease ABC activity ; zinc ion binding ; nucleotide-excision repair ; SOS response" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MNEVLAKGKKAKEIARELVLKSTEQKNEALSAIADQLILETAYILEENKKDIEEGKAKGFSDSLLDRLMLNEQRIVDMTEGIKQLIELRDPVGECVSAWERPNGLSIQEMRVPLGVVGMIYEARPNVTVDAATICLKTGNAVILRGSSSAIHSNKAIVAVIHRALKQTSLPQESVQLIEDTTRDSAKQLFTMNDYLDVLIPRGGKQLIDTVVREASVPVLETGAGNCHVFIDETADKQMAFDIINAKTQRPSVCNAIETIVLHEKWAEQYGSELFSSLKKRGVELRGDQKALAMDSTIVLASEEDWGTEFLSLTPAVKLVSSIEEAIHHINTYGSMHSEAIISENEEKVSKFFVSVDAAALYHNASTRFTDGSEFGSGAEIGISTQKLHVRGPMGLPALTSTKYVIRGNGQIRK", - "output": "cytoplasm ; glutamate-5-semialdehyde dehydrogenase activity ; NADP binding ; L-proline biosynthetic process" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MSNEPTSSFYELRLPPSDGISSVNFCPNSVNLLVTSWDSTVRCYDTQNNVQKWQYNHKGPVMDGCFPEKNKVFSGDVFGSVKHYDPVAGVEKEVGSHEDGVRSVVYNSDTQQLFTGGWDQQLKLWDIRSDKMEISNHDLQSKIFTMDVSPISNMLVIGTADKYVTIYDTRQMETHLQKRESSIKYQTRCIRTFTDGKGYALASVEGRIAMEYFDPSPAVQSKKYAFKCHRLTESGVDVVYPVNCIAFNPHYGTFATGGCDKNVFFWDGANRKRLHALKTYPTSISSMSFNTDGNILAVASSYTFEEGEKDHPPDQIFIHNILSEKIIKPIK", - "output": "bub1-bub3 complex ; kinetochore ; mitotic checkpoint complex ; ubiquitin binding ; cell division ; mitotic spindle assembly checkpoint signaling" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MPVVKTKPTSPGRRHVVAVTNPSLHKGAPLASLTEKKRKNGGRNNAGRITVRHQGGGHKQLYRVIDFKRTKDGIPAVVERLEYDPNRTAHIALLKYADGERRYIIAPKGVSVGDAIASGQEAPIRVGSCLPLRNIPVGSVVHCIEMKPGKGAQIARSAGASAQVVAREGAYATIRLRSGEMRKVLVECRATLGEVSNSENNLRVYGKAGAKRWRGVRPTVRGTAMNPVDHPHGGGEGRNFGKHPVTPWGVPTKGYKTRKNKRTDKMIVRRRKAK", - "output": "large ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; transferase activity ; translation" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MRLFLLALLATLAVTQALVKEEIQAKEYLENLNKELAKRTNVETEAAWAYGSNITDENEKKKNEISAELAKFMKEVASDTTKFQWRSYQSEDLKRQFKALTKLGYAALPEDDYAELLDTLSAMESNFAKVKVCDYKDSTKCDLALDPEIEEVISKSRDHEELAYYWREFYDKAGTAVRSQFERYVELNTKAAKLNNFTSGAEAWLDEYEDDTFEQQLEDIFADIRPLYQQIHGYVRFRLRKHYGDAVVSETGPIPMHLLGNMWAQQWSEIADIVSPFPEKPLVDVSAEMEKQGYTPLKMFQMGDDFFTSMNLTKLPQDFWDKSIIEKPTDGRDLVCHASAWDFYLTDDVRIKQCTRVTQDQLFTVHHELGHIQYFLQYQHQPFVYRTGANPGFHEAVGDVLSLSVSTPKHLEKIGLLKDYVRDDEARINQLFLTALDKIVFLPFAFTMDKYRWSLFRGEVDKANWNCAFWKLRDEYSGIEPPVVRSEKDFDAPAKYHISADVEYLRYLVSFIIQFQFYKSACIKAGQYDPDNVELPLDNCDIYGSAAAGAAFHNMLSMGASKPWPDALEAFNGERIMSGKAIAEYFEPLRVWLEAENIKNNVHIGWTTSNKCVSS", - "output": "extracellular space ; plasma membrane ; carboxypeptidase activity ; metal ion binding ; metallopeptidase activity ; peptidyl-dipeptidase activity ; metamorphosis ; peptide hormone processing ; proteolysis ; response to symbiotic bacterium ; sexual reproduction" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MKFSTAIIVSFLFIADFCAAQSGVLDISKFGGKPNSDIGQALTSAWNEACASTTAAKIVIPAGTYQLNGIELKGPCKAPIELQVDGTIQAPADPSVIKGTEQWFKFLYMDHLTLSGKGVFDGQGATVYKKAAPASAWSGKNSNSKVFMNFGFNFVNNSIVRGVTSKDSKNFHVMVFGCKNITFDGFTITAPGDSPNTDGIHMGKSTDVKILNTNIGTGDDCVSIGDGSKQITVQGVNCGPGHGLSVGSLGKFTTEENVEGITVKNCTLTATDNGVRIKTWPDAPGTITVSDIHFEDITMTNVKNPVIIDQEYYPWNQCSKKNPSKIKLSKISFKNVKGTSGTAEGVVLICSSAVPCDGVELNNVDLKFNGAPTTAKCTNVKPLVTGTAPVCQAPGAPAASTTATPAASKTATPAAGKSPAK", - "output": "extracellular region ; polygalacturonase activity ; carbohydrate metabolic process ; cell wall organization" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MQPGATTCTEDRIQHALERCLHGLSLSRRSTSWSAGLCLNCWSLQELVSRDPGHFLILLEQILQKTREVQEKGTYDLLTPLALLFYSTVLCTPHFPPDSDLLLKAASTYHRFLTWPVPYCSICQELLTFIDAELKAPGISYQRLVRAEQGLPIRSHRSSTVTVLLLNPVEVQAEFLAVANKLSTPGHSPHSAYTTLLLHAFQATFGAHCDVPGLHCRLQAKTLAELEDIFTETAEAQELASGIGDAAEARRWLRTKLQAVGEKAGFPGVLDTAKPGKLHTIPIPVARCYTYSWSQDSFDILQEILLKEQELLQPGILGDDEEEEEEEEEVEEDLETDGHCAERDSLLSTSSLASHDSTLSLASSQASGPALSRHLLTSFVSGLSDGMDSGYVEDSEESSSEWPWRRGSQERRGHRRPGQKFIRIYKLFKSTSQLVLRRDSRSLEGSSDTALPLRRAGSLCSPLDEPVSPPSRAQRSRSLPQPKLGTQLPSWLLAPASRPQRRRPFLSGDEDPKASTLRVVVFGSDRISGKVARAYSNLRRLENNRPLLTRFFKLQFFYVPVKRSHGTSPGACPPPRSQTPSPPTDSPRHASPGELGTTPWEESTNDISHYLGMLDPWYERNVLGLMHLPPEVLCQQSLKAEAQALEGSPTQLPILADMLLYYCRFAARPVLLQVYQTELTFITGEKTTEIFIHSLELGHSAATRAIKASGPGSKRLGIDGDREAVPLTLQIIYSKGAISGRSRWSNLEKVCTSVNLNKACRKQEELDSSMEALTLNLTEVVKRQNSKSKKGFNQISTSQIKVDKVQIIGSNSCPFAVCLDQDERKILQSVVRCEVSPCYKPEKSDLSSPPQTPPDLPAQAAPDLCSLLCLPIMTFSGALP", - "output": "centriolar satellite ; cytoplasm ; cytosol ; membrane ; nucleus ; phosphatidylinositol 3-kinase complex ; phosphatidylinositol 3-kinase complex, class IA ; phosphatidylinositol 3-kinase complex, class IB ; plasma membrane ; 1-phosphatidylinositol-3-kinase regulator activity ; G-protein beta/gamma-subunit complex binding ; G protein-coupled receptor signaling pathway ; immune response ; phosphatidylinositol 3-kinase signaling ; positive regulation of MAP kinase activity ; positive regulation of protein kinase B signaling ; regulation of phosphatidylinositol 3-kinase activity" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MRIRVSYLLVLCFTLIWFRWTVVYSSFSDLDALLKLKESMKGAKAKHHALEDWKFSTSLSAHCSFSGVTCDQNLRVVALNVTLVPLFGHLPPEIGLLEKLENLTISMNNLTDQLPSDLASLTSLKVLNISHNLFSGQFPGNITVGMTELEALDAYDNSFSGPLPEEIVKLEKLKYLHLAGNYFSGTIPESYSEFQSLEFLGLNANSLTGRVPESLAKLKTLKELHLGYSNAYEGGIPPAFGSMENLRLLEMANCNLTGEIPPSLGNLTKLHSLFVQMNNLTGTIPPELSSMMSLMSLDLSINDLTGEIPESFSKLKNLTLMNFFQNKFRGSLPSFIGDLPNLETLQVWENNFSFVLPHNLGGNGRFLYFDVTKNHLTGLIPPDLCKSGRLKTFIITDNFFRGPIPKGIGECRSLTKIRVANNFLDGPVPPGVFQLPSVTITELSNNRLNGELPSVISGESLGTLTLSNNLFTGKIPAAMKNLRALQSLSLDANEFIGEIPGGVFEIPMLTKVNISGNNLTGPIPTTITHRASLTAVDLSRNNLAGEVPKGMKNLMDLSILNLSRNEISGPVPDEIRFMTSLTTLDLSSNNFTGTVPTGGQFLVFNYDKTFAGNPNLCFPHRASCPSVLYDSLRKTRAKTARVRAIVIGIALATAVLLVAVTVHVVRKRRLHRAQAWKLTAFQRLEIKAEDVVECLKEENIIGKGGAGIVYRGSMPNGTDVAIKRLVGQGSGRNDYGFRAEIETLGKIRHRNIMRLLGYVSNKDTNLLLYEYMPNGSLGEWLHGAKGGHLRWEMRYKIAVEAARGLCYMHHDCSPLIIHRDVKSNNILLDADFEAHVADFGLAKFLYDPGASQSMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIIGRKPVGEFGDGVDIVGWVNKTMSELSQPSDTALVLAVVDPRLSGYPLTSVIHMFNIAMMCVKEMGPARPTMREVVHMLTNPPQSNTSTQDLINL", - "output": "plasma membrane ; ATP binding ; protein serine kinase activity ; protein serine/threonine kinase activity ; cell differentiation ; protein phosphorylation" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MAGVLGMILAGGEGSRLRPLTESRSKPSVPFGGSYRLIDFALNNFVNADLMRIYVLTQFKSQSLFHHLKKGWNINGITDRFIDPIPAQMRTGKRWYEGTADAIYQNLRFMELEEPDQVCIFGSDHIYKMDIKQMLNFHTEKKASLTVSALRMPLKEASQFGVIEVDAEGRMIGFEEKPANPKSIPGEPDFALVSMGNYVFEAQVLFSELVEDADNEASSHDFGKDIIPKMFPRGDVFVYDFSTNRISGEKEEVYWRDVGTIDAYWQAHMDLLEKDAPFSLYNRKWPLHTYYPPLPPATFTDSDNGRVQIIDSLVCNGSYVRGSRIEKSVLGFRSNIASACDISECILLGDVKIGEGCVLRRVIVDKDADIAPGTQIGVNLQEDKKHFHVSEEGIVVIPKGARVGY", - "output": "ATP binding ; glucose-1-phosphate adenylyltransferase activity ; glycogen biosynthetic process" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MALTNEDIINAVSEMSVMQVVELIKAMEEKFGVTAAAATVAAAGPAAAAAEEQTEFTIVLAEAGDKKVNVIKVVRELTGLGLKEAKAVVDGAPGVVKEGASKEEAEAAKKALEEAGAKVELK", - "output": "cytosolic large ribosomal subunit ; mRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MLYFLLQPLARDVRLFNLLNYITFRAAAAFVTALLVSFILGPAIIRRLRAMAVHQVVREGTPDTHAGKGTTPTMGGLIILAATFAPVLLWSRLSNRYVLLAMAVTAWMGVIGFLDDYLKLKQKREGKKNEGLVERYKLAGQVLCGLGLGAYLLLSPISTLPGASTTLPFFKYVLVVPAVAWAAWLYIPWVTFILTGVSNAVNLTDGLDGLSSGLVAIAVLTLGLFAYVLGRVDTSAYLQVFYLRGAGELTVFCAAVVGACIGFLWYNAHPAQVFMGDTGSLALGGAVGAIAILLKSEFLLLFVGAVFFAETVSVILQRTVFKYRLRRYGREYAQKHRVFRRAPLHHHFEMMGWPETQVVVRFWIIGILCAILALSTLKLR", - "output": "plasma membrane ; metal ion binding ; phospho-N-acetylmuramoyl-pentapeptide-transferase activity ; UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate transferase activity ; cell cycle ; cell division ; cell wall organization ; peptidoglycan biosynthetic process ; regulation of cell shape" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MFFRNLTLFRFPTTLDFSQIDTLLPPVQLKPVGPLEMSSRGFISPFGRDEQGVLSHRLEDFLWLTVGGEDKILPGAVVNDLLERKVAEIEEKEGRRPGGKARKRLKDDLIHELLPRAFVKSSRTDAILDLQHGYIAVNSSSRKSGENVMSEIRGALGSFPALPLNAEVAPRAILTGWIAGEPLPEGLSLGEECEMKDPIEGGAVVKCQHQELRGDEIDKHLEAGKQVTKLALVLDDNLSFVLGDDLVIRKLKFLDGALDQLEHSEDDGARAELDARFTLMSAEIRRLFLLLETALKLSKAE", - "output": "cytoplasm ; nucleoid ; DNA recombination" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MSDGGKSSSSYFHFFAGLNSGILSAVLLQPADLLKTRVQQSRSSTLFGTIQSIASGPNPVRQFWRGTLPSTLRTGFGSAIYFSSLNALRHRASLGAAGRADAAAKGAEHSSSLPKLSNTANLATGAFARTWAGFIMMPITVLKVRYESNLYAYNSLFTASRDIFRTEGLKGFFAGFGATAVRDAPYAGLYVLFYEQSKRKLSSLATKIEQTSGASTKLSTSTSAGINFVSGVAAAGLGTTITNPFDAIKTRIQLMPERYGNMVQATKKMYMEEGLRCFFDGLGIRIARKAVSSALAWTLYEELIRRAETLKEVVEDKI", - "output": "mitochondrial inner membrane ; glycine transmembrane transporter activity ; glycine import into mitochondrion ; heme biosynthetic process" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MMQPLYLVGPRGCGKTTIGMALAQATGFRFADTDRWLQSHVQMSVADIVEKEGWGGFRARETAALEAVSAPSTVVATGGGIILTEYNRRYMHRVGVVIYLCAPVSTLVNRLEAEPEADLRPTLTGKPLSEEVREVLEQRDALYRETAHYIIDATKAPAQVVSEIIAALPPSTQRLQGDVYT", - "output": "cytoplasm ; ATP binding ; magnesium ion binding ; shikimate kinase activity ; amino acid biosynthetic process ; aromatic amino acid family biosynthetic process ; chorismate biosynthetic process ; phosphorylation" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MTRTGPPINPISWDTKTIVPDDGSRIDSVACQDARPKGRIRRSMTACHTCRKLKTRCDVDPRGHSCRRCLSLRLDCELPETTERFQDNASTWSDATAVPSIEERLVSLERGMGEMIHLMRQIVKSSPSMPCSPTFQTRNHSIDGTSSSDSMSSSFYPLKPAQLIRDLQAECFGERAHFSDADILGDIVTQGIVDSKLSVKLIELFVEHFGHWVSINHSSSLQRSNTLLFNTACLLASRYMPGLPQHTVRDISLYVQHAVAKVLWKPPPMTSDMLQALTLLCLYSTSIHKEGLMDDWLLSGISINHALISFNFLNTLPGDNLSPDELLAQLRLWNTLCATQLHSALANGRTVNIQQQYINQCPRILEHAGATPEDGRIVAEIQLYRIALRLQHSQSRLQFAESEYEELERWRMEWAHLLTTNGDSTLNLNLWFCQLLLHRTAARLQPDSERLLPEICGTARLIITQFLQTRFTSAPALIDHVYFIVGYAALTLCDYTLTDPLINQVRGFLLHLAPGGDNLSYRIACIVGEVQRRYSEATAVVAAGSHSSSPVAEVKGAQMFGSSHHHRTGMELSQLMSSPEGLDSLVEGYNCLEQMMPGYAASQPAFEAPDLFHHSPTTGVTGGAMPIGLVPRALHDW", - "output": "nucleus ; DNA binding ; DNA-binding transcription factor activity, RNA polymerase II-specific ; zinc ion binding" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MIEVFLFGIVLGLIPITLAGLFVTAYLQYRRGDQLDL", - "output": "chloroplast thylakoid membrane ; cytochrome b6f complex ; electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity ; cytochrome complex assembly ; photosynthesis" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MRSKLGTHFKKASVISGSVTQSKVNQSTFSRSIIGTSSRKSLNLHAESKMGERNLSMVSKQSIKIFDDDGKDVSPQPLFQAEPGTVPQKQNKLFTPPDASGIGASDIFSSISLQHTAFNASFVGPFTRSTFGASTVSRSSKETESMTEDIEETGFKREIASLSEIQGKQHEMQPTEEDLDKIINIFLTDTETLWLLDMPPALTATDSENADLVRVRNQAYEDLCKDKVGNDKYIERMMQTFSGAPKNKEVQCDRIILEDTGVMASVWDLYDSYLSPESLPMKEAVDRAIETKNISSSRLSESRGTQSMNSLGRGDSFSSSIADIERLALTRIPDEVEPDSEEILKSEKFLQDLFFMERVVVENTFQSRLAAYRQLPVIADPDEDEDKISAMPSNIVSPSLNRLWSFACDVTKGHNVSSMSWNKKNSDLLAVGYGQFGFAEQKGGMACCWSLKNIMWPERIFHCECGVTAVDFSAVHPNLLAVGMYNGTVAIYNVQNNEDFPVLDSSDNPNKHTSPVWQLKWIEHDRGNLGDDKGEILVSVCADGRITRWHIRKGLDCNDLMKLKRTGSGKSKKSSNEKERKGEAFISRQAPGMCFDFLPKDSNIYLAGTEEGHIHKCSCSYNEQFLDTYRGHKGPVYKIVWSPFCPDVFLSCSADWCIHLWQQDVLLPILTFSNTTNAVYDIMWSPSSALMFGAVSENRVEIWDLGVSIIDPVIVNEANPGVKLTSILFAKNTDCVLIGDSD", - "output": "cytoskeleton ; dynein axonemal particle ; motile cilium" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MPPKTRSTARRSGRRVVKKNVAQGHAYIKSTFNNTIVSITDPSGAVIAWASSGHVGFKGSRKSTPFAAQLAAENAARKAMDHGMKKVDVFVKGPGSGRETAIRSLQAAGLEVTSISDVTPQPFNGCRPPKRRRV", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MFGDSDGSKDANPGAPPSTTDPPFPNRELTLSSYLCEKPTLASAAAGGGGGAGPSSPPNPAAAAAGDDGKHCVERDFLHLSAPKRGDPPGDDSSVVGGKKPRLDSLQLSLSLNSDGPAAPPSSQPPLASLLQPVPATDGDLRGAAAAAAVPAAPARRTYSATTARTRSINSDDMSYSYSIFSHNPSCSLTHNSTDIYAAGEGTNGSVHSRFNFRPMGDGSVAFATPPLKEGTSSFFPTELPARMAAAAAAAAASAGGSFDGGRGGLHASRPDKILRDIVSDSVTAMAQVLQDFPSERLELLREAVRGMIDSHEKRDELASLQRKLERRSDLTTETLGRANRTQLEILVAIKTGIATFVTGKGRVPSSELVEMFLMTRCRNLNCKSTLPVDDCDCKICSTKKGFCSACTCSVCHKFDCAANTCTWVGCDVCGHWCHVACALERNLIRPGPTLKGPIGTTEMQFQCLACNHSSEMFGFVKEVFNCCAENWNAETLMKELDFVRKIFAGCEDFEGKGLHAKAEEVLSLLGKKIISPLDATNSILQFFKYGVTDYSVTGSTSKGILAAQASQSTDMRSLQTPTITPPKSSFNFKTTTSILDTDALKPSPKPLSIEPHFSTASKEDDSSLETIVKCKEAEAKLFQKLADDARKEVDSYRQIVRSRTQKLEEEYAAKLAKVCFQETEEKRRKKLEELKMLENSHYDYLKMKMRMQTDIQGLLERMEATKKMWV", - "output": "nucleus ; metal ion binding ; cell fate specification ; embryonic pattern specification ; inorganic cation import across plasma membrane ; maintenance of root meristem identity ; maintenance of shoot apical meristem identity ; regulation of gene expression ; root meristem specification" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MELAKSFEPGNIENRWYDRWEAAGYFKPSMDTDRPSFCIQLPPPNVTGTLHMGHAFNQTIMDGLTRYYRMKGDNTLWVPGADHAGIATQIVVERQLAEQGVSRHDLGRDTFIGKVWEWKEKSGGTITSQMRRVGCSVDWDKEYFTMDDKMSTAVTEVFVRLYEQGLIYRGKRLVNWDPKLGTAVSDLEVISEEEDGKMWHIRYPVVGSDDVVVVATTRPETLLGDVAVAVNPDDERYRHLVGKQLELPLTGRTIPVIADDYVDAAFGTGFVKITPAHDFNDYQVGKRHNTALINVMSLDATMLAKAQVFGFDGSAQGSIDLPAAYAGLSTADARKAMLADLDAAGLLVDTKPHKLMVPRGDRTGSVIEPLLTDQWFVAMTKVGEGDATGKSITQKAIDAVESGEVRFVPENWVNTYNQWMNNIQDWCISRQLWWGHQIPAWYDEDGKAYVGRTLEEVQAKAPGKTLRRDEDVLDTWFSSALVPFSSLGWPNETPELKAFVPSQVLVTGYEIIFFWVARMIMMTTHFLGKVPFKDVYIHGIVRDHEGKKMSKSEGNVIDPVDLIDGIALPELITKRTTGLRRPEKAPQIVKATEKLFPEGIPAYGTDALRFTMASYASLGRSVNFDFKRAEGYRNFCNKLWNATRFVMMNVEGKDCGQDESLPLEYSFVDKWIISRLQELEAAVTEALDTYRFDMASQLIYEFVWNEYCDWYVELAKVQLANGNEAQQRATRRTLVRVLEVALRLTHPLMPFITEELWQTVAPLANAKKTDSIMVAAWPVADMSKVDAEACGRMTVFKELVNAIRNLRGEMNLGPSVKAPLFVEGPAAYADFLPYARLLGRLSDAAVVEKLPDADAPVAIAGEARLMLKVEIDKAAETARLTKEIGKAESDVEKLTAKLEKPGYVDKAPAQLVERDRAQLADLTDKLAKLKAQLLKLA", - "output": "cytoplasm ; aminoacyl-tRNA editing activity ; ATP binding ; valine-tRNA ligase activity ; valyl-tRNA aminoacylation" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MKKSLSLVLASGSPRRKELLAQLGYDFDIVLPDIEEAKQADEQAQDYVLRLSLEKAQAGLALAKPDSVVLGSDTVVVCDDRVLEKPKSFEDSKRMLTDLSGRRHQVMTAVSVVSSEQQHSVVVTTDVWFKPLTHEEIEQYWQSGEPCDKAGSYGIQGLGGRFVTRIEGSYHAVVGLPLFETDQLIQEFL", - "output": "cytoplasm ; dTTP diphosphatase activity ; UTP diphosphatase activity ; nucleotide metabolic process" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MLAKGLPPRSVLVKGCQTFLSAPREGLGRLRVPTGEGAGISTRSPRPFNEIPSPGDNGWLNLYHFWRETGTHKVHLHHVQNFQKYGPIYREKLGNVESVYVIDPEDVALLFKSEGPNPERFLIPPWVAYHQYYQRPIGVLLKKSAAWKKDRVALNQEVMAPEATKNFLPLLDAVSRDFVSVLHRRIKKAGSGNYSGDISDDLFRFAFESITNVIFGERQGMLEEVVNPEAQRFIDAIYQMFHTSVPMLNLPPDLFRLFRTKTWKDHVAAWDVIFSKADIYTQNFYWELRQKGSVHHDYRGILYRLLGDSKMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQGDMATMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDPENFDPTRWLSKDKNITYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENFRVEIQHLSDVGTTFNLILMPEKPISFTFWPFNQEATQQ", - "output": "mitochondrial inner membrane ; mitochondrial matrix ; mitochondrion ; cholesterol monooxygenase (side-chain-cleaving) activity ; heme binding ; iron ion binding ; C21-steroid hormone biosynthetic process ; cellular response to peptide hormone stimulus ; cholesterol metabolic process ; cortisol metabolic process ; glucocorticoid biosynthetic process ; sterol metabolic process ; vitamin D metabolic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MAKPTRKRRVKKNIESGIAHIHATFNNTIVMITDVHGNAIAWSSAGALGFKGSRKSTPFAAQMASEAAAKSAQEHGLKSVEVTVKGPGSGRESAIRALAAAGLEVTAIRDVTPVPHNGARPPKRRRV", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MLNKLSRLLADAGISLTDHQKTLLVAYVDMLHKWNKAYNLTSVRDPNEMLVRHILDSIVVAPYLQGQRFIDVGTGPGLPGIPLAIVLPDAHFTLLDSLGKRVRFLRQVQHELKLENITPVQSRVEAYPSEPPFDGVISRAFASLNDMVSWCHQLPGEKGRFYALKGHLPGDEIASLPDDFSVESVEKLRVPQLEGERHLVIIKSNKV", - "output": "cytoplasm ; rRNA (guanine-N7-)-methyltransferase activity" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MLIFEGKEISTDSEGYLKETTQWSEALAVAIAANEGIELSAEHWEVVRFVREFYLEFNTSPAIRMLVKAMANKFGEEKGNSRYLYRLFPKGPAKQATKIAGLPKPVKCI", - "output": "cytoplasm ; sulfur carrier activity ; transferase activity ; tRNA wobble position uridine thiolation" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MWIESDAGVAIDRHARGACSLGEAGCATYCFYQGKHHGGCCGENYTKCLGTCYCNGSGYEYRCHSCDL", - "output": "extracellular region ; membrane ; other organism cell membrane ; lipid binding ; defense response to bacterium ; innate immune response" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MLSIILLLMQLVAADIAVVGPSLDQSFDASGGTAKIPIQWLFTPNTPSQDDFTSLTFSLCSGPNYKIEAFKVIGKLSDIGTTDFEAEVSQSVGANGYYYVQIYAATTDGYTIHYSPRFKLTGMTGSKLPDTLLITAPPTPETRVTTGDLGATIDSKSFDIPYGEQNGKAKFAPMQTQPGTKITATTWSRRYATSAVSFFTSLTATPVQHTTLTPGWSYYISSDYNYAPPAPFPSDNGGWYDPKKRQSFTTRKLNMDKLRKRRQTS", - "output": "extracellular region ; (1->6)-beta-D-glucan biosynthetic process ; cell wall biogenesis ; cell wall organization" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MAEEMRQELSALAAIFCGPHEWEMLSCSETDGAVFRIHTTAEGLAGEDVPLELAFHLPAGYPSCLPGISVNSERLTRAQCVTVKEKLLGEARRLLSEPMVHELVLWTQQNLRHILSQTETESSNGTCTLPESSTVDGGLWMTLLRLDHMRARTKYVKVVEKWASELRLTGRLMFMGKMILILLQGDRSNIKEYLILQKTSKVDVDSSGKKCKEKMISVLSETKVQTEHKRFLAFEVKEYSTLEELQKEFETAGLQELFSECVLGLVK", - "output": "cytoplasm ; nucleus ; negative regulation of NF-kappaB transcription factor activity ; positive regulation of hypoxia-inducible factor-1alpha signaling pathway ; positive regulation of protein sumoylation" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MSPTPIKHYLQFSDLSADEYEYLLDRARILKAKFKNYETWHPLHDRTLAMIFEKNSTRTRLSFEAGIHQLGGHAVFLNTRDSQLGRGEPIEDAAQVISRMVDIIMIRTFGQEIIDRFAKHSRVPVINGLTNEYHPCQVLADVFTYIEQRGTIAGKTVAWIGDANNMAYTWIQAAERLDFTFHFSAPPGYQLDPAMVPDWAASRVKVFDNPLDACQGAHLVTTDVWTSMGFEAENDARKRAFKDWMVTTAMMDRAADDALFMHCLPAHRGEEVEAAVIDGPRSVVWEEAENRLHVQKALMEYLLCGRY", - "output": "cytoplasm ; amino acid binding ; ornithine carbamoyltransferase activity ; arginine biosynthetic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MRTNPTTSRPGISTIEEKSVGRIDQIIGPVLDITFPPGKLPYIYNALIVKSRDTADKQINVTCEVQQLLGNNRVRAVAMSATEGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPIDNLGPVDTSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFQLILSGELDGLPEQAFYLVGNIDEASTKAINLEEESKLKK", - "output": "chloroplast thylakoid membrane ; mitochondrial proton-transporting ATP synthase complex ; proton-transporting ATP synthase complex, catalytic core F(1) ; ATP binding ; proton-transporting ATP synthase activity, rotational mechanism ; proton-transporting ATPase activity, rotational mechanism ; proton motive force-driven mitochondrial ATP synthesis" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MSNDIEFRKLEHLFVCNYCDVEYKKGTLLEDVELIHSGISNCDLEDIDTSINLFGKNLGAPIIVAAITGGHSKAKEINKNIAIAIDELNLGMGVGSQRAALINEELMETYSVVRDYTSSLVLGNLGAVNFIEDGWDEETIHKAVEMIDADGMAIHFNPLQEAIQPEGDYNFKGIEILKDIMENYNKTYNNKSNKKIPFIAKQVGEGFSKEDALLLNGLGFDSIDVGGSGGTSWAAVEYYRIKDEESKKFSKKYLEWGIPTAASILEVKQNFDKPIIATGGIRSGMDIAKSMAIGAQCCGVALPVLKAALRGSEDVIKLIENYIEELKTTMFLMGCDNVNELMNSRYIIKNELKEWI", - "output": "cytoplasm ; FMN binding ; isopentenyl-diphosphate delta-isomerase activity ; magnesium ion binding ; NADPH binding ; oxidoreductase activity ; isoprenoid biosynthetic process" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MSEVEKTYCGFIAIVGRPNVGKSTLLNELLGQKISITSRKPQTTRHRIMGIHTEGPYQAIYVDTPGLHIEEKRAINRLMNRAASSSLGDVELVIFVVEGTHWTADDEMVVNKLRSLQCPVLLAINKVDNVTDKTKLLPHMQFLSQQMNFLDVVPISAEKGMNVDTIASIVRKHMPEAEHHFPEDYITDRSQRFMASEIIREKLMRFLGEELPYSVTVEIEQFVPNERGGYNIHGLILVEREGQKKMVIGNKGSKIKVIGTEARQDMERMFEAKVHLELWVKVKSGWADDERALRSLGYTDDLK", - "output": "cytoplasm ; plasma membrane ; GTP binding ; GTPase activity ; small ribosomal subunit rRNA binding ; ribosomal small subunit biogenesis" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MNISNIKIMLLGSGELGKEFIIAAQRLGIHTIAVDRYKNAPAMQVAHESYVIDMLNSDALEQLILAKNPTYIVPEIEAINTDSLVKLEAHNFNIIPCAKATKLTMDRQGIRALAVQQLNLQTSKFAFANSEQEYLDVIQSIGLPFVIKPVMSSSGKGQSIVKEHNEIKKAWDYAQNGSRGHAKGVIVEQFIDFDYEITLLTVRHKDGTSFCDPIGHIQKDGDYRFSWQPHTMPDTALAKSQEIAKEITDALGGYGVFGVELFIKGDEVFFNEVSPRPHDTGMVTLISQNINEFELHLRAIVGLPIPDIQTLQPSASAAILLEGDTANASICGIDKALADANVDIRIFSKKEIHGKRRMGVVLAKAQNTHIALETSKQALAHIHLTK", - "output": "ATP binding ; ligase activity ; magnesium ion binding ; phosphoribosylglycinamide formyltransferase 2 activity ; phosphoribosylglycinamide formyltransferase activity ; 'de novo' IMP biosynthetic process" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MADQAKLGGKPSDDSNFAMIRDGVASYLNDSDPEETNEWMDSLDGLLQESSPERARYLMLRLLERASAKRVSLPPMTSTDYVNTIPTSMEPEFPGDEEMEKRYRRWIRWNAAIMVHRAQRPGIGVGGHISTYAGAAPLYEVGFNHFFRGKDHPGGGDQIFFQGHASPGMYARAFMEGRLSEDDLDGFRQEVSREQGGIPSYPHPHGMKDFWEFPTVSMGLGPMDAIYQARFNRYLENRGIKDTSDQHVWAFLGDGEMDEPESRGLIQQAALNNLDNLTFVVNCNLQRLDGPVRGNTKIIQELESFFRGAGWSVIKVVWGREWDELLEKDQDGALVEIMNNTSDGDYQTFKANDGAYVREHFFGRDPRTAKLVENMTDEEIWKLPRGGHDYRKVYAAYKRALETKDRPTVILAHTIKGYGLGHNFEGRNATHQMKKLTLDDLKLFRDKQGIPITDEQLEKDPYLPPYYHPGEDAPEIKYMKERRAALGGYLPERRENYDPIQVPPLDKLRSVRKGSGKQQIATTMATVRTFKELMRDKGLADRLVPIIPDEARTFGLDSWFPTLKIYNPHGQNYVPVDHDLMLSYREAPEGQILHEGINEAGSVASFIAAGTSYATHGKAMIPLYIFYSMFGFQRTGDSIWAAADQMARGFLLGATAGRTTLTGEGLQHMDGHSPVLASTNEGVETYDPSFAYEIAHLVHRGIDRMYGPGKGEDVIYYITIYNEPTPQPAEPEGLDVEGLHKGIYLYSRGEGTGHEANILASGVGMQWALKAASILEADYGVRANIYSATSWVNLARDGAARNKAQLRNPGADAGEAFVTTQLKQTSGPYVAVSDFSTDLPNQIREWVPGDYTVLGADGFGFSDTRPAARRFFNIDAESIVVAVLNSLAREGKIDVSVAAQAAEKFKLDDPTSVSVDPNAPEE", - "output": "magnesium ion binding ; pyruvate dehydrogenase (acetyl-transferring) activity ; glycolytic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MSGHSGHDVKYGRHRTRRSFARISEVLELPNLIEIQTASYQWFLDEGLREMFRDISPIEDFAGNLSLEFIDYDLGEPKYSVEESKNRDANYAAPLRVKLRLINKETGEVKDQEVFMGDFPLMTEMGTFIINGAERVIVSQLVRSPGVYFNGKLDKNGKKGFGSTVIPNRGAWLEYETDAKDVVHVRIDRTRKLPVTVLLRALGFGSDQEIIDLIGDNDYLRNTLEKDNTDNAEKALLEIYERLRPGEPPTVDNARSLLVSRFFDPKRYDLASVGRYKINKKLHLKNRLFNQTLAETLVDPETGEIIASKGDILDRRNLDQIIPNLENGVGFRTLRPTDGVMEDSVLVQSIKIYAPNDEEKEINIIGNAYIEENVKHITPSDIISSISYFFNLLHGVGDTDDIDHLGNRRLRSVGELLQNQFRIGLSRMERVVRERMSIQDMTTITPQQLINIRPVVASIKEFFGSSQLSQFMDQTNPLGELTHKRRLSALGPGGLTRERAGYEVRDVHYSHYGRMCPIETPEGPNIGLINSLSSFAKVNKFGFIETPYRRVDPETNRVTDKIDYLTADEEDNYVVAQANSKLDEQGTFTEEEVMARFRSENLAVEKERIDYMDVSPKQVVSVATACIPFLENDDSNRALMGANMQRQAVPLMHPEAPFVGTGMEHVSAKDSGAAVTAKHDGIVEHVEAREIWVRRVSLVDGKEVTGGIDKYTLRKFVRSNQGTCYNQRPNVAEGDRVVKGEILGNGPSMDSGELALGRNVLVAFMTWDGYNYEDAIIMSERLVKDDVYTSIHIEEFESEARDTKLGPEEMTRDIPNVGEDALRDLDERGIIRVGAEVKDNDLLVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGGGGIVLDVKIFTREAGDELPPGVNQLVRVYIVQKRKIHEGDKMAGRHGNKGVISRILPEEDMPFMPDGTPVDIMLNPLGVPSRMNIGQVLELHLGMAARALGIHVATPVFDGANEEDVWSTVEEAGMARDAKTILYDGRSGEAFDNRISVGVMYMIKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEILTIKSDDVVGRVKTYEAIVKGESVPEPGVPESFKVLIKELQSLGMDVKMLSADEEEIEMRDMDDDDFTNQNDAFNIVQPENAAAEKTE", - "output": "DNA-directed RNA polymerase complex ; DNA binding ; DNA-directed 5'-3' RNA polymerase activity ; ribonucleoside binding ; DNA-templated transcription" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MLSDIPRDALLRPLTRNEVVGMLVRLTVFGAATYYSIKWVVDALDPTQKQKSQAKKRAEQLMKQIGVEGVSLTEYEMNIATLLVDPRSIKVTWRDVAGLDEIISEMQDTVILPFQKRHLFSGSKLLQPPKGVLLYGPPGCGKTLIAKATAKASGCRFINLQASTLTDKWYGESQKLTAAVFSLAVKIQPCIIFLDEIDSFLRNRSSMDHEATAMMKAQFMSLWDGLDTGENSQVMVMGATNRPQDVDAAILRRMPTAFHVGLPNAAQREEILRLILSGENLSNAINLKEIASQSEGYSGSDLKELCRDAAMYRVRDYVRKQQMKQIAQQFQLDEEEEHVDSRQLRPVTQLDLLFGLDKMRESKQATATTDPANLREVPLD", - "output": "mitochondrial outer membrane ; peroxisomal membrane ; postsynaptic membrane ; ATP binding ; ATP hydrolysis activity ; membrane protein dislocase activity ; extraction of mislocalized protein from mitochondrial outer membrane" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MNTKTVKSMAGIVLSQISLVALFPLCICYQTHQSTSSVASLSPQFYENSCPNAQAIVQSYVANAYFNDPRMAASILRLHFHDCFVNGCDASVLLDSSGTMESEKRSNANRDSARGFEVIDEIKSALENECPETVSCADLLALVARDSIVICGGPSWEVYLGRRDAREASLIGSMENIPSPESTLQTILTMFNFQGLDLTDLVALLGSHTIGNSRCIGFRQRLYNHTGNNDPDQTLNQDYASMLQQGCPISGNDQNLFNLDYVTPTKFDNYYYKNLVNFRGLLSSDEILFTQSIETMEMVKYYAENEGAFFEQFAKSMVKMGNISPLTGTDGEIRRICRRVNHDV", - "output": "extracellular region ; plant-type cell wall ; heme binding ; lactoperoxidase activity ; metal ion binding ; peroxidase activity ; cell wall polysaccharide catabolic process ; hydrogen peroxide catabolic process ; mucilage extrusion from seed coat ; plant-type cell wall modification ; response to oxidative stress" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MAVWQAASGKVYLPPSTPVARVQSTDEYVQRTNIYYHAYSDRLLTVGHPYFNVYNVQGSKLQIPKVSGNQHRVFRLKLPDPNRFALADMSVYNPDKERLVWACRGIEIGRGQPLGVGSVGHPLFNKVGDTENPNSYKASSTDDRQNVSFDPKQLQMFIIGCAPCIGEHWDKALPCDDGNIQQGSCPPIELINSVIEDGDMADIGYGNLNFKALQQNRADVSLDIVNETCKYPDFLKMQNDVYGDSCFFYARREQCYARHFFVRGGKTGDDIPAGQIDEGSMKNAFYIPPNSSQAQYNNLGNSMYFPTVSGSLVSSDAQLFNRPFWLQRAQGHNNGICWFNQLFVTVVDNTRNTNFSISINSDGTDVSKITDYNSQKFTEYLRHVEEYELSLILQLCKVPLKAEILAQINAMNSNILEEWQLGFVPAPDNSIQDTYRYIDSLATRCPDKNPPKEKVDPYKNLHFWDVDLTERLSLDLDQYSLGRKFLFQAGLQQTTVNGTKTVSSRISTRGIKRKRKN", - "output": "host cell nucleus ; T=7 icosahedral viral capsid ; structural molecule activity ; endocytosis involved in viral entry into host cell ; virion attachment to host cell" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MAITAQMVKELREKTGAGMMDCKKALTETNGDMEKAIDFLREKGIAKAAKKADRIAAEGLTFIETNGNDALILELNSETDFVAKNEGFQTLIKELAAHLLTNKPANVEEAMAQTMENGKKVEEHINEAIAKIGEKLTLRRFEIVSKTDADAFGAYLHMGGRIGVLTVLEGSTDEAAAKDVAMHIAAVNPKYIDRDAVTAEEVEHERQVLTQQALNEGKPEKIVAKMVEGRLGKFFEEICLLDQAFVKNPDMKVRQFVESKGGTLKGFVRYAVGEGIEKREDNFAEEVMNQVKGSN", - "output": "cytoplasm ; translation elongation factor activity ; translational elongation" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MIQMQSILQVADNTGARSLMCIKVLGGSKRRYAGIGDIIKVSVKDVAPRGRVKKGEVYNAVVVRTSKGVRRADGSLIKFDGNAAVLLNAKLEPIGTRIFGPVTRELRTARFMKIVSLAPEVL", - "output": "large ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MNNRDNLHRFLFEEAKIRGELVQLDASWRAVLACHDYPAVVQSQLGQALAATILLSATIKFKGSLILQTQSEGPLQTLVAQATHHRTLRGLARWDGDVPHGSLSETYGSGRLALTIQTEGKNPYQGIVSLEGVNLAEALQTYFSRSEQLRTRLWLVADEQQAVGLFLQELPSQQGHKTDWERIALLASTVTTQEMLSLPSTELLYRLFNEEQVRLFEPEPVSFRCGCSRGRIEQTLAALGREEMESILKEQGIIEVDCEFCNRHYNFDRVDMEQLFTEQVKAPVTSTRH", - "output": "cytoplasm ; unfolded protein binding ; protein folding" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MNLHEYQAKQLFASYGLPVPRGEVAYNVEDALLVASQLSTSRWVVKAQVHAGGRGKAGGVKLVSSKDELAAVAKSMLGTRLVTYQTDARGQPVNAILVEETCEIDKELYLGAVVDRSTRRVVIMASTEGGVEIEKVAHETPEKIFKVVVDPLVGVMPFQCRETAFKLGLKDDQIKQFTHLMMGLGKMFVDCDLSLLEINPLVITKSGQLICLDGKINIDGNALFRQPKLKNMRDVSQEDDRENRASDWELNYIPLDGTIGCMVNGAGLAMATMDVIKLHGGEPANFLDVGGGATKERVSEALKIIVSDEKVKGILVNIFGGIVRCDLIADGILAAVKEVDVKIPVVVRLEGNNAQLGAEILNKSNLNVIAATSLTDAAKKIVAAVSE", - "output": "cytoplasm ; ATP binding ; magnesium ion binding ; succinate-CoA ligase (ADP-forming) activity ; succinate-CoA ligase (GDP-forming) activity ; tricarboxylic acid cycle" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MPSLKDVKVKIAGVKKTKQITKAMNMVASAKLRGAQQRIERFRPYAEKFYGMLGDLASKADGSAHPLLEVRDEIKTCGIVLATSDRGLCGSFNANLISTALKLAKQKAAEGKTVKFYCVGKKGRDTIRKADFEVVTAIADQMGSFDFQLANKLGLEVINHYLTGELDEVVLVYGEFVSTAKQLPITLPILPIASEKKDEAEAAPSKEYIYEPAVEGLLAELLPRFIKVQIYRGLLDTSASEHAARMAAMDNATRSCDDMIGALTLLFNKTRQASITRDLMDIVGGAEALKG", - "output": "plasma membrane ; proton-transporting ATP synthase complex, catalytic core F(1) ; ATP binding ; proton-transporting ATP synthase activity, rotational mechanism ; proton motive force-driven plasma membrane ATP synthesis" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MPKDKAVGIQVSQVSKQFGSFQAVKDVDLTVETGSLVALLGPSGSGKSTLLRLIAGLEQPDSGRIFLTGRDATNESVRDRQIGFVFQHYALFKHLTVRKNIAFGLELRKHTKEKVRARVEELLELVQLTGLGDRYPSQLSGGQRQRVALARALAVQPQVLLLDEPFGALDAKVRKDLRSWLRKLHDEVHVTTVFVTHDQEEAMEVADQIVVMNHGKVEQIGSPAEIYDNPATPFVMSFIGPVNVLPNSSHIFQAGGLDTPHPEVFLRPHDIEIAIDPIPETVPARIDRIVHLGWEVQAEVRLEDGQVLVAHLPRDRYRDLQLEPEQQVFVRPKQARSFPLNYSI", - "output": "ATP-binding cassette (ABC) transporter complex ; ABC-type sulfate transporter activity ; ABC-type thiosulfate transporter activity ; ATP binding ; ATP hydrolysis activity" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MSNVFTHINADGNAHMVDVTEKAVTEREARAEAFIEMASTTLEMIMSGSHHKGDVFATARIAGIQAAKKTSDLIPLCHPLMLTKVEVELEAQPEHNRVRITSLCKLSGKTGVEMEALTAASVAALTIYDMCKAVQKDMVISQVRLLEKRGGKSGHFKAE", - "output": "cyclic pyranopterin monophosphate synthase activity ; Mo-molybdopterin cofactor biosynthetic process" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MSELSIYSEQGGEPVFSTLDSARIQHELSLRGIAFDRCASKAEIALDADQADILSTYAEEIHRIQALGDYPTVDAIRMKPDHPDRQALRQKFLSEHTHAEDEVRLFVEGRGLFCLHIKSEVLQVTCETNDWISVPAGTRHWFDMGEKPYFCAIRFFNNPNGWVANFTNDPIAERFSKLRD", - "output": "acireductone dioxygenase (Ni2+-requiring) activity ; acireductone dioxygenase activity ; iron ion binding ; nickel cation binding ; L-methionine salvage from methylthioadenosine ; L-methionine salvage from S-adenosylmethionine" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MGKTPEDFERHTMRSLIFVLALSVFTCSGFPVYDYELPVTEEALNASIARINSQTWGPNLYGVVRSHVRHVDMWNSNDYRLELQLSIRETECTKASGRDPFTCGFKVGPFVPTAVCKSVVEVSSEQIVNVIVRCHQSTFSSESMSSEEMTYMLMTDPRKRGSSRSEAFSSRGRGHSNGDWRKPDYTSPGKVE", - "output": "extracellular region ; bone remodeling" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MTATAPVKTEYEAVIGLETHVQLGTATKIFSNASTEFGADPNTHIDPVVLGLPGTLPVLNQKVLEYAVKAGLALNCQIAPYSKFDRKQYFYPDLPKNYQISQYDLPIAEHGWIEIEVAEKGKEPYTKKIGVTRLHMEEDAGKLVHAGSDRLAGSTHSLVDYNRAGVALAEIVSEPDLRTGKEAAEYAQELRRIMRYLGVSDGNMAEGSLRCDVNISIRPKGTEKFGTKVEIKYMNSFNAIQRAIEFEIERQIRCLETGEPIVQETRLWDEGKQVTKSMRSKEGSSDYRYFPEPDLGPIEVSETQRETWRSELPELPAQKRHRYAEQYGLSAYDARVLTDEKSTADYYEATVAAGADAKQAANWLMGDIAAYVNANKLLVSDLPLQPQDLAELVNLIEAGTISGKIAKEILPELLEKGGSPKAIVEAKGLTQISDPAQIEALVDELLAAHPTELEQFRAGKTKLQGFFVGQLMKKTGGRVDPKLSNQILNQKLKG", - "output": "asparaginyl-tRNA synthase (glutamine-hydrolyzing) activity ; ATP binding ; glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity ; translation" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MAEGKGFLRLEWARDHMPVIAEIRKRFLDEKPFKGINIAMALHVEAKTGIFSLLLKEGGANVRMASCNPLSSDDSVVESLKTDYGMPVFARKGETQEEYYENLQRTLEKPPDIIIDDGGDLTKLVHTERKDLSKNIMGGNEETTTGVVRLKAMEKAGVLLFPMFDVNDANMKHLFDNRYGTGQSTLDGIMNSTNLLIAGRNVVVAGYGYCGRGIAMRLKGMGANVIVTEIDPIKANEAIMDGFQVRRMNDAIRYADMVITATGMKDVVKYEDALVAKKNIVLANAGHFDNEVAVKEIEKHSLEKREVREFVKRYRLENGNTVDVIADGRLVNLAAGQGHPVEIMDLSFALQALTAEYLVKNHQNLEKKVYPVPPEIDRYVAEIRLKQFGGELDTLTEDQIKYLNSWDEGT", - "output": "cytoplasm ; adenosylhomocysteinase activity ; one-carbon metabolic process" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MARKSLMVKAERQPKFKVRKYTRCQICGRVHAVLRKYKICRICFRELAHEGKIPGVKKASW", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; zinc ion binding ; translation" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MAGNAVDNANHLTYFFGNITREEAEDYLVQGGMTDGLYLLRQSRNYLGGFALSVAHNRKAHHYTIERELNGTYAISGGRAHASPADLCHYHSQEPEGLVCLLKKPFNRPPGVQPKTGPFEDLKENLIREYVKQTWNLQGQALEQAIISQKPQLEKLIATTAHEKMPWFHGNISRDESEQTVLIGSKTNGKFLIRARDNNGSFALCLLHEGKVLHYRIDRDKTGKLSIPEGKKFDTLWQLVEHYSYKPDGLLRVLTVPCQKIGVQMGHPGSSNAHPVTWSPGGIISRIKSYSFPKPGHKKPPPPQGSRPESTVSFNPYEPTGGAWGPDRGLQREALPMDTEVYESPYADPEEIRPKEVYLDRKLLTLEDNELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAAWGPLNKYLQQNRHIKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYFKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPPGCPREMYDLMFLCWTYDVENRPGFAAVELRLRNYYYDVVN", - "output": "B cell receptor complex ; cytoplasm ; cytosol ; early phagosome ; extrinsic component of cytoplasmic side of plasma membrane ; nucleus ; protein-containing complex ; T cell receptor complex ; ATP binding ; integrin binding ; interleukin-15 receptor binding ; molecular function activator activity ; non-membrane spanning protein tyrosine kinase activity ; phosphatase binding ; phospholipase binding ; phosphotyrosine residue binding ; protein domain specific binding ; protein kinase activity ; protein kinase binding ; protein serine/threonine kinase activity ; protein tyrosine kinase activity ; scaffold protein binding ; SH2 domain binding ; signaling receptor binding ; Toll-like receptor binding ; ubiquitin protein ligase binding ; adaptive immune response ; angiogenesis ; B cell differentiation ; B cell receptor signaling pathway ; beta selection ; blood vessel morphogenesis ; calcium-mediated signaling ; cell activation ; cell differentiation ; cell surface receptor signaling pathway ; cellular response to lectin ; cellular response to lipid ; cellular response to low-density lipoprotein particle stimulus ; cellular response to molecule of fungal origin ; collagen-activated tyrosine kinase receptor signaling pathway ; defense response to bacterium ; enzyme-linked receptor protein signaling pathway ; establishment of localization in cell ; gamma-delta T cell differentiation ; innate immune response ; integrin-mediated signaling pathway ; interleukin-3-mediated signaling pathway ; intracellular signal transduction ; leukocyte activation involved in immune response ; leukocyte cell-cell adhesion ; leukotriene biosynthetic process ; lymph vessel development ; macrophage activation involved in immune response ; mast cell degranulation ; neutrophil activation involved in immune response ; neutrophil chemotaxis ; peptidyl-serine phosphorylation ; peptidyl-tyrosine phosphorylation ; positive regulation of alpha-beta T cell differentiation ; positive regulation of alpha-beta T cell proliferation ; positive regulation of B cell differentiation ; positive regulation of bone resorption ; positive regulation of calcium-mediated signaling ; positive regulation of cell adhesion mediated by integrin ; positive regulation of cold-induced thermogenesis ; positive regulation of cysteine-type endopeptidase activity involved in apoptotic process ; positive regulation of cytokine production ; positive regulation of gamma-delta T cell differentiation ; positive regulation of granulocyte macrophage colony-stimulating factor production ; positive regulation of interleukin-10 production ; positive regulation of interleukin-12 production ; positive regulation of interleukin-3 production ; positive regulation of interleukin-4 production ; positive regulation of interleukin-6 production ; positive regulation of interleukin-8 production ; positive regulation of JUN kinase activity ; positive regulation of killing of cells of another organism ; positive regulation of MAPK cascade ; positive regulation of mast cell cytokine production ; positive regulation of mast cell degranulation ; positive regulation of monocyte chemotactic protein-1 production ; positive regulation of peptidyl-tyrosine autophosphorylation ; positive regulation of peptidyl-tyrosine phosphorylation ; positive regulation of protein-containing complex assembly ; positive regulation of receptor internalization ; positive regulation of superoxide anion generation ; positive regulation of tumor necrosis factor production ; positive regulation of type I interferon production ; protein autophosphorylation ; protein import into nucleus ; protein phosphorylation ; receptor internalization ; regulation of arachidonic acid secretion ; regulation of DNA-binding transcription factor activity ; regulation of ERK1 and ERK2 cascade ; regulation of immune response ; regulation of neutrophil degranulation ; regulation of phagocytosis ; regulation of platelet activation ; regulation of platelet aggregation ; regulation of superoxide anion generation ; regulation of tumor necrosis factor-mediated signaling pathway ; serotonin secretion ; serotonin secretion by platelet ; stimulatory C-type lectin receptor signaling pathway ; transmembrane receptor protein tyrosine kinase signaling pathway" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MTASELVAGDLAGGRAPGALPLDTTWHRPGWTIGELEAAKAGRTISVVLPALNEEATIESVIDSISPLVDGLVDELIVLDSGSTDDTEIRAIASGARVVSREQALPEVPVRPGKGEALWRSLAATSGDIVVFIDSDLINPHPLFVPWLVGPLLTGEGIQLVKSFYRRPLQVSDVTSGVCATGGGRVTELVARPLLAALRPELGCVLQPLSGEYAASRELLTSLPFAPGYGVEIGLLIDTFDRLGLDAIAQVNLGVRAHRNRPLDELGAMSRQVIATLLSRCGIPDSGVGLTQFLPGGPDDSDYTRHTWPVSLVDRPPMKVMRPR", - "output": "hexosyltransferase activity ; magnesium ion binding ; protein homodimerization activity ; UDP-glucose metabolic process" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MSFTPGKQSSSRASSGNRSGNGILKWADQSDQSRNVQTRGRRAQPKQTATSQQPSAGNVVPYYSWFSGITQFQKGKEFEFAEGQGVPIAPGVPATEAKGYWYRHNRRSFKTADGNQRQLLPRWYFYYLGTGPHAKDQYGTDIDGVFWVASNQADVNTPADILDRDPSSDEAIPTRFPPGTVLPQGYYIEGSGRSAPNSRSTSRTSSRASSAGSRSRANSGNRTPTSGVTPDMADQIASLVLAKLGKDATKPQQVTKQTAKEIRQKILNKPRQKRSPNKQCTVQQCFGKRGPNQNFGGGEMLKLGTSDPQFPILAELAPTAGAFFFGSRLELAKVQNLSGNLDEPQKDVYELRYNGAIRFDSTLSGFETIMKVLNENLNAYQQQDGMMNMSPKPQRQRGQKNGQGENDNISVAAPKSRVQQNKSRELTAEDISLLKKMDEPFTEDTSEI", - "output": "host cell endoplasmic reticulum-Golgi intermediate compartment ; host cell Golgi apparatus ; ribonucleoprotein complex ; viral nucleocapsid ; RNA binding" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MACARPLISVYSEKGESSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVQLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMMNTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLRVKKLEAAATALATKSEKVVPEKGTADKKPAVGKKGKKVDAKKQKPAGKKVVAKKPAEKKPTTEEKKPAA", - "output": "A band ; cytoplasm ; cytosol ; cytosolic large ribosomal subunit ; cytosolic ribosome ; large ribosomal subunit ; nucleus ; postsynapse ; postsynaptic density ; presynapse ; ribonucleoprotein complex ; ribosome ; rough endoplasmic reticulum ; 5S rRNA binding ; RNA binding ; structural constituent of ribosome ; cytoplasmic translation ; positive regulation of axon extension ; positive regulation of axonogenesis ; translation at postsynapse ; translation at presynapse" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MSDRLTLLRPDDWHIHLRDGAVLQHTVGDVARTFARAIIMPNLVPPVRNALEAGGYRERILAARPAGSRFEPLMVLYLTDRTSPEDIRAAKASGFVYAAKLYPAGATTNSDSGVTSIDNIFPAIEALAETGMPLLVHGEVTRSEIDVFDREKRFIDEHMRRLVERFPTLKVVFEHITTADAAQFVTEAPANVGATITAQHLLYNRNHMLVGGIRPHFYCLPILKRNTHQVALLDAATSGNPKFFLGTDSAPHAKHAKEAACGCAGCYTAYAAIELYAEAFEQRNALDKLEGFASKHGPDFYGLPRNTDTITLVRDEWTAPDSLPFGDNTVIPLRAGEKLRWRLLEDNA", - "output": "dihydroorotase activity ; zinc ion binding ; 'de novo' UMP biosynthetic process ; pyrimidine nucleobase biosynthetic process" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MPTVLIVGKSNVGKSTLFNKLIGYKKSIVDDKEGVTRDAVSGRVSYYSKTFNIVDTGGIFENPEDDIINKSKDLTLKMLNEADLILFVIDAKNGITSEDYYLADIIRKSNNDVILVSNKSESERRVQNNLPDIYKLGFGDPIFVSAEQGKNIDTLIERIVNVLESKGLSLEENLKEESQSIIRVSFIGRPNAGKSTLFNSILNKERVLVTPIPGTTRDSVDELVTINGRKYLFVDTAGLRRKSKVDYKSLDMYSNVRSIKSIENSDVVVILIDAIEGITHQDQRIAGIAENRGKATIVAFNKIDLIKNFKYKKEEFIDQFNEKLYFINYSPLIFLSAINKKGIDNLINAIDEAYKSLHYRVQTSAVNSAIQRMMAFTPPPKGLKILYGTQVDIRPPTFLFFTNGKKVPEFYQNHIRKTIRENIYPFVGAPIFLKFKSRH", - "output": "GTP binding ; ribosome biogenesis" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MAQIRIHEVNTRIENEVEVSKFLQEEGVLYEKWNISKLPPHLNENYSLTDENKAEILAVFSKEIADVSVRRGYKAHDVISLSNSTPNLDELLINFQKEHHHTDDEVRFIVSGHGIFAIEGKDGTFFDVELEPGDLISVPENARHYFTLQDDRQVVAIRIFVTTEGWVPIY", - "output": "acireductone dioxygenase (Ni2+-requiring) activity ; acireductone dioxygenase activity ; iron ion binding ; nickel cation binding ; L-methionine salvage from methylthioadenosine ; L-methionine salvage from S-adenosylmethionine" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MEWETVIGLEIHAQLNTKSKIFSAASTQYGQKPNSQACAVDLGLPGVLPVLNVEVINKAIKFGVAINAHINQRSIFDRKNYFYPDLPKGYQISQMDRPIVGEGKIEITFDDQTKIVGITRAHLEEDAGKSMHDMFDDDTAIDFNRAGIPLLEIVSEPDMRSAKEAVIYAKKIHALVQYIDICDGNMQEGSFRFDANVSIRPKGEKELGTRTELKNINSFKFLERAINLEVERQQDILEESGSIVQETRLYDSVKHETRSMRSKEETNNYRYFPDPDLLSVEISNELLEKIRQTLPELPTQKKARFVSELGLSDYDADVLTLQKPLADYFETMLEHHASNAKLCANWIMGELSASLNKHKIDIQNSPITAQALSLLISRISDDTISGKAAKDVFKAMWNSEGNADEIIQAKGLKQMIGMGEIEAIVEQVIANNARQAVQFKLGNDKIFGFFVGQIMKLTAGKANPKQVNELLRNKLF", - "output": "asparaginyl-tRNA synthase (glutamine-hydrolyzing) activity ; ATP binding ; glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity ; translation" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MTYSTESLAQSDIWPATADVSTLRRKLLDLLCQLAYKEGDFVLSSGQPSSYYINGKQVTLHPQGALAIGRILLSLLPSDTQAVAGLTLGADPIVTAVSVVSAYENRPIPALIIRKEAKGHGTKAYIEGPNLPEGAKVVVLEDVVTTGQSAMKAVDRLRAAGYVVDEVISLVDRQQGGAEFYQSVGLKFEAVFTIMDLQQRYQELGN", - "output": "magnesium ion binding ; orotate phosphoribosyltransferase activity ; 'de novo' UMP biosynthetic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MSGGLLKALRSDSYVELSEYRDQHFRGDNEEQEKLLKKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRYINGTRLDDRIIRTDWDAGFKEGRQYGRGRSGGQVRDEYREDYDAGRGGYGKLAQKQ", - "output": "cytoplasm ; mRNA cap binding complex ; nuclear cap binding complex ; nucleoplasm ; nucleus ; RNA cap binding complex ; DNA binding ; mRNA binding ; RNA 7-methylguanosine cap binding ; RNA cap binding ; snRNA binding ; alternative mRNA splicing, via spliceosome ; cap-dependent translational initiation ; histone mRNA metabolic process ; miRNA-mediated gene silencing ; mRNA 3'-end processing ; mRNA cis splicing, via spliceosome ; mRNA export from nucleus ; mRNA splicing, via spliceosome ; mRNA transcription by RNA polymerase II ; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay ; positive regulation of RNA export from nucleus ; positive regulation of transcription elongation by RNA polymerase II ; primary miRNA processing ; regulation of translational initiation ; RNA splicing ; snRNA export from nucleus" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MAFENLKISRHISSSTKNLLKAKKIMAALASNPQMLTRQAHGNKKEQLWRKESLNLEKKCGFCVSVYSNEKLGRSHMEKEWRLKAFWSNIAQPTTLEMEPINNVEELDAVLSHARQLSQPIIIEWMASWCRKCIYLKPKLEKLAAEYNNRAKFYYVDVNKVPQTLVKRGNISKMPTIQLWKEDEMKEEVIGGHKGWLVIEEVRELINKFV", - "output": "chloroplast stroma" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MSGNNHPGDASAEIDVVLVTGLSGAGRGTAAKVLEDLGWYVADNLPPQLITWMVDFGLAAGSRITQLAVVMDVRSRGFTGDLDSVRRELATRNIIPRVVFMEASDDMLVRRYEQNRRSHPLQGEQTLAEGIAAERRMLAPVRATADLIIDTSALSVPGLRESIERAFGGDASATTSVTVESFGFKYGLPMDADIVMDVRFLPNPHWVDELRSLTGQHSAVRDYVLGQPGAAEFLRTYRRLLSLVVDGYRREGKRYMTVAIGCTGGKHRSVAIAEALMGLLQSDLQLSVRVLHRDLGRE", - "output": "ATP binding ; GTP binding" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MSDSTFSAKNLACVRGGRVVFAGLGFSLSAGGALVLLGPNGSGKSSLLRVLAGLLKPAHGLLAWNGEALAEDPEAHAARTHYLGHHDAVKPVLSVAENLRFWAHLHDPHAERAGRAVDAALSRFGLARLATIPGKMLSAGQKRRTNLARLLAAPSPLWLLDEPTTALDKASIKVLEDVLAEHRAAGGMVVLSTHADINMPGAQELHLDQFAVAEELP", - "output": "plasma membrane ; ABC-type heme transporter activity ; ATP binding ; cytochrome complex assembly" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MAISSTERRAKNVQIFVEKDAVETSFAKWAQPGHFSRTLAKGPKTTTWIWNLHADAHDFDSQTSSLEEVSRKIFSAHFGQLAVIFLWISGMHFHGAYFSNYSAWLSDPISIKQSSQVVWPIVGQEILNADVGGNFQGVQTTSGWFQMWRAEGITSEVELYWIAIGGLIMSALMLFAGWFHYHKAAPKLEWFQNAESMMNHHLAGLLGLGCLSWSGHQIHIALPINKLLDAGVAPQEIPLPHEFLINRELMAQLYPSFNKGLAPFFSGQWGEYSDFLTFKGGLNPVTGGLWLSDIAHHHLALSVLFIFAGHMYRTNWGIGHSMKEILEAHKGPFTGEGHKGLYEILTTSWHAQLAINLAMMGSLSIIVAHHMYAMPPYPYIATDYATQLSLFTHHMWIGGFCVVGGAAHGAIFMVRDYTPANNYNNLLDRVLRHRDAIISHLNWVCIFLGCHSFGLYIHNDTMRALGRPQDMFSDKAIQLQPIFAQWVQNIHLLAPGTTAPNALATTSYAFGGDVVEVGGKIAMMPIKLGTADFMVHHIHAFTIHVTVLILLKGVLYARSSKLIPDKANLGFRFPCDGPGRGGTCQSSSWDHVFLGLFWMYNSISVVIFHFSWKMQSDVWGTITPDGNISHITGGNFAQSSITINGWLRDFLWSQASQVIQSYGSASSAYGLIFLGAHFIWAFSLMFLFSGRGYWQELIESIVWAHNKLNFAPAIQPRALSITQGRAVGLAHYLLGGIGTTWSFFLARAISIT", - "output": "chloroplast thylakoid membrane ; photosystem I ; 4 iron, 4 sulfur cluster binding ; chlorophyll binding ; electron transfer activity ; magnesium ion binding ; photosynthesis" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MVHFTAEEKAVITSLWGKVNVEEAGGEALGRLLVVYPWTQRFFDNFGNLSSASAIMGNPKVKAHGKKVLTSLGDAIKNMDDLKGTFAHLSELHCDRLHVDPENFKLLGNELVIVLAKYFGKEFTPQVQAAWQKMVAGVAIALAHKYH", - "output": "hemoglobin complex ; heme binding ; metal ion binding ; oxygen binding ; oxygen carrier activity" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MTYTISIRVYQTTPKGFFRPVERTNWKYANGGTWDEVRGEYVLTMGGSGTSGSLRFVSSDTDESFVATFGVHNYKRWCDIVTNLTNEQTALVINQEYYGVPIRDQARENQLTSYNVANAKGRRFAIEYTVTEGDNLKANLIIG", - "output": "carbohydrate binding" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MKTLYLRNVPDDVVERLERLAELAKTSVSAVAVRELTEASRRADNPALLGDLPDIGIDTTELIGGIDAERAGR", - "output": "regulation of DNA-templated transcription" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MVKSQRNGKKGAKVLSRKEKRQSEKEEMDSLRQRIEEYNPEVDEASIKHFSDLPITQNTLRGLKECSFVSLTDIQKKSIPVALKGEDLMGTARTGSGKTLAFLIPVIEILLRNDITEYDGLAALIVSPTRELAVQIFEVLAKIGKYNSFSAGLVTGGKDVQYEKERISRMNILVGTPGRISQHLNESVGMETSNLQVLVLDEADRCLDMGFRKQIDNILNHLPRTRQTLLFSATHTDSVQDLARLSLTNPKRIGTSSDQDISAIPESLDQYYVKVPLNEKLDVLWSFIKSHLKSKILVFFSSSKQVQYAYETFRTLQPGIPLMKLYGRHKQTSRLETTVKFSQAQHACLFATDIVARGLDFPAIDWVIQVDCPEDVATYVHRVGRSARFGRQGKSLLMLLPTEEDGMLKRMKVHKIEPKMMNIKEKSKKSIRPQLQSLCFKDPVIKNLGQRAFIAYFRSVYIQKDKDIFKVDELPVEEYAASLGLPGAPKIKIKGGEINKEKKNQSRKLLQLSKADENGELKEDDDKPAKVRTKYDRIFDRKNQTILSEHYLNMTKSAHGGKDDDEDEDFMTVKRQDHELVDDELPDLLLPVSKRQAKKALSRKATLASKGNPTKLKFDDDGVPHAIYELEGEEDFEKAGDAKQQKMEFVQKEQEAMKITDLADREVERQKRQEKKRKRKEIERRIREEEWDDGSGMDGEDLPDLERDMEPTEAKPKRTSNWFDDDDDDNDGGDEKHGNGKPPVKKAKSDSKYVEFEEPETLEDLESLAATLIGN", - "output": "nucleolus ; ATP binding ; ATP hydrolysis activity ; RNA binding ; RNA helicase activity ; rRNA processing" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MSNPPQGSSLASPIQAAAVTGDKTTLLRLIASSPQVIDQEDQLGRTPLMYSVLGDRRSCAEALLKHGAKVNRPDRSGRTALHLAAQTGNHRLLKLLLSRKADCTHRDLCDITALHLSTRHQDTQCLVLLLKYTPPGQVDAQDQRKQTALHWSAYYNRPQHVRLLVRHGSNIGIPDTEGKIPLHWAAGHKDPEAALTVRCLFEAAPTESLLNWQDYEGRTPLHLAVGDGNQEVVRLLTSYRGCNVAPYDNLFRTPLHWAALLGHTPIAHLLLERNNSPNIPSDSQGATPLHYAAQGNCPDTVRVLLSHPSVRDEADLEGRTALMWAAGKGSDEVVRTMLELNPKLEVNRTDKYGGTALHAASLSGQITTVRILLENRAQADAVDVMKHTPLFRACEMGHREVIATLIKGGAKVHLVDKDGRSPLHWAALGGNANVCQILIENNINPDAQDYEGRTPLQCAAYGGYIGCMEVLMENKADPNIQDKNGRTALHWSCNNGYLDAVKLLLGYNAFPNQMENTEERYTPLDYALLGGHQEVIQFMLEHGALSIAAIQDIAAFKIQAVYKGHKVRRAFQERKNLLMKHEQLRKGAAAKKREGENRQKVKVGQTKGKQKDADSMERQNKSNEQIIKNEVVHEWQGEASGNAEDRKGKHREENLETNHLQHSKHMAKNQRITAQIQSSPSEHEHTNSIQIRTSPSGTSNTQSSPLGNEIPKNMYWDDNPSQKHTQTRRTSRHQMESPDVVVHRIEDLIQKESRRKSHREERKGSHRQRQSSDYRLHTSEKEASDSAIHREEEGKKKETKKGRRTVAVTPKIEACCKGGCGKLSQSEKVSLGIGIQGRVDCITSPEPCETPSRVCRERKTISAKTGQRPLTETHKPPGKACRSSSALKSSLPSHIKQTAIDSKCLDSTLSYIGFGEAIKPLFPMGILREGSFFSKWQNIDIELIPVQARLQLVEREKARKQLFQRKNHAATVIQKAWRTYWVRKSSCKTRHSRSQNNPPAMV", - "output": "cytoplasm ; cytoskeleton ; calmodulin binding ; Wnt signaling pathway" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MDLSNLTLTKIQELVLTRKCKIYDILLAYKNNYELNKDINGYIEFFDDSLEIAKRYDDCLKNCELEDLPLIGMLIAVKDNISIQDKSLTCASEILKGYISPYDATVIKRLKNKGAILIGRTNMDEFAMGSTCEFSYYGATLNPLNREYVIGGSSGGSAAVVAAFQAPFSLGSDTGGSVRLPASFSGILGFKPSYGGLSRYGLASYASSFDQIGFFSHSIEDIALILKHTCGSDKMDSTSVDIFDDFYPLKIESLQGKNLAVIKELSEDLMDKNVANSFAKFKLDLLSKGINIKEVSIEEINFILSIYYIISPVEASSNLARYTGLCYGKRISEGLSLNDFYFKHRSNFLSEEVKRRIVLGNYLLSERYDSKYYAKACEILQNLIIPKFNKLFESCDFIITPTSFVKPFRLGLDFDDPVKMYYSDICTVIANLIGAPAISLPYSKDEEGLSIGMQIIGRSKKDFELLSFSKNVIRELGLNGI", - "output": "glutamyl-tRNA(Gln) amidotransferase complex ; ATP binding ; glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity ; translation" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MLKKCVWLAVALCLCLWQFTMGTALAAELTPEVLTVPLNSEGKTITLTEKQYLEGKRLFQYACASCHVGGITKTNPSLDLRTETLALATPPRDNIEGLVDYMKNPTTYDGEQEIAEVHPSLRSADIFPKMRNLTEKDLVAIAGHILVEPKILGDKWGGGKVYY", - "output": "photosystem II ; plasma membrane-derived thylakoid membrane ; electron transfer activity ; heme binding ; iron ion binding ; cytochrome c-heme linkage ; photosynthesis, light reaction ; respiratory electron transport chain" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MATLMDKLITSVAPPSTKPNNKVTVVGVGQVGMACAISILEKGLCDELALVDVVEDKLKGEMMDLQHGSLFLNTHKIVADKDYSVTANSKVVVVTAGVRQQEGESRLDLVQRNVNVFKFIIPQVVKHSPDCIILVVSNPVDILTYVTWKLSGLPKHRVIGSGCNLDSARFRFLMAEKLGVHPTSCHGWILGEHGDSSVAVWSGVNVAGVSLQEMNPAMGSDQDPESWKQVHKQVVDSAYEVIKLKGYTNWAIGMSVADLLETILKNLCRVHPVSTMVKGMYGIENEVFLSLPCVLGSAGLTSVINQKLKDNEVAQLQNSATTLWNVQKDIKDLKS", - "output": "cytoplasm ; L-lactate dehydrogenase activity ; carboxylic acid metabolic process" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MFITRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGVSSILGAINFITTIINMKPPALTQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPALLWALGFIFLFTIGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFTGYTLNDLWAKIHFSIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNIISSIGSFISLTAVILMVFIIWEAFASKREVATVELTTTNIEWLYGCPPPYHTFEQPVFVKV", - "output": "mitochondrial inner membrane ; respiratory chain complex IV ; cytochrome-c oxidase activity ; heme binding ; metal ion binding ; oxidative phosphorylation" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MIQTQSMLDVADNSGARRVMCIKVLGGSHRRYAGIGDIIKVTVKEAIPRGKVKKGQVMTAVVVRTRHGVRRADGSIIRFDGNAAVLLNNKQEPIGTRIFGPVTRELRTEKFMKIVSLAPEVL", - "output": "large ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQDFFPLTVNYQERTYAAGRIPGSFFRREGRPSEGETLIARLIDRPIRPLFPEGFVNEVQVIATVVSVNPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQYVLNPTQDELKESKLDLVVAGTEAAVLMVESEAELLSEDQMLGAVVFGHEQQQVVIQNINELVKEAGKPRWDWQPEPVNEALNARVAALAEARLSDAYRITDKQERYAQVDVIKSETIATLLAEDETLDENELGEILHAIEKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTARDAQVLDELMGERTDTFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPDMDKFPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEGDNYVVLSDILGDEDHLGDMDFKVAGSRDGISALQMDIKIEGITKEIMQVALNQAKGARLHILGVMEQAINAPRGDISEFAPRIHTIKINPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAATDGEKAKHAIRRIEEITAEIEVGRVYNGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVEKVTDYLQMGQEVPVKVLEVDRQGRIRLSIKEATEQSQPAAAPEAPAAEQGE", - "output": "cytoplasm ; magnesium ion binding ; polyribonucleotide nucleotidyltransferase activity ; RNA binding ; mRNA catabolic process ; RNA processing" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MALVEGNNGVSGGAVSFSEEQEALVLKSWAIMKKDSANIGLRFFLKIFEVAPSASQMFSFLRNSDVPLEKNPKLKTHAMSVFVMTCEAAAQLRKAGKVTVRDTTLKRLGATHFKYGVGDAHFEVTRFALLETIKEAVPVDMWSPAMKSAWSEAYNQLVAAIKQEMKPAE", - "output": "heme binding ; metal ion binding ; oxygen binding" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MAQVINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKAYDVKDTAVTTKAYANNGTTLDVSGLDDAAIKAATGGTNGTASVTGGAVKFDADNNKYFVTIGGFTGADAAKNGDYEVNVATDGTVTLAAGATKTTMPAGATTKTEVQELKDTPAVVSADAKNALIAGGVDATDANGAELVKMSYTDKNGKTIEGGYALKAGDKYYAADYDEATGAIKAKTTSYTAADGTTKTAANQLGGVDGKTEVVTIDGKTYNASKAAGHDFKAQPELAEAAAKTTENPLQKIDAALAQVDALRSDLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQANQVPQNVLSLLR", - "output": "bacterial-type flagellum ; extracellular region ; structural molecule activity" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MVQHLTAEEIIQYISDAKKSTPIKVYLNGNFEGITYPESFKVFGSEQSKVIFCEADDWKPFYEAYGSQFEDIEIEMDRRNSAIPLKDLTNTNARIEPGAFIREQAIIEDGAVVMMGATINIGAVVGEGTMIDMNATLGGRATTGKNVHVGAGAVLAGVIEPPSASPVIIEDDVLIGANAVILEGVRVGKGAIVAAGAIVTQDVPAGAVVAGTPAKVIKQASEVQDTKKEIVAALRKLND", - "output": "tetrahydrodipicolinate N-acetyltransferase activity ; diaminopimelate biosynthetic process ; lysine biosynthetic process via diaminopimelate" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MILKSFILGNLVSLCMKIINSVVVVGLYYGFLTTFSMGPSYLFLLRARVIEEGEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHKHFFDYGSTTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNIYMFRCNNKMLFVTSSFVGWLIGHILFMKWVGLILVWIQQNNSLRSNKYIRSNKYLVSELRNSMARIFSILLFITCVYSLGRIPSPIFTKKLKETSETEEREEETDVEIETTPETKGTKQEQEGSTEEDPSSSLFSEEKENPDKIDETEEIRVNGKEKTKDEFHFHFKETCYKNRPVYETFYLDGNQENSKLEIFLDKKDKDLVWFEKPRVTILFDYKRWNRPFRYIKNDQFKNAVRKEMSQYFFSTCRSDGKERISFTYPPSLSTFLEMIQRKMSLFTTEKLSSDELYNHWNYNNEQKKKNLSNEFINRVEVLDKGFRVLNILEKKTRLCNDETKKEYLPKIYDPFLSGLYRGKVNFFFSPSIINEISIKNYIEMLWINKIYLILLISNYQEFEPKMEDRIRILKFLFDAIIVDSKNKKIVKKSTEIKKEISKQIPRWSYKLIDDLEQQEGENEENAAEDHEIRSRKAKRVVIFTDNQENPDSNTYNNSKTKDTTNFDQTGEVALIRYSQQSDFRRDIIKGSMRTQRRKIAILKLFQANLHSPLFLDRIDKFLFFAFDTSELMKIMFINWMCKNAEFTISDSTSTYTEEKTKESDKKEKEEIKNRREEDKREEKVRIEIAETWDSIIFAQAIRGCVLVIQSILRKYILLPSLIIAKNIIRMLLFQIPEWSEDLKDWNREMHVKCTYNGVQLSETEFPKNWLTDGIQIKILFPFRLQPWHRSKFKFLSKDPIKKKRQKNDFCFLTVWGMEAELPFGSPRKELSLFEPIFKKLKKKIRKLKKNGFLTLTILKEKRKLFLHLPKETKNWFIKGILFLKEIINKFSKSKRNPILLFGFREVYELNETKNEKNSPINNRTIHKFSTSIRSMDWINYSLTEKKMKDLNARTKTIRNQIEKITKEKKKRFLISERNISPNKLSYNAKRLKLKSSKNILQILKRNNAQLVRKSYFFIKILIEKIYIDILLAIINIPRINVQFFLESPRKMINKYIYMYNKKENHKRIEKTNQNTLIHFISIIKKALNYSNFNKNSKIFYNITSLSQAYVFYKLSQVQVINLYKLRSVFQYHGASLFLKNEIKDYFGVQGRFQFKLKDTNFRNSVMNEWKNWVRSTYQYKYDLSQIRWSSLISQKWRNRMNQQHMIQNKDLNKWNLYDKDQLIHYEKQNNFEVDSLSNQKDNFKKYYRYNILLYKSINYEDKKDSSIYELPFQLNNKQELFYNYKIDKRKLFDMSGGIPVNKHLTEDDIIDTEKSSHRKYLDWRILHFGLRKKVDIESWIDTGTKQKKNLFDWMGMNEEILDRPTSNLEFWFFPKFVILCNAYKIKSWVIPIKLLFLNFNGTKNVSENKKINKKKNNDPFISISSNETKSIQLKNQNHEEKESEDQVDLESVLVNQEKDVEEDYVRSDRKERRKKKQYKSNTEAELDFLLKRYLCFQLRWDDSLNQKIINNIKIYCLLLRLTNPREIIISSIQRGELSLDILMIQKDLTLTELMKKGILIIESTRLSVKNDGKFIMYQTINILLVHKRKQQINQRYRKKNYIDKKNFNESIVINQSLTRNKDKNNYDLPVPENLLSSKHRRELRILISFNSKNGNDINTEIINNNNIKNHAHIIDKRKHFDRDKNKLIKLKLFLWPNYRLEDLACINRYWFDTNNASRFSMIRIHICPRLKSR", - "output": "chloroplast inner membrane ; protein transport" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MKPDAHQVKQFLLNLQDTICQQLTAVDGAEFVEDSWQREAGGGGRSRVLRNGGVFEQAGVNFSHVHGEAMPASATAHRPELAGRSFEAMGVSLVVHPHNPYVPTSHANVRFFIAEKPGAEPVWWFGGGFDLTPFYGFEEDAIHWHRTARDLCLPFGEDVYPRYKKWCDDYFYLKHRNEQRGIGGLFFDDLNTPDFDHCFAFMQAVGKGYTDAYLPIVERRKAMAYGERERNFQLYRRGRYVEFNLVWDRGTLFGLQTGGRTESILMSMPPLVRWEYDYQPKDGSPEAALSEFIKVRDWV", - "output": "cytoplasm ; coproporphyrinogen oxidase activity ; metal ion binding ; protein homodimerization activity ; protoporphyrinogen IX biosynthetic process" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MKDQLLVPLRRRPWTCRKCLQRLQLLPQHQTRRSFETAASPFPRQLDSLPADYSRTKTVDDDTLRRVFDSQQFWREFSQQRSAQPKPTGLVQNQYLTSPDGFRTFANVSLQKCQAIVSKVLAASTLEEYRTMARDLDRLSDLLCRVIDLSDFIRVIHPDPQVQEAATQAYALMFEYMNVLNTTTGLNDQLKKAAANPEVTSQWSDEEKIVAQILIKDFSNSAIHMPPHERQRFVNLSNDISQLGSSFVNGAEPAKSHVSVATNNLRGLDPILVQQIKRWNRTAAVPTTGMIPRLALRSVHDENVRREVYLASRTSSKRQLHRLEELLLKRAELAKLSGYESFAHMTLSDKMAKSPEAVSNFLTALVDSNRKLVREELSQLQAMKGAPLQPWDHAYYVHQRVMQYSQARRSRELSAVPEFFSLGTVMQGLSRLFDRLYGVRLVPQEPAPGETWNPDVRRLDVVDESGRHIAVIYCDLFSRPNKHPNPAHFTLRCSREISTEEVAECASLDQSSHPNDGMATAVDPVTKTLRQLPTIALVCDFSEPGTNGGGRPSLLSEHSVRTLFHEMGHAVHSILGQTRLQSISGTRCATDFAELPSVLMEHFATAPSVLALYARHWRTDEPLSEGMIRSMERDRTAHGSIYGAVENEAQILMALVDQAYHSRPADGGRIDSTALYQQVSQQHSSLPEPADVTPPTSWQGFFGHLYGYGATYYSYIFDRAIANKLWVDVFGAGRQAVDRAAGERYKNEVLRWGGGRSGWECVAGALGSANESNADGRLVEGGDEAMREVGRWGLGRDGVSG", - "output": "mitochondrial matrix ; metal ion binding ; metalloendopeptidase activity ; proteolysis" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MRTPCSQHRRDRPSAIGSQLPDADTLDTRQPPLQEIPISSFADKTFTAPAQIRNFCIIAHIDHGKSTLADRMLQLTGVVDERSMRAQYLDRMDIERERGITIKAQNVRLPWRVDKTDYVLHLIDTPGHVDFTYEVSRALEACEGAVLLVDAAQGIEAQTLANLYLALDRDLHIIPVLNKIDLPAADPDRYAAEMAHIIGCEPAEVLRVSGKTGEGVSDLLDEVVRQVPPPQGDAEAPTRAMIFDSVYDIYRGVVTYVRVVDGKISPRERIMMMSTGATHELLEVGIVSPEPKPCEGLGVGEVGYLITGVKDVRQSKVGDTVTSLSRARGAAAEALTGYREPKPMVYSGLYPVDGSDYPNLRDALDKLQLNDAALTYEPETSVALGFGFRCGFLGLLHMEITRERLEREFGLDLISTSPNVVYRVHKDDGTEIRVTNPSDWPEGKIRTVYEPVVKTTIIAPSEFIGTIMELCQSRRGELGGMDYLSPERVELRYTMPLGEIIFDFFDALKSRTRGYASLDYEEAGEQEAALVKVDILLQGEAVDAFSAIVHKDTAYAYGNKMTTKLKELIPRQQFEVPVQAAIGSKIIARENIRAIRKDVLSKCYGGDITRKRKLLEKQKEGKKRMKTIGRVEVPQEAFVAALSTDAAGDKGKK", - "output": "cytosol ; peptidoglycan-based cell wall ; plasma membrane ; GTP binding ; GTPase activity ; ribosome binding ; translation elongation factor activity ; positive regulation of translation" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MSKTKDQRTAKTLEKTWDTLNHLLFISSCLYKLNLKSIAQITLSILAMIISTSLIIAAIIFIASANNKVTLTTAIIQDATSQIKNTTPTYLTQNPQLGISFFNLSGTTSQTTAILALTTPSVESILQSTTVKTKNTTTTQIQPSKPTTKQRQNKPPNKPNNDFHFEVFNFVPCSICSNNPTCWAICKRIPSKKPGKKTTTKPTKKPTIKTTKKDHKPQTTKPKEAPSTKPTEKPTINITKPNIRTTLLTNSTTGNLEHTSQEETLHSTSSEGNTSPSQVYTTSEYLSQPTSPSNITNQ", - "output": "extracellular region ; host cell plasma membrane ; membrane ; virion membrane ; mitigation of host antiviral defense response ; viral entry into host cell ; virion attachment to host cell" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MMGRDYALYFFAALGSFLVVYIVLPIVTIFAKQALDFEMLVKTVHDPLVLEALRNSLLTATATALISLFFGVPLGYILARKDFRGKNFVQAIIDVPVVIPHSVVGIMLLVTFSNAILDSYKGIIAAMLFVSAPFAINSARDGFLAVDEKLEHVARTLGASRIRTFFSISLPMALPSIASGGIMAWARSMSEVGAILIVAYYPKTAQILVMEYFNNYGLRASRPISVMLMLISLSIFVFLRWLIGRVRE", - "output": "plasma membrane ; transmembrane transport" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MEKFEGYSEKLKFPRQYFVYPLLFQEYIYVFAHDYGLNGSELVEIIGSNNKKFSSLLVKRLMIRMYQQNFWINLVNHPNQDRLLDYNNFFYSEFYSQILSEGFAIVVEIPFSLREQSCPEEKEIPKFQNLRSIHSIFPFLEDKFLHLHYLAHIEIPYPIHLDILLQLLQYRIQDVPSLHLLRFFLNYYSNWNSFITSMKSIFILKKENKRLFRFLYNSYVSEYEFFLLFLRKQSSCLRLTSSGTFLERIIFSRKMEHFGLMYPAFFRKTIWFVMDPLMHYVRYQGKAILASKGTLLLKKKWKCYLVRLWQYSFSFWTQPQRIHLNQLENSCFDFLGYFSSVPINSLLVRNQMLENSFLIDTQMKKFDTKVPVTPLIGSLAKAQFCTGSGHPISKPIWTDLSDWDILDRFGRICRNLFHYYSGSSKKKTLYRLKYILRLSCARTLARKHKSTVRAFMQWLGSVFLEEFFTEEEQVFSLMFAKTTYFSFRGSHSERIWYLDILRINDLVNPLN", - "output": "chloroplast ; plastid ; RNA binding ; mRNA processing ; RNA splicing ; tRNA processing" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MPIITQILARQILDSRGNPTVEVDVYTESSFGRAAVPSGASTGVHEAVELRDGDAAVYLGKGVLKAVENVNTVINDALTGMLVTEQEEIDQALLDLDGTPNKSKLGANALLGVSMACAKAGAEYSGLPLYRYIGGTMASTLPVPMMNVLNGGAHADNTVDFQEFMIMPAGFDTFSDALRCGAEIFHALKALLKSKGLSTAVGDEGGFAPNLSSNEEAIELVIEAIGKAGYKVGSPTDKGGLGDAQVMIALDPASSEFYDSAKKRYVFKKSSKRELTSLEMAEYWEKWASDYPIISIEDGMAEDDWEGWKVLTEKIGSRVQLVGDDLFVTNSKRLAEGIERGVANSILVKVNQIGTLTETLDAIDLAKRNGYTSVISHRSGETEDSTIAQIAVATNAGQIKTGSLSRSDRMAKYNELLRIEEELGDQARYPGRKAFRV", - "output": "cell surface ; extracellular region ; phosphopyruvate hydratase complex ; magnesium ion binding ; phosphopyruvate hydratase activity ; glycolytic process" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MSEILNLKDLKVYYPIRSGFFNRVTDNVLAVDGVDLTIHEGETVGLVGESGSGKSTIGKTIVGLEQMTSGQLIYKGQDVSKKKIRNQLKYNKDVQMIFQDAFSSLNPRKTIYDIIAEPIRNFEKIDANTENKRIHELLDIVGLPKQALEQYPFQFSGGQQQRIGIARAVATNPKLIVADEPVSALDLSVQAQVLNFMKLIQKDLGIAFLFISHDLGVVRHMTDNIAVMHNGRIVEKGTRRDIFDEPQHIYTKRLLSAIPSIDVTRRAENRKNRLKVEQDFEDKKANFYDKDGHALPLKKLSESHWAALPKGGENVESNY", - "output": "plasma membrane ; ATP binding ; ATP hydrolysis activity ; transmembrane transporter activity ; peptide transport ; protein transport" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MSWLEKILEKSNIVSSRKASIPEGVWTKCTSCEQVLYYAELERNLEVCPKCDHHMRMKARRRLETFLDQGERVELGEELEPQDKLKFKDSKRYKERLAAAQKASGEKDALVVMKGAVLGVPVVACAFEFSFMGGSMGSVVGARFVRAVEAAIEHNCGLICFSASGGARMQEALMSLMQMAKTSAALERLSDKGLPFISVMTDPTMGGVSASLAMLGDINIGEPKALIGFAGRRVIEQTVREELPEGFQRSEFLLEHGAIDMIVDRRDMRQRVASLLAKMTGQASPLVVSVNDAPNEVPYAVPEANKKG", - "output": "acetyl-CoA carboxylase complex ; acetyl-CoA carboxylase activity ; ATP binding ; carboxyl- or carbamoyltransferase activity ; zinc ion binding ; fatty acid biosynthetic process ; malonyl-CoA biosynthetic process" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MMKPKYERILIKLSGEALAGERGVGIDLKTVQEMAKEIQEVAESGIQIALVIGGGNLWRGEPAAEAGMDRVQADYTGMLGTVMNALVMADSLKQLGVDTRVQTAIAMQSVAEPYIRGRALRHLEKGRIVIFGAGIGSPYFSTDTTAALRAAEIEADAILMAKNGVDGVYNADPKKDANAVKFNELTHREVISRGLKIMDATASTLSMDNDIDLVVFNMNEPGNIKRVVFGEPIGTTVSNSSEEK", - "output": "cytoplasm ; ATP binding ; UMP kinase activity ; 'de novo' CTP biosynthetic process ; phosphorylation" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MKLSAPLLVSLAAFSQAVTALVAFPGAEGFGANAIGGRNGQVYVVTNLNDSGTGSLRDAVSATDRIVVFAVGGVIKISDRIVVSKRVTILGQTAPGDGITVYGNGWSFSNADDAIVRYIRIRMGKGGSSGKDALGIAEGNRMIFDHVSVSWGRDETFSINGDASNITVQNSIIAQGLETHSCGGLMQTDGGVSLFRNLYIDNKTRNPKVKGVNEFTNNVVYNWGGGGGYIAGDSAGQSYANIIGNYFISGPSTSVTAFTRGNANFHGYVQNNYYDPDKDGQLDGFELGVSSSNYGGVAIMSSKYNYPAVAYTMSPAEAVTYVTKYAGASKVRDSVDTQLIAQVQSWGTEGGLISDEATMGGPGTLNGGTPAKDTDGDGIPDEAEKQLGTDPNTNDSMKLHSSGYTYLEVWANSLVPSTYH", - "output": "extracellular region ; metal ion binding ; pectate lyase activity ; cell wall organization ; polysaccharide catabolic process" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MAVDAKLIKELREITQAGMMDCKKALEASDNNIDNAIVWLRENGLAKAAKKTDRVAAEGIVLAKENDQKIVILEVNSETDFVAKNEKFLSLVDEIANALLNSNASSLEEGLQVKTDSGLTIEQSLISATATIGEKIALRRFELVNKTSGSSVIYNHANKRVSTLLVFDNKLDPTDAYNVAMHVAAMAPKYINMDQIPEDFKNAEMHIIKEQAKDDAKLQAKPANVLENILKGKLSKRLAEVSLLDQLFVIDESFKVGDFLKSKHVSLVKMIRYEVGEGIEKVVTNFADEVAAQLK", - "output": "cytoplasm ; translation elongation factor activity" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MSQNVIRIATRKSPLALWQAEFVKAELEKFHPDLTVELLPMSTKGDIILDTPLAKVGGKGLFVKELEVAMLENRADIAVHSMKDVPVDFPEGLGLEIICEREDPRDAFVSNNYKSISELPKGAVVGTSSLRRQCQIRAARPDLQIRDLRGNVGTRLGKLDAGTYDAIILAAAGLKRLKLEERITSFISAEESLPANGQGAVGIECRTDDERVKALLAPLEHAETRFRVIAERAMNTHLEGGCQVPIGAYAEIVDDTLTLRGLVGNPDGTQIIASTKVGPKTDAKALGISLAEELLSKGAKTILDAVYIK", - "output": "hydroxymethylbilane synthase activity ; peptidyl-pyrromethane cofactor linkage ; protoporphyrinogen IX biosynthetic process" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MEKYILEGATGSWEIVVGLEVHAQVISKSKLFSGAATAFGAEPNSQVSLIDAAMPGMLPVVNRECIRQAVRTGLAIGAVINRVSKFDRKNYFYADLPQGYQISQLYHPIVGEGSLLIDVDGEEREIGIERIHVEQDAGKLMHDQHPDKSYVDLNRAGIALMEIVSKPDIRSPAEAGAYIRKLRAILRYVGSCDGNMEEGSMRADVNVSVRKAGEPFGTRCEIKNVNSVRFVQAAIEYEARRQIEVIEDGGEIIQETRLFDHDKGETRSLRSKEDAHDYRYFPDPDLLPLELPESFIDECRESLPELPDTKRQRYITQLNLTPYTASVITADHETAAWFEAMLEYFKAPDAKIATAAANWLTSDLFGALKKLGRDITDSPVSPKQGAELVGLVADGTLSGSLAKQVFEIMLESGQDPAVIVEERGLKQTSDTGAIEEVINKILADNQDKVEQYRSGKDKLFGFFVGQTMRAMGGKANPAVVNEILKKLLSA", - "output": "asparaginyl-tRNA synthase (glutamine-hydrolyzing) activity ; ATP binding ; glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity ; translation" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MSLQQKIKAYLKLGKLGVVSLLDLAAVAGAFLAYKHGISLLPIIPMFIGGTLASMGAMIINSGIEIDRDKVMSRTSKRPTVVGYVNRKEAIIVGSLLAILGTALGFIDNILTAFFIALGVVIYIFVYTILLKPRTWLNIVIGGFAGSAAAWAGYTSLTNSLTLEGFLLGFLIFMWTPGHFWSLALKYREDYVNAHYPMLPAVVGITTSARAIAISNALMIPIVLLLGYYINLIALIAFSILSLFLMFLSYRLILNPTKEEAIKSFIFSNIYLMLILLIMIIVKLI", - "output": "plasma membrane ; protoheme IX farnesyltransferase activity ; heme O biosynthetic process" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MASLLKSLTLFKRTRDQPPLASGSGGAIRGIKHVIIVLIPGDSSIVTRSRLLDRLVRLVGDPKINGPKLTGILISILSLFVESPGQLIQRIIDDPDVSIKLVEVIPSINSACGLTFASRGASLDSEADEFFKIVDEGSKAQGQLGWLENKDIVDIEVDNAEQFNILLASILAQIWILLAKAVTAPDTAADSEMRRWIKYTQQRRVVGEFRMNKIWLDIVRNRIAEDLSLRRFMVALILDIKRSPGNKPRIAEMICDIDNYIVEAGLASFILTIKFGIETMYPALGLHEFSGELTTIESLMMLYQQMGETAPYMVILENSVQNKFSAGSYPLLWSYAMGVGVELENSMGGLNFGRSYFDPAYFRLGQEMVRRSAGKVSSALAAELGITKEEAQLVSEIASKTTEDRTIRATGPKQSQITFLHSERSEVANQQPPTINKRSENQGGDKYPIHFSDERLPGYTPDVNSSEWSESRYDTQIIQDDGNDDDRKSMEAIAKMRMLTKMLSQPGTSEDNSPVYSDKELLN", - "output": "helical viral capsid ; host cell cytoplasm ; ribonucleoprotein complex ; viral nucleocapsid ; RNA binding ; structural molecule activity" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MPRSLKKGPFLDLHLLKKVEKAVESGDKKPIKTWSRRSMIIPSMIGLTIAVHNGRQHVPVYVSDEMIGHKLGEFAPTRTYRGHAADKKAKK", - "output": "cytoplasm ; small ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MLRTMLKSKIHRATVTQAYLHYVGSVTIDADLMGAADLLEGEQVTIVDINNGARLVTYAIAGERGTGVIGINGAAAHLVHPGDLVILISYGTMEDAEAHAYQPRIVFVDADNKPIDLGHDPGSVPLDISVAAELFDPRIGAR", - "output": "cytoplasm ; aspartate 1-decarboxylase activity ; alanine biosynthetic process ; pantothenate biosynthetic process" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MSGALLVAGTSSDAGKSVVVAGLCRLLARRGVRVAPFKAQNMSNNSAVTVEGGEIGRAQAIQARAAGLEPSVRFNPILLKPGSDRTSQLVIKGQVAESVTATSYVQHRDRLAALVLNELTCLRDEFDAVICEGAGSPAEINLRATDLANMGLARAADLAVILVGDIDRGGLLAHLFGTVAVLDPQDQALIAGFVVNKFRGDPALLQPGLRRLHDITGRPTYGVLPYADRLWLDAEDSLSVLAHRVVGAPDPPLGDDWLRVAAVRLPRISNSTDVEALACEPGVLVRWVSEPSDVADADLVVIPGSKATVADLSWLRERGLAAAITAHAAAGRPVLGICGGFQMLCRRIDDRVESGAGEVAGLGLLDADIAFHPAKTLRRWQRPLAGYEIHHGRVSRCAEHSWFDSDAEPQGLVRGAVFGTHWHGLLDNDDFRRAWLVRVADAAGRRFVPGDTDVAARRDAQLDLAADLLAAHLDVDAVLGLLDGPPPRPRLATRLCR", - "output": "ABC-type vitamin B12 transporter activity ; catalytic activity ; cobalamin biosynthetic process ; glutamine metabolic process" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MRNILPFLTRIPVKGDFEKARNELWAFPLVALVSSALPTLILYLGLPLSNLLAVLALYWTIGLLHLDGLADWADGIMAKGDRERKIEVMKDVNTGIAGLFAVVIVLLLQVYSLQLLPFYALFLAELNSKYAMLLALATKRPLGKGLGAYFMEGMNGRQLALGTLLYVLLGLSVVLFEPRALAGILGLLFGVHIIRISLKNFDGLNGDCLGATAEITRAGTLVVMALVWWYL", - "output": "plasma membrane ; adenosylcobinamide-GDP ribazoletransferase activity ; cobalamin 5'-phosphate synthase activity ; cobalamin biosynthetic process" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MTDSNDPVVRGYLLQLIGEEGIEMIENMPEGEVTDEQIAEASGVMLNIVRRTLFIMNENNLAVCRRERDSSSGWLTYLWQLDLSDIESHLVKEKKRITKNLEIRYNFEVDSVFYTCPEGCVRFEFKEASKCEFMCPACGEDMMFEDNSVMVKKLRDRLDALEASS", - "output": "DNA binding ; regulation of DNA-templated transcription ; transcription initiation at RNA polymerase II promoter" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MEHFLLEVAAAPLRLIAAKNEKSRSELGRFLAKQVWTPQDRQCVLSTLAQLLLDKDCTVLVGRQLRPLLLDLLERNAEAIKAGGQINHDLHERLCVSMSKLIGNHPDVLPFALRYFKDTSPVFQRLFLESSDANPVRYGRRRMKLRDLMEAAFKFLQQEQSVFRELWDWSVCVPLLRSHDTLVRWYTANCLALVTCMNEEHKLSFLKKIFNSDELIHFRLRLLEEAQLQDLEKALVLANPEVSLWRKQKELQYLQGHLVSSDLSPRVTAVCGVVLPGQLPAPGELGGNRSSSREQELALRSYVLVESVCKSLQTLAMAVASQNAVLLEGPIGCGKTSLVEYLAAVTGRTKPPQLLKVQLGDQTDSKMLLGMYRCTDVPGEFVWQPGTLTQAATMGHWILLEDIDYAPLDVVSVLIPLLENGELLIPGRGDCLKVAPGFQFFATRRLLSCGGNWYRPLNSHATLLDKYWTKIHLDNLDKRELNEVLQSRYPSLLAVVDHLLDIYIQLTGEKHHSWSDSSVGCEQAPEEVSEARRENKRPTLEGRELSLRDLLNWCNRIAHSFDSSSLSASLNIFQEALDCFTAMLSEHTSKLKMAEVIGSKLNISRKKAEFFCQLYKPEIVINELDLQVGRVRLLRKQSEAVHLQREKFTFAATRPSSVLIEQLAVCVSKGEPVLLVGETGTGKTSTIQYLAHITGHRLRVVNMNQQSDTADLLGGYKPVDHKLIWLPLREAFEELFAQTFSKKQNFTFLGHIQTCYRQKRWHDLLRLMQHVHKSAVNKDGKDSETGLLIKEKWEAFGLRLNHAQQQMKMTENTLLFAFVEGTLAQAVKKGEWILLDEINLAAPEILECLSGLLEGSSGSLVLLDRGDTEPLVRHPDFRLFACMNPATDVGKRNLPPGIRNRFTELYVEELESKEDLQVLIVDYLKGLSVNKNTVQGIINFYTALRKESGTKLVDGTGHRPHYSLRTLCRALRFAASNPCGNIQRSLYEGFCLGFLTQLDRASHPIVQKLICQHIVPGNVKSLLKQPIPEPKGGRLIQVEGYWIAVGDKEPTIDETYILTSSVKLNLRDIVRVVSAGTYPVLIQGETSVGKTSLIQWLAAATGNHCVRINNHEHTDIQEYIGCYTSDSSGKLVFKEGVLIDAMRKGYWIILDELNLAPTDVLEALNRLLDDNRELLVTETQEVVKAHPRFMLFATQNPPGLYGGRKVLSRAFRNRFVELHFDELPSSELETILHKRCSLPPSYCSKLVKVMLDLQSYRRSSSVFAGKQGFITLRDLFRWAERYRLAEPTEKEYDWLQHLANDGYMLLAGRVRKQEEIDVIQEVLEKHFKKKLCPQSLFSKENVLKLLGKLSTQISTLECNFGHIVWTEGMRRLAMLVGRALEFGEPVLLVGDTGCGKTTICQVFAALANQKLYSVSCHLHMETSDFLGGLRPVRQKPNDKEEIDTSRLFEWHDGPLVQAMKEDGFFLLDEISLADDSVLERLNSVLEVEKSLVLAEKGSPEDKDSEIELLTAGKKFRILATMNPGGDFGKKELSPALRNRFTEIWCPQSTSREDLIQIISHNLRPGLCLGRIDPKGSDIPEVMLDFIDWLTHQEFGRKCVVSIRDILSWVNFMNKMGEEAALKRPEIISTVTSFVHAACLVYIDGIGSGVTSSGFGTALLARKECLKFLIKRLAKIVRLTEYQKNELKIYDRMKAKEFTGIDNLWGIHPFFIPRGPVLHRNNIADYALSAGTTAMNAQRLLRATKLKKPILLEGSPGVGKTSLVGALAKASGNTLVRINLSEQTDITDLFGADLPVEGGKGGEFAWRDGPLLAALKAGHWVVLDELNLASQSVLEGLNACFDHRGEIYVPELGMSFQVQHEKTKIFGCQNPFRQGGGRKGLPRSFLNRFTQVFVDPLTVIDMEFIASTLFPAIEKNIVKKMVAFNNQIDHEVTVEKKWGQKGGPWEFNLRDLFRWCQLMLVDQSPGCYDPGQHVFLVYGERMRTEEDKKKVIAVFKDVFGSNSNPYMGTRLFRITPYDVQLGYSVLSRGSCVPHPSRHPLLLLHQSFQPLESIMKCVQMSWMVILVGPASVGKTSLVQLLAHLTGHTLKIMAMNSAMDTTELLGGFEQVDLIRPWRRLLEKVEGTVRALLRDSLLISADDAEVVLRAWSHFLLTYKPKCLGEGGKAITMEIVNKLEAVLLLMQRLNNKINSYCKAEFAKLVEEFRSFGVKLTQLASGHSHGTFEWVDSMLVQALKSGDWLLMDNVNFCNPSVLDRLNALLEPGGVLTISERGMIDGSTPTITPNPNFRLFLSMDPVHGDISRAMRNRGLEIYISGEGDASTPDNLDLKVLLHSLGLVGNSVCDILLALHTETRSTVVGSPTSSVSTLIQTAILIVQYLQRGLSLDRAFSEACWEVYVCSQHSPANRKLVQALLEKHVSSLRAHETWGDSILGMGLWPDSVPSALFATEDSHLSTVRRDGQILVYCLNRMSMKTSSWTRSQPFTLQDLEKIMQSPSPENLKFNAVEVNTYWIDEPDVLVMAVKLLIERATNQDWMLRVKWLYHLAKNIPQGLESIQIHLEASAASLRNFYSHSLSGAVSNVFKILQPNTTDEFVIPLDPRWNMQALDMIRNLMDFDPQTDQPDQLFALLESAANKTIIYLDREKRVFTEANLVSVGSKKLRESVLRMSFEFHQDPESYHTLPHEIVVNLAAFFELCDALVLLWVQSSQGMVSDASANEILGSLRWRDRFWTVADTVKVDAPGLALLALHWHWVLKHLVHQIPRLLMNYEDKYYKEVQTVSEHIQNCLGSQTGGFAGIKKLQKFLGRPFPFKDKLVVECFSQLKVLNKVLAIREQMSALGESGWQEDINRLQVVASQWTLKKSLLQAWGLILRANILEDVSLDELKNFVHAQCLELKAKGLSLGFLEKKHDEASSLSHPDLTSVIHLTRSVQLWPAMEYLAMLWRYKVTADFMAQACLRRCSKNQQPQINEEISHLISFCLYHTPVTPQELRDLWSLLHHQKVSPEEITSLWSELFNSMFMSFWSSTVTTNPEYWLMWNPLPGMQQREAPKSVLDSTLKGPGNLNRPIFSKCCFEVLTSSWRASPWDVSGLPILSSSHVTLGEWVERTQQLQDISSMLWTNMAISSVAEFRRTDSQLQGQVLFRHLAGLAELLPESRRQEYMQNCEQLLLGSSQAFQHVGQTLGDMAGQEVLPKELLCQLLTSLHHFVGEGESKRSLPEPAQRGSLWVSLGLLQIQTWLPQARFDPAVKREYKLNYVKEELHQLQCEWKTRNLSSQLQTGRDLEDEVVVSYSHPHVRLLRQRMDRLDNLTCHLLKKQAFRPQLPAYESLVQEIHHYVTSIAKAPAVQDLLTRLLQALHIDGPRSAQVAQSLLKEEASWQQSHHQFRKRLSEEYTFYPDAVSPLQASILQLQHGMRLVASELHTSLHSSMVGADRLGTLATALLAFPSVGPTFPTYYAHADTLCSVKSEEVLRGLGKLILKRSGGKELEGKGQKACPTREQLLMNALLYLRSHVLCKGELDQRALQLFRHVCQEIISEWDEQERIAQEKAEQESGLYRYRSRNSRTALSEEEEEEREFRKQFPLHEKDFADILVQPTLEENKGTSDGQEEEAGTNPALLSQNSMQAVMLIHQQLCLNFARSLWYQQTLPPHEAKHYLSLFLSCYQTGASLVTHFYPLMGVELNDRLLGSQLLACTLSHNTLFGEAPSDLMVKPDGPYDFYQHPNVPEARQCQPVLQGFSEAVSHLLQDWPEHPALEQLLVVMDRIRSFPLSSPISKFLNGLEILLAKAQDWEENASRALSLRKHLDLISQMIIRWRKLELNCWSMSLDNTMKRHTEKSTKHWFSIYQMLEKHMQEQTEEQEDDKQMTLMLLVSTLQAFIEGSSLGEFHVRLQMLLVFHCHVLLMPQVEGKDSLCSVLWNLYHYYKQFFDRVQAKIVELRSPLEKELKEFVKISKWNDVSFWSIKQSVEKTHRTLFKFMKKFEAVLSEPCRSSLVESDKEEQPDFLPRPTDGAASELSSIQNLNRALRETLLAQPAAGQATIPEWCQGAAPSGLEGELLRRLPKLRKRMRKMCLTFMKESPLPRLVEGLDQFTGEVISSVSELQSLKVEPSAEKEKQRSEAKHILMQKQRALSDLFKHLAKIGLSYRKGLAWARSKNPQEMLHLHPLDLQSALSIVSSTQEADSRLLTEISSSWDGCQKYFYRSLARHARLNAALATPAKEMGMGNVERCRGFSAHLMKMLVRQRRSLTTLSEQWIILRNLLSCVQEIHSRLMGPQAYPVAFPPQDGVQQWTERLQHLAMQCQILLEQLSWLLQCCPSVGPAPGHGNVQVLGQPPGPCLEGPELSKGQLCGVVLDLIPSNLSYPSPIPGSQLPSGCRMRKQDHLWQQSTTRLTEMLKTIKTVKADVDKIRQQSCETLFHSWKDFEVCSSALSCLSQVSVHLQGLESLFILPGMEVEQRDSQMALVESLEYVRGEISKAMADFTTWKTHLLTSDSQGGNQMLDEGFVEDFSEQMEIAIRAILCAIQNLEERKNEKAEENTDQASPQEDYAGFERLQSGHLTKLLEDDFWADVSTLHVQKIISAISELLERLKSYGEDGTAAKHLFFSQSCSLLVRLVPVLSSYSDLVLFFLTMSLATHRSTAKLLSVLAQVFTELAQKGFCLPKEFMEDSAGEGATEFHDYEGGGIGEGEGMKDVSDQIGNEEQVEDTFQKGQEKDKEDPDSKSDIKGEDNAIEMSEDFDGKMHDGELEEQEEDDEKSDSEGGDLDKHMGDLNGEEADKLDERLWGDDDEEEDEEEEDNKTEETGPGMDEEDSELVAKDDNLDSGNSNKDKSQQDKKEEKEEAEADDGGQGEDKINEQIDERDYDENEVDPYHGNQEKVPEPEALDLPDDLNLDSEDKNGGEDTDNEEGEEENPLEIKEKPEEAGHEAEERGETETDQNESQSPQEPEEGPSEDDKAEGEEEMDTGADDQDGDAAQHPEEHSEEQQQSVEEKDKEADEEGGENGPADQGFQPQEEEEREDSDTEEQVPEALERKEHASCGQTGVENMQNTQAMELAGAAPEKEQGKEEHGSGAADANQAEGHESNFIAQLASQKHTRKNTQSFKRKPGQADNERSMGDHNERVHKRLRTVDTDSHAEQGPAQQPQAQVEDADAFEHIKQGSDAYDAQTYDVASKEQQQSAKDSGKDQEEEEIEDTLMDTEEQEEFKAADVEQLKPEEIKSGTTAPLGFDEMEVEIQTVKTEEDQDPRTDKAHKETENEKPERSRESTIHTAHQFLMDTIFQPFLKDVNELRQELERQLEMWQPRESGNPEEEKVAAEMWQSYLILTAPLSQRLCEELRLILEPTQAAKLKGDYRTGKRLNIRKVIPYIASQFRKDKIWLRRTKPSKRQYQICLAIDDSSSMVDNHTKQLAFESLAVIGNALTLLEVGQIAVCSFGESVKLLHPFHEQFSDYSGSQILRLCKFQQKKTKIAQFLESVANMFAAAQQLSQNISSETAQLLLVVSDGRGLFLEGKERVLAAVQAARNANIFVIFVVLDNPSSRDSILDIKVPIFKGPGEMPEIRSYMEEFPFPYYIILRDVNALPETLSDALRQWFELVTASDHP", - "output": "cytosol ; intermediate filament cytoskeleton ; membrane ; nucleolus ; nucleoplasm ; nucleus ; preribosome, large subunit precursor ; ATP binding ; ATP hydrolysis activity ; ribosomal large subunit assembly ; ribosomal large subunit export from nucleus" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MSWQQRVDDALTARRATDTLRRRYVVSQGAGRWLVANGRQYLNFSSNDYLGLSQHPQIIRAWQQAAIRFGVGSGGSGHISGYSVAHQALEEELAQWLGYPRALLFISGFAANQAVITALMKKNDRIVADRLSHASLLEAANLSPAQLRRFIHNDTQHLSRLLQSPCVGQQLVVTEGVYSMDGDSAPLAEIQHIARRHHAWLLVDDAHGIGVTGDEGRGTCWQRGVKPELLVVTFGKGFGVSGAAVLCSESVADYLLQFARHLVYSTSMPPAQAQALSASLAVIRSDEGRERREKLAALVQRFRAGVNASRFTLLNAHSAIQPLIVGDNSRALRLAEALRQQGCWATAIRPPTVPVGTARLRLTLTQAHEACDIDRLLEVLHGAGE", - "output": "8-amino-7-oxononanoate synthase activity ; pyridoxal phosphate binding ; biotin biosynthetic process" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MTATLIDGNALSKTLRAQAAERAAALAARGHRPGLAVILVGDNPASEVYVRNKIKACEDNGFFSLKDRYPATLSEPELLARIDELNRDPKIHGILVQLPLPAHIDSHKVIEAIAPEKDVDGFHVANAGALLTGKPLFRPCTPYGVMKMFEAYKIPLQGANAVVIGRSNIVGKPMALLLLEAGATVTICHSKTRELAAHTRAADIVVAAVGKRNVLTADMVKPGATVIDVGMNRNDEGKLCGDVDFAGVSQVAGHITPVPGGVGPMTITMLLVNTIEAAERAAAAA", - "output": "methenyltetrahydrofolate cyclohydrolase activity ; methylenetetrahydrofolate dehydrogenase (NADP+) activity ; histidine biosynthetic process ; methionine biosynthetic process ; purine nucleotide biosynthetic process ; tetrahydrofolate interconversion" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MRDLVDTTEMYLRTIYELEEEGIPPLRARIAERLDQSGPTVSQTVARMERDELLTVEKDRSLKLSAQGRALATAVMRKHRLAERLLTDVIGLPWEKVHDEACRWEHVMGDEVEVQLVKVLSEYATSPFGNPIPGLDELMEGIPDSERAELQQKIDNLQVVTSQRASDIEPPEPIQVKILSINEIIQVEHKLMAKFHALGMRPGSVVDLVATEDGLEFSNDNGAMVVPEELGHAVRVEKVN", - "output": "cytoplasm ; DNA binding ; DNA-binding transcription factor activity ; protein dimerization activity ; transition metal ion binding" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MAATKHSLADSEDRPTKKTKVDSEEKARLKAEKRERKEKKKSQESEPSAENSDADRAAEKERKKAKKAKKLEKKQKLAEAEASAEPAAEVSDEAPKKSKKEKKTTTTEASSNSEAPSSGSYIQTIALSNVPQAEIDEFLSKNEIHITDPKTENVTLRPVLEFHQLPATNLLEKKPSPFANYKAPTPIQSASWPFTLSGRDVIGVAETGSGKTMAFALPCVEAISALKHKHTKAVVVSPTRELAMQTYEQMASVAALNRMKCVCLYGGASKDDQRNLLNRGADIIVATPGRLKDFMSDGTVDLSHSAFAVLDEADRMLDKGFEEDIKMILSSCPPREKRQTLMFTATWPQSVQTLAATFMVSPVKIAIGSGGKETAGGAVELQANARISQSVEVLEPRGKEFRLLEVLKEHQQGSKKNDRILVFCLYKKEATRIENFLSRKGIRVGGIHGDLRQEQRTRSLEAFKSGQTPVLVATDVAARGLDIPEVKLVINVTFPLTIEDYVHRIGRTGRAGKTGQAITFFTVEDKSHSGSLVNILRGANQPVPEDLLKFGTTVKKKAHDMYGAFFKDVDMNAKSTKITFD", - "output": "nucleolus ; ATP binding ; ATP hydrolysis activity ; RNA binding ; RNA helicase activity ; rRNA processing" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MSSHHQILQIRSDPFVLSHCCRHTRLTSSLTLQSPLKQPFSCLPFRWRRSYRGGVRSSTTETHGSKKEALVSETATTSIELKRVYPFHEIEPKWQRYWEDNRIFRTPDDVDTSKPKFYVLDMFPYPSGAGLHVGHPLGYTATDILARLRRMQGYNVLHPMGWDAFGLPAEQYAIETGTHPKTTTLKNIDRFRLQLKSLGFSYDWDRELSTTEPDYYKWTQWIFLQLYKKGLAYQAEVPVNWCPALGTVLANEEVVDGVSERGGHPVIRKPMRQWMLKITAYADRLLEDLDELEWPESIKEMQRNWIGRSEGAELNFSILDGEGRETDKEITVYTTRPDTLFGATYMVVAPEHQLLSYFVTAEQKQQVEEYKDFASRKSDLERTELQKDKTGVFTGCYAKNPANGDAIPIWVADYVLASYGTGAIMAVPAHDTRDNEFALKYNIPIKWVVRNEANSSDDAKQVYPGLGIIENSSTLETGLDINQLSSKEAALKVIEWAERTGNGKKKVNYKLRDWLFARQRYWGEPIPILILDESGETIAISESELPLTLPELNDFTPTGTGEPPLSKAVSWVNTVDPSTGKPAKRETSTMPQWAGSCWYYLRFMDPKNPEALVDKEKEKYWSPVDVYVGGAEHAVLHLLYSRFWHKVLYDIGVVSTKEPFKCVINQGIILGEVQYTAWKDQEGNYVSADTEERLNEHQQVTIPEEKVIKSGDHFVLKEDPSIRLIPRVYKMSKSRGNVVNPDDVVLEYGADSLRLYEMFMGPFRDSKTWNTSGIEGVHRFLARTWRLVIGLPQSDGSFKDGTLVTDDEPTLEQLRTLHKCIAKVTEEIESTRFNTGISGMMEFVNAAYKWNNQPRGIIEPFVLLLSPYAPHMAEELWSRLGHPNSLAYESFPKANPDYLKNTTIVLPVQINGKTRGTIEVEEGCSEDDAFVLASQDDKLRKYLDGQSIKKRIYVPGKILNVILDRTNVKVTTK", - "output": "chloroplast ; chloroplast stroma ; cytosol ; mitochondrion ; aminoacyl-tRNA editing activity ; ATP binding ; leucine-tRNA ligase activity ; embryo development ending in seed dormancy ; leucyl-tRNA aminoacylation" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MPRRRVVAAREILPDPKFSSQTIAKFMNHVMQDGKKSIAESIVYGALERVQEKNKVDPVEFFETTLEKVRPMVEVKARRVGGATYQVPMEVRPSRRTALAMRWLVDAAAKRSEKTMALRLAGELLDAAEGKGAAIKKREDVHRMAEANKAFSHYRF", - "output": "small ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; tRNA binding ; translation" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MSAIPQEILHEAVTAKKASIQPFAASEKVYLQGSRPDLRVPMRKISQSDTPTNTGREKNPPVYVYDTSGPYTDPTVSVDLRLGLPPLREPWIEERGDTELLKGPSSSYGLQRQRDPALASLRFEHIRAPRRAKGGANVTQMHYARQGIITPEMEFVAIRENQKLEALAETYKFQHPGEAFGAAIPQVITPEFVRDEVARGRAIIPSNINHPESEPMIIGRNFLVKINCNLGNSAVSSSIEEEVEKMLWAIRWGGDTVMDLSTGKNIHETREWIIRNSPVPIGTVPIYQALEKVDGKAEELTWEIFRDTLIEQAEQGVDYFTIHAGIRLPFIPLTAKRTTGIVSRGGSIMAKWCLAHHKESFLYTHFEDICEIMKAYDVAFSLGDGLRPGSIADANDEAQFAELRTLGELTRIAWKHDVQVMIEGPGHVPMHMIKANMEEQLKHCHEAPFYTLGPLTTDIAPGYDHITSAIGAAMIGWYGTAMLCYVTPKEHLGLPNKQDVRDGIIAYKIAAHAADLAKGHPGAQARDNALSKARFEFRWQDQFNLSLDPEKALEFHDETLPQEGAKQAHFCSMCGPHFCSMKITQDVRDYAREHGLDEAQALAKGMEEKSDEFVRSGAEVYQRT", - "output": "4 iron, 4 sulfur cluster binding ; carbon-carbon lyase activity ; zinc ion binding ; thiamine biosynthetic process ; thiamine diphosphate biosynthetic process" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MRRFALTVALPKGRMFREAYEVLKRAGLDLPEVEGERTLLHGKEGGVALLELRNKDVPIYVDLGIAEIGVVGKDVLLDSGRDLFEPVDLGFGACRLSLIRRPGDTGPIRRVATKYPNFTARLLKERGWAADVVELSGNIELAAVTGLADAVVDVVQTGATLRAAGLVEVEVLAHSTARLVVNRQALKLKRAVLKPLIQRLRELSGS", - "output": "cytoplasm ; ATP binding ; ATP phosphoribosyltransferase activity ; histidine biosynthetic process" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MIDKSAFIHPTAIVEDGAVIGANAHIGPFCIVGPQVEIGEGTVLKSHVVVNGQTKIGRDNEIYQFASIGEVNQDLKYAGEPTRVEIGDRNRIRESVTIHRGTVQGGGLTKVGSDNLLMINAHVAHDCTVGNRCILANNATLAGHVSVDDFAIIGGMTAVHQFCIIGAHVMVGGCSGVAQDVPPYVIAQGNHATPFGVNIEGLKRRGFSREGLVAIRNAYKLLYRSGKTLDEAKLEIAELAEKHPEVKAFTEFFERSTRGPIR", - "output": "cytoplasm ; acyl--UDP-N-acetylglucosamine O-acyltransferase activity ; lipid A biosynthetic process" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MACSTHLLSQSLYPLNRANPAAARGHLRFQASPSVRLGSGTSRRRALGLRVAASAEQGRRQVEVEYDLQAKFNKLADQIDQNAGITRLNLFSPCKINVFLRITGKRPDGFHDLASLFHVISLGDTIKFSLSPSKSKDRLSTNVAGVPVDESNLIIKALNLYRKKTGTDNFFWIHLDKKVPTGAGLGGGSSNAATALWAANQFSGCIASEKELQEWSGEIGSDIPFFFSQGAAYCTGRGEIVEDIRNPLPANLPMVLVKPPEACSTAEVYKRLRLEHTSQTDPLVLLKEITENGISQDACVNDLEPPAFEVLPSLKRLKKRIIAANRGDYDAVFMSGSGSTIVGIGSPDPPAFVYDDDDYKDTFVSEACFLTRNENEWYREPISSKITSEEDLPPEVASVSD", - "output": "chloroplast stroma ; 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity ; ATP binding ; isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway ; phosphorylation ; terpenoid biosynthetic process" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MPLLDSFTVDHTRMNAPAVRIAKSMVTPKGDTITVFDLRFCVPNKEILSERGIHTLEHLFAGFMREHLNGDSVEIIDISPMGCRTGFYMSLIGAPTESIVADSWLAAMQDVLKVAVQSDIPELNEYQCGTFEMHSLEQAQEIARNIIASGINVNRNDDLSLSEEILKGL", - "output": "iron ion binding ; S-ribosylhomocysteine lyase activity ; quorum sensing" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MPPVTPLLDTVSSPADTRGLSIAQLRQLADEVRAETIDAVSQTGGHLGAGLGVVELTVALHHVYETPKDILIWDVGHQAYPHKILTGRRDRIRTLRQGGGLSGFTKRAESDYDPFGAAHAATSISAALGFCAARDREGRDNKVVAVIGDGSMSAGMAYEAMNNAYETTKQLTVILNDNDMSIAPPVGGMSAYMARLVSGGGYQSLRNLGKAVSRAFPRPLQEAARKAEEYARGMVTGGTFFEELGFYYVGPIDGHDMDALVHVLQNARKIDDKPVLVHVVTQKGKGYAPAEKAADKYHGVVKFDVVTGAQAKSQAAAPSYTKVFAQELVKHAERDERVVAITAAMPSGTGLDLFGQRFPERTFDVGIAEQHAVTFAAGLAADGMKPFAAIYSTFLQRGYDQVVHDVAIQSLPVRFAIDRAGLVGADGPTHAGSFDVGFMGQLPGMVVMGPADEAELARAIATAVAIDDRPSAFRYPRGEGVGVEIPALADPLEIGRGRIVREGTAVAILSFGTRLGESLKAADMLAARGLSATVADARFAKPLDVDLLLRLAREHEALITVEEGAVGGFGGFVLHALAEHGALDRGLKIRTLTLPDIFQDQDKPEAMYAQAGLDAEGIVRAALAALGIDNASVKGRRA", - "output": "1-deoxy-D-xylulose-5-phosphate synthase activity ; magnesium ion binding ; thiamine pyrophosphate binding ; 1-deoxy-D-xylulose 5-phosphate biosynthetic process ; terpenoid biosynthetic process ; thiamine biosynthetic process" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MSVSQVTDASFKQEVINNNLPVLVDFWAPWCGPCRMVSPVVDEIAEEYESSIKVVKINTDDNPTIAAEYGIRSIPTLMIFKAGERVDTVIGAVPKSTLASTLNKYIS", - "output": "chloroplast ; protein-disulfide reductase activity" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MKRVVLTGTGSGVGKTTIATGIMKALSDEHKIQPFKVGPDYIDPSYHNCATGVSSRNLDSFFMSDGQIRQSFKNGMTSSHADYGIIEGVRGLYEGISPTNDIGSTSSIAKALNSPVILIINSRSLVRSAAAMTLGFKALDSRIDIEGVILNNVKSQKHYLKTKEAVEKLANTRVLGGIERDNSISMEQRHLGLIPAVEQERISGLVEKWGELIRENIDLDALMEIMDNSNPIINEYEPIWSPNKTKHKTRIAVPFDEAFNFYYKENLEALEYNNAKIEYFSPIHDEQLPSVDALYIGGGYPEIFKKELSKNTTMLESIKEFSQDNHPIYAECGGLMYLCKTIDSLPMVDVFPYHSMLTKRVQGLSYTIAHVQRDNPILKKNTTYHGHEFHYSKVEYTGSNSNDFAFSMRRGVGITGKYDGLLKNNTLASYIHTHTACLPDFGYNFTQSAYENK", - "output": "ATP binding ; cobyrinic acid a,c-diamide synthase activity ; cobalamin biosynthetic process ; glutamine metabolic process ; methanogenesis" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MGNNFWSTWSPSQRIFSLIWPATILYLIMKLLIEKMWGKNRGAVERFQTRREALFDDFKSRSAPASLVNNPRIVKGNETAEQIETTFNEILKLDLIALKSALQTDKYNAYTVLCAFVWRAIDVNSEINCITEVIREAFNTAEALDDNYAQTGEKGQLFGLPFSVKSNFYMENYDVTVGLAKLLEQPKTTTCPMVQFLSDQGAVPFCLTNVPQGLLSYVSSNPIYGTTKNPWDFSRTPGGSSGGEAALLAAGGAAFGIGSDLAGSLRIPAAFCGLVTLKPTQDRLCVTDTHGGLPGRGRLGLSFGFYTRSVKEQEFLLGLIVGRSEYLELCPMSSPAKLEKHIEKDQKLVIGWFVDDGFNPVVPSNRRAVEETVKSLQAKGHQVVELKLADVSEEFPPFAVADMLFRNVMPDNGAYMSEMYAGEQYDEHMKLFIRLVCLKQNFLVSFLLRYGVMPFAKLALSKRLACIGSAYNSDLAACRQNQENTDSYKLQWIRYWKSKKIDALICPSFITPAQPFEYPAQLSNGAFITGLFNMLDVPAGVVPVSPVNQKDVDQLIDGFSTEGDLLLKKQREAARGTTGLPNAVQVVTLPNCEEMCLRVMRLVEESAEGVQRLQWRVGASAAPIDVENTPAGVVSSLEHFERVNLLH", - "output": "acylglycerol lipase activity ; amidase activity ; fatty acid amide hydrolase activity ; fatty acid catabolic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MNKIRFLDKYLVQKIAAGESIDRPCSILRELLDNSIDSGATKIEVFLEEGGIHKILIIDNGIGIGKEDLKICYLPHTTSKISSEEDLRKIETLGFRGEALSSIAICSNISITSSTTGNESYQIEVENGIEKCFKKQPAINGTIVNVTKIFHNFPARKRFLKQEPIETKMCLKVLEEKIITHPEINFEINLNQKLRKIYFKESLIDRVQNVYGNVIENNKFKVLKKEHENIKIELFLAPANFSKKSKRHIKTFVNRRPIDQKDLLEAITNGHSRIISPGNFPICYLFLEINPEYIDFNVHPQKKEVRFFNLPFLFKLISDNINNFFDKDINSYNEIVIKRQLTDDDNLIEMINQPKNLNKTNTYDIIQNKNLETEHTVNDLSKNIIQNDIGLRRYNSIIQNRPSFKENITNIFSDKFLEFEEPPNKNEKEEIKFNYIGQIFSEFLIVEKVNEIYFIDQHAVHEKIIYEKLRNSKKTVQKLLIPIEFTIVDKNIEEIIDSEIEEYKKMDIIISKIGPKKYQLESIPNICNQYENTLINFFQSRKSRTINSLESDLYANIACRKAVKTNDILSLEFSKFLIDEFFKLEIKHCPHGRKIYYKISKFELEKKVARA", - "output": "mismatch repair complex ; ATP binding ; ATP hydrolysis activity ; ATP-dependent DNA damage sensor activity ; mismatched DNA binding ; mismatch repair" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MLLRKGTVYVLVIRADLVNAMVAHARRDHPDEACGVLAGPEGSDRPERHIPMTNAERSPTFYRLDSGEQLKVWRAMEDADEVPVVIYHSHTATEAYPSRTDVKLATEPDAHYVLVSTRDPHRHELRSYRIVDGAVTEEPVNVVEQY", - "output": "metal ion binding ; metallopeptidase activity ; cysteine biosynthetic process ; proteolysis" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MAPAAASGGSTLPSGFSVFVTFPDLLFIFEFIFGGLVWILIASSLVPMPLVQGWVMFVSVFCFLATTSLMVMYIIGTHGGETSWITLDAAYHCVAALFYLSASVLEALATITMFDGFTYRHYHENIAAVVFAYVATLLYVIHAVFSLIRWKSS", - "output": "apical plasma membrane ; endoplasmic reticulum ; hinge region between urothelial plaques of apical plasma membrane ; membrane raft ; plasma membrane raft ; Schmidt-Lanterman incisure ; structural constituent of myelin sheath ; central nervous system myelination ; myelination ; positive regulation of extrinsic apoptotic signaling pathway via death domain receptors ; protein insertion into plasma membrane ; protein localization to paranode region of axon" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MSTQFRKSNHNSHSSKKLNPALKSKIDTLTELFPDWTSDDLIDIVQEYDDLETIIDKITSGAVTRWDEVKKPAKKEKYEKKEQQHSYVPQQHLPNPEDDITYKSSNNSNSFTSTKHNSSNNYTQARNKKKVQTPRAHTTGKHVNLDKGKHVPSKPVSNTTSWAAAVSVDTKHDVPQDSNDNNNEELEAQGQQAQENQEKEQEEQQQQEGHNNKEEHKQIEQPSLSSKKTTSKTSAPQPKKMSWAAIATPKPKAVKKTESPLENVAELKKEISDIKKDDQKSEASEEKVNEQETSAQEQEEETAEPSEENEDRVPEVDGEEVQEEAEEKEQVKEEEQTAEELEQEQDNVAAPEEEVTVVEEKVEISAVISEPPEDQANTVPQPQQQQQQQQQQPQQPQQQQQQPQQQQQPQQPQQQLQQQQQQQQQPVQAQAQAQEEQLSQNYYTQQQQQQFAQQQHQFQQQYLSQQQQYAQQQQQHPQPQSQQPQSQQSPQSQKQGNNVAAQQYYMYQNQFPGYSYPGMFDSQGYAYGQQYQQLAQNNAQTSGNANQYNFQQGYGQAGANTAAANLTSAAAAAAASPATAHAQPQQQQPYGGSFMPYYAHFYQQSFPYGQPQYGVAGQYPYQLPKNNYNYYQTQNGQEQQSPNQGVAQHSEDSQQKQSQQQQQQQPQGQPQPEVQMQNGQSVNPQQQMQFQQYYQFQQQQQQAAAAAAAAAQQGVPYGYNGYDYNSKNSRGFY", - "output": "chromosome, telomeric region ; cytoplasm ; nucleus ; DNA binding ; ubiquitin binding ; DNA repair" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MARKPASSQDFETTLAKLENIVAHLENGDLPLEEALKEFEQGVQLAKLGQERLQQAEQRIQILLQKTEDAPLNDYKGNA", - "output": "cytoplasm ; exodeoxyribonuclease VII complex ; exodeoxyribonuclease VII activity ; DNA catabolic process" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MQKLQLCVYIYLFMLIVAGPVDLNENSEQKENVEKEGLCNACTWRQNTKSSRIEAIKIQILSKLRLETAPNISKDAIRQLLPKAPPLRELIDQYDVQRDDSSDGSLEDDDYHATTETIITMPTESDFLMQVDGKPKCCFFKFSSKIQYNKVVKAQLWIYLRPVETPTTVFVQILRLIKPMKDGTRYTGIRSLKLDMNPGTGIWQSIDVKTVLQNWLKQPESNLGIEIKALDENGHDLAVTFPGPGEDGLNPFLEVKVTDTPKRSRRDFGLDCDEHSTESRCCRYPLTVDFEAFGWDWIIAPKRYKANYCSGECEFVFLQKYPHTHLVHQANPRGSAGPCCTPTKMSPINMLYFNGKEQIIYGKIPAMVVDRCGCS", - "output": "extracellular space ; cytokine activity ; growth factor activity ; heparin binding ; identical protein binding ; myoblast migration involved in skeletal muscle regeneration ; negative regulation of myoblast proliferation ; negative regulation of satellite cell differentiation ; negative regulation of skeletal muscle satellite cell proliferation ; positive regulation of lamellipodium assembly ; positive regulation of macrophage chemotaxis ; positive regulation of pathway-restricted SMAD protein phosphorylation ; SMAD protein signal transduction" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MTDVSRVLKEARDQGRLTTLDYANLIFDDFMELHGDRHFSDDGAIVGGLAYLAGQPVTVIGIQKGKNLQDNLARNFGQPNPEGYRKALRLMKQAEKFGRPVVTFINTAGAYPGVGAEERGQGEAIAKNLMEMSDLKVPIIAIIIGEGGSGGALALAVADQVWMLENTMYAVLSPEGFASILWKDGSRATEAAELMKITAGELYKMGIVDRIIPEHGYFSSEIVDIIKANLIEQITSLQAKPLDQLLDERYQRFRKY", - "output": "acetyl-CoA carboxylase complex ; acetyl-CoA carboxylase activity ; ATP binding ; carboxyl- or carbamoyltransferase activity ; fatty acid biosynthetic process ; malonyl-CoA biosynthetic process" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MLFATLEHILTHISFSTISIVITIHLITLLVRELRGLRDSSEKGMIATFFSITGFLVSRWVSSGHFPLSNLYESLIFLSWTLYILHTIPKIQNSKNDLSTITTPSTILTQGFATSGLLTEMHQSTILVPALQSQWLMMHVSMMLLSYATLLCGSLLSAALLIIRFRNSFDFFSLKKNVFLKTFFFSEIEYLYAKRSALKNTSFPVFPNYYKYQLTERLDSWSYRVISLGFTLLTVGILCGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSRTNPNWKGTNSALVASIGFLIIWICYFGINLLGIGLHSYGSFTLPSK", - "output": "chloroplast thylakoid membrane ; heme binding ; cytochrome complex assembly" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MKDLLKFLKAQTKTEEFDAIKIALASPDMIRSWSFGEVKKPETINYRTFKPERDGLFCARIFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIELASPTAHIWFLKSLPSRIGLLLDMPLRDIERVLYFESYVVIEGGMTNLERQQILTEEQYLDALEEFGDEFDAKMGAEAIQALLKSMDLEQECEQLREELNETNSETKRKKLTKRIKLLEAFVQSGNKPEWMILTVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQEAVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPYLRLHQCGLPKKMALELFKPFIYGKLELRGLATTIKAAKKMVEREEAVVWDILDEVIREHPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEARALMMSTNNILSPANGEPIIVPSQDVVLGLYYMTRDCVNAKGEGMVLTGPKEAERLYRSGLASLHARVKVRITEYKKDANGELVAKTSLKDTTVGRAILWMIVPKGLPYSIVNQALGKKAISKMLNTCYRILGLKPTVIFADQIMYTGFTYAARSGASVGIDDMVIPEKKHEIISEAEAEVAEIQEQFQSGLVTAGERYNKVIDIWAAANDRVSKAMMDNLQTETVINRDGQEEKQVSFNSIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGARKGLADTALKTANSGYLTRRLVDVAQDLVVTEDDCGTHEGIMMTPVIEGGDVKEPLRDRVLGRVTAEDVLKPGTANILVPRNTLLHEQWCDLLEENSVDAVKVRSVVSCDTDFGVCAHCYGRDLARGHIINKGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAESSIQVKNKGSIKLSNVKSVVNSSGKLVITSRNTELKLIDEFGRTKESYKVPYGAVLAKGDGEQVAGGETVANWDPHTMPVITEVSGFVRFTDMIDGQTITRQTDELTGLSSLVVLDSAERTAGGKDLRPALKIVDAQGNDVLIPGTDMPAQYFLPGKAIVQLEDGVQISSGDTLARIPQESGGTKDITGGLPRVADLFEARRPKEPAILAEISGIVSFGKETKGKRRLVITPVDGSDPYEEMIPKWRQLNVFEGERVERGDVISDGPEAPHDILRLRGVHAVTRYIVNEVQDVYRLQGVKINDKHIEVIVRQMLRKATIVNAGSSDFLEGEQVEYSRVKIANRELEANGKVGATYSRDLLGITKASLATESFISAASFQETTRVLTEAAVAGKRDELRGLKENVIVGRLIPAGTGYAYHQDRMRRRAAGEAPAAPQVTAEDASASLAELLNAGLGGSDNE", - "output": "DNA-directed RNA polymerase complex ; DNA binding ; DNA-directed 5'-3' RNA polymerase activity ; magnesium ion binding ; zinc ion binding ; DNA-templated transcription" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MCPYRLDPEGADTHGETARLREQGPIARVELQDGVLAWSVHDYAVAKQIMADERFSKNPRKNWPAYINGEISNGWPLITWVAMDTMATQDGADHARLRKLLLKAFTERRVESMRPHIEKTVKELLDNMAAKADDEIVDIKEMFHAELPTRLMCDLFGVPEERRAEVLAGGHKNIDTRISSEAAEANLGQWQEAISDLVEYKRHHPGDDLTSALIEARDEGSRLSDSELIGTLHLLLGAGSETLVNALAHSSLALLVDADLRKKVTSGEIPWVNVWEETLRVESPVAHLPFRYATEDFEIGGVKISKGDPLLVDFAGIGRDPAVHSDAPDEFDALRPDKTHLSFGHGVHYCLGARLAKHAWMIGIPALFERFPDMELAVRRDELKGQGSFVVNGHASLPVHLKGRAAALAR", - "output": "heme binding ; iron ion binding ; monooxygenase activity ; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen ; antibiotic biosynthetic process" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MSKKPRQIAFYGKGGIGKSTTSQNTLAQLATTFGQKIMIVGCDPKADSTRLILNTKAQQTVLHLAAELGSVEDLELEDVVATGFGGILCVESGGPEPGVGCAGRGIITSINFLEEQGAYDGMDFISYDVLGDVVCGGFAMPIRENKAQEIYIVCSGEMMAMYAANNIARGILKYAQSGSVRLGGLICNSRKTDREDELITELARRLNTQMIHFVPRDNVVQHAELRRMTVTQYNPEHPQANEYKQLADKILHNEKLTIPTPIEMDELEQLLIDFGVVEDEETAIKKLEAAGH", - "output": "4 iron, 4 sulfur cluster binding ; ATP binding ; carbonyl sulfide nitrogenase activity ; metal ion binding ; nitrogenase activity ; nitrogen fixation" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MPSSQAHSAVDTPIENHFPGSLFMVVAPSGAGKSTLVNALLAQDPSIRLSVSATTRKPRPGEQHGREYNFMTVDEFKACRDRGEFLEWAEVHGNYYATSRVWIEEQMRAGTDVLLEIDWQGAQQVHRRFANAVEIFILPPSLTALEDRLKKRGQDEPNVIVRRLLAAGSEMAHAPEADYVIINEVFEAALAELRTVVQAARLRYMAQKARHAELFVELGIH", - "output": "cytoplasm ; ATP binding ; guanylate kinase activity ; phosphorylation" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MSVQRPIRVLVVDDSPTMANMLTALLTEEPRIEVVGRAGDGNRAVQLARLLRPDVITMDLLLPGLDGPGAIAAIMSQSPARILVVSAVAEQRGVDLGFQAMSAGALELIGKPNVTNAEELRRWGKELAHSVCLMAEVPVISRRPRAATAPPPPTGARVDIFGVVASTGGPPALADVLSKLPRSLPVPLLIAQHITVGFTQGMVRWLSQVTPLPVSIAKDGERLEPGRVYFPLDGHDLLVDAAGLARLQPSQGGPCPSGDVMLTSLAAAFGRRSGGVVLTGMGEDGARGLLAIRRAGGVTFSQDEASSVVFGMPRAALDVKATDQGVPLASMPELILQSCTFAPFRGGRPEGGPTR", - "output": "cytoplasm ; phosphorelay response regulator activity ; protein-glutamate methylesterase activity ; protein-glutamine glutaminase activity ; chemotaxis ; protein deamination ; protein demethylation" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MAAKDVKFGNEARIKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPSITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATLLAQSIVNEGLKAVAAGMNPMDLKRGIDKAVISAVEELKNLSVTCSDSKAITQVGTISANADEKVGSLIAEAMEKVGNDGVITVEEGTGLQDELEVVKGMQFDRGYLSPYFINKSETGIVELENPYILMADKKISNIREMLPILESVAKSGKPLLIISEDLEGEALATLVVNSMRGIVKVAAVKAPGFGDCRKAMLQDISILTNGTVISEELAMELEKSTLEDLGQAKRVVISKDTTTIIGGVGEKHAIQARINQIRQEIQDASSDYDKEKLNERLAKLAGGVAVLKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALVRVAGKLSNLRGQNEDQNVGIRVALRAMEAPLRQIVSNSGEEPSAVTNNVKDGKGNYGYNAATDEYGDMIDFGILDPTKVTRSALQYAGSVAGLMITTECMVTDLPKEDKSSDLGSAPAGGMGGMGGMM", - "output": "cytoplasm ; ATP binding ; ATP-dependent protein folding chaperone ; isomerase activity ; unfolded protein binding ; protein refolding" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MPGSEDLRKGKDQMHSHRKRTMFTKKQLEDLNILFNENPYPNPSLQKEMASKIDIHPTVLQVWFKNHRAKLKKAKCKHIHQKQETPQPPIPEGGVSTSVGLRNADTLPRLPNAAHPIGLVYTGHRVPSFQLILYPNLKVPANDFIGHRIVHFGCCRDPNIYCLYPILESQVCAPSFHSGSPACSSNQSRER", - "output": "chromatin ; nucleus ; DNA-binding transcription factor activity, RNA polymerase II-specific ; RNA polymerase II cis-regulatory region sequence-specific DNA binding ; sequence-specific double-stranded DNA binding ; regulation of transcription by RNA polymerase II" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "AVMGRNLALNIESRGYTVSIFNRSREKTEEVIAENPGKKLVPYYTVKEFVESLETPRRILLMVKAGAGTDAAIDSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFNFIGTGVSGGEEGALKGPSIMPGGQKEAYELVAPILTKIAAVAEDGEPCVTYIGADGAGHYVKMVHNGIEYGDMQLIAEAYSLLKGGLNLSNEELAQTFTEWNNGELSSYLIDITKDIFTKKDEDGNYLVDVILDEAANKGTGKWTSQSALDLGEPLSLITESVFARYISSLKDQRVAASKVLSGPQAQSAGDKAEFIEKVRRALYLGKIVSYAQGFSQLRAASEEYNWDLNYGEIAKIFRAGCIIRAQFLQKITDAYAENPQIANLLLAPYFKQIADDYQQALRDVVAYAVQNGIPVPTFAAAVAYYDSYRAAVLPANLIQAQRDYFGAHTYKRI", - "output": "NADP binding ; phosphogluconate dehydrogenase (decarboxylating) activity ; D-gluconate metabolic process ; organic acid catabolic process ; pentose-phosphate shunt" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MKRLKKIDLNQKYDHKTVSEGVVDFWLTTDYANQDSDFCDPNAKPFSIIMPPPNLTGILHIGHAWNLSIQDLIVRYQKLVMGKINWIPGTDHAGIATQTKFESIQRTKEINYKKDDRTTHFNNIYQWSQESSQTIKNQAKSLGLALNWKKEKFTLSQESNKYVLDVFVKLYQQGYIVKKYTLVNWDTKLNTAISNIEVINKETTQKLHYIKYYLKDSNDYLVIATTRPETIYADVAVFVNPNDQRYLKYHNQMVINPLNNKLIPILVDEYIDMEFGSAVMKCTPGHDHNDYALSKKYQLEELSCINFDGTLNELALEFSGLDLYEARELIVKKLISEDKYVKFEEITSNVGYSDRSNVIVQPLLSKQWFLITTKFVDEIKKLVNNEDQIKIYPKRFLDTINNWLDHNQDWCISRQLVWGHQIPAWYHKDHPDEVIVSINSPGDDYYRDSDVLDTWFSSALWPLICFDDGLDQKEFNANFPNSLLVTAYDIVFFWVLRMIFMSWLLKKSIPFHDLLLHGLILDEHNRKMSKSLNNGVDPIQIIDQYGADALRLFLTSNTSPGEDVSYNVEKINAAASFLNKLWNLARYLKLIDQSKLTDQPLDSLDHWIIHRFNEVNAGIQDKLKEYRFALSNKQLSDFIWDDFANVYIELNKKAQWSKAKFELANDIFRKFLIMLHPSVPFITEQIYNTFEFSDSKPSIILEKWPGLIKIENALDHFDQIFNLIIKIRNFKQSFDLKNKDTLDLLYKNEVSYIKDLTKYLKTENVNLIKISDQKLNDLFLIATEDNEFYVVYTQDKTKIVDKLVVEIAKLEKEVERSSNIVNNKNFKKKAPKEKYEAELKKLSNYQEELKLKQDKLNSLK", - "output": "cytoplasm ; aminoacyl-tRNA editing activity ; ATP binding ; valine-tRNA ligase activity ; valyl-tRNA aminoacylation" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MTHPLVPPITDLAIPVAEQLGLEVVGIVFHTNQRPPVLRVDIRNPQQDTGLDDCERMSRALEAALDATEIIPDAYVLEVSSPGISRQLVTDREFISFKGFPVIVSTSPPHEGQQEWIGQLIRRDETKVYINQKGRVIEIPRSLITRVLLHDGE", - "output": "cytoplasm ; ribosomal small subunit biogenesis" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MTDKKLVKELAIEFGGSEKNVGAIEVQIAILTHDIERLKIHFETNKKDKHSKRGFIAKINKRKKLLAYLKDVNFESYQTTIQKLKIRK", - "output": "cytoplasm ; ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MPELPEVETSRRGIEPHLVGATILHAHIRNGRLRWPVSDEIYRLSDTPVLSVQRRAKYLLLELPDGWIIIHLGMSGSLRILSEALPAEKHDHVDLVMSNGKILRYTDPRRFGAWLWTKELEGHNVLAHLGPEPLSDEFNGEYLQQKCAKKKTAIKPWLMDNKLVVGVGNIYASESLFAAGIHPDRLASSLSTEECDLLARVIKAVLLRSIEQGGTTLKDFLQGDGKPGYFAQELQVYGRKGEPCRVCGTPIAATKHAQRATFYCRHCQK", - "output": "class I DNA-(apurinic or apyrimidinic site) endonuclease activity ; damaged DNA binding ; oxidized purine nucleobase lesion DNA N-glycosylase activity ; zinc ion binding ; base-excision repair" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MHRGIPKSSKTQTHTQQDRPPQPSTELEETRTSRARHSTTSAQRSTHYDPRTSDRPVSYTMNRTRSRKQTSHRLKNIPVHGNHEATIQHIPESVSKGARSQIERRQPNAINSGSHCTWLVLWCLGMASLFLCSKAQIHWDNLSTIGIIGTDNVHYKIMTRPSHQYLVIKLIPNASLIENCTKAELGEYEKLLNSVLEPINQALTLMTKNVKPLQSLGSGRRQRRFAGVVLAGVALGVATAAQITAGIALHQSNLNAQAIQSLRTSLEQSNKAIEEIREATQETVIAVQGVQDYVNNELVPAMQHMSCELVGQRLGLRLLRYYTELLSIFGPSLRDPISAEISIQALIYALGGEIHKILEKLGYSGSDMIAILESRGIKTKITHVDLPGKFIILSISYPTLSEVKGVIVHRLEAVSYNIGSQEWYTTVPRYIATNGYLISNFDESSCVFVSESAICSQNSLYPMSPLLQQCIRGDTSSCARTLVSGTMGNKFILSKGNIVANCASILCKCYSTSTIINQSPDKLLTFIASDTCPLVEIDGATIQVGGRQYPDMVYEGKVALGPAISLDRLDVGTNLGNALKKLDDAKVLIDSSNQILETVRRSSFNFGSLLSVPILSCTALALLLLIYCCKRRYQQTLKQHTKVDPAFKPDLTGTSKSYVRSL", - "output": "host cell plasma membrane ; membrane ; viral envelope ; virion membrane ; fusion of virus membrane with host plasma membrane ; viral entry into host cell" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MADKKSSPKKENPQDKTYAIVEASGKQFWLQPNRYYDFDRCQAEVDDVLTLENVLLLNDGKDLKLGKPYVKDAKVEIKVLEHRRGPKIIVYKMRPKKKTRRKNGHRQELTRVLVQSISIGSNTKKSKAVKTTASKVESD", - "output": "cytoplasm ; ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MEKMLLKSTTRHVRIFTAEVVNNDLKYHPNKLTLDLDPDNEFIWNEESLKKVNQKFTELVEERAGKSLDDYELRKIGSEVEGLIKYLLQNSLLSYNPECRVMNYSMGLPKTKEVL", - "output": "plasma membrane-derived thylakoid membrane ; oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor ; quinone binding" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MDFLHLGSFVFSSRLILGTGKFSNADLMIEAIKASGAQLVTVALRRFNREQIADDLFGPLSALQGITLMPNTSGASTAREAIHAAHIARELSGSPFIKVEIHPNPQHLMPDALETWEASRILAKEGFLVMPYIPADPVLAKRLEEVGCASVMPLGSAIGSGQGLANAGMIELIIRESGIPVIVDAGLRAPSEAAAAMEMGCGAVLVNSAVAVAGNPPEMANAFAEAVRAGRRAFKAELMPKSSFALSTSPLTTFLGKKS", - "output": "cytoplasm ; thiazole synthase activity ; thiamine diphosphate biosynthetic process" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MLNKRVIPCLDVNNGRVVKGTSFVNLRDAGDPVELAARYYREGADELVFLDISATTEERKTMAEVVEKVSKEVFIPLCVGGGLRSIADMTTLLRAGADKVSVNSAAVSDPDLISRGAEKFGRQCIVVAIDAKREGNSWQVYTHSGKKPTGLDAVEWAMKAEQLGAGEILLTSIDADGKNTGYDNELNREVGSRLNIPVIASGGAGSPEDLYNALDKGQADAVLAASIFHYGRYSIAEVKKYLKSKGLPVRLEN", - "output": "cytoplasm ; imidazoleglycerol-phosphate synthase activity ; lyase activity ; histidine biosynthetic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MDIERVEQVRAVERLAHRRGLALMPRAGLAAADFVAARLPAGAQVLALAGPGNNGGDALVAATLLQARGYRVAVVMPAGPARLPDDARRAWQDWCAAGGQASADLPAHAPALVIDGLFGIGLARPLDGAWQGLIDQVNAWRVPVLALDVPSGLSAASGQPLGDPPGRPVRATWTLSFIGVPAALRAPGAAAWCGEQYLSLLGLTPAFLAEAVGPCGQATATAARRSGP", - "output": "metal ion binding ; NADHX epimerase activity ; NADPHX epimerase activity ; nucleotide binding" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MDSITSAASVVAAGLAVGLGAIGPGLGQGNAAQGAVEGIARQPEAEGKIRGTLLLSFAFMESLTIYGLVVALVLLFANPFS", - "output": "plasma membrane-derived thylakoid membrane ; proton-transporting ATP synthase complex, coupling factor F(o) ; lipid binding ; proton-transporting ATP synthase activity, rotational mechanism" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MKNPKKKSGGFRIVNMLKRGVARVSPFGGLKRLPAGLLLGHGPIRMVLAILAFLRFTAIKPSLGLINRWGSVGKKEAMEIIKKFKKDLAAMLRIINARKEKKRRGADTSVGIVGLLLTTAMAAEVTRRGSAYYMYLDRNDAGEAISFPTTLGMNKCYIQIMDLGHMCDATMSYECPMLDEGVEPDDVDCWCNTTSTWVVYGTCHHKKGEARRSRRAVTLPSHSTRKLQTRSQTWLESREYTKHLIRVENWIFRNPGFALAAAAIAWLLGSSTSQKVIYLVMILLIAPAYSIRCIGVSNRDFVEGMSGGTWVDVVLEHGGCVTVMAQDKPTVDIELVTTTVSNMAEVRSYCYEASISDMASDSRCPTQGEAYLDKQSDTQYVCKRTLVDRGWGNGCGLFGKGSLVTCAKFACSKKMTGKSIQPENLEYRIMLSVHGSQHSGMIVNDTGHETDENRAKVEITPNSPRAEATLGGFGSLGLDCEPRTGLDFSDLYYLTMNNKHWLVHKEWFHDIPLPWHAGADTGTPHWNNKEALVEFKDAHAKRQTVVVLGSQEGAVHTALAGALEAEMDGAKGRLSSGHLKCRLKMDKLRLKGVSYSLCTAAFTFTKIPAETLHGTVTVEVQYAGTDGPCKVPAQMAVDMQTLTPVGRLITANPVITESTENSKMMLELDPPFGDSYIVIGVGEKKITHHWHRSGSTIGKAFEATVRGAKRMAVLGDTAWDFGSVGGALNSLGKGIHQIFGAAFKSLFGGMSWFSQILIGTLLMWLGLNTKNGSISLMCLALGGVLIFLSTAVSADVGCSVDFSKKETRCGTGVFVYNDVEAWRDRYKYHPDSPRRLAAAVKQAWEDGICGISSVSRMENIMWRSVEGELNAILEENGVQLTVVVGSVKNPMWRGPQRLPVPVNELPHGWKAWGKSYFVRAAKTNNSFVVDGDTLKECPLKHRAWNSFLVEDHGFGVFHTSVWLKVREDYSLECDPAVIGTAVKGKEAVHSDLGYWIESEKNDTWRLKRAHLIEMKTCEWPKSHTLWTDGIEESDLIIPKSLAGPLSHHNTREGYRTQMKGPWHSEELEIRFEECPGTKVHVEETCGTRGPSLRSTTASGRVIEEWCCRECTMPPLSFRAKDGCWYGMEIRPRKEPESNLVRSMVTAGSTDHMDHFSLGVLVILLMVQEGLKKRMTTKIIISTSMAVLVAMILGGFSMSDLAKLAILMGATFAEMNTGGDVAHLALIAAFKVRPALLVSFIFRANWTPRESMLLALASCLLQTAISALEGDLMVLINGFALAWLAIRAMVVPRTDNITLAILAALTPLARGTLLVAWRAGLATCGGFMLLSLKGKGSVKKNLPFVMALGLTAVRLVDPINVVGLLLLTRSGKRSWPPSEVLTAVGLICALAGGFAKADIEMAGPMAAVGLLIVSYVVSGKSVDMYIERAGDITWEKDAEVTGNSPRLDVALDESGDFSLVEDDGPPMREIILKVVLMTICGMNPIAIPFAAGAWYVYVKTGKRSGALWDVPAPKEVKKGETTDGVYRVMTRRLLGSTQVGVGVMQEGVFHTMWHVTKGSALRSGEGRLDPYWGDVKQDLVSYCGPWKLDAAWDGHSEVQLLAVPPGERARNIQTLPGIFKTKDGDIGAVALDYPAGTSGSPILDKCGRVIGLYGNGVVIKNGSYVSAITQGRREEETPVECFEPSMLKKKQLTVLDLHPGAGKTRRVLPEIVREAIKTRLRTVILAPTRVVAAEMEEALRGLPVRYMTTAVNVTHSGTEIVDLMCHATFTSRLLQPIRVPNYNLYIMDEAHFTDPSSIAARGYISTRVEMGEAAAIFMTATPPGTRDAFPDSNSPIMDTEVEVPERAWSSGFDWVTDHSGKTVWFVPSVRNGNEIAACLTKAGKRVIQLSRKTFETEFQKTKHQEWDFVVTTDISEMGANFKADRVIDSRRCLKPVILDGERVILAGPMPVTHASAAQRRGRIGRNPNKPGDEYLYGGGCAETDEDHAHWLEARMLLDNIYLQDGLIASLYRPEADKVAAIEGEFKLRTEQRKTFVELMKRGDLPVWLAYQVASAGITYTDRRWCFDGTTNNTIMEDSVPAEVWTRHGEKRVLKPRWMDARVCSDHAALKSFKEFAAGKRGAAFGVMEALGTLPGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFLLLVVLIPEPEKQRSPQDNQMAIIIMVAVGLLGLITANELGWLERTKSDLSHLMGRREEGATIGFSMDIDLRPASAWAIYAALTTFITPAVQHAVTTSYNNYSLMAMATQAGVLFGMGKGMPFYAWDFGVPLLMIGCYSQLTPLTLIVAIILLVAHYMYLIPGLQAAAARAAQKRTAAGIMKNPVVDGIVVTDIDTMTIDPQVEKKMGQVLLIAVAVSSAILSRTAWGWGEAGALITAATSTLWEGSPNKYWNSSTATSLCNIFRGSYLAGASLIYTVTRNAGLVKRRGGGTGETLGEKWKARLNQMSALEFYSYKKSGITEVCREEARRALKDGVATGGHAVSRGSAKLRWLVERGYLQPYGKVIDLGCGRGGWSYYAATIRKVQEVKGYTKGGPGHEEPMLVQSYGWNIVRLKSGVDVFHMAAEPCDTLLCDIGESSSSPEVEEARTLRVLSMVGDWLEKRPGAFCIKVLCPYTSTMMETLERLQRRYGGGLVRVPLSRNSTHEMYWVSGAKSNTIKSVSTTSQLLLGRMDGPRRPVKYEEDVNLGSGTRAVVSCAEAPNMKIIGNRIERIRSEHAETWFFDENHPYRTWAYHGSYEAPTQGSASSLINGVVRLLSKPWDVVTGVTGIAMTDTTPYGQQRVFKEKVDTRVPDPQEGTRQVMSMVSSWLWKELGKHKRPRVCTKEEFINKVRSNAALGAIFEEEKEWKTAVEAVNDPRFWALVDKEREHHLRGECQSCVYNMMGKREKKQGEFGKAKGSRAIWYMWLGARFLEFEALGFLNEDHWMGRENSGGGVEGLGLQRLGYVLEEMSRIPGGRMYADDTAGWDTRISRFDLENEALITNQMEKGHRALALAIIKYTYQNKVVKVLRPAEKGKTVMDIISRQDQRGSGQVVTYALNTFTNLVVQLIRNMEAEEVLEMQDLWLLRRSEKVTNWLQSNGWDRLKRMAVSGDDCVVKPIDDRFAHALRFLNDMGKVRKDTQEWKPSTGWDNWEEVPFCSHHFNKLHLKDGRSIVVPCRHQDELIGRARVSPGAGWSIRETACLAKSYAQMWQLLYFHRRDLRLMANAICSSVPVDWVPTGRTTWSIHGKGEWMTTEDMLVVWNRVWIEENDHMEDKTPVTKWTDIPYLGKREDLWCGSLIGHRPRTTWAENIKNTVNMVRRIIGDEEKYMDYLSTQVRYLGEEGSTPGVL", - "output": "centrosome ; extracellular region ; host cell endoplasmic reticulum membrane ; host cell nucleus ; host cell perinuclear region of cytoplasm ; membrane ; viral capsid ; viral envelope ; virion membrane ; 4 iron, 4 sulfur cluster binding ; ATP binding ; ATP hydrolysis activity ; double-stranded RNA binding ; exogenous protein binding ; GTP binding ; metal ion binding ; molecular adaptor activity ; mRNA (guanine-N7-)-methyltransferase activity ; mRNA (nucleoside-2'-O-)-methyltransferase activity ; protein dimerization activity ; RNA helicase activity ; RNA-dependent RNA polymerase activity ; serine-type endopeptidase activity ; structural molecule activity ; clathrin-dependent endocytosis of virus by host cell ; fusion of virus membrane with host endosome membrane ; induction by virus of host autophagy ; negative regulation of innate immune response ; proteolysis ; suppression by virus of host JAK-STAT cascade via inhibition of host TYK2 activity ; suppression by virus of host JAK-STAT cascade via inhibition of STAT1 activity ; suppression by virus of host JAK-STAT cascade via inhibition of STAT2 activity ; suppression by virus of host transcription ; suppression by virus of host type I interferon-mediated signaling pathway ; viral RNA genome replication ; virion attachment to host cell" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MIENQSDNIDNKENDLSDQDNALENVSSAQELTTENNELSSQKTEEINTEELKNSISNNDARLEQLEKEHETLKNQYVRISADFDNFRKRQSRDQDDLKIQLVSKTLTAILPIVDNFERARQQLKPESEEAQSLHRSYQGLYKQLVEVLKQQGVSPMRVVGQQFDPSLHEAVLREPSEKFEEDFIIEELQRGYHLEGKVLRHALVKVSMGPGKQNSQEEVEKDKVEGDIDSEENTSEDV", - "output": "cytoplasm ; adenyl-nucleotide exchange factor activity ; protein homodimerization activity ; protein-folding chaperone binding ; protein folding" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MQKAGLLLRGWTRAWKSVRMASSGLTRQNPLANKVALVTASTDGIGLAIARRLAEDGAHVVISSRKQQNVDRAVATLQGEGLSVTGVVCHVGKAEDREKLVNMALKLHQGIDILVSNAAVNPFFGNLMDVTEEVWNKVLSINVTASAMMIKAVVPAMEKRGGGSVVIVSSVAGFVLFPSLGPYNVSKTALLGLTKNFAAELAPKNIRVNCLAPGLIKTHFSSVLWKEKAREEMIKETMQIRRLGKPEDCVGIVSFLCSEDASYINGETVVVGGGTPSRL", - "output": "mitochondrion ; peroxisomal membrane ; peroxisome ; 3-keto sterol reductase activity ; alcohol dehydrogenase activity ; carbonyl reductase (NADPH) activity ; identical protein binding ; NADP-retinol dehydrogenase activity ; oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor ; retinal dehydrogenase activity ; alcohol metabolic process ; cellular ketone metabolic process ; positive regulation of reactive oxygen species metabolic process ; retinal metabolic process ; retinoid metabolic process ; steroid metabolic process" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MIPYATIEEASIALSRNLTWLETLWFDYSATKSDYYLYCHNILFLFLIFSLVPLPLVFIESSQSTSDLFNRYKIQPKVKNSFSSMFKCYKDVMKMFILVVGPLQLVSYPSIQMIEIRSGLPLPSCMEIVAQLVVYFLVEDYTNYWVHRFFHCKWGYEKFHHIHHEYTAPIGYAAPYAHWAEVLLLGIPTFLGPAIAPGHMITFWLWIALRQIEAIETHSGYDFPWSLTKYIPFYGGAEYHDYHHYVGGQSQSNFASVFTYCDYIYGTDKGYRFQKKLLQQMKEKSKKSNKLVNGGEKFD", - "output": "endoplasmic reticulum ; endoplasmic reticulum membrane ; C-4 methylsterol oxidase activity ; iron ion binding ; 4,4-dimethyl-9beta,19-cyclopropylsterol oxidation ; fatty acid homeostasis ; sterol biosynthetic process ; sterol homeostasis" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MDLPEPIRRRLGDFSRTVFVDQSRTQPSFEEHANFLDQNKDVVSSLPLQMSLYFNMWFFPFWWISEVVMLDLKYSALADYYKFILITILIVMTLIEAIRLYLGNAGNLQEKVPELAGFWLLTFLLQFPLILFQLFNEAVLVQPLERGVHIILALFIFAEVLFGFVALRTMVRHTESRFHLRQFHGIQELRT", - "output": "ciliary membrane ; ciliary transition zone ; MKS complex ; cilium assembly ; non-motile cilium assembly ; smoothened signaling pathway" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MSWLSKLMPSGIRTENTPAKKRSVPEGLWEKCSNCGSALYGPELEENLEVCPKCDHHMAIRARARLAALFDLDSPTTEIAAQLGPVDVLKFKDQKKYGERIKASQKSSGEYDALIAMRGMLKGNPLVAAAFDFAFMGGSMGSVVGERFARAAEVALEVGCPFVCFSASGGARMQEGLFSLMQMAKTSAALGRLREAGLPYISVLTHPTTGGVSASFAMLGDINIAEPHALIGFAGPRVIEQTVRETLPEGFQRSEFLLDHGAIDQICDRRDMRDRIAELTTMMMRQPHPQDADAA", - "output": "acetyl-CoA carboxylase complex ; acetyl-CoA carboxylase activity ; ATP binding ; carboxyl- or carbamoyltransferase activity ; zinc ion binding ; fatty acid biosynthetic process ; malonyl-CoA biosynthetic process" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MDRTEQKSIIEGLLFVSGDEGIYPEQIAKVLEIEGNEVIDILEEMQKECEGAHRGLQIVQYAKVYRFATKKEHASYYQKLIEIPTAASLSQAALETLAIVAYRQPITRTEMEEIRGVKTDKALQTLVSHLLIKEMGRAEGPGRPILYGTTKEFLDTFGLKTLDDLPPLSEENEQMNEADLFFGSLQEISK", - "output": "cytoplasm ; cell division ; chromosome separation ; DNA replication" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MAKVLAINAGSSSLKFQLFEMPAETVLTKGVVERIGFDDAIFTIVVNGEKHQEVTAIPDHAAAVKMLLDKLIRYGIIRSFDEIDGIGHRVVHGGEKFSDSVLITEDVIKQIEEVSELAPLHNPANLVGIRAFQEVLPDVPAVAVFDTAFHQTMPEQSFLYSLPYEYYTKFGIRKYGFHGTSHKYVTQRAAELLGRPIEQLRLISCHLGNGASIAAVEGGKSIDTSMGFTPLAGVAMGTRSGNIDPALIPYIMEKTGMTADEVIEVLNKKSGMLGLSGISSDLRDLEKAAAEGNERAELALEVFANRIHKYIGSYAARMCGVDAIIFTAGIGENSEVVRAKVLRGLEFMGVYWDPILNKVRGKEAFISYPHSPVKVLVIPTNEELMIARDVMRLANL", - "output": "cytoplasm ; acetate kinase activity ; ATP binding ; magnesium ion binding ; acetyl-CoA biosynthetic process ; organic acid metabolic process ; phosphorylation" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MFEYVTGYVEYVGPEYIVLDHNGIGYQIFTPNPYVFQRSKQEIRVYTYHYVREDIMALYGFKTREERLLFTKLLGVSGIGPKGALAILASGQTGQVVQAIENEDERFLVKFPGVGKKTARQMILDLKGKLADVVPDVFVDLFSDEERFDEKKGSSTELDEALEALRALGYAEREINRVLPELLKESLTTDQYIKKALSLLLNGKR", - "output": "cytoplasm ; Holliday junction helicase complex ; ATP binding ; DNA binding ; four-way junction helicase activity ; DNA recombination ; DNA repair ; SOS response" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MHPVLRQMRPQPRATTASAAVALSGSGEQEEPQCPTLELEEGEGIARLGAHSPERHPRVQLARDSRVAFVPRQNMFRDNSGEEAEEMRDCRFRAGRELRRGFNRERLLREEDFEPDEHSGISSARAHVSAANLVTAYEQTVTEERNFQKSFNNHVRTLIAREEVAIGLMHLWDFVEAYVHNPASKPLTAQLFLIVQHSRDNETFRDAMLNIAEPQGRWLLDLINILQSIVVQERSLSLADKVAAINYSMLSLGKFYARKIYKSPYVPIDKEVKIDSFYMRMALKVLTLSDDLGVYRNDRIHKAVSASRRRELSDKELMHSLQRALTGAGTEDESFFDMGADLRWQPSARALEAAGVASADVTGDDDDEDQYED", - "output": "host cell nucleus ; viral DNA genome packaging ; viral release from host cell" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MEQRIKFPRSEKVYLSGKLFPEIRVGMRKVEQVPSTTFEGEKKVITPNPHVYIYDTSGPFSDPDIEIDLKKGLPRLREEWILNRGDVEQLPEISSEYGRMRRDDGSLDHLRFEHIALPYRAKAGRHITQMAYAKQGIVTPEMEYVAIRENMNCEELGIETHITPEFVRQEIAEGRAVLPANINHPEAEPMIIGRNFLVKINTNIGNSATTSSIDEEVEKAMWSCKWGGDTLMDLSTGENIHETREWIIRNCPVPVGTVPIYQALEKVNGKVEDLTWELYRDTLIEQCEQGVDYFTIHAGIRRHNVHLAEKRLCGIVSRGGSIMSKWCLVHDRESFLYEHFDDICDILAQYDVAVSLGDGLRPGSTHDANDEAQFAELDTMGELVVRAWEKNVQAFIEGPGHVPMHKIRENMERQIEKCHNAPFYTLGPLVTDIAPGYDHITSAIGAAQIGWLGTAMLCYVTPKEHLALPDKEDVRVGVITYKIAAHAADLAKGHPGAQVRDNALSKARYEFRWKDQFDLSLDPERAFSYFHAGRHTDGEYCTMCGPNFCAMRLSRDLKKTQKQK", - "output": "4 iron, 4 sulfur cluster binding ; carbon-carbon lyase activity ; zinc ion binding ; thiamine biosynthetic process ; thiamine diphosphate biosynthetic process" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MSDKTLTRADLAESVYREVGLSRQESADLVQSVLAMVSDNLAAGQSVKLSSFGSFLLRDKRGRVGRNPKTGVEVPIDARRVLVFKPSQVLKERVDSALSKD", - "output": "DNA binding ; structural constituent of chromatin ; DNA recombination ; regulation of DNA-templated transcription ; regulation of translation" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MQYSTLAGQTDNSLVSNNFGFLRLPLNFMPYESHADWVITGVPYDMAVSGRSGARFGPEAIRRASVNLAWEHRRFPWTFDVRERLNIIDCGDLVFSFGDSRDFVEKMEAHAGKLLSSGKRCLSLGGDHFITLPLLRAHARYFGKLALIHFDAHTDTYDNGSEYDHGTMFYTAPKEGLIDPSRSVQIGIRTEHSKKLPFTVLSAPKVNEDSVEETVRKIKETVGNMPVYLTFDIDCLDPSFAPGTGTPVCGGLSSDRALKILRGLTDLDIVGMDVVEVAPSYDQSDITALAGATIALEMLYLQGAKKD", - "output": "agmatinase activity ; manganese ion binding ; putrescine biosynthetic process from arginine ; spermidine biosynthetic process" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MSTVKQRTRTEGKPQYPLMQSIKDTLKLKTTKRTNSEKKVSTLNDKSGSPIKSNSERRNGITRKVNGSKRLSAQRVALFKYNNVQVFNYVRNGNNSRKSSMSSLNSSGTVVMCNEYDSEVTNLKPQMLIGKGVLELYQIKTPAALDRKEQTMNYISLGRGGQIVHPILPKLKITKLRNENFKYLITFSNPERYWQIEFLQINGQLHDELLKITDEFESIISSVCIFIDENITKLASLKSNKTPPNNVNTLDQIKEKVQTATENDDDEAEELDYLLEDPIEQEPTSSFEYDVPTDLTEVFQRTMGRINSNGSRRYSSVPQFSHRRSMIRRSMSLFPEHEGRFS", - "output": "extrinsic component of intraperoxisomal membrane ; peroxisome inheritance" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MSPTAEIPKPVAVVGISAEFPSGTLSDANFDHQSFFDFLLSGKDAVERIPKDRFNIDGWQGSHLGQILPEDACFLKNVHLFDHFEFGISSKDALTMGAGTRKLVEHSFLALLDSGINCRSQNVAAFSSAVAFDLLSAADADEFEPRDGFGGGAAAVANRISYQLDLLGPSIPVDTACSSSLMALHLGVQSLRAGECEAAVIGGSQINHRFLDWIFYSQLSILSPGGKSIPFDSSADGFGRGEAVVVLVVKLLEDAIRDGDKIYATVLNTAVNSTGSAGPVKTPIAESQAAAMLTAYKGIGRSPSEADFIECHATGTSVGDPVEANWVGNHFKRDSELLIGSVKGNVGHTEITSFLTSFSKVISMFDTNRIPPQANFKEPNPAIHWEEYNMRTPTQIEGFTTRNPSGKRLASINASGLLGANGHVIAESPPPKAAKPSALPTGMPVLLMAAGLSPRSTTAIAADLSKLASEIPDELPILSNIFGRRARQLTWRAAAISTSDGPFVFPAPRFVPRGTPQLVFVFSGQGPQHIEMGRQLFKYYPVFRDSILKMDKVHVELTGKSIVKDLGFFGETRSSTALPDVWPVGLTVPSIAMIQMALVDLLAAFGIRPNLVFGHSAGEAAMSYTSGALPQELAMEIAVRRSQAMSIVEGSGGMAAVSCAPSVAREIVQEVLDEAGPDSGVLEIGCFNAPEAFTISGTHALLDKAVAIASGRGLFARKIKARVPGHCTLMEPCKERYVEQMEVAFSRYPGAHVPVVPTFSTQTGARWESEFTPEYMWNNGRVPVQFEQTVTAVVQEMPEAIFVEIGPHPALSSYISGMGAKPDKVVCPMRRVKNVTGFNEIFELLTAVGNLSTLGVNTINFHAVNATDCLEISKPIPAYPFAPKTMPFYSESSELAVKMKRSRKGPLNYDTLAVNALTHPDLAEHVIKGEPILPATGFFEMIFEEGARTIWDIELRSLLPLLPEKVLNVNVKSDGHAWSIVSSSGGRNPRLHATGFMTTEVMDKDAGPIDLAAIRARTTPADISNLYAILNNTAAFGPLYRRIEACYEGDHEILYQVRGNAPELTAHYNYVFHPSLLDSCIHGLLHPVFTGNADKSVFYLPSHIGRVTLYDRAIEEAVPETLYSYVVPHDWTPDSIACDAFIVNERGERLVTLIDCVLSKHWTGAVPTRPDTSYEYIYQPLGLPAAELVKSEAQQQDYAFLDAIVAHADEKVAPPSANGHANGHANGSANGSAVGTVGEDRKVFEEIVQSIASDELELKASSILGLFSASLDAPVAAVRQILDHAAKSGKQVVRILDIGDATASLYKQINAFASEYPSLRVDYTACGHEHATLDLRLASYNVDNVSKQAGLSPSTYDVIIETHTLGFAAELDRSLEYLHGLLLPGGFLVALEANGSAQASGGKWIDQVFSPQGRWSGLRSGKQHHRLSQSEWSGQLQKAKFQVVDGAQDAENTLFLTLLAQKHSLSTVSASSAASSAKVEEPAVFSFDHSRVLDLQKTVLASMSSGASNTKLWIESTTGTFDGAVATGFARSLMRELVAVDVRLVLFDPAWKAESRIPAIRQLSTLPSLESEIVLDASGVVMVPRLRSYAPRAPDSLDTTKYWVVDETKTVVQPAQPLPGPHQVLVKISSLSEAEGGLRGIVGTVARSGSSQWPVGAHVVTVAPSALSNFTLVHEGQLAQAPQTADEHSTAKVALLLVFAALGLRLDSRPLQSLQQIKVVVIHTGTVASSLARLLEYLGVKPVLVAPSLPLLLPRLSPGDVIIGGLSAAFARTVPRINGVSVFNWEDPEQGALAAVAQNPWLVGTTVDAHLARALPQVSVEGSSLTPDQLLPSDFSVSQSLALADDKTYLVLGGIGSLGLQIAIWMYQKGARHIVLTSRTGVSRLAGTKNRSLRGAVEYLKTLPDLELRLEPCDASSEESLSKLISSLDRPLAGAMLTAAVMADGLFLKQSADTYPIPFKPKTDAYFAFEKVVDIKKLDFLLAVSSVAGFGAAGQTNYASANTGIEYLTARYPNAWSFVAPGIADSNVGFDLFTSTNSHLEQWESSTMNSYEICLCLEDGLLRMANNERISIYVPNLNWDAISQSVSESVLYNHLVKLDAATDELEVEDPYEVLQEIVLKFVDASEEEFERNVPLTSYGLDSLSAARMSTALKPYLAITQIQLLGDLSLDDLVEKMQATKHVAVEETAVSTAEKPFAWDAMHQPGQTILKFNIGSGTPLIILHGGAGDTAAFRAIQEQFSTPLWAIQPTPEAPLDTVDTLAQFYFEKIKEARPAGPYRIAGFSASSMVTLRLAQLLEANEDEIAQLTFVDHFPLFFTSAIHGFTEDHKTFEDLTAYGRKASVALVAECCRRDTATARRLYGENLVAASNGQPSATNAMESWEWIQKTTRMNLKQVVDFGGGWEAWASSDATTRMEAARRRMVEEIAKVKAPMNVMIANWGIRALINSEWTDLGISRGGREVRTQYYDAGHFDIFEKPDFSRNLEFDWVDPHPVHQLATMIHNPAMNDLRALFKILDTKALQVMADTISQNPVVGSEISRQRLFEVCKEFVRTQKHSTWTDEEYEHSKALFPTYFETTERISKVHPSIMESPAAAVGALYSDDMIDGFYRQNKVFTSMNQEAAKTFKALVSSPDFGKQRPIRVLEVGAGVGGLTKFLVEALCDMPNADVEYTVTDLSYTLASSLAESFSYKNMVAKMYDLSKKPSEQGLQLGHYDVITGLNVIHAVPDLNATLTDLHSLLAPGGRILIVDTDGTARTSNPPRPGAIWNDFIWGSFQGWFGYTDDRTHCTIDEDEWRKRLTATGYSNVQVCHEDAGTCILFEAEKV", - "output": "3-oxoacyl- synthase activity ; methyltransferase activity ; oxidoreductase activity ; phosphatidylinositol phospholipase C activity ; fatty acid biosynthetic process ; intracellular signal transduction ; methylation" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MFEQRVNSDVLTVSTVNSQAQVTQKPLRDSVKQALKNYFAQLNGQDVSDLYELVLAEVEQPLLDMVMQYTRGNQTRAALMMGINRGTLRKKLKKYGMN", - "output": "DNA-binding transcription factor activity ; sequence-specific DNA binding" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MNREEQLGILESLLFAAGDAGLSTEQLTEVMEITHIEALNLLELLSERYNGSADRGLILLELAGTFQLATKKAHADYLRKLVEVPSNTVLSQASLETLAIIAYRQPVTRMEVDEVRGVQTDGPIRTLVAKGLVTDKGRVDGAGRAKLYVTTSEFLDAFGLNSLEDLPKLADPAAEEPDQNEMDLFFDRFNQSKEQEEE", - "output": "cytoplasm ; cell division ; chromosome separation ; DNA replication" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MSDRHLYGSDHSYLSSKPSCSSCRRQSSTSQKNECMTNPGSIVLTQRWTVCNFESLLKLSRPGSCLRSTVFKDDAVPDACWQLCLYPGGKREENANNVSLFLKMSATSPSKEVVLKAEYRFYFLDDNDEPKFSNVNVGEFHAKPPKGGHSWGLRNIPTQKVQNSIRQDKSLVISCHIELIPDASKVPCKRVPITPSIEMPFAQIPRAHVESELEMLASGDGTDMTIVAGPLDGEREQFRVHAYKLRAHSDVFQMMLSHTEMRENQEKRIEILDFSPTSVRAMVEFIYAGVIKSDIDVYQAVDVMQIAEKYQILALKMTCEQHLLDRLNVNNVLECITHAERYNTDVLYDACVDFAIHNRQHVMALTSWRNFISDEPVLASNLLEKMVKSNDNSSPPVKKPRV", - "output": "cytoplasm ; nucleus ; ubiquitin protein ligase binding ; proteasome-mediated ubiquitin-dependent protein catabolic process ; protein ubiquitination ; regulation of proteolysis" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MARVTVQDAVEKIGNRFDLVLVAARRARQMQVGGKDPLVPEENDKTTVIALREIEEGLINNQILDVRERQEQQEQEAAELQAVTAIAEGRR", - "output": "DNA-directed RNA polymerase complex ; DNA binding ; DNA-directed 5'-3' RNA polymerase activity ; DNA-templated transcription" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MNPKCSLILLSGGKGERFGANQPKQYLPFQGQPLILHALNSALLIPEINEIIVVCDASYEHIFEGYSVKFAPAGMRRQDSVFSGLHHVTNPWVLVHDGVRPFIYPDEVSELIVIAQQTGAATLVSNVPYTIKQRNPVKTLDRDSLSIVHTPQCIKTEILLEGLELADREQITLVDDTQAAELLGIPVSLVSNKHPQIKITYPEDLTIAHALL", - "output": "2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity ; isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway ; terpenoid biosynthetic process" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MSDSRLLPTGSSPLEVAAAKACAEIEKTPVSIRELWNPDTCPANLLPWLAWAFSVDRWDEKWPEATKRAVIRDAYFIHCHKGTIGAIRRVVEPLGYLINVTEWWENSDPPGTFRLDIGVLESGITEAMYQEMERLIADAKPASRHLIGLNITRDIPGYLFAGGVAYDGDVITVYPG", - "output": "virus tail, baseplate ; viral tail assembly" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MLKRKLGPEDLRRLETPAIERESHGQTSAKSSVPDSASTVAVDFAGVTKSYGNKIVVDELSFSVASGECFGLLGPNGAGKSTIARMLLGMTCPDAGTITVLGVPVPARARLARRGIGVVPQFDNLDQEFTVRENLLVFGRYFGMSTRQSEAVIPSLLEFARLERKADARVSELSGGMKRCLTMARALINDPQLIVMDEPTTGLDPHARHLIWERLRALLARGKTIILTTHFMEEAERLCDRLCVLEKGRNIAEGGPQALIDEHIGCQVMEIYGGDPHELLSLVKPHSQRIEVSGETLYCYAPDPDQVRTQLQGRAGLRLLLRPANLEDVFLRLTGREMEE", - "output": "plasma membrane ; ATP binding ; ATP hydrolysis activity ; transmembrane transporter activity" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MATNVGGAVDNSRRSISDNRHDPEKPAELPDTLSGSETERPQDANPEAALDQQASDAAKAHDEGPPDGGTAAWMVVLGAWCCSFCSPGWINSMGSFQEYYQREPLKDYSSSEIAWIPSLEIFFLFGLGPIVGIIFDRYGPRPLIIGGTIFHVFGLMMASLAKTYYQFLLSQGVCSAIGVACLYSPALACISTWFLKRRGAAMGIMATGSSVGGVIFPIMITRMIERNGYPWALRTAAFLILGLQVIACLTVRPRQKPVPKKLPAGRLAAPFTEPAFALLLAGIFILTYGMYIPIDYLPLSGLQEAHMSVNMSQYLVAIMNAASLFGRLGAGYGADIIGRWNMFIIACGVTGISNLAVWIPATKSSITIGYAIMFGFASGAFVSLVGALPVSVSPIPELGYRMGIVFLVISIPALTMAPIGGAILQHASNGWVSLKVFAGVMCLVGSAIILGSRMLYTEKRLIKAF", - "output": "plasma membrane ; transmembrane transporter activity" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MTRMRVHELAKELNMDNKDLIDRILKLGIQVKNHMSTLTDSAVLKIRQQFSEAKTETVEEKRIGRAVIRRRKKLTEGESAAAPAEGEERVASEALPVEAEMPAQPVEAPELIAEPISKLPPEVGVAQPQLPEEPEPAPEPLIPAVKPEEAAASELAVEPQTVVPPVAAPAAEVKPARPPMEAPAPARKPPEEKETKVKHAEPESLAEPLPSPAPVELTLVPAESAAGQVAERTDEEEEEDDKARPKKAKKRRRKKVRKDEPARIIKLPEIIPEEPEEEAVLPAHLATRIQVKTEEVEVKEAPRKKRPRPEEFEKEAAERKAKGTRRKEVFEREDLYSKQEIAAQDDRGRLKGDKRRPFAKEPARPEIAVVKPGKRKIRVDEAITVANLAKQMGIKATELIKKLLLLGLPANINQAVDFDTAALLASEFEFEVEKTGFEEEELLQVREDRVEDLIRRPPVITVMGHVDHGKTSLLDAIRDTNVIGGEAGGITQHIGAYYVMLPNGNVVFLDTPGHEAFTSMRARGAKVTDIVILVVAADDGVMQQTIEAINHAKAAEVPIIVAINKVDKPNANIDRVKRELAEHGLIPEEWGGNVTMVGISAKKRTGIEELLEMVLLQAELLELKANPAKPARGRVIEAKLDKGRGPVATILIQEGTLRTGDVYLCGVNSGRVRNMFSDRGQRLDEAGPSMPVEVLGLSGVPNAGDDFITLPDERQAKMIAEHRLVKLREKELSRTSKVTLESLFEQIQEGEIKELNLILKADVHGSLEAITDSLLKLSTPEVKVSLIHFGTGAVIETDVMLASASNAIVIGFNVRSETKVQELADQENVDVRYYDVIYQLLSDVKDAMVGMLEPVFKENVIGRAEVRQTFQVPKIGMIAGSFVLEGRVERNAKCRVLRDHVVTYDGKISSLRRFKDDAKEVKAGFECGIGVENFNDIKVGDILEVYELQEMKPVLESPPGDK", - "output": "cytoplasm ; GTP binding ; GTPase activity ; translation initiation factor activity" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MEMKPKYDPREVEAGRYEEWVKNGYFKPSEDKSKETYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAGIATQAKVEAKLNEQGITRYDLGREKFLEQAWDWKEEYASFIRAQWAKLGLGLDYSRERFTLDEGLSKAVKKVFVDLYNKGIIYRGERIINWDPKARTALSDIEVIHEDVQGAFYHFKYPYADGEGFIEIATTRPETMLGDTAIVVNPNDERYKDVIGKTVILPIVGRELPILADEYVDIDFGSGAMKVTPAHDPNDFEIGQRHQLENIIVMDENGKMNDKAGKYEGMDRFDCRKQLVKDLKEQDLVIKIEDHVHSVGHSERSGAVVEPYLSTQWFVRMEDLAKRSLDNQKTDDRIDFYPQRFEHTFNQWMENIRDWTISRQLWWGHQIPAWYHKETGEIYVGEEAPTDIENWQQDEDVLDTWFSSALWPFSTLGWPDLESEDFKRYYPTNALVTGYDIIFFWVARMIFQGLEFTDRRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVIDEYGADSLRYFLATGSSPGHDLRYSTEKVESVWNFINKIWNGARFSLMNIGEDFKVEDIDLSGNLSLADKWILTRLNETIATVTDLSDKYEFGEVGRALYNFIWDDFCDWYIEMSKIPMNSNDEEQKQVTRSVLSYTLDNIMRMLHPFMPFVTEKIWQSLPHEGDTIVKASWPEVRESLIFEESKQTMQQLVEIIKSVRQSRVEVNTPLSKEIPILIQAKDKEIETTLSQNKDYLIKFCNPSTLNISTDVEIPEKAMTSVVIAGKVVLPLEGLIDMDKEISRLEKELAKLQSELDRVDKKLSNENFVSKAPEKVINEEKRKKQDYQEKYDGVKARIEQLKA", - "output": "cytoplasm ; aminoacyl-tRNA editing activity ; ATP binding ; valine-tRNA ligase activity ; valyl-tRNA aminoacylation" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MQIVRNVPDLRAARAALTDGGRARLALVPTMGALHEGHLSLVRAAREAGHVVAASIFVNPTQFGPNEDFTRYPRDPERDCALLAEAGCALAWLPEVSTMYPPGDATSVEVAGLSVVLEGAVRPGHYRGVATVVVKLLGQVRPDAAYFGEKDWQQVQVIRRVAADLFLPVEIVVGPTLREKDGLAMSSRNRYLDPADRARAPLLHQVLRRVRAALRDGEPAAAALAAGRRALAEGGFIVDYLELVDAGTLAPLTAPDDGARLLAAARLGTTRLLDTVAV", - "output": "cytoplasm ; ATP binding ; pantoate-beta-alanine ligase activity ; pantothenate biosynthetic process" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MVEKKPAVRSQDPGQRRVLDRAARQRRINRQLEALENDNFQDDPHAGLPQLGKRLPQFDDDADTGKKKKKTRGDHFKLRFRKNFQALLEEQNLSASEGPNYLTACAGPPSRPQRPFCAVCGFPSPYTCVSCGARYCTVRCLGTHQETRCLKWTV", - "output": "nucleoplasm ; nucleosome ; nucleus ; Swr1 complex ; chromatin binding ; histone binding ; histone deacetylase binding ; metal ion binding ; nucleosome binding ; calcium ion homeostasis ; chromatin remodeling ; heart process ; hematopoietic stem cell homeostasis ; intestinal stem cell homeostasis ; muscle cell differentiation ; negative regulation of G0 to G1 transition ; negative regulation of transcription by RNA polymerase II ; positive regulation of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator ; positive regulation of lymphoid progenitor cell differentiation ; positive regulation of transcription initiation by RNA polymerase II ; regulation of DNA-templated transcription ; regulation of histone deacetylation ; regulation of T cell proliferation ; transcription initiation-coupled chromatin remodeling" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MEVPTLSKTRKPPDLNEESLDLGIMIALFEIGSIPPVSCSSLPSLKSSDHEATEQRIAKKFESLLKEIKDIVKHVTSYEQKVTETKEPFKETNMFEVSELREKIIELDEINKELVKKLLASLDLGKKENAKKQEMRLDNQNSEDTVQDCSGDLVNCSKGQKALPETQLSKEKAKHGFPHIQEENIRLRNNMERLLQEAEHWSVEHTELSKLIKSYQKSQNDIKTLKNNGTHSPTQTNNESAKQELEEQVKRLKEDTYSLHLIATLLENECQILEQRVELLDELHHQKEEPLQGEPMQINHEQSDKEQKLPEAEKVKIHEKNMPEVEGTFHKRDQFFTSLDICHNKKAHNNQFNTRIAKRALVVKRPASSLS", - "output": "cytoplasm ; nucleus ; DNA binding ; DNA-binding transcription factor activity" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MAAQAAAAAQAAAAAQAAAAQAAQAEAAESWYLALLGFAEHFRTSSPPKIRLCVHCLQAVFPFKPPQRIEARTHLQLGSVLYHHTKNSEQARSHLEKAWLISQQIPQFEDVKFEAASLLSELYCQENSVDAAKPLLRKAIQISQQTPYWHCRLLFQLAQLHTLEKDLVSACDLLGVGAEYARVVGSEYTRALFLLSKGMLLLMERKLQEVHPLLTLCGQIVENWQGNPIQKESLRVFFLVLQVTHYLDAGQVKSVKPCLKQLQQCIQTISTLHDDEILPSNPADLFHWLPKEHMCVLVYLVTVMHSMQAGYLEKAQKYTDKALMQLEKLKMLDCSPILSSFQVILLEHIIMCRLVTGHKATALQEISQVCQLCQQSPRLFSNHAAQLHTLLGLYCVSVNCMDNAEAQFTTALRLTNHQELWAFIVTNLASVYIREGNRHQEVLYSLLERINPDHSFPVSSHCLRAAAFYVRGLFSFFQGRYNEAKRFLRETLKMSNAEDLNRLTACSLVLLGHIFYVLGNHRESNNMVVPAMQLASKIPDMSVQLWSSALLRDLNKACGNAMDAHEAAQMHQNFSQQLLQDHIEACSLPEHNLITWTDGPPPVQFQAQNGPNTSLASLL", - "output": "chromatin ; nuclear body ; nucleoplasm ; nucleus ; Scc2-Scc4 cohesin loading complex ; SMC loading complex ; cohesin loader activity ; double-stranded DNA binding ; cell division ; maintenance of mitotic sister chromatid cohesion ; mitotic sister chromatid cohesion" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MRYLPLTPEDRAQMLGVIGAPDVDALFADVPAAARNPAIGLAPHAGELEVERELSGLAALNRAAGAGPFFCGAGAYRHHVPATVDHIIQRSEFLTSYTPYQPEIAQGTLQVLFEFQTQVARLTGLDVANASMYDGSTACAEAVMMAQRVTRREKAILSGGLHPHYAATTQTIAHAEGMEIVRQPAAIDAEAAVIEAIDAETACVVVQTPNVFGVVTDVSKIAEAAHAKGALLIVVTTEAVAYGLLKSPGEMGADIAVAEGQSIGNALNYGGPYVGLFACREKFVRNMPGRLCGETVDAEGRRGYVLTLSTREQHIRREKATSNICTNSGLCALAFSIHLSLLGGKGLSQLARVNHARARELKAAVEAAGLEVLTPRFFNEIAVRTKGPAADLVERLLADGVVAGVPFSRLDPGAGLDDVLLLCATETTTSDDIAALKDALAR", - "output": "glycine dehydrogenase (decarboxylating) activity ; glycine decarboxylation via glycine cleavage system ; nucleoside metabolic process" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MELKEYLDYLVEFIKETVKKANAKGVVIGISGGIDSAVVACLAKKAFPNDYTAVWMPIESSDEDYKCKQELIDQCGIKAIDVELKETFLSFKKAIKDSTTPEHKLAIANAKARLRMTTLYTVAQTNSYLVLGTDNLDEWHIGYFTKFGDGGVDMVPLVHLLKREVREAARILGVPTSIINRAPTASLWEDQTDESELGITYDQIDAYLAGEINDENVKSRVDHLHKISEHKRNGAVAPKEFKRK", - "output": "cytoplasm ; ATP binding ; glutaminase activity ; metal ion binding ; NAD+ synthase (glutamine-hydrolyzing) activity ; NAD+ synthase activity ; NAD biosynthetic process" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MTQIGTPLSPTATRVLFCGSGELGKEVVIELQRLGVEVIAVDRYENAPAMQVAHRSHVINMLDGAALRAVIEAEKPHFIVPEIEAIATATLVELEAEGFTVIPTARAAQLTMNREGIRRLAAEELKLPTSPYHFADTFEAYSKAVEDLGFPCVVKPVMSSSGKGQSLLKSTDDVQKAWDYAQEGGRAGKGRVIVEGFIDFDYEITLLTVRHIGGTTFCAPVGHRQEKGDYQESWQPQAMSPVALAESERVAKAVTEALGGRGMFGVELFIKGDQVWFSEVSPRPHDTGLVTLISQDLSQFALHARAILGLPIPLIRQFGPSASAVILVEGQSTQTAFANLGAALAEPDTALRLFGKPEVNGQRRMGVALARDESIEAARAKATRASQAVNVEL", - "output": "ATP binding ; ligase activity ; magnesium ion binding ; phosphoribosylglycinamide formyltransferase 2 activity ; phosphoribosylglycinamide formyltransferase activity ; 'de novo' IMP biosynthetic process" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MLRFAVIGHKAVSTPDFSLNDMPGGAGRMDVLCRCINASFFLSHDLRRDTECFLILKGGEQADPANTVTLRFSGEKIKSLNPDERSAGALIKKALVTIPEEEYQRAAPGISIRKSGLAKLLEEHPFAVLDENGEDIRTAETLPENFILSDHQNFTEEEMELIKDLPKYSVGPRVLHADHTIIIILNEFDRRGEQA", - "output": "cytoplasm ; S-adenosylmethionine-dependent methyltransferase activity ; tRNA methyltransferase activity" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MSASAAVSSTCAAASSTTSRRSSSSPASRVQATPRRSLPSRLVASRTSPRSPVVPPVYATASPGGAGGTTAAAARKKLLIFDAEEYLAESLAKYTARLSGEAVAERGAFTVALSGGSLIKALRKLTESPYLEAVEWSKWHVFWVDERVVPKDHADSNYKLAMDGLLSKVPIPASQIYAINDTLSAEGAADEYETCLKQLVNDGVVAISEVTGFPKLDLMLLGMGPDGHVASLFPGHPVVNENLKWVSYIKDSPKPPPERITFTFPLVNSSAHIALVVTGAGKAGAVHKAFSDKQSSSDLLPVEMVSQQEGVLTWFTDKPAVSMLSSI", - "output": "chloroplast ; 6-phosphogluconolactonase activity ; carbohydrate metabolic process ; pentose-phosphate shunt" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "GSSGLISMPRV", - "output": "extracellular region ; neuropeptide signaling pathway" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MAGAIENARKEIKRISLEDHAESEYGAIYSVSGPVVIAENMIGCAMYELVKVGHDNLVGEVIRIDGDKATIQVYEETAGLTVGDPVLRTGKPLSVELGPGLMETIYDGIQRPLKAIKEESQSIYIPRGIDTPALDRTIKWQFTPGKFQVGDHISGGDIYGSVFENSLISSHKILLPPRSRGTITWIAPAGEYTLDEKILEVEFDGKKSDFTLYHTWPVRVPRPVTEKLSADYPLLTGQRVLDALFPCVQGGTTCIPGAFGCGKTVISQSLSKYSNSDAIIYVGCFAKGTNVLMADGSIECIENIEVGNKVMGKDGRPREVIKLPRGRETMYSVVQKSQHRAHKSDSSREVPELLKFTCNATHELVVRTPRSVRRLSRTIKGVEYFEVITFEMGQKKAPDGRIVELVKEVSKSYPISEGPERANELVESYRKASNKAYFEWTIEARDLSLLGSHVRKATYQTYAPILYENDHFFDYMQKSKFHLTIEGPKVLAYLLGLWIGDGLSDRATFSVDSRDTSLMERVTEYAEKLNLCAEYKDRKEPQVAKTVNLYSKVVRGNGIRNNLNTENPLWDAIVGLGFLKDGVKNIPSFLSTDNIGTRETFLAGLIDSDGYVTDEHGIKATIKTIHTSVRDGLVSLARSLGLVVSVNAEPAKVDMNGTKHKISYAIYMSGGDVLLNVLSKCAGSKKFRPAPAAAFARECRGFYFELQELKEDDYYGITLSDDSDHQFLLANQVVVHNCGERGNEMAEVLMEFPELYTEMSGTKEPIMKRTTLVANTSNMPVAAREASIYTGITLAEYFRDQGKNVSMIADSSSRWAEALREISGRLGEMPADQGFPAYLGAKLASFYERAGKAVALGSPDRTGSVSIVAAVSPAGGDFSDPVTTATLGITQVFWGLDKKLAQRKHFPSINTSVSYSKYTNVLNKFYDSNYPEFPVLRDRMKEILSNAEELEQVVQLVGKSALSDSDKITLDVATLIKEDFLQQNGYSTYDAFCPIWKTFDMMRAFISYHDEAQKAVANGANWSKLADSTGDVKHAVSSSKFFEPSRGEKEVHGEFEKLLSTMQERFAESTD", - "output": "endomembrane system ; fungal-type vacuole membrane ; proton-transporting V-type ATPase complex ; vacuolar proton-transporting V-type ATPase complex ; vacuolar proton-transporting V-type ATPase, V1 domain ; ATP binding ; DNA binding ; endonuclease activity ; mRNA binding ; proton-transporting ATP synthase activity, rotational mechanism ; proton-transporting ATPase activity, rotational mechanism ; endosomal lumen acidification ; Golgi lumen acidification ; intein-mediated protein splicing ; intron homing ; protein metabolic process ; proton transmembrane transport ; vacuolar acidification" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MAMFSHRLRRIVVAAPSYFQRFSTLSRPSDFTPVPSLLPRSVVKQSTAINRSPARLFSTTQYQYDPYTGEDSFMPDNEGCDFNHWLITMNFPKDNLPSREEMISIFEQTCAKGLAISLEEAKKKIYAICTTSYQGFQATMTIGEVEKFRDLPGVQYIIPDSYIDVENKVYGGDKYENGVITPGPVPVPTKEGFDSLKKESKPEQEEAEIILTPPDEGKTSGQVQGQGSLTLPDQRSVKERQGTLALVQGQGQRSGMSILGQGQGEGRRMSIPGQWQSRGQGNSFQGSFKQSQGTLPVRKGQTQISDEIPSFQGNVKQRQEMPIHGQGQAQRSQMPSSQGTLRQGQAQGSQRPSNQVGYNQGQGAQTPPYHQGQGAQTPPYQESPNNYGQGAFVQYNQGPPQGNVVQTTQEKYNQMGQGNYAPQSGGNYSPAQGAGSPRFGYGQGQGGQLLSPYRGNYNQGQGTPLPGQGQEGQPSYQMGFSQGLGAPVPPNQVIPGNYGQWAFVNYNQGPPQGNFLQGPQQNHNQGGQWNYSPQNGGHYGPAQFGQWYPGPPQGQGIQWPQYQLSYNQGQGTPFSGQCRCPNCGMTSYQGYNNQGQGTHIPEQWEGQDYAVLSYQASYNQAHGAQAPPYHGNYNQATPGGYGQGTSANFNQRFPVNPANYNMQNGGNYGPPHGLAGNPGFRQGFSGQGQNQTFQQDDQRNVAGDLRNNNPVDPTETRKPNSRI", - "output": "mitochondrion ; plastid ; protein dimerization activity ; cytidine to uridine editing ; mitochondrial mRNA modification ; mRNA processing" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MKILLAIALMLSTVMWVSTQQPQRVHTYCGRHLARTLADLCWEAGVDKRSGAQFASYGSAWLMPYSEGRGKRGIVDECCLRPCSVDVLLSYC", - "output": "extracellular space ; growth factor activity ; hormone activity" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MAHPSGSGGTSFAPTPTHPHHLSRETSRDELEMAESLRLLNQTHDHQKPRAEATSQEQQQQQQQQQQQQQQQQQQQQQQHAQEDPRSEIYHSLEDAVPIADGPPTPSTAASLQIPNMNYETPNASITGQVCSNCKTTQTPLWRRSPAGETVCNACGLYMKARNQSRPVNLKRNTQTQPTMSVQQSPTPGSTDGSRTCAGNVAGSPRVATYVAADQMAAGTCPGGGRCNGTGGQQGCSGCPAFNNRVSKTAKFALAQANAAPGENRGGSDAASSTSAASASTSAIPACQNCGTTITPLWRRDDAGHIICNACGLYYKLHGTHRPVAMKKQEIKRRKRIVPAADTSSQAPSSVANYSPPQRPSQTPAFEHSVSPDPSTALESREAYTPEPPRGPIAVDFTHYYSNSSVTSNPVALTPTVQPSAPSPRKRSRSATLDPEEPVNPLPHRPNAISAILNPSQTEVDANIDPSLSVPLRTSGGTSPNFTLSPEEKAAKRERLKREAEAMRLELERRQKELEELEND", - "output": "nucleus ; DNA-binding transcription factor activity ; sequence-specific DNA binding ; zinc ion binding ; regulation of transcription by RNA polymerase II" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MDGIKYAVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHRLPGKGRRMGPIMGQTMHYRRMIITLQPGYSIPPLRKKRT", - "output": "chloroplast ; ribonucleoprotein complex ; ribosome ; mRNA binding ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MDTFESVKAVVVEQLSVDANEVKPESRFIEDLNADSLDVVELVMALEEKFSIEIPDEEAEKIKTVKDVVAYIEANK", - "output": "cytoplasm ; acyl carrier activity" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MAKRDYYEILGVSKNATKEEIKKAYRKLSKKYHPDINKEPDAAEKFKEIKEAYEVLSDDQKRAHYDQFGHADPNQGFGGFRSDDFDFGGFSGFSGFDDIFSTFFGGGRRRDPNAPRAGADLQYTMTLTFEEAVFGKETDIEIPREETCNTCHGTGAKPGTKKETCSYCHGTGQISTEQSTPFGRIVNRRTCPYCGGTGQYIKERCTTCGGTGRVKRRKKIHVKIPAGIDDGQQLRVAGQGEPGINGGPPGDLYIVFHVEPHEFFERDGDDIYCEIPLTFAQAALGDEIEVPTLHGKVRLKIPAGTQTGTKFRLKGKGVPNVRGYGYGDQHVIVRVVTPTKLTEKQKQLLREFDQLGGSSMHQGPHGRFFEKVKKAFKGES", - "output": "cytoplasm ; ATP binding ; heat shock protein binding ; unfolded protein binding ; zinc ion binding ; DNA replication ; protein folding ; response to heat" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MNPTFILAALCLGIASATLTFNHSLEAQWTKWKAMHNRLYGMNEEGWRRAVWEKNMKMIELHNQEYSQGKHSFTMAMNTFGDMTSEEFRQVMNGFQNRKPRKGKVFQEPLFYEAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVADNGGLDSEESYPYEATEESCKYNPEYSVANDTGFVDIPKQEKALMKAVATVGPISVAIDAGHESFMFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNSKYWLVKNSWGEEWGMGGYIKMAKDRRNHCGIASAASYPTV", - "output": "apical plasma membrane ; chromaffin granule ; extracellular space ; lysosome ; cysteine-type endopeptidase activity ; antigen processing and presentation of peptide antigen ; CD4-positive, alpha-beta T cell lineage commitment ; collagen catabolic process ; elastin catabolic process ; enkephalin processing ; protein autoprocessing ; viral entry into host cell ; zymogen activation" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MNNYETVFILTPVLSDAQMKEAVDKFTGLLKQEGAVIVNEENWGLRKLAYPIQKKSTGFYQLVEFQANPDVIAKLETNFRRDERVIRFLTFRQDKFAAEYAAKRRSLKAKTEEVKEA", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MKLTLNRILFSGLALSILFTLTGCVGRDAHGNPKGMIWEFLGKPMSYFIDYFANNAGLGYGLAIIIVTIIVRTLILPLGLYQSWKASYQSEKMAFLKPVFEPINKRIKQANSQEEKMAAQTELMAAQRAHGINPLGGIGCLPLLIQMPFFSAMYFAAQYTKGVSTSTFMGIDLGSRSLVLTAIIAALYFFQSWLSMMAVSEEQREQMKTMMYTMPIMMIFMSFSLPAGVGLYWLVGGFFSIIQQLITTYLLKPRLHKQIKEEYAKNPPKAYQSTSSRKDVTPSQNMEQANLPKKIKSNRNAGKQRKR", - "output": "plasma membrane ; membrane insertase activity ; protein transport" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MSDSLRIIFAGTPDFAARHLDALLTSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVFQPVSLRPQENQQLVADLHADVMVVVAYGLILPKAVLDMPRLGCINVHGSLLPRWRGAAPIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLACPITAEDTSGSLYNKLAELGPQGLITTLKQLADGTAAPEAQNEALVTHAEKLSKEEARIDWSLSAVQLERCIRAFNPWPMSWLEIDGQPVKVWQASVIEDATQSLPGTILAATKQGIQVATGKGILNLLSLQPAGKKAMSAQDLLNSRREWFIPGNRLA", - "output": "methionyl-tRNA formyltransferase activity" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MSVLVKEVIEKLRLDIVYGEPELLEKEINTADITRPGLEMTGYFDYYTPERIQLLGMKEWSYLISMPSNSRYEVLKKMFLPETPAVIVARGLVVPEEMLKAARECKIAILTSRAATSRLSGKLSSYLDSRLAERTSVHGVLMDIYGMGVLIQGDSGIGKSETGLELVKRGHRLVADDRVDIFAKDEITLWGEPAEILKHLIEIRGVGIIDVMSLYGASAVKDSSQVQLAVYLENYDTHKTFDRLGNNAEELEVSGVAIPRIRIPVKTGRNISVVIEAAAMNYRAKEMGFDATRLFDERLTSLIARNEVQNA", - "output": "ATP binding ; magnesium ion binding ; phosphorelay sensor kinase activity ; protein serine/threonine kinase activity ; protein serine/threonine/tyrosine kinase activity ; carbohydrate metabolic process ; regulation of carbohydrate metabolic process" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MIAIIDYGMGNIRSVEQALKYIGAEYIVTSNKKEILRSDGVILPGVGAFPKAMDVLEERDLVCVLKEVCDIGKPLLGICLGMQLLFERSEELKDCSGLGLLPGEIRKLKVSYKIPHMGWNELRKEREFPLWNGLVDGSFVYYVHSYYADCPDEIVCGVSDYGMQVPGFVAKGNVFGAQFHPEKSGEIGMQILKNFQGVVEAWKSSQLSI", - "output": "cytoplasm ; glutaminase activity ; imidazoleglycerol-phosphate synthase activity ; lyase activity ; glutamine metabolic process ; histidine biosynthetic process" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MEDEISSFFESSPPQKNMEEILENLNEFIKLNSSSQGGRRIVCVTSGGTTVPLEQRCVRYIDNFSSGNRGAASTENFVKAGYAVIFLYRRGTCQPYCRSLPDDPFLECFEFSDKTNIQVHTSHLEAVKMAVMDQQTAVAEGSLLKLPFSTIYEYLQMLRLIAEALKDVGPCSMFYLAAAVSDFYVPWKSMTEHKIESGSGPLDIRLAQVPKMLSVLRSNWAPKAFCISFKLETDSKILMEKATKALRKYKVHAVVANELSTRKEEVVVVSSSGNVVVRRECDKPESFVEDNLIRLIVDRHSTYIKESHN", - "output": "cytoplasm ; nucleus ; phosphopantothenate--cysteine ligase activity ; coenzyme A biosynthetic process" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MYAIVRSGGRQHKVAVGDIVEVDKISTAQVGDTVELSTLLVVDGDAVTSDPWVLAGIKVQAEVVDHHKGAKIDILRYKNKTGYRRRQGHRQQYTAIKVTEIPTAAK", - "output": "cytoplasm ; ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MTVHIGAAPGDIAETVLMPGDPLRAKWAAERFLENPVCVNEVRGMLGFTGMWRGNRVTIHGSGMGMPSLSIYANELLRDYGAKTLIRIGSCGAMQADVKLRDVILAMTASTLSTPSSGIFRELNYAPCADYGLLQAAYKAAEGKGSPIHVGGIYSSDVFYDERPDLNEQMVRHGVLAVEMEAAELYTLAARHKARALAVLTVSDHLLTEEALPSEERQSSFSDMVEIALEAAFS", - "output": "purine-nucleoside phosphorylase activity ; nucleoside catabolic process ; purine nucleoside metabolic process" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MYSFVSEETGTLIVNSVLLFLAFVVFLLVTLAILTALRLCAYCCNIVNVSLVKPTVYVYSRVKNLNSSEGVPDLLV", - "output": "host cell endoplasmic reticulum-Golgi intermediate compartment ; host cell Golgi apparatus ; host cell Golgi membrane ; membrane ; virion membrane ; identical protein binding ; disruption of membrane integrity in another organism ; pore formation by virus in membrane of host cell ; viral budding from Golgi membrane" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MVENSPSPLPERAIYGFVLFLSSQFGFILYLVWAFIPESWLNSLGLTYWPQKYWAVALPVYLLIAIVIGYVLLFGINMMSTSPLDSIHTITDNYARNQRQKKYQEEAIPALRDISISEVNQMFFLAAKELYTEN", - "output": "glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex ; phosphatidylinositol N-acetylglucosaminyltransferase activity ; GPI anchor biosynthetic process" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MARYDLVDRLNTTFRQMEQELAAFAAHLEQHKLLVARVFSLPEVKKEDEHNPLNRIEVKQHLGNDAQSLALRHFRHLFIQQQSENRSSKAAVRLPGVLCYQVDNLSQAALVSHIQHINKLKTTFEHIVTVESELPTAARFEWVHRHLPGLITLNAYRTLTVLHDPATLRFGWANKHIIKNLHRDEVLAQLEKSLKSPRSVAPWTREEWQRKLEREYQDIAALPQNAKLKIKRPVKVQPIARVWYKGDQKQVQHACPTPLIALINRDNGARVPDVGELLNYDADNVQHRYKPQAQPLRLIIPRLHLYVAD", - "output": "cytoplasm ; DNA binding ; DNA replication termination" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MFMVNLLMLVIPVMLAMAFLTLLERKTLGYMQFRKGPNVVGPNGLLQPFADAMKLFIKEPLQPLTSSTSLYIIAPTLALSIALIMWTPLPIPYPLVNINLGVLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLCILLMSGSFTLSTLIKTQEHTWLLLPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNALTATIFMSAIHSMNFPEFFSINFTLKTLLLTTIFLWVRASYPRFRYDQLMHLLWKNFLPLTLAMCMWHTALPIFLANIPPQT", - "output": "mitochondrial inner membrane ; respirasome ; NADH dehydrogenase (ubiquinone) activity" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MTLKVPCPQCQKTVVWQASSEFRPFCSKRCQLIDLGEWAEESHKISQNIQVDTVLSEEMLDAMEDEFLLNNKFFVEPE", - "output": "DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) inhibitor activity ; zinc ion binding ; regulation of DNA-templated transcription" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MNTKLTKIISGLFVATAAFQTASAGNITDIKVSSLPNKQKIVKVSFDKEIVNPTGFVTSSPARIALDFEQTGISMDQQVLEYADPLLSKISAAQNSSRARLVLNLNKPGQYNTEVRGNKVWIFINESDDTVSAPARPAVKAAPAAPAKQQAAAPFTESVVSVSAPFSPAKQQAAASAKQQAATPAKQTNIDFRKDGKNAGIIELAALGFAGQPDISQQHDHIIVTLKNHTLPTALQRSLDVADFKTPVQKVTLKRLNNDTQLIITTTGNWELVNKSAAPGYFTFQVLPKKQNLESGGVNNAPKTFTGRKISLDFQDVEIRTILQILAKESGMNIVASDSVSGKMTLSLKDVPWDQALDLVMQARNLDMRQQGNIVNMAPRRAACQRQSLLTSGKRHCRSGRAVFPKLPIEIQKCGRIPQHPALDNADTTGNRNTLVSGRGSVLIDPATNTLIVTDTRSVIEKFRKLIDELDVPAQQVMIEARIVEAADGFSRDLGVKFGATGRKKLKNETSAFGWGVNSGFGGGDKWEAKPKSTCRLPCRKQHFAGARDFSGALNLELSASESLSKTKTLANPRVLTQNRKEAKIESGYEIPFTVTTRSGGGNSTNTELKKAVLGLTVTANITPDGQIIMTVKINKDSPRQCASGNNTILCISTKSLNTQAMVENGGTLIVGGIYEENNGNTLTKVPLLATSPLSATSLKHSGKNRPPRTADFQLPPREL", - "output": "cell outer membrane ; establishment of competence for transformation ; protein secretion" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "GGCCSHPACAANNQDYC", - "output": "extracellular region ; host cell postsynaptic membrane ; acetylcholine receptor inhibitor activity ; ion channel regulator activity ; toxin activity" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MARVTVQDAVEKIGNRFDLILTAARRARQLQLNQSAPLVPEDNDKPTVIALREIEKGLINQDIMDAQEFQKMAKVQETEEAAVALITE", - "output": "DNA-directed RNA polymerase complex ; DNA binding ; DNA-directed 5'-3' RNA polymerase activity ; DNA-templated transcription" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MDPGIANHTLPEEFEEVVVPEMLEKEVGAKVDVKPTLTTSSPAPSYIELIDPGVHNIEIYAEMYNRPIYRVALFFSLFLIAYAYGLDGNIRYTFQAYATSSYSQHSLLSTVNCIKTVIAAVGQIFFARLSDIFGRFSIMIVSIIFYSMGTIIESQAVNITRFAVGGCFYQLGLTGIILILEVIASDFSNLNWRLLALFIPALPFIINTWISGNVTSAIDANWKWGIGMWAFILPLACIPLGICMLHMRYLARKHAKDRLKPEFEALNKLKWKSFCIDIAFWKLDIIGMLLITVFFGCVLVPFTLAGGLKEEWKTAHIIVPEVIGWVVVLPLYMLWEIKYSRHPLTPWDLIQDRGIFFALLIAFFINFNWYMQGDYMYTVLVVAVHESIKSATRITSLYSFVSVIVGTILGFILIKVRRTKPFIIFGISCWIVSFGLLVHYRGDSGAHSGIIGSLCLLGFGAGSFTYVTQASIQASAKTHARMAVVTSLYLATYNIGSAFGSSVSGAVWTNILPKEISKRISDPTLAAQAYGSPFTFITTYTWGTPERIALVMSYRYVQKILCIIGLVFCFPLLGCAFMLRNHKLTDSIALEGNDHLESKNTFEIEEKEESFLKNKFFTHFTSSKDRKD", - "output": "cytoplasmic vesicle ; endosome ; endosome membrane ; fungal-type vacuole ; vacuolar membrane ; siderophore uptake transmembrane transporter activity ; siderophore-iron transmembrane transporter activity ; intracellular iron ion homeostasis ; siderophore transport ; transmembrane transport" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MSILFNAYPLARPALFAMDAETAHEVTLASLQRAYDCGTTRRWLHDQPQLPTTLMGMTLRNPVGLAAGLDKNGAFIDALGNLGFGFVEVGTVTPRAQSGNPKPRMFRLPKANALINRLGFNNQGLDAFLANVTRSRFRSQGGILGLNIGKNADTPIERAADDYLIGLAGVYPHADYVTVNISSPNTKNLRALQGGDELSQLLAALRDKRAELAQQHARQVPLVVKIAPDLSQEQIDIIADTLLSNGVDGVIATNTTLSREAVQGMPHAAETGGLSGAPVHELSLAVIERLRQRVGSALAIIGVGGILSGQQAREKIAAGADAVQLYTGLIYRGPALVGECVGTLKNTAR", - "output": "cytoplasm ; plasma membrane ; dihydroorotate dehydrogenase (quinone) activity ; 'de novo' pyrimidine nucleobase biosynthetic process ; 'de novo' UMP biosynthetic process" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MGLSTLEQKLTEMITAPVEALGFELVGIEFIRGRTSTLRIYIDSEDGINVDDCADVSHQVSAVLDVEDPITVAYNLEVSSPGLDRPLFTAEHYARFVGEEVTLVLRMAVQNRRKWQGVIKAVDGEMITVTVEGKDEVFALSNIQKANLVPHF", - "output": "cytoplasm ; ribosomal small subunit biogenesis" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MNNYETVFILTPVLSDAQMKEAVEKFTNLLKAQGAEIVNEENWGLRKLAYPIDKKTTGFYQLVEFKADPSVIATLELNFRRDERVIRFLTFRQDKYAAEYAAKRRNLKSSKETVKENN", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MLLQKTLCIVKPDGVRRGLIGDVVSRFERVGLKMVAAKMLIVDESLAKKHYLYDDIVFRHSEAVWNSLIKFISNSPVFTFVVEGVESIEVVRKLCGATEPKLAIPGTIRGDFSYHSFKYSNEKGFSIYNVIHASANEADAMREIPIWFKDNEILNYKRDDECEHYYC", - "output": "cytosol ; ATP binding ; metal ion binding ; nucleoside diphosphate kinase activity ; CTP biosynthetic process ; GTP biosynthetic process ; phosphorylation ; UTP biosynthetic process" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MVKAKKQYGQNFLIDKSVLAKIIQAIPKEMNNIIEIGPGLGDLTQELLKISQVKAYEIDNDLIPILKKKFQKELECGKFNLIHQDASEAFNPSLDEKPYFLVANLPYYVASHIILKALEDKNCLGLIVMAQREMAEKFCAKEGNSEFSSLGVLSAMICERKILFDVDPQCFNPPPKVMSAVMSLIKTKDFDELCEIENFKNFLKDCFKAPRKQLLGNLKTYKAKVLEVLSTLGLKENIRPHEICVDLYLKIYDKLKDEYGRKQRDK", - "output": "cytoplasm ; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity ; RNA binding" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MSFSFGFTSNDFDDDELVAQPETFVESSKENENTTAYINPLDSDFLSQAGVVQPNVEDLGTILESLKDVRLTFEEFQSPIYRKPLIKRELFDVKHQLMLETDAQSNNNSTELDILLGDTSEDLRKNIYEGGLKSWECSYDLVDLLSENVDRISNDIDAVVEIGCGTALPSEFLFRSALLRNDRSKGLKFVLTDYNASVLRLVTIPNLVITWAKTVLTKEQWYALQKDECEDIPINNEELLLTSKLLAAFYDDVQSRNISVTLISGSWGRKFSNLIHEVLSGSQKVLSLSSETIYQPDNLPVIAETILDIHNLPQTDVKTYVAAKDIYFGVGGSITEFEAYLDDKINSEHLPIHSERFKVNSGLKRSIICIETNKAIR", - "output": "cytoplasm ; nucleus ; protein-L-histidine N-tele-methyltransferase activity ; peptidyl-histidine methylation, to form tele-methylhistidine ; positive regulation of translational fidelity ; ribosomal large subunit assembly" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MKIRILTIGQKMPAWVLTGFEDYFKRIQPFVQTQVIKLPMAKRGKNDSEADILKYCQIEGESILNALKPNETLIALEVGGRELSTEKLADTMKQWMLEGNDVALAIGGPDGLSDQVRKAAAWHWSLSKLTMPHPLVRILLIEQLYRAMSINHNHPYHRA", - "output": "cytoplasm ; rRNA (pseudouridine-N3-)-methyltransferase activity" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MTQLAIGKPAPLGAHYDGQGVNFTLFSAHAERVELCVFDANGQEHRYDLPGHSGDIWHGYLPDARPGLRYGYRVHGPWQPAEGHRFNPAKLLIDPCARQIDGEFKDNPLLHAGHNEPDYRDNAAIAPKCVVVVDHYDWEDDAPPRTPWGSTIIYEAHVKGLTYLHPEIPVEIRGTYKALGHPVMINYLKQLGITALELLPVAQFASEPRLQRMGLSNYWGYNPVAMFALHPAYACSPETALHEFRDAIKALHKAGIEVILDIVLNHSAELDLDGPLFSLRGIDNRSYYWIREDGDYHNWTGCGNTLNLSHPAVVDYASACLRYWVETCHVDGFRFDLAAVMGRTPEFRQDAPLFTAIQNCPVLSQVKLIAEPWDIAPGGYQVGNFPPLFAEWNDHFRDAARRFWLHYDLPLGAFAGRFAASSDVFKRNGRLPSAAINLVTAHDGFTLRDCVCFNHKHNEANGEENRDGTNNNYSNNHGKEGLGGSLDLVERRRDSIHALLTTLLLSQGTPMLLAGDEHGHSQHGNNNAYCQDNQLTWLDWSQASSGLTAFTAALIHLRKRIPALVENRWWEEGDGNVRWLNRYAQPLSTDEWQNGPKQLQILLSDRFLIAINATLEVTEIVLPAGEWHAIPPFAGEDNPVITAVWQGPAHGLCVFQR", - "output": "glycogen debranching enzyme activity ; hydrolase activity, hydrolyzing O-glycosyl compounds ; glycogen catabolic process" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MSDRQTQIPAGGGREDDHDDQVQSAGQVQVNTEGVDDLLDEIDGLLENNAEEFVRSYVQKGGE", - "output": "proteasome binding ; protein tag ; modification-dependent protein catabolic process ; proteasomal protein catabolic process ; protein pupylation" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MLNPYLLRNELHLTAKKLLKKGYKLNISKISSMEEKRKTLQIQTENLQFKHNALSNLFKENKNIKNKNELLRHQVIQSSKDLNASKIELNSLKEKIHHFSMCIPNIPSDDVPEGNTSINNKEIKYWGQKKKYDFEIQDHIELGKKFNELDWKSSAQMSGSRFVIMKGKIALLHRALSQFMLDLHTLKHGYIESYVPYLVHSEALYGTGQLPKFSDDLFHINLTDKKKYILIPTGEVPLTNLVYDQIIDEKDLPIMLTAHTPCFRSEASSYGRDTKGLIRLHQFDKVELVQIVKPEKSYEALEKLTNHAEKVLQLLNLPYRKMLLCTGDTGFAAVKTYDLEVWFPSEKKYREVSSCSNMSDFQARRIKARYRKKSEQKNFFVHTLNGSGLAIGRTLAAILENYQHSNGRIEIPKVLQKKYMQGLEFIN", - "output": "cytoplasm ; ATP binding ; serine-tRNA ligase activity ; selenocysteine biosynthetic process ; seryl-tRNA aminoacylation" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MTAITASMVKELRDRTGLAMMECKKALTEANGDIELAIDNLRKSGQAKAAKKAGNIAADGAITIVQDGNKAVLVEVNCQTDFVAKDENFSNFSNAVAKAILASGETDAEKVAELKLEDGQSVEEARIALVQKIGENIQVRRAKIVEGENLAVYKHGLRIGVVVSYTGSAETGKGIAMHVAAFNPVAVSAEAVPADLVAKEKEIAEAKAIESGKPANIVEKMVSGSVEKYLNEVALDRQMYVIDNDKKVADVLKATATNIVEFVRFEVGEGIEKKAEMSFAEEVAAAQAAAK", - "output": "cytoplasm ; translation elongation factor activity" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MSTILIAIIALAALAAVFGAILGFASIRFKVEADPIVDQIDSILPQTQCGQCGYPGCRPYAEAIANGDQINKCPPGGQATIEKLADLMGVEAEESAHDLDSKVKTVAFIHEDMCIGCTKCIQACPVDAIVGGTKALHTVIKDECTGCDLCVAPCPTDCIEMIPVETTTESWKWKLNAIPVVNITDAANAANVTDSIK", - "output": "plasma membrane ; 4 iron, 4 sulfur cluster binding ; electron transfer activity ; metal ion binding" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MGITKKPDLNDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRPVATTVFLVGTVVALWLGIGATLPIDKSLTLGL", - "output": "chloroplast thylakoid membrane ; electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity ; electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity ; photosynthetic electron transport chain" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MRIVLITGISGSGKSVALNALEDAGYYCVDNLPPHVLPELARYLAEEGQHRLAVAIDARSSASLDEMPGLIRALSLEHDVRVLFLNASTQSLIQRFSETRRRHPLSGSPSHDANVGLLSSLEEAIERERELVAPLAEFGHQIDTSTLRANVLRTWVKRFIEQKNNDLMVMFESFGFKRGVPLDADLMFDVRALPNPYYDHELRPLTGLDQPVIAFLDALPIVHQMIDDIHAFLMKWLPHFREDNRSYLTVAIGCTGGQHRSVFIAETLAARLAHDANVIVRHRDAPVDVDASSRLVADVHRP", - "output": "ATP binding ; GTP binding" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MLKEFQEFALKGNMVDLAIGVIIGGAFGGLVNSIVNDIIMPIIGLITGGIDFSNMFIQLAGDPKTTLAAAREAGATIAYGNFITLLINFLIIAWVLFLVVKLMNRLKKREEAKPAPAAPSEEVLLTEIRDILAKQQKA", - "output": "plasma membrane ; mechanosensitive monoatomic ion channel activity" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MVLSSADKNNVKACWGKIGSHAGEYGAEALERTFCSFPTTKTYFPHFDLSHGSAQVQAHGQKVADALTKAVAHINDLPNALSDLSDLHAYKLRVDPVNFKFLSHCLLVTLACHHPEEFTPAVHASLDKFFSAVSTVLTSKYR", - "output": "hemoglobin complex ; heme binding ; iron ion binding ; oxygen binding ; oxygen carrier activity" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MRIKNKIKKRIIELIDLAYITARKGDLELAREYIKLAEMYSRKGRVKIPLKYKRMFCRKCYTPLITGVTERRRIRSKILIRTCLICNWQRRYVLSRNKGSNKEN", - "output": "cytoplasm ; ribonuclease P complex ; ribonuclease P activity ; zinc ion binding ; tRNA 5'-leader removal" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MVALKGIPKVLSPELLFALARMGHGDEIVLADANFPTSSICQCGPVEIRADGLDIPQLLEAVLRLLPLDTYVESPAAVMDLVPSDKEKGLQTPIWKRYESLLLEADCKKTLMKLERFEFYERAKKAFAVVATGEMALYGNIILKKGTLDLGPS", - "output": "fucose binding ; L-fucose mutarotase activity ; racemase and epimerase activity, acting on carbohydrates and derivatives ; female mating behavior ; fucose metabolic process ; fucosylation ; negative regulation of neuron differentiation ; neuron differentiation" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MTDYPIKYRLIKTEKHTGARLGEIITPHGTFPTPMFMPVGTQATVKTQSPEELKAIGSGIILSNTYHLWLRPGDELIARSGGLHKFMNWDQPILTDSGGFQVYSLADSRNITEEGVTFKNHLNGSKMFLSPEKAISIQNNLGSDIMMSFDECPQFYQPYDYVKKSIERTSRWAERGLKAHRRPHDQGLFGIVQGAGFEDLRRQSAADLVAMDFPGYSIGGLAVGESHEEMNAVLDFTTPLLPENKPRYLMGVGAPDSLIDGVIRGVDMFDCVLPTRIARNGTCMTSEGRLVIKNAKFAEDFTPLDHDCDCYTCQNYSRAYIRHLLKADETFGIRLTSYHNLYFLVNLMKKVRQAIMDDNLLEFRQDFLERYGYNKSNRNF", - "output": "metal ion binding ; queuine tRNA-ribosyltransferase activity ; queuosine biosynthetic process ; tRNA-guanine transglycosylation" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MYPAHLLVLLAVCVSLLGASDIPPQPLNLVQFSNMIQCANHGRRPTSNYMDYGCYCGKGGSGTPVDELDRCCKIHDDCYGEAEKSQKCAPYWTWYTWKCGSDGPQCDDSKTGCQRFVCDCDATAAKCFAKAPYNKENYNIKTRCQ", - "output": "extracellular region ; calcium ion binding ; phospholipase A2 activity ; toxin activity ; arachidonic acid secretion ; lipid catabolic process ; phospholipid metabolic process" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MANNRVKSTNDLELKDRLVAINRVTKVTKGGRTFSFAAIVVVGNEDGIVGWGLGKAGEVTTAIAKGVEAAKKNLIKVPVHKGTIPHEQLAKFGGAQVLIRPASHGTGVKAGGAMRAVLESVGITDVLAKSKGSSNPHNLVKATIAALGELRSPFDVAQNRGVAVEKVFRG", - "output": "small ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MSEFSNVTVIKKANIYFEGKVASHTVLFPDGTKKTLGIMQAGDYEFSTANAEVMEILSGTLEWQMKGECCWKTIGAGESFQIPADSVFLMKVPAVADYCCSYIQ", - "output": "guanosine phosphorylase activity ; purine-nucleoside phosphorylase activity ; pyrimidine-nucleoside phosphorylase activity ; thymidine phosphorylase activity ; uridine phosphorylase activity" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MEPLFPASPLTTWNTSSVVPSGSGDENGTLAGLGPSPGARAVVVPVLYLLVCAVGLGGNTLVIYVVLRHAKMKTVTNIYILNLAVADVLLMLGLPFVATQNAISYWPFGPVLCRLVMTLDGINQFTSIFCLTVMSVDRYLAVVHPIRSARWRRPRVAKLASAAVWAFSLVMSLPLVVFADIQEGWNTCNLSWPEPVGLWGAVFIIYTSVLGFFGPLLVICLCYLLIVVKLKASGVRVGSTRRRSERKVTRMVVVVVLVFAGCWLPFFIVNIVNLAFALPEEPASAGAYFFVVVLSYANSCANPLLYGFLSDNFRQSFRKVLCLRKGYGAGAEDADATEPQPGPSSRLQEAMMPVRSCKANGLMQTSKL", - "output": "neuron projection ; plasma membrane ; somatostatin receptor activity ; cellular response to glucocorticoid stimulus ; glucose homeostasis ; neuropeptide signaling pathway ; positive regulation of cytokinesis ; regulation of insulin secretion" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MAMIKMSPEEIRAKSQSYGQGSDQIRQILSDLTRAQGEIAANWEGQAFSRFEEQFQQLSPKVEKFAQLLEEIKQQLNSTADAVQEQDQQLSNNFGLQ", - "output": "extracellular region" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MLVWLAEHLVKYYSGFNVFSYLTFRAIVSLLTALFISLWMGPRMIAHLQKLSFGQVVRNDGPESHFSKRGTPTMGGIMILTAIVISVLLWAYPSNPYVWCVLVVLVGYGVIGFVDDYRKVVRKDTKGLIARWKYFWMSVIALGVAFALYLVGKDTPATQLVVPFFKDVMPQLGLFYILLAYFVIVGTGNAVNLTDGLDGLAIMPTVFVAGGFALVAWATGNMNFASYLHIPYLRHAGELVIVCTAIVGAGLGFLWFNTYPAQVFMGDVGSLALGGALGIIAVLLRQEFLLVIMGGVFVVETLSVILQVGSFKLRGQRIFRMAPIHHHYELKGWPEPRVIVRFWIISLMLVLIGLATLKVR", - "output": "plasma membrane ; metal ion binding ; phospho-N-acetylmuramoyl-pentapeptide-transferase activity ; UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate transferase activity ; cell cycle ; cell division ; cell wall organization ; peptidoglycan biosynthetic process ; regulation of cell shape" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MEAVRPDSCERGTAAARAEERPAPEARAHFRVTRFIMEAGVKLGMQSIPIATACTIYHKFFCEINLDAYDLYLVAMSSLYLAGKVEEQHLRTRDIINVSHRYFNPGSEPLELDSRFWELRDSIVQCELLMLRVLRFQVSFQHPHKYLLHYLISLKNWLNRYSWQRTPISVTAWALLRDSYHGGLCLRFQAQHLAVAVLYLALQVYGVEVPAEGEAEKPWWQVFSDDLTKPIIDNIVSDLIQIYTMDTEIP", - "output": "cyclin-dependent protein kinase holoenzyme complex ; nucleus ; cyclin-dependent protein serine/threonine kinase regulator activity ; protein kinase activator activity ; activation of protein kinase activity ; positive regulation of MAPK cascade ; regulation of cell cycle G2/M phase transition ; regulation of transcription by RNA polymerase II" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MVAIDLGASSGRVMLASYYPGQQQLTLREVCRFTNQIKSIDGSDVWDIDAIEQSIREGLSQLDSEGIALDSIGIDSWGVDFVLLDKQGKRIGQPVSYRDSRTQGVMARAQQTLGSNAIYRRTGIQFLPFNTLYQLRALSEQQPHLLADVAHLLLIPDYLHYRLTGQLNWEYTNASTTQLLNIETGDWDSDLLAYAGVPAHWFAKPGKPGNTIGYWHSANGQQVPVVAVATHDTASAVLAAPLIDADAAYLSSGTWSLMGFESGTPLTHQQAQCSNITNEGGAEGRYRVLKNIMGLWLLQRATDELQIDDLPQLIEQAARQPACRSLINPNDSRFINPPNMCREIQNACREHQFPVPNTAAQLARCIFDSLAMLYRQVAQELATLRGRPISHLHIVGGGCQNQFLNQLCADACGLNVSMGPVEASTLGNIGSQLISLGEVADVTHYRRIVANNFPLHHLSPHDNSDFAAHWLQFQSLSQLPKELCI", - "output": "cytosol ; ATP binding ; glycerol kinase activity ; rhamnulokinase activity ; glycerol metabolic process ; phosphorylation ; rhamnose catabolic process" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MTSATKTNNSGSISSPIVVALDYANKDAALAFADQVSPQDCRLKVGKEMFTLYGPELIRDLHQRGFDVFLDLKFHDIPNTTARAVAAAAELGVWMVNVHASGGARMMSAAKEALLPYGAQAPLLIAVTVLTSMDGEDLRDIGITISPAEQAERLAKLTWDCGLDGVVCSAHEAVRLKQVCGEDFSLVTPGIRPQGSEAGDQRRIMTPEQAVAVGVDYMVIGRPITQSPDPEKTLREILASLTKVA", - "output": "orotidine-5'-phosphate decarboxylase activity ; 'de novo' pyrimidine nucleobase biosynthetic process ; 'de novo' UMP biosynthetic process" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MSGGTTKAAENAKADLPRLMKALRDQGVTDPQVLKAIETTPRDLFTPDLFKDRSWEDSALPIACGQTISQPYIVGLMTQALTVEPRSRVLEIGTGSGYQTTILSKVSRLVYTIERYRTLMKEAEARFNTLGLTNVITKFGDGGEGWAEQAPFDRIMVTAAAEDDPKRLLSQLKPNGVLVAPVGKGPVQSLRRYAGDGKGGFRVEILCDVRFVPLLAGVAKDQ", - "output": "cytoplasm ; protein-L-isoaspartate (D-aspartate) O-methyltransferase activity ; methylation ; protein modification process ; protein repair" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MWTKPKFEEMRLGFEVTLYISNR", - "output": "pyrroloquinoline quinone biosynthetic process" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MPALSRWASLPGPSMREAAFMYSTAVAIFLVILVAALQGSAPRESPLPYHIPLDPEGSLELSWNVSYTQEAIHFQLLVRRLKAGVLFGMSDRGELENADLVVLWTDGDTAYFADAWSDQKGQIHLDPQQDYQLLQVQRTPEGLTLLFKRPFGTCDPKDYLIEDGTVHLVYGILEEPFRSLEAINGSGLQMGLQRVQLLKPNIPEPELPSDACTMEVQAPNIQIPSQETTYWCYIKELPKGFSRHHIIKYEPIVTKGNEALVHHMEVFQCAPEMDSVPHFSGPCDSKMKPDRLNYCRHVLAAWALGAKAFYYPEEAGLAFGGPGSSRYLRLEVHYHNPLVIEGRNDSSGIRLYYTAKLRRFNAGIMELGLVYTPVMAIPPRETAFILTGYCTDKCTQLALPPSGIHIFASQLHTHLTGRKVVTVLVRDGREWEIVNQDNHYSPHFQEIRMLKKVVSVHPGDVLITSCTYNTEDRELATVGGFGILEEMCVNYVHYYPQTQLELCKSAVDAGFLQKYFHLINRFNNEDVCTCPQASVSQQFTSVPWNSFNRDVLKALYSFAPISMHCNKSSAVRFQGEWNLQPLPKVISTLEEPTPQCPTSQGRSPAGPTVVSIGGGKG", - "output": "centriolar satellite ; chromaffin granule lumen ; chromaffin granule membrane ; cytoplasm ; endoplasmic reticulum ; extracellular region ; extracellular space ; intracellular membrane-bounded organelle ; membrane ; secretory granule lumen ; secretory granule membrane ; synapse ; transport vesicle membrane ; catalytic activity ; copper ion binding ; dopamine beta-monooxygenase activity ; L-ascorbic acid binding ; behavioral response to ethanol ; blood vessel remodeling ; chemical synaptic transmission ; dopamine catabolic process ; fear response ; glucose homeostasis ; homoiothermy ; leukocyte mediated immunity ; leukocyte migration ; locomotory behavior ; maternal behavior ; memory ; norepinephrine biosynthetic process ; octopamine biosynthetic process ; positive regulation of cold-induced thermogenesis ; positive regulation of vasoconstriction ; regulation of extrinsic apoptotic signaling pathway ; regulation of vascular associated smooth muscle cell proliferation ; regulation of vascular endothelial cell proliferation ; response to amphetamine ; response to pain ; vasoconstriction ; visual learning" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MKFSLACLLALAGLQAALADPATCEKEAQFVKQELIGQPYTDAVANALQSNPIRVLHPGDMITMEYIASRLNIQVNENNEIISAHCA", - "output": "extracellular region ; serine-type endopeptidase inhibitor activity ; negative regulation of peptidase activity" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MLVWLAEHLVKYYSGFNVFSYLTFRAIVSLLTALFISLWMGPRMIAHLQKLSFGQVVRNDGPESHFSKRGTPTMGGIMILTAIVISVLLWAYPSNPYVWCVLVVLVGYGVIGFVDDYRKVVRKDTKGLIARWKYFWMSVIALGVAFALYLAGKDTPATQLVVPFFKDVMPQLGLFYILLAYFVIVGTGNAVNLTDGLDGLAIMPTVFVAGGFALVAWATGNMNFASYLHIPYLRHAGELVIVCTAIVGAGLGFLWFNTYPAQVFMGDVGSLALGGALGIIAVLLRQEFLLVIMGGVFVVETLSVILQVGSFKLRGQRIFRMAPIHHHYELKGWPEPRVIVRFWIISLMLVLIGLATLKVR", - "output": "plasma membrane ; metal ion binding ; phospho-N-acetylmuramoyl-pentapeptide-transferase activity ; UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate transferase activity ; cell cycle ; cell division ; cell wall organization ; peptidoglycan biosynthetic process ; regulation of cell shape" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MTEYKKVIAQNNKAIFNYFIEERLEAGIVLNGSEVQSLRQGKASIEESHAADTGHEVFLYNCHIAEYEKANRFNHSTRRPRKLLLHTKEIKKIIGRIRIKGYTLVALSMYFNKQNKVKVELGIAKGKKLHDKRESIKEKDWKRDQSRLIRQK", - "output": "cytoplasm ; RNA binding ; trans-translation" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MSTQIAPARISDPAAFGRVAVLLGGTSSEREVSLNSGSNVLDALRARGVDAQPVDGIPALAQALVAQRFDRVFNVLHGHNGGGEDGIVQGLMEAFGVPYTGSNVLGSALSMDKIRTKQVWLSLGLSTPRYARLAAGASAQQIHAAAEQIGLPVIVKPANEGSSVGVSRVFDQAQLDEAVTLAARYDGALLMEQLIEGDELTVAVLGDVALPSIRIVPKGQWYDYNAKYIAEDTQYLCPGLDGDAEAQIGQLALDAFRAAGCSGWGRVDVMRDGSTGQLYLLEVNTAPGMTSHSLVPKAARQLGIDFEALVWRVLEQTL", - "output": "cytosol ; ATP binding ; D-alanine-D-alanine ligase activity ; metal ion binding ; cell wall organization ; peptidoglycan biosynthetic process ; regulation of cell shape" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MVSKPFQRPFSLATRLTFFISLATIAAFFAFAWIMIHSVKVHFAEQDINDLKEISATLERVLNHPDETQARRLMTLEDIVSGYSNVLISLADSHGKTVYHSPGAPDIREFARDAIPDKDARGGEVFLLSGPTMMMPGHGHGHMEHSNWRMISLPVGPLVDGKPIYTLYIALSIDFHLHYINDLMNKLIMTASVISILIVFIVLLAVHKGHAPIRSVSRQIQNITSKDLDVRLDPQTVPIELEQLVLSFNHMIERIEDVFTRQSNFSADIAHEIRTPITNLITQTEIALSQSRSQKELEDVLYSNLEELTRMAKMVSDMLFLAQADNNQLIPEKKMLNLADEVGKVFDFFEALAEDRGVELQFVGDECQVAGDPLMLRRALSNLLSNALRYTPPGEAIVVRCQTVDHLVQVIVENPGTPIAPEHLPRLFDRFYRVDPSRQRKGEGSGIGLAIVKSIVVAHKGTVAVTSNARGTRFVIVLPERG", - "output": "plasma membrane ; ATP binding ; phosphorelay sensor kinase activity" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MADKEKDAVIVDETEHVDVDSKESKKEKKTKQQQKIEFLEAEVKELNDKYLRTLAEAENFKKRIQAEKIMDRKYAASSFATELLVPYEQFSKIVDFPSDNELLNNFLIGFKMIRDQFKSVLENEGVVEIKALGEVFDAKVHHAIEKESNKDKPNGTVLEVLQNGYLFKDRILRPAMVKINEWSEDNGEDK", - "output": "cytoplasm ; adenyl-nucleotide exchange factor activity ; protein homodimerization activity ; protein-folding chaperone binding ; protein folding" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MAATEDERPTGSGEGERLDFLRDRHVRFFQRCLQVLPERYSSLETSRLTIAFFALSGLDMLDSLDVVNKDDIIEWIYSLQVLPTEDRSNLNRCGFRGSSYLGIPFNPSKNPGTAHPYDSGHIAMTYTGLSCLVILGDDLSRVNKEACLAGLRALQLEDGSFCAVPEGSENDMRFVYCASCICYMLNNWSGMDMKKAINYIRRSMSYDNGLAQGAGLESHGGSTFCGIASLCLMGKLEEVFSEKELNRIKRWCIMRQQNGYHGRPNKPVDTCYSFWVGATLKLLKIFQYTNFEKNRNYILSTQDRLVGGFAKWPDSHPDALHAYFGICGLSLMEESGICKVHPALNVSTRTSERLRDLHQSWKTKDSKQCSENVHIST", - "output": "CAAX-protein geranylgeranyltransferase complex ; CAAX-protein geranylgeranyltransferase activity ; protein geranylgeranyltransferase activity ; zinc ion binding ; protein geranylgeranylation" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MLQGSLVALITPMNQDGSIHYEQLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEAIALSQAAEKAGADYTLSVVPYYNKPSQEGMYRHFKAVAEAAAIPMILYNVPGRTVVSMNNETILRLAEIPNIVGVKEASGNIGSNIELINRAPEGFVVLSGDDHTALPFMLCGGHGVITVAANAAPKLFADMCRAALQGDIALARELNDRLIPIYDTMFCEPSPAAPKWAVSALGRCEPHVRLPLVPLTEGGQAKVRAALKASGQL", - "output": "cytoplasm ; 4-hydroxy-tetrahydrodipicolinate synthase activity ; diaminopimelate biosynthetic process ; lysine biosynthetic process via diaminopimelate" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MLERLSGHTRLTALLAAPARHSLSPKMHNAAYAKLGLDYAYLAFEVDNSGLAAAVQGMRALGICGANVSMPNKQAIVPLLDELSPAAALAGAVNTVVNTDGKGHLVGHITDGTGAIRSLAEEGVAIKDQIITIAGAGGAGTAIAVQLGLDGAKEIRLFNRKTATFKQAKQVLKGINAKTSALASLQDLADDRAFRRSIAESSIYIDATGVGMKPLEEHSLITDPALIRPDLVVFDLVYHPAETKLLAFAREHGAKKVMNGLGMLLYQGAEAFKLMTGEDMPVAYIRELLCRNKE", - "output": "shikimate 3-dehydrogenase (NADP+) activity ; amino acid biosynthetic process ; aromatic amino acid family biosynthetic process ; chorismate biosynthetic process" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MHIKTLTVSQLNRYVKNTLDADFILNNASVKGEISNLKIHSSGHIYFSLKDGGSKINCVMFKSYAYNLKFALENGMDVVALGNVSVYEKEGSYQLYVKDMKREGIGDLYVAFEKLKEKLKEEGLFDDAHKKEIPKFSKKIGVITSPTGAAIKDIINVTKRRNKGIELLIYPALVQGTDASKTLIEGIKTLNKVEDVDIIILARGGGSIEELWAFNNEELAYAVYNSKKPIITGVGHETDFTIIDFVSDRRAPTPSAAAEIAAFDREVLINEILNYKYNIKNSMENIIKEKRNYLNLYKQKIEANSPTNIIANEYRNIDNLKELLNMKIEGKLNKEKNNLSRLSSLLEAHNPLNVLKKGYTLIEDEGNNLITEKEALKELNKINIIFKDGRAKLSIKYIEEF", - "output": "cytoplasm ; exodeoxyribonuclease VII complex ; exodeoxyribonuclease VII activity ; nucleic acid binding ; DNA catabolic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MKAVVLVVVSLLALSSINCDVFFEEKFPDDSWESNWVYSEHPGKEFGKFKLTAGKFFSDPEDDKGLKTSEDARFYALSRKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIMFGPDICGPGTKKVHVIFSYKGKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLEADWDFLPNKKIKDPEAKKPEDWDDKPTIPDPEDKKPEDWDKPEHIPDPDATKPEDWDDEMDGEWEPPMIDNPDYKGVWAPKQIDNPAYKGPWVHPEIDNPEYTPDSNLYKRDEICAVGLDLWQVKSGTIFDDFLITDDPAAAKERGEVIKKRQEGEKKMKSEQDEAEREKEKAEKPDDEEDDEDLDDETGDAAPVEEHDEL", - "output": "endoplasmic reticulum lumen ; calcium ion binding ; carbohydrate binding ; unfolded protein binding ; protein folding" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MRMVDIIEKKRDGKSLSKEEIEFFIKGYTNGDIPDYQASSLAMAIFFQDMNDEERAALTMAMVNSGDVIDLSKINGIKVDKHSTGGVGDTTTLVLAPLVAAVGVPVAKMSGRGLGHTGGTIDKLESIKGFHVEISEEDFIKLVNENQVAVIGQSGNLTPADKKLYALRDVTGTVNSIPLIASSIMSKKIAAGADAIVLDVKTGNGAFMKTLEDAEALAHAMVSIGNNVGRNTMAIISDMSQPLGRAIGNALELKEAIDTLNGKGPEDLTELVLTLGSQMVVLANRANTLEEARQLLNEAIENGSALEKFKTFLENQGGDVSVVDAPELLPTATYQIEYKAQSSGVVSELIANEIGVASMMLGAGRQTKEDEIDLSVGIVLNKKVGDVVKEGESLLTIHSNRENVDDVIKKLDESIEIQAQATTPTLIHKIITE", - "output": "1,4-alpha-oligoglucan phosphorylase activity ; deoxyuridine phosphorylase activity ; metal ion binding ; pyrimidine-nucleoside phosphorylase activity ; thymidine phosphorylase activity ; uridine phosphorylase activity ; pyrimidine nucleobase metabolic process ; pyrimidine nucleoside metabolic process" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MTVYHFVGIKGTGMSSLAQILHDMKHTVQGSDYEKRFFTQTALEKRSISILPFDKNNVEEGQVIIAGNAFPDTHEEIVAAKELNIPVHRYHHFLGDLMSQYTSVAVTGAHGKTSTTGLLAHVMQGAHPTSYLIGDGTGHGVENSKYFVFEACEYRRHFLSYNPDYAIMTNIDFDHPDYFADINDVFSAFQEMALQVKKGIIACGDDEELQKIQAKVPVIFYGFGEDNDFQARNIQKRTDGTIFDVFVRNTYYDTFKITGYGNHSVLNALAVIALCHYENVDVEAVKHQLTTFEGVKRRFNEKPMGEQVIIDDYAHHPTEINATIEAARQKHPEREVVAVFQPHTFSRTEKFLDEFAESLSKADQVYLCDIFGSARENKGELTIEDLQKRIDGAELITDTTTDVLKKHKNGVLIFMGAGDIQKFEAAYVKEVQVAEK", - "output": "cytoplasm ; ATP binding ; UDP-N-acetylmuramate-L-alanine ligase activity ; cell cycle ; cell division ; cell wall organization ; peptidoglycan biosynthetic process ; regulation of cell shape" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MADSYLHAPTLVRATTPLVQCLTNAVVMQFTANALLAIGASPAMVDTPAESFDFAGVADGVLINAGTPSAEQYAGMERAIEGATAAGTPWVLDPVGVGGLAERSAFLRRAVDKHPAAIRGNASEIVALAGLGAGGRGVDATDDVADAVEAAQVLARRTGGVVAVTGAEDLIVSRGRVSWLKSGDPMLQLVIGTGCALGAVTAAYLGATQDTDIDPHDAVVAAHAHLGAAGRIAATRATAPGSYAVALIDALHQLDRNQLANLTHLREENR", - "output": "ATP binding ; hydroxyethylthiazole kinase activity ; magnesium ion binding ; phosphorylation ; thiamine biosynthetic process ; thiamine diphosphate biosynthetic process" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MFKNLCDKIMTQKILITSALPYANGPLHFGHIAGAYLPADCYARFQRLMKKDVLYICGSDEYGIAITLSADLAGRTPQEHVDLFHHINQSFFEQLQISFDHYSRTTWKGHVEPTHQFFNDLLQNGYIEERTTDQLYSEKDQKFLADRYVVGTCPRCGFENARGDECPCCGASYEATELKNPRSKLTDASLILRPTKHWFLLLEKFKKPLMEWLETKNWKPNVINFIRGYIDHLHARAITRDMKWGISVPLPDSEGKVLYVWFDAPIGYISATKEWALLRGEEKLWEKYWLDPETKLVNFIGKDNIPFHASIFPAMIMGQNQPYKLVDELPANEFYNLEGKQFSKSDGWYIDLEDFFKHYTSDQIRYAIASNAPETSDSEFTWKDFQLRCNSDLLGKYGNLVNRVLVFIHNQCQGKVPESGVLEEQDRKFLKNIQDLVDQAAASYSTFKVRKASQIMMELSQLGNVYFDSKKPWQDAKNDYTKGRMHTTLNCCMECLKALALISFPIIPTAASKVWQFLGFQTPLEQEDWNRVKIEKLPLNQKILTPQILFQRVENEAVEREILKLQQLSLTKEKKSTPQSTQISISENILLKPLVDIEDFRKLDLRVGKIIQANPVPKSKKLFQLLVDIGIEKRIVVAGVAEFYKVEDLIGKNVVVVANLKPANLMGVTSQGMLLAAKGEGNLKLISIEDVAPGSLVS", - "output": "cytoplasm ; ATP binding ; metal ion binding ; methionine-tRNA ligase activity ; tRNA binding ; methionyl-tRNA aminoacylation" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MNRIALGLHYDGAAFSGWQSQPHRNTVQDHLEDAIERFAGVRLLTTVAGRTDAGVHALGQVIHLDTELVREPFSWVRGVNAFLPPSIALQWALPVDVGFHARFLAYERMYYYALYTGPHRVPMVHGRAGYQMLPPGQRLDVEAMRAAAAHLIGEHDFSAFRAAECQAKSPVKTMYDVTIRDDGNWVFLRFRASAFLHHMVRNLMGCLVAVGRRRYPPDWMAQVLAGRDRKLAAPTFMPDGLYLVGVKYPDAYPIPAADPSASLFHGVFDDAA", - "output": "RNA binding ; tRNA pseudouridine synthase activity ; tRNA pseudouridine synthesis" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MACLLETPIRMSVLSEVTASSRHYVDRLFDPDPQKVLQGVIDMKNAVIGNNKQKANLIVLGAVPRLLYLLQQETSSTELKTECAVVLGSLAMGTENNVKSLLDCHIIPALLQGLLSPDLKFIEACLRCLRTIFTSPVTPEELLYTDATVIPHLMALLSRSRYTQEYICQIFSHCCKGPDHQTILFNHGAVQNIAHLLTSLSYKVRMQALKCFSVLAFENPQVSMTLVNVLVDGELLPQIFVKMLQRDKPIEMQLTSAKCLTYMCRAGAIRTDDNCIVLKTLPCLVRMCSKERLLEERVEGAETLAYLIEPDVELQRIASITDHLIAMLADYFKYPSSVSAITDIKRLDHDLKHAHELRQAAFKLYASLGANDEDIRKKIIETENMMDRIVTGLSESSVKVRLAAVRCLHSLSRSVQQLRTSFQDHAVWKPLMKVLQNAPDEILVVASSMLCNLLLEFSPSKEPILESGAVELLCGLTQSENPALRVNGIWALMNMAFQAEQKIKADILRSLSTEQLFRLLSDSDLNVLMKTLGLLRNLLSTRPHIDKIMSTHGKQIMQAVTLILEGEHNIEVKEQTLCILANIADGTTAKDLIMTNDDILQKIKYYMGHSHVKLQLAAMFCISNLIWNEEEGSQERQDKLRDMGIVDILHKLSQSPDSNLCDKAKMALQQYLA", - "output": "cytoplasm ; cytosol ; extracellular region ; GID complex ; intracellular membrane-bounded organelle ; nucleoplasm ; nucleus ; specific granule lumen ; tertiary granule lumen ; ubiquitin ligase complex ; proteasome-mediated ubiquitin-dependent protein catabolic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MSDPDRARVLAAAGVSRETAERLDLYVAQLRRWQPIKNLVGPATLTEVWSRHIDDALQLLDLAPEARTWLDLGSGAGIPGLILAIAGRERGVRVDLVESNARKCAFLTETARLTEAPARVRNARIEAVIGEYGGTDVVCARALAPMTQLLAWTEPLLKTGTTGLFPKGRDVQAELTQAGAQWRVVNDLVPSRTDSEARIVRVTALAAPSHR", - "output": "cytoplasm ; rRNA (guanine-N7-)-methyltransferase activity" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MASLKDMRVRIASTKATQKITKAMQMVAASKLRRAQMAAEAARPYAEKMDSVISNIAGAAAGSPGAPVLLAGTGKDQVHLLLVCTGERGLSGAFNSSIVRLARERAYALMNQGKEVKFFCVGRKGYEQLRRTFDKQIIENLELRSVRQLGFVNAEDIAKKVIARFNAGEFDVCTLFYSRFKSVISQIPTAQQLIPLVVEAPAAGSVATSYEYEPEEDEILSTLLPRNLAVQIFRALLENNASFYGAQMSAMDNATRNAGDMIRKQTLIYNRTRQAMITKELIEIISGAEAI", - "output": "plasma membrane ; proton-transporting ATP synthase complex, catalytic core F(1) ; ATP binding ; proton-transporting ATP synthase activity, rotational mechanism ; proton motive force-driven plasma membrane ATP synthesis" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MNRLGFVFQSAPHSTSKGREGLDAILAASAYSEDIQIFFIGDGVLQLLKNQEPEKILSRDYISGFKMLELYDLEEIFVCQNAMGNRGIKEEYLLIDVDSISNKDINEKLSQCDQIMVF", - "output": "cytoplasm" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MEYRKIKDEDDHDVASDIESVKGKSHTVASSNIAMATLGVGSSERINWKRKGVVTCALTILTSSQAILIVWSKRAGKYEYSVTTANFLVGTLKCALSLLALTRIWKNEGVTDDNRLSTTFDEVKVFPIPAALYLFKNLLQYYIFAYVDAPGYQILKNLNIISTGVLYRIILKRKLSEIQWAGFILLCCGCTTAQLNSNSDRVLQTSLPGWTMAIVMALLSGFAGVYTEAIIKKRPSRNINVQNFWLYVFGMAFNAVAIVIQDFDAVANKGFFHGYSFITLLMILNHALSGIAVSMVMKYADNIVKVYSTSVAMLLTAVVSVFLFNFHLSLAFFLGSTVVSVSVYLHSAGKLR", - "output": "endosome ; Golgi apparatus ; Golgi membrane ; trans-Golgi network ; pyrimidine nucleotide-sugar transmembrane transporter activity ; sialic acid transmembrane transporter activity ; carbohydrate transport ; sialic acid transport" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MERAIFAGGCFWCMVQPFEEQAGILSVRSGYTGGHLPNPSYEQVCAKTTGHTEAVEIIFDPEEISYKELVELYWVQTDPTDAFGQFEDRGDNYRPVIYYTTERQKEIAEQSKANLQASGRFDQPIVTTIEPAEPFYLAEDYHQGFYKKNPKRYAQSSAIRHQFLEENWS", - "output": "L-methionine:thioredoxin-disulfide S-oxidoreductase activity ; peptide-methionine (S)-S-oxide reductase activity ; protein modification process" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MDKFTTHTGVGIPLRRSNVDTDQIIPAVYLKRVTRTGFEDGLFAAWRNDPSFVLNNEGYAGASVLVAGPDFGTGSSREHAVWALQNYGFKVVISPRFADIFRGNSGKAGLLAAQVDESVVQKIWDLLDEHPGTAVTVDLESRTVRAGEGVDAIEASFDIDDYTRWRLLEGLDDIGITLGHADAIASYEATRPSWRPATIHAH", - "output": "3-isopropylmalate dehydratase complex ; 3-isopropylmalate dehydratase activity ; leucine biosynthetic process" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MVLTSKQKEELNGSILDYFESSQYKSSFEEFKKETGTELDVKKKGLLEKKWTSVIRLQKKVLDLEAKVAQLEEELNSGGGRGGGRGRGKEDALPRPPEKHILTGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAATGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNIVKGECLATYREHSHVVECLAFSTANIIDIPGSLLSTPEGKSKVKQGPGGNLVGQCGYLATGSRDKTIKIWELATGRCLATYIGHDNWVRAVRFHPCGKFLLSVGDDKTIRVWDIAQGRCIKTINEAHTHFISCLDFCLHNPHIATGGVDDVIKVWKLQ", - "output": "centrosomal corona ; centrosome ; cytoplasm ; microtubule ; microtubule associated complex ; microtubule cytoskeleton ; spindle ; dynein complex binding ; dynein heavy chain binding ; microtubule binding ; small GTPase binding ; adenylate cyclase-activating G protein-coupled cAMP receptor signaling pathway ; cell differentiation ; cell division ; centrosome localization ; establishment of mitotic spindle orientation ; Golgi localization ; microtubule sliding ; phagocytosis ; protein localization to centrosome" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MAEITVTIDTDQQKQAISDSFAKLDPQYLVKNPVLFVVELGTIIGLVMTIAPGLFGATGSRVYYAVITVLLGFTVIFANYAEAYAELEGEAQADSLRALQTEAEGKLLQNDDVDIEDISEDDYEVVASTEIEQDAVVFVDEGDIIPRDGTVVEGSASVDESAITGESEPVIRQSGGDRTSVVGGTEVLSDRIKVEVTSEEGESFLDQMIGLVEDAQRQKTPNEIAMTILLSGLTLVFVVAVATMFFFGEYLASFVGGFAGLDVAELVALLVALMPTTIGALLAAIRVAGMTRVTRRNVIAKSGRAVEAAGDLDALILDKTGTITTGERVAQDFHPLGDADDADVVRASYQSSLYDETTEGRSIVKLAEKMNGKVQTDGGQSASEELDEPGDSVDAPRDVSVTLDAEGLSESNFVPFSAETRMSGIDLSDGTEIRKGAVDAVEEYATTVPGKLRQKSNAISESGGTPLAIAVDGQVVGIIELQDELKPGIADRIAEIQKMGVETIMATGDNQRTARWVADQVGIDEFHAEFDPEEKIELVEDIQDDGKLVGMTGDGTNDAPALAKADVGLAMNAGTNAAKEAGNMVDLDSNPSKIIEVVGIGKQLLMTRGSLTTFSVANDVAKYFVLLPAILAAAIPGLGAMDILNLSTPASAVTATLMYNAFIIPLLIPLALRGVDYKAQSGAQLLRKNLIVYGGGGLIAPFIFIKAIDMLFVALGVFQ", - "output": "plasma membrane ; ATP binding ; ATP hydrolysis activity ; magnesium ion binding ; P-type potassium transmembrane transporter activity" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MSEQPTEPLSIKEEYQLWRKNCRYMYEFVSETALMWPSLTIQWLPNYTTTNGLIDAKLLLGTHTSNQSANQLKVASTQLSADPNVKANSKIKTVQKLENNAEICRARYMPQDANIVATINGLGEVDLYNLDTETRYSHFAPHTKNGYGLSWNPKQKGLLVTGADDNFVCVTDTTTNKTTFKSDIQKDIVNDVKWHQFNGNLFASVSEDSHVYLFDARDNKVVSQYYAESSNGINSLAFSPFAENLVAIGNTSSNINLLDLRKLGENSGLLHTMMGHSEGITCMEFSPHHDGILATGSQDRRIIIWDLFKVGEEQQQEDAEDGCPELFMMHAGHTAGVSDLSWCPFKDWMIGSVADDNIVHLWEISKKLITNEEAEVDVSILE", - "output": "cytoplasm ; nucleus ; Rpd3L complex ; Rpd3L-Expanded complex ; cellular response to reactive oxygen species ; chromatin remodeling ; DNA damage response ; histone acetylation ; histone deacetylation ; negative regulation of pseudohyphal growth ; regulation of DNA-templated transcription" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MASPEGTDGEGMGCCGWFQVEAIVERKTGDTISDDESEEENETDTDVDGFIDNTLINNTQEDRETAQQLLQVQTAHADAQTLQKLKRKYIGSPLSDISNQQTVYREEVKRRLILSEDSGYGNTLETLETSQQVEYEKGNGCGSSQNGGSQNSNCSEHSVSNMDIDTNMETPTHQLQELFKSSNVQGRLHFKFKEVYGVPYTELVRTFKSDSTCCNDWICAIFGVNETLAEALKTILKPQCVYYHMQCLTCSWGVIVMMLIRYICGKNRKTITKSLSSILNVPQEQMLIQPPKLRSPAVALYFYKTAMSNISEVYGETPEWIQRQTQLQHSLQDNQFELSKMVQWAFDNEVTDDSQIAFLYAQLADIDSNAQAFLKSNMQAKYVKDCGIMCRHYKRAQQQQMNMCQWIKHICSKVDEGGDWKPIVQFLRYQGVDFISFLSYFKLFLQGTPKHNCLVLCGPPNTGKSCFAMSLINFFQGSVISFVNSQSHFWLQPLDNAKLGLLDDATDTCWRYIDDYLRNLLDGNPISLDRKHKQLVQIKCPPVIITTNVNPMQDAKLRYLHSRISVFKFENPFPLDNNGNPVYELSNVNWKCFFERTWSRLNLDNDEDKENNGDSIPTFRCVPEQNTRLL", - "output": "host cell nucleus ; ATP binding ; ATP hydrolysis activity ; DNA binding ; DNA helicase activity ; DNA replication" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MTATASDDEAVTALALSAAKGNGRALEAFIKATQQDVWRFVAYLSDVGSADDLTQETFLRAIGAIPRFSARSSARTWLLAIARHVVADHIRHVRSRPRTTRGARPEHLIDGDRHARGFEDLVEVTTMIADLTTDQREALLLTQLLGLSYADAAAVCGCPVGTIRSRVARARDALLADAEPDDLTG", - "output": "DNA binding ; sigma factor activity ; DNA-templated transcription initiation ; regulation of DNA-templated transcription ; response to heat ; response to hypoxia ; response to water ; response to xenobiotic stimulus" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MVLSDKKFVLVTGGSSGLGFETIKALIQTNQPYHVFLGCLFPDEGQSAVLSLQRDVPETPSTLESILVDVTDDESIDRCFHTVQSKIGHLDVLVNNAGISLQASEIGMREAWNRCYDVNVTGAQIMTHTFVPLLLRSNDPRLIFITSGLSSLTPMSNVYTPTRMTVPAGWPKPEVHPYRAYRATKTALNMVMLEWHWQLREDGVKTWGVSPGFLATNLGASFAGMDGAPPVLPASVGGRLVASVVEGDRDTDVGKIVLKDGEVQPF", - "output": "oxidoreductase activity" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MILEHVLVLSAYLFSIGIYGLITSRNMVRALMCLELILNAVNINFVTFSDFFDNRQLKGDIFSIFVIAIAAAEAAIGLAIVSSIYRNRKSTRINQSNLLNN", - "output": "chloroplast thylakoid membrane ; oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor ; quinone binding ; ATP synthesis coupled electron transport ; photosynthesis, light reaction" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MSAAVVTVRGLRRAFGAQQVLDALDLDIADGEFVAMLGLSGSGKSTLLRILAGLDHQADGSVVVPRSRAVVFQNPRLLPWRRALANVTFALADAGPDAPSRTARGRAALDEVGLADKADAWPLSLSGGEAQRVSLARALVREPDLLLLDEPFGALDALTRLKMYRLLHDLWARRHMAVLHVTHDVDEAILLADRVVVLSDGRVSLDRRVDLPFPRSRGDEGFDDLRRVLLAELGVREEVGHDRGR", - "output": "plasma membrane ; ATP binding ; ATP hydrolysis activity" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MPHESRVGRRRSTTPHHISDVAIELFAAHGFTDVSVDDIARAAGIARRTLFRYYASKNAIPWGDFSTHLAQLQGLLDNIDSRIQLRDALRAALLAFNTFDESETIRHRKRMRVILQTPELQAYSMTMYAGWREVIAKFVARRSGGKTTDFMPQTVAWTMLGVALSAYEHWLRDESVSLTEALGAAFDVVGAGLDRLNQ", - "output": "DNA binding" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MGFHQIDERNQALLSKIALDDGHGENSPYFDGWKAYDNDPFHPENNPLGVIQMGLAENQLSFDMIVDWIRKHPEASICTPEGLERFKSIANFQDYHGLPEFRNAIANFMGKVRGGRVKFDPSRIVMGGGATGASETVIFCLADPGDAFLVPSPYYAGFDRDLKWRTRAQIIRVHCNGSNNFQVTKAALEIAYKKAQEANMKVKGVIITNPSNPLGTTYDRDTLKTLVTFVNQHDIHLICDEIYSATVFKAPTFTSIAEIVEQMEHCKKELIHILYSLSKDMGLPGFRVGIIYSYNDVVVRRARQMSSFGLVSSQTQHLLAAMLSDEDFVDKFLAENSKRVGERHARFTKELDKMGITCLNSNAGVFVWMDLRRLLKDQTFKAEMELWRVIINEVKLNVSPGSSFHVTEPGWFRVCFANMDDNTVDVALNRIHSFVENIDKKEDNTVAMPSKTRHRDNKLRLSFSFSGRRYDEGNVLNSPHTMSPHSPLVIAKN", - "output": "1-aminocyclopropane-1-carboxylate synthase activity ; pyridoxal phosphate binding ; ethylene biosynthetic process ; fruit ripening" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MLIKLLTKVFGSRNDRTLRRMRKVVNIINAMEPEMEKLSDEELKGKTAEFRARLEKGEVLENLIPEAFAVVREASKRVFGMRHFDVQLLGGMVLNERCIAEMRTGEGKTLTATLPAYLNALTGKGVHVVTVNDYLAQRDAENNRPLFEFLGLTVGINLPGMPAPAKREAYAADITYGTNNEYGFDYLRDNMAFSPEERVQRKLHYALVDEVDSILIDEARTPLIISGPAEDSSEMYKRVNKIIPHLIRQEKEDSETFQGEGHFSVDEKSRQVNLTERGLVLIEELLVKEGIMDEGESLYSPANIMLMHHVTAALRAHALFTRDVDYIVKDGEVIIVDEHTGRTMQGRRWSDGLHQAVEAKEGVQIQNENQTLASITFQNYFRLYEKLAGMTGTADTEAFEFSSIYKLDTVVVPTNRPMIRKDLPDLVYMTEAEKIQAIIEDIKERTAKGQPVLVGTISIEKSELVSNELTKAGIKHNVLNAKFHANEAAIVAQAGYPAAVTIATNMAGRGTDIVLGGSWQAEVAALENPTAEQIEKIKADWQVRHDAVLAAGGLHIIGTERHESRRIDNQLRGRSGRQGDAGSSRFYLSMEDALMRIFASDRVSGMMRKLGMKPGEAIEHPWVTKAIANAQRKVESRNFDIRKQLLEYDDVANDQRRAIYSQRNELLDVSDVSETINSIREDVFKATIDAYIPPQSLEEMWDIPGLQERLKNDFDLDLPIAEWLDKEPELHEETLRERILAQSIEVYQRKEEVVGAEMMRHFEKGVMLQTLDSLWKEHLAAMDYLRQGIHLRGYAQKDPKQEYKRESFSMFAAMLESLKYEVISTLSKVQVRMPEEVEELEQQRRMEAERLAQMQQLSHQDDDSAAAAALAAQTGERKVGRNDPCPCGSGKKYKQCHGRLQ", - "output": "cytoplasm ; plasma membrane ; ATP binding ; metal ion binding ; protein-exporting ATPase activity ; intracellular protein transmembrane transport ; protein import ; protein targeting" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MNIYMTDEGKLLTEEQLKLVEAILVYTATEEKIEANSELSVTFVTNDEIQQINREWRGKDQATDVISFAMDELGEDEIDFELLEDEPVVLGDLIISVERCREQAAEYGNHFERELGFLAVHGFLHLLGYDHIEKADEDIMTKRQEEILHHFELYRGKL", - "output": "cytoplasm ; metalloendopeptidase activity ; RNA endonuclease activity ; zinc ion binding ; rRNA processing" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MRDPVSSQYSSFLFWRMPIPELDLSELEGLGLSDTSTYKIQDSSAAKMTGKAPGAEQEKNPEGDALLEYSTFNFWRAPIASIHSFELDLL", - "output": "cytosol ; microtubule organizing center ; nucleoplasm ; extrinsic apoptotic signaling pathway ; intrinsic apoptotic signaling pathway ; positive regulation of apoptotic process ; positive regulation of DNA-templated transcription ; positive regulation of mitochondrial depolarization ; positive regulation of release of cytochrome c from mitochondria" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MTYLLALDQGTSSSRSIVFDELGHIVAQAQQELPQIYPKPGWVEHDPMEIWRTQLATAREALGKAGLKASDIRALGITNQRETTVVWHRATGQPIHNAIVWQDRRAEATCAQLREQGKEALIQSKTGLLIDAYFSGTKLKWLLDNVPGVRAQAERGELAFGTIDSWLMWQLTGGALHATDVSNASRTMLFNVRTNQWDAELLDLLGIPASLMPQVLPSSAHYGETRPELLGHAIAIGGVAGDQQSALFGQACFKAGMAKNTYGTGCFMLMHTGTQFQTSHNGLLTTSAAQTTAHPEFAMEGSVFVGGAVVQWLRDGLHAIQGSGEVQALAQSVPDSGGVMMVPAFTGLGAPYWKPDARGTITGLTRGTTVAHIARAALESIAYQSAALLQAMSRDAVSSGAAPLAELRVDGGACANDLLMQFQADLLGIPVLRPAVIETTALGAAYLAGLSSGVYRSTDELSGMWRAERTFLPTLGADSAAALMNRWEHAVRQTVLP", - "output": "ATP binding ; glycerol kinase activity ; glycerol catabolic process ; glycerol metabolic process ; glycerol-3-phosphate metabolic process ; phosphorylation" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MTKLFTPLHVGRMELANRIAMAPMTRYRASDNHVPLPIMKDYYAQRASVPGTLLITEATTISARAGGYANAPGIYNDAQIAAWKEVTDAVHAKGSYIYVQLWAVGRPANPQLLQAEGGYDLVSSSATAVSADAPTPRALSETEIYAWIADYAQAARNAVAAGFDGVEIHAANGYLIDQFTQDICNTRTDAWGGSVQGRARFALEVSRAVVEAVGADRTGIRFSPWSTFQGMRMKDPKPQFEYLAVQTAKLGLAYVHLVESRIAGGADVDATDRLDFFLRAYGKASPVIFAGGYDAESAVRAVDVEYADYDAIVGIGRPFISNPDLPFRVQNGIPFVPYDRATFYVPKDPKGYTDYAFSAEFQKAIEAAA", - "output": "FMN binding ; oxidoreductase activity ; indole alkaloid biosynthetic process" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MQKKDILFSIGWPLSSLYAGIMKLRCLLYRRGLFRQHHFPVPVISVGNLTMGGTGKTPVTHYIAKLLLEHGLQPAIISRGYSGKSGGEVNIVSDGQRILLSAEQAGDEPYMLASMLAGVIVITGKKRYLSCKYAVEKMQAEVIILDDGFQHLAVARNLDLVLFDAQTGMGNNRVFPGGDLREARFALDRADAFLITGKCPREEEELLAIELELQHELPQCPLFSVYRTEGVFYSAKQEKVVTHLPKKVFAFCGIANPERFHHDLEKQGFSLVGFKAFSDHQQYTGQCIEEIVKEAKKGGAQAIITTDKDLVKIDSFATELPLYSARPRTTISTDFDELILKTCASFGE", - "output": "ATP binding ; tetraacyldisaccharide 4'-kinase activity ; lipid A biosynthetic process ; phosphorylation" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MPVGVPKVPFRSPGEEDATWVDIYNRLHRERLLFLGQEVEGEISNQIVGLMVYLSIEDDTRDLYLFINSPGGWVIPGIAIYDAMQFVPPDVHTICMGLAASMGSFVLAGGEITKRLAFPHARVMIHQPASSFYEAPAGEFILEAGELLKLRETITSVYVQRTGNPLWVVSEDMERDVFMSATEAQAHGIVDLIAVENTWDFP", - "output": "chloroplast thylakoid ; chloroplastic endopeptidase Clp complex ; endopeptidase Clp complex ; ATP-dependent peptidase activity ; ATPase binding ; serine-type endopeptidase activity ; chloroplast organization ; protein quality control for misfolded or incompletely synthesized proteins" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MADSKEIKRVLLSPLFDNNPIALQILGVCSALAVTTKLETALVMTLAVTLVTAFSSFFISLIRNHIPNSVRIIVQMVIIASLVIVVDQVLRAYAYEISKQLSVFVGLIITNCIVMGRAEAYAMKSPPIESFMDGIGNGLGYGVILVLVGFVRELVGSGKLFGVTVLETVQNGGWYLPNGLFLLAPSAFFIIGLLIWGLRTLKPAQIEKE", - "output": "plasma membrane ; oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor ; sodium ion transport" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MALKRIHKELNDLAQDPPAQCSAGPVGEDMFHWQATIMGPNDSPYQGGAFFLTIDFPTEYPFKPPKVEFTTRIYHPNVNSNGSICLDILRSQWSPALTISKVLLSISSLLCDPNPDDPLVPEIAQIYKTDRDKYNRTAREWTQKYAM", - "output": "nucleus ; ubiquitin ligase complex ; ATP binding ; ubiquitin conjugating enzyme activity ; ubiquitin protein ligase binding ; ubiquitin-protein transferase activity ; cellular response to arsenite(3-) ; cellular response to cadmium ion ; protein K11-linked ubiquitination ; protein K27-linked ubiquitination ; protein K29-linked ubiquitination ; protein K48-linked ubiquitination ; protein K6-linked ubiquitination ; protein K63-linked ubiquitination ; protein ubiquitination ; ubiquitin-dependent protein catabolic process" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MKVFYDKDCDLSLVKGKTVAIIGYGSQGHAHALNLHDSGVKVVVGLRKGGASWNKAANAGLEVAEVAEAVKRADIVMMLLPDENIAAVYRDEVHANIKAGAALAFAHGFNVHYGQVVPREDIDVIMAAPKAPGHTVRSTYSQGGGVPHLIAVYQDKSGSARDVALSYASANGGGRAGIIETNFREETETDLFGEQAVLCGGTVELIKAGFDTLVEAGYAPEMAYFECLHELKLIVDLIYEGGIANMNYSISNNAEFGEYETGPKVVTDATRQAMRECLTAIQTGEYAKKFILENAAGAPTLTSRRRINAESQIEQVGGKLRAMMPWIAANKLVDKAKN", - "output": "ketol-acid reductoisomerase activity ; magnesium ion binding ; NADP binding ; isoleucine biosynthetic process ; valine biosynthetic process" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MFGHFKLVYPAPISEPIQSRDSNAYMMETLRNSGLNLKNDFGIGRKIWRVFSFTYNMVILPVSFPINYVIHLAEFPPELLLQSLQLCLNTWCFALKFFTLIVYTHRLELANKHFDELDKYCVKPAEKRKVRDMVATITRLYLTFVVVYVLYATSTLLDGLLHHRVPYNTYYPFINWRVDRTQMYIQSFLEYFTVGYAIYVATATDSYPVIYVAALRTHILLLKDRIIYLGDPSNEGSSDPSYMFKSLVDCIKAHRTMLNFCDAIQPIISGTIFAQFIICGSILGIIMINMVLFADQSTRFGIVIYVMAVLLQTFPLCFYCNAIVDDCKELAHALFHSAWWVQDKRYQRTVIQFLQKLQQPMTFTAMNIFNINLATNINVAKFAFTVYAIASGMNLDQKLSIKE", - "output": "dendrite membrane ; membrane ; plasma membrane ; odorant binding ; olfactory receptor activity ; detection of chemical stimulus involved in sensory perception of smell ; sensory perception of smell ; signal transduction" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MKIGILALQGAFAEHAKVLDQLGVESVELRNLDDFQQDQSDLSGLILPGGESTTMGKLLRDQNMLLPIREAILSGLPVFGTCAGLILLAKEITSQKESHLGTMDMVVERNAYGRQLGSFYTEAECKGVGKIPMTFIRGPIISSVGEGVEILATVNNQIVAAQEKNMLVSSFHPELTDDVRLHQYFINMCKEKS", - "output": "glutaminase activity ; pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity ; glutamine catabolic process ; pyridoxal phosphate biosynthetic process" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MTTPHSIAESTDPEVFPANNRHLTVSYASRYPEYTRIPAITLKGQWLEDAGFTTGTQVDVRVMNGCIVLTAQQPQPEESELMQSLRQVSKLSARKQKQVQAFIDVMAGSK", - "output": "cytoplasm ; DNA binding ; RNA binding ; RNA endonuclease activity" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MRDLKTYLSVAPVLSTLWFGSLAGLLIEINRLFPDALTFPFF", - "output": "chloroplast thylakoid membrane ; photosystem I ; photosynthesis" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MSFSCPLCHQPLSREKNSYICPQRHQFDMAKEGYVNLLPVQHKRSRDPGDSAEMMQARRAFLDAGHYQPLRDAIVAQLRERLDDKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAIIRIYAPCKAEELARVVKPGGWVITATPGPRHLMELKGLIYNEVHLHAPHAEQLEGFTLQQSAELCYPMRLRGDEAVALLQMTPFAWRAKPEVWQTLAAKEVFDCQTDFNIHLWQRSY", - "output": "23S rRNA (guanine(745)-N(1))-methyltransferase activity ; methyltransferase activity ; rRNA (guanine-N1-)-methyltransferase activity ; zinc ion binding ; rRNA base methylation" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MSPQTETKTSVGFKAGVKDYKLTYYTPYYETKATDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYHIERVFGEKDQYIAYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPAYTKTFKGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETGEIKGHYLNATAGTCEEMLRRAYFAKELGVPIIMHDYLTGGFTANTSLAHFCRENGLLLHIHRAMHAVIDRQKNHGIHFRVLAKALRLSGGDHIHAGTVVGKLEGEREITLGFVDLLRDNFVEKDRSRGIYFTQDWVSLPGVLPVASGGIHVWHMPALTDIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGLDLAQDGNSIIRQASNWSPELAAACEVWKEIQFNFKSVDTLDLNEIK", - "output": "plastid ; magnesium ion binding ; monooxygenase activity ; ribulose-bisphosphate carboxylase activity ; photorespiration ; reductive pentose-phosphate cycle" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MEMLYGIMPEISLLLSALIFQLIGAYSNNTLTHVIAKMAIGFAAILIAILVFHPSWFNGIYWNNTFIVNQSKIYLKIIILIFYIFLTLIYSGYIKVANLKGHSEYIVLMQLGALGGLILVSANDFMVMYLGIEMQGIIGYILTTFNYNNSRSSEAGLKYFILGTVFSAIMLFGISLVYGTTQSIRYDIALHALQNPSSDMAVLVAAILMILVGVLFKLSIAPFHMWTPDIYDGAPLVVVALFSSLPKISVLALLGNLLSELKFASDAFFYIKTIIMVLACLSLIVGAFGALLQQSIQRFIAYSAILNLGYAVLALVANSSNVIRAEISYFYIIIYAASMLGFIAIIINNFTNRANYLKISHLSGLSNVKKLSSILIAIQMFSLVGIPPFAGFISKYIIFTSILKSGMYELIIMGIAAVVIGSYCYLNIVKVMYFLPATVRFQNSSVNFELSLVSIASTIIVISLMIICMLFGEGLNVIV", - "output": "plasma membrane ; NADH dehydrogenase (ubiquinone) activity ; quinone binding ; ATP synthesis coupled electron transport" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MADATHAAADGGVATILASADGRDFLLRNSADKVKISSIKASTVALYFSASWCPPCRRFTPKLIEAYNELVSQGKSFEVVFVSGDSDQDAFNAYFAKMPWLAVPFSDSEALAKLNERYKVMGIPHLVILDAKSGEIYTEDGVELVHEYGTEAYPFTTERINELKEQEKAAKDNQTIHSLFGTPTRDYLITNKGDKVPISDLEGKYVGLCFVVNGYGPVVQFTSVLAKIYEKLKAVGEKFEVVMVSLDGDEESFNESFADMPWLAIPQGDKMCEKLARYFELSGLPMLVLIGPDGKTLNDDIADIIDEHGPDAWEGFPFSAEKLEILAEKAKAKAESQTLESLLVTGDLDFVLGKDGAKVPVSELVGKTVLLYFSAKWCPPCRAFLPKLVNEYNKIKEKHNDFEIVFISSDREQSSYDEFFSGMPWLALPLGDERKQQLSKIFKITGIPSLVAIGPDGKTVTKDAKTPLVAHGADAFPFTEEKLQELEKEKEKKINDMAKGWPEKLKHDLHDHELVLTRCTTYGCDGCDEMGDSWSYRCKECDFDLHPKCALEEKGDVEMGEENAEAAPAGYVCEGDVCRKV", - "output": "thioredoxin-disulfide reductase activity" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "QLTFTPGW", - "output": "extracellular region ; hormone activity ; flight behavior ; neuropeptide signaling pathway" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MPTIQQLIRHGRSMKASKTASPALEKCPQKRGVCTRVYTTTPKKPNSALRKVARVRLSNKIEVTAYIPGEGHNLQEHSIVLIRGGRVKDLPGVRYHIVRGSLDTSGVADRKQSRSKYGAKQPKAGAAKK", - "output": "small ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; tRNA binding ; translation" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MAGAAALRRSARRVVLPGAYALSRALQHPERLLSSQASPDRGGVLGSELGLYPPERVRNFSIIAHVDHGKSTLADRLLELTGTIKKGHGQPQYLDKLQVERERGITVKAQTATMFYRHANNQLPASDQPDAPSYLLNLIDTPGHVDFSYEVSRSLAACQGALLVVDAAQGVQAQTIANFYLAFESNLSIIPVINKIDQPTADPDNVKAQLKRLFDIDPSEALLTSAKTGQGLSQVLPAVIERIPSPPGKCDSPVRMLLLDSYYDEYKGVICHVAVVDGALHKGDKIASAATGRTYEVLDVGIMHPELTPTGVLYTGQVGYVISGMRSTKEARIGDTLHQAKSIVEPLPGFKPARHMVFSGLYPADGSDFDALSHAIEKLTCNDASVSVTKETSTALGMGFRCGFLGLLHMDVFHQRLEQEHGAQVISTIPTVPYIFEYGDGSKVQVENPAALASNPGKRIAACWEPTVIATIIIPSEYVGPVIMLCSERRGEQQEYTFIDAQRALLKYRLPLREIIVDFYNELKSITSGYATFDYEDSEYQQSDLVKMDILLNGQPVDAMATIVHNQKAQRVGRELVDKLKKFIERQMFEITIQAAVGSKVIARETLSAMRKNVLAKCYGGDITRKKKLLEKQKEGKKRMKRVGSVDIPQEAFHELLKVSNSK", - "output": "mitochondrial inner membrane ; mitochondrial matrix ; mitochondrion ; GTP binding ; GTPase activity ; mitochondrial ribosome binding ; positive regulation of translation ; translation" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MMRSHYCGQLNETLEGQEITLCGWVHRRRDHGGVIFLDIRDRDGLAQVVFDPDRAESFAAADRVRSEYVVKITGKVRLRPAGAVNKNMASGGIEVLGYELEVLNESETPPFPLNEYSDVGEETRLRYRFLDLRRPEMAEKLRLRSRMTTSIRRFLDENGFLDVETPILTRATPEGARDYLVPSRTHAGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQPEFTQIDIETSFLDEKEIMGLTEQMIRNLFKEVLDLEFGDFPHMTFEEAMRRYGSDKPDLRNPLELVDVADQLKDVDFKVFSGPANDPKCRIAALRVPGGASMPRKQIDDYTKFVGIYGAKGLAYIKVNERANGVDGLQSPIVKNIPLDNLNAILDRVGAVDGDIVFFGADKAKIVSEALGALRIKLGHDLNLLTCEWAPMWVVDFPMFEENDDGSFSALHHPFTAPKCSPAELEANPAGALSRAYDMVLNGTELGGGSIRIHRKEMQQAVFRLLGINEAEQEEKFGFLLDALKYGAPPHGGLAFGLDRLVMLMTGAQSIREVIAFPKTQSAADVMTQAPGVVDAKALRELHIRLRETPKAE", - "output": "cytoplasm ; aspartate-tRNA ligase activity ; aspartate-tRNA(Asn) ligase activity ; ATP binding ; nucleic acid binding ; aspartyl-tRNA aminoacylation" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MAPGAPSSSPSPILAALLFSSLVLSPALAIVVYTDREIYGAVGSQVTLHCSFWSSEWVSDDISFTWRYQPEGGRDAISIFHYAKGQPYIDEVGAFKERIQWVGDPRWKDGSIVIHNLDYSDNGTFTCDVKNPPDIVGKTSQVTLYVFEKVPTRYGVVLGAVIGGILGVVLLLLLLFYLIRYCWLRRQAALQRRLSAMEKGRFHKSSKDSSKRGRQTPVLYAMLDHSRSTKAASEKKSKGLGESRKDKK", - "output": "basolateral plasma membrane ; lysosome ; plasma membrane ; rough endoplasmic reticulum ; cell aggregation ; cell-cell adhesion via plasma-membrane adhesion molecules ; cell-cell junction maintenance ; myelination ; negative regulation of apoptotic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MAPGSTMWLLGYIFLCFPVSFALIKQPKPETPTDPGVLHCRPWNFKFTINFQNQETGSSPVLVTWDNQGRLHRLQNDTDCGTRVGEGPGPSVVLEANYSSCYVTESEPYYVMLVGVEEVDAAGQNLVTKQQLLKCPMHLPAPDAGLCDSVPVQDRLPCATAPISQEDCEELGCCHSSEEVNACYYGNTVTSHCTQEGHFSIAVSRNVSSPPLHLDSVHLVFGNDSECQPVVATRAFVLFLFPFTACGTTRQITGDRAIYENELLATREVRTWSRGSITRDSIFRLRVSCSYSISSSALPVDMHVLTLPPPLPETQPGPLTVVLQIAKDKDYHSYYTMDDYPVVKLLRDPIYVDVSILYRTDPYLGLRLHQCWATPRTNPLYQPQWPILVKGCPYTGDNYQTQLIPVQEAFDLPFPSHHQRFSISTFSFLDSSVAKEALKGPIYLHCSVSVCQPTGTQSCTVTCPIDSRRRNSDINFQNSTANISSKGPMILLQATEDPSEKLHKHSGVPVHPGALWVAGLSGIFIIGALLVSYVAIRTRR", - "output": "egg coat ; extracellular region ; plasma membrane ; acrosin binding ; identical protein binding ; structural constituent of egg coat ; acrosomal vesicle exocytosis ; negative regulation of binding of sperm to zona pellucida ; positive regulation of acrosome reaction ; positive regulation of humoral immune response ; positive regulation of T cell proliferation" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MDFKRLTAFFAIALVIMIGWEKMFPTPKPVPAPQQAAQQQAVTASAEAALAPATPITVTTDTVQAVIDEKSGDLRRLTLLKYKATGDENKPFILFGDGKEYTYVAQSELLDAQGNNILKGIGFSAPKKQYSLEGDKVEVRLSAPETRGLKIDKVYTFTKGSYLVNVRFDIANGSGQTANLSADYRIVRDHSEPEGQGYFTHSYVGPVVYTPEGNFQKVSFSDLDDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSTWILQPKGRQSVCAAGECNIDIKRRNDKLYSTSVSVPLAAIQNGAKAEASINLYAGPQTTSVIANIADNLQLAKDYGKVHWFASPLFWLLNQLHNIIGNWGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKYGDDRMAQQQAMMQLYTDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWITDLSRADPYYILPIIMAATMFAQTYLNPPPTDPMQAKMMKIMPLVFSVMFFFFPAGLVLYWVVNNLLTIAQQWHINRSIEKQRAQGEVVS", - "output": "plasma membrane ; membrane insertase activity ; protein insertion into membrane ; protein transport" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MKEEVKGIPVRVALRCRPLVPKEISEGCQMCLSFVPGEPQVVVGTDKSFTYDFVFDPSTEQEEVFNTAVAPLIKGVFKGYNATVLAYGQTGSGKTYSMGGAYTAEQENEPTVGVIPRVIQLLFKEIDKKSDFEFTLKVSYLEIYNEEILDLLCPSREKAQINIREDPKEGIKIVGLTEKTVLVALDTVSCLEQGNNSRTVASTAMNSQSSRSHAIFTISLEQRKKSDKNSSFRSKLHLVDLAGSERQKKTKAEGDRLKEGININRGLLCLGNVISALGDDKKGGFVPYRDSKLTRLLQDSLGGNSHTLMIACVSPADSNLEETLNTLRYADRARKIKNKPIVNIDPQTAELNHLKQQVQQLQVLLLQAHGGTLPGSITVEPSENLQSLMEKNQSLVEENEKLSRGLSEAAGQTAQMLERIILTEQANEKMNAKLEELRQHAACKLDLQKLVETLEDQELKENVEIICNLQQLITQLSDETVACMAAAIDTAVEQEAQVETSPETSRSSDAFTTQHALRQAQMSKELVELNKALALKEALARKMTQNDSQLQPIQYQYQDNIKELELEVINLQKEKEELVLELQTAKKDANQAKLSERRRKRLQELEGQIADLKKKLNEQSKLLKLKESTERTVSKLNQEIRMMKNQRVQLMRQMKEDAEKFRQWKQKKDKEVIQLKERDRKRQYELLKLERNFQKQSNVLRRKTEEAAAANKRLKDALQKQREVADKRKETQSRGMEGTAARVKNWLGNEIEVMVSTEEAKRHLNDLLEDRKILAQDVAQLKEKKESGENPPPKLRRRTFSLTEVRGQVSESEDSITKQIESLETEMEFRSAQIADLQQKLLDAESEDRPKQRWENIATILEAKCALKYLIGELVSSKIQVSKLESSLKQSKTSCADMQKMLFEERNHFAEIETELQAELVRMEQQHQEKVLYLLSQLQQSQMAEKQLEESVSEKEQQLLSTLKCQDEELEKMREVCEQNQQLLRENEIIKQKLTLLQVASRQKHLPKDTLLSPDSSFEYVPPKPKPSRVKEKFLEQSMDIEDLKYCSEHSVNEHEDGDGDDDEGDDEEWKPTKLVKVSRKNIQGCSCKGWCGNKQCGCRKQKSDCGVDCCCDPTKCRNRQQGKDSLGTVERTQDSEGSFKLEDPTEVTPGLSFFNPVCATPNSKILKEMCDVEQVLSKKTPPAPSPFDLPELKHVATEYQENKAPGKKKKRALASNTSFFSGCSPIEEEAH", - "output": "axon cytoplasm ; chromosome ; cytoplasm ; cytosol ; membrane ; microtubule associated complex ; midbody ; nuclear matrix ; nucleoplasm ; spindle microtubule ; ATP binding ; DNA binding ; iron-sulfur cluster binding ; metal ion binding ; microtubule binding ; microtubule motor activity ; anterograde axonal transport ; mitotic cytokinesis ; mitotic spindle midzone assembly ; mitotic spindle organization ; organelle organization ; spindle elongation" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MRILLTNDDGIFAPGLEALRNALSDLAETIYIIAPDRERSATGHSITVHRPIRVREACHADGNCCGWIVDGTPADCVKLALESLLPETPDLVISGINLGPNLGTDVLYSGTVSAAMEGLINGVPSLAISLASHREAEFEEAAAFARRLLPLVFEYREIFTANTLLNINVPPGKPVGVRLTRLGNLRYADAVDRRVDPRGRYYYWMAGKPFSPDGHDPDTDIGAVKDRHISITPVKIDLTDYEALDALKKWPVDWKGS", - "output": "cytoplasm ; metal ion binding ; nucleotide binding ; XMP 5'-nucleosidase activity" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MPHNFRPGDLVFAKMKGYPHWPARIEDVADGAVKPPPNKIPIFFFGTHETAFLAPKDLFAYEKNQERFGKPNKRKGFNEGLWEIQNNPHASYNTPAAASSSDSEDNQPAAASDAEEEEEAVVPRKAETGSDDSDSGSEDQKKPAVKRKAPALKRPPVKKARASSSDRDGEESGSPSEPEPSPSSDSDSGKNSDQDFTPQKESGGRGGKKPAGRGRRKKASSGSDSDSGSQSDQKAARSDSEDEKPRPAASGSESQSGSKSDSDSEPPPPPPPTRKAPQGRKKAEKPPPKPRARKPKPAPERAPSSSSDSDSDSDTDRVSEWKKRDEERRKELEERRKREEAEELRRLREREKEEEEKRKKDKETKVRRGSSSSGSSSSDDEVDDHPLKKSKKPPPPPIPAPSDSDSPPPSELKKKKESQKGRQKKEKEVKEKKERPVKEKKPQRSEEKHKAKPKAEKPKRKPVRPPEKKVEKKKEPSPEEKLQKLHTDIKFALKVDNPDIEKCLQALDELSSVQVTTHILQKNADVIATLKKIRRYKASNAVMEKATAVYNKLKLQFIGKIETGKPKPNEKNQEEQDAQNTDDSKPVNGESEGERKDVSESESNSKPTDQDNPDENKSPNGIRPDPDEPADQLNDSTEADPTADADVKEDSREQDEQMSSES", - "output": "cytoplasm ; nucleus ; H3K27me3 modified histone binding ; H3K9me3 modified histone binding ; chromatin remodeling ; DNA recombination ; DNA repair ; muscle organ development ; positive regulation of double-strand break repair via homologous recombination" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MAKRKVARKRDKKNIPSGVAHIQATFNNTIVTITDPSGAVVSWSSAGVVGFKGSRKSTPFAAQLAAEDAAKKAMEHGMRNVEVYVKGPGSGRESALRALQGAGLNVVMLRDVTPVPHNGCRPRKRRRV", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MAELAKSAVLVSSCTDDLLGDAKQVVVGPNQEDLHSAEAVLNRYSTVGFQASNLARAFSICEMMLTPQSPSPSLMPTEGDQASESPVMVQPTLFVGVTANLFGTGCREAIRFLCTECVPLPNGVEPATPLDDMAGISCDGTGALKPSPCDSRALIHVLVVSGGAMEHDIRRACESYKLSRDGAEEEGEQFHHPVERDRSRSKGTDCHFGNVRYNSSGVASRNLFSCVMRCLVKRLAEAQRKEKANREAAPIPEAYYDVCSWAITPSTLWYMAGLWMADIFTEALQETGEVTDEKVASEEGLKRAKSTVLYWAARNGVPIFSPSLTDGDIMEFILTAGDTGVPLLQLDLVADIHRLNRLAMRSRRTGMMILGGGVVKHHVCNANLMRNGADYAVFLNNAQEFDGSDAGARPGEAVSWGKLRLDSTAVKVYSEVTIVFPLIVVHVFVAWVRMMRSKGKENIRS", - "output": "catalytic complex ; cytoplasm ; membrane ; deoxyhypusine synthase activity ; protein homodimerization activity ; peptidyl-lysine modification to peptidyl-hypusine ; protein heterotetramerization ; regulation of cytoplasmic translation ; spermidine metabolic process" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MTTQLEQAWELAKQRFAAVGIDVEEALRQLDRLPVSMHCWQGDDVSGFENPEGSLTGGIQATGNYPGKARNASELRTDLEQAMRLIPGPKRLNLHAIYLESDTPVSRDQIKPEHFKNWVEWAKANQLGLDFNPSCFSHPLSADGFTLSHADDSIRQFWIDHCKASRRVSAYFGEQLGTPSVMNIWIPDGMKDITVDRLAPRQRLLAALDEVISEKLNPAHHIDAVESKLFGIGAESYTVGSNEFYMGYATSRQTALCLDAGHFHPTEVISDKISAAMLYVPQLLLHVSRPVRWDSDHVVLLDDETQAIASEIVRHDLFDRVHIGLDFFDASINRIAAWVIGTRNMKKALLRALLEPTAELRKLEAAGDYTARLALLEEQKSLSWQAVWEMYCQRHDTPTGSEWLESVRAYEKAILSQRG", - "output": "cytoplasm ; L-rhamnose isomerase activity ; manganese ion binding ; rhamnose catabolic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MSLISKEELIKLAYSIRPRENEYKTILTNLDEYNKLTTNNNENKYLQLKKLNESIDVFMNKYKTSSRNRALSNLKKDILKEVILIKNSNTSPVEKNLHFVWIGGEVSDIALEYIKQWADINAEYNIKLWYDSEAFLVNTLKKAIVESSTTEALQLLEEEIQNPQFDNMKFYKKRMEFIYDRQKRFINYYKSQINKPTVPTIDDIIKSHLVSEYNRDETVLESYRTNSLRKINSNHGIDIRANSLFTEQELLNIYSQELLNRGNLAAASDIVRLLALKNFGGVYLDVDMLPGIHSDLFKTISRPSSIGLDRWEMIKLEAIMKYKKYINNYTSENFDKLDQQLKDNFKLIIESKSEKSEIFSKLENLNVSDLEIKIAFALGSVINQALISKQGSYLTNLVIEQVKNRYQFLNQHLNPAIESDNNFTDTTKIFHDSLFNSATAENSMFLTKIAPYLQVGFMPEARSTISLSGPGAYASAYYDFINLQENTIEKTLKASDLIEFKFPENNLSQLTEQEINSLWSFDQASAKYQFEKYVRDYTGGSLSEDNGVDFNKNTALDKNYLLNNKIPSNNVEEAGSKNYVHYIIQLQGDDISYEATCNLFSKNPKNSIIIQRNMNESAKSYFLSDDGESILELNKYRIPERLKNKEKVKVTFIGHGKDEFNTSEFARLSVDSLSNEISSFLDTIKLDISPKNVEVNLLGCNMFSYDFNVEETYPGKLLLSIMDKITSTLPDVNKNSITIGANQYEVRINSEGRKELLAHSGKWINKEEAIMSDLSSKEYIFFDSIDNKLKAKSKNIPGLASISEDIKTLLLDASVSPDTKFILNNLKLNIESSIGDYIYYEKLEPVKNIIHNSIDDLIDEFNLLENVSDELYELKKLNNLDEKYLISFEDISKNNSTYSVRFINKSNGESVYVETEKEIFSKYSEHITKEISTIKNSIITDVNGNLLDNIQLDHTSQVNTLNAAFFIQSLIDYSSNKDVLNDLSTSVKVQLYAQLFSTGLNTIYDSIQLVNLISNAVNDTINVLPTITEGIPIVSTILDGINLGAAIKELLDEHDPLLKKELEAKVGVLAINMSLSIAATVASIVGIGAEVTIFLLPIAGISAGIPSLVNNELILHDKATSVVNYFNHLSESKKYGPLKTEDDKILVPIDDLVISEIDFNNNSIKLGTCNILAMEGGSGHTVTGNIDHFFSSPSISSHIPSLSIYSAIGIETENLDFSKKIMMLPNAPSRVFWWETGAVPGLRSLENDGTRLLDSIRDLYPGKFYWRFYAFFDYAITTLKPVYEDTNIKIKLDKDTRNFIMPTITTNEIRNKLSYSFDGAGGTYSLLLSSYPISTNINLSKDDLWIFNIDNEVREISIENGTIKKGKLIKDVLSKIDINKNKLIIGNQTIDFSGDIDNKDRYIFLTCELDDKISLIIEINLVAKSYSLLLSGDKNYLISNLSNTIEKINTLGLDSKNIAYNYTDESNNKYFGAISKTSQKSIIHYKKDSKNILEFYNDSTLEFNSKDFIAEDINVFMKDDINTITGKYYVDNNTDKSIDFSISLVSKNQVKVNGLYLNESVYSSYLDFVKNSDGHHNTSNFMNLFLDNISFWKLFGFENINFVIDKYFTLVGKTNLGYVEFICDNNKNIDIYFGEWKTSSSKSTIFSGNGRNVVVEPIYNPDTGEDISTSLDFSYEPLYGIDRYINKVLIAPDLYTSLININTNYYSNEYYPEIIVLNPNTFHKKVNINLDSSSFEYKWSTEGSDFILVRYLEESNKKILQKIRIKGILSNTQSFNKMSIDFKDIKKLSLGYIMSNFKSFNSENELDRDHLGFKIIDNKTYYYDEDSKLVKGLININNSLFYFDPIEFNLVTGWQTINGKKYYFDINTGAALTSYKIINGKHFYFNNDGVMQLGVFKGPDGFEYFAPANTQNNNIEGQAIVYQSKFLTLNGKKYYFDNNSKAVTGWRIINNEKYYFNPNNAIAAVGLQVIDNNKYYFNPDTAIISKGWQTVNGSRYYFDTDTAIAFNGYKTIDGKHFYFDSDCVVKIGVFSTSNGFEYFAPANTYNNNIEGQAIVYQSKFLTLNGKKYYFDNNSKAVTGLQTIDSKKYYFNTNTAEAATGWQTIDGKKYYFNTNTAEAATGWQTIDGKKYYFNTNTAIASTGYTIINGKHFYFNTDGIMQIGVFKGPNGFEYFAPANTDANNIEGQAILYQNEFLTLNGKKYYFGSDSKAVTGWRIINNKKYYFNPNNAIAAIHLCTINNDKYYFSYDGILQNGYITIERNNFYFDANNESKMVTGVFKGPNGFEYFAPANTHNNNIEGQAIVYQNKFLTLNGKKYYFDNDSKAVTGWQTIDGKKYYFNLNTAEAATGWQTIDGKKYYFNLNTAEAATGWQTIDGKKYYFNTNTFIASTGYTSINGKHFYFNTDGIMQIGVFKGPNGFEYFAPANTDANNIEGQAILYQNKFLTLNGKKYYFGSDSKAVTGLRTIDGKKYYFNTNTAVAVTGWQTINGKKYYFNTNTSIASTGYTIISGKHFYFNTDGIMQIGVFKGPDGFEYFAPANTDANNIEGQAIRYQNRFLYLHDNIYYFGNNSKAATGWVTIDGNRYYFEPNTAMGANGYKTIDNKNFYFRNGLPQIGVFKGSNGFEYFAPANTDANNIEGQAIRYQNRFLHLLGKIYYFGNNSKAVTGWQTINGKVYYFMPDTAMAAAGGLFEIDGVIYFFGVDGVKAPGIYG", - "output": "extracellular region ; host cell cytosol ; host cell endosome membrane ; host cell plasma membrane ; membrane ; cysteine-type peptidase activity ; glycosyltransferase activity ; inositol hexakisphosphate binding ; lipid binding ; manganese ion binding ; metal ion binding ; peptidase activity ; toxin activity ; UDP-glucosyltransferase activity ; modulation by symbiont of host Rho protein signal transduction ; negative regulation of GTPase activity ; positive regulation of actin filament depolymerization ; protein autoprocessing ; protein O-linked glycosylation via threonine ; proteolysis" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MRSISVLGATGSVGESAFDLLMGAGGPERFRTVALTGGANVARLAQMARALRAELAVTAWPERLADLRAALAGSGIEAAAGPQAVAEAAARPADWTLSAIVGAAGLPPGLEVLNRGGTLALANKETLVAAGPLVMARARETGARILPVDSEHSAIFQALHGENLDSVEHVTITASGGAFRDWPLERLARATVAEASRHPNWDMGQRITIDSASMFNKALEVIEAHEFFGLGVDRLRVLVHPQSIIHAMVTHRDGGSIAHLGAPDMRHAIGYALNWPARAALPVPALDLAALGSLTFAQPDEVRWPALRLAREAIGAGGAAGAVLNAAKEQALDDFIAGRIRFTDMAPAVEHALALAAREAGFAQSPRDLGEVLHWDDFARRAAAQWQGAA", - "output": "1-deoxy-D-xylulose-5-phosphate reductoisomerase activity ; metal ion binding ; NADPH binding ; isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway ; terpenoid biosynthetic process" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MEQEVNRGLPSTFLTFHSSSFVELLKEYDPTLLPAKRAAETFGEAPHGTTIVAATFAGGVLLAGDRRTTMGNLIAGRDVDKLTITDDYSAVGFAGTVGISIDMTRLFVVELEHYEKIEGVPLSLEGKSNRLAAIVKGNLPMANAGMVSIPLFIGYDLEASDPARAGRIVSFDAIGARYEEKSGYQSIGSGSPFAKSSLKKLHDPGSDDAATLSALIEALYDAADDDSATGGPDMVRRIFPTAIRITAEGAYRYTEEELAAVADAVVARRSADEPGVRSFTAS", - "output": "cytoplasm ; proteasome core complex, beta-subunit complex ; threonine-type endopeptidase activity ; modification-dependent protein catabolic process ; proteasomal protein catabolic process" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MSKKSQLVFAMVAGELSGDILGAGLMAALQKSHPDARFVGIGGPRMEALGFESLFAMEELAVMGIVEVLSRLPRLLKVRASLIKDITALKPDCFIGIDAPDFNIGLELKLKARGIKTVHYVSPSVWAWRPKRIFKIAKATHMVLSLLPFEKAFYDKHQVPCTFVGHTLADDIPLRSDKAAARQLLELDADAEYLAILPGSRGGELKQLAEPFVKAALLIKENFPDIRFVTPLVNQKRRDQFEQALKDHAPDLEIHMVEGKSREVMTAADGILLASGTATLEAMLVKRPMVVAYRVSPLTYRIAKSMMQVNRFSLPNLLAGKDVVPELIQDDCTPEKIAAAVTVELNRDFAPLNAEFERLHQMLRCDASQKAADAVMRLVETKEG", - "output": "lipid-A-disaccharide synthase activity ; lipid A biosynthetic process" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MALYSISKPVGSKINKHSYQDENTLVGKQALSKGTEKTKLSTNFEINLPRRTVLSDVSNVGKNNADEKDTKKAKRSFDESNLSTNEEADKPVESKFVKKLKVYSKNADPSVETLQKDRVSNVDDHLSSNPLMAEEYAPEIFEYIRKLDLKCLPNPKYMDQQKELTWKMREILNEWLVEIHSNFCLMPETLYLAVNIIDRFLSRRSCSLSKFQLTGITALLIASKYEEVMCPSIQNFVYMTDGAFTVEDVCVAERYMLNVLNFDLSYPSPLNFLRKISQAEGYDAQTRTLGKYLTEIYLFDHDLLRYPMSKIAAAAMYLSRRLLRRGPWTPKLVESSGGYEEHELKEIAYIMLHYHNKPLEHKAFFQKYSSKRFLKASIFVHQLVRQRYSVNRTDDDDLQSEPSSSLTNDGH", - "output": "chromatin ; cyclin-dependent protein kinase holoenzyme complex ; cytoplasm ; mitotic spindle pole body ; nucleus ; spindle pole body ; cyclin-dependent protein serine/threonine kinase activator activity ; cyclin-dependent protein serine/threonine kinase regulator activity ; cell division ; DNA recombination ; G1/S transition of mitotic cell cycle ; mitotic cell cycle phase transition ; mitotic G1 cell size control checkpoint signaling ; negative regulation of conjugation with cellular fusion ; positive regulation of G1/S transition of mitotic cell cycle ; regulation of cell cycle switching, mitotic to meiotic cell cycle ; regulation of cyclin-dependent protein serine/threonine kinase activity ; traversing start control point of mitotic cell cycle" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MSIHSASPIIRRKSRKIWVGNVPVGGDAPIAVQSMTNTETCDVAATVAQIRRLEDAGADIVRVSVPDMDAAEAFGKIKQQVNVPLVADIHFDYRIALRVAELGVDCLRINPGNIGREDRVKAVVDAARERNIPIRIGVNAGSLEKDLQKKYGEPTPEALLESAMRHVDHLDKLDFQNFKVSVKASDVFMAVAAYRLLARQIEQPLHLGITEAGGLRSGTVKSAVGLGMLLAEGIGDTIRISLAADPVEEIKVGFDILKSLHLRSRGINFIACPSCSRQNFDVVKTMNELEGRLEDLLVPMDVAVIGCVVNGPGEAKEAHVGLTGGTPNLVYIDGKPSQKLTNDNLVDELERLIRQKAAEKAEADASLIARG", - "output": "4 iron, 4 sulfur cluster binding ; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity ; iron ion binding ; isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway ; terpenoid biosynthetic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MGDRLTGLHAPTTEAGAASADHTAVVRPGFRDTAKAYVEVTKPISVGLLAFTAAAMMVVAGATHPVSGWLFVQALLAVVLACAGANAVSCYVDRDMDAQMGRTRRRPVPSGRISPPARALYWGLFLFVASLGLAWNLNPIAWITLWGGMLGYVVVYSLWLKRRSVWNIVIGGVSGGMPALFGWAAVTGEISLLPVLIAALVVLWIPNHIWSLAIFYREEYARVKVPMLPVVYELRRALNWLLLTVVLMVVFSVLIYFVGDWGLVYLATALVMGAAALALSVHIYRNPERRKAWVLFKFSSPYLAVLFLSMMVDVWLR", - "output": "plasma membrane ; protoheme IX farnesyltransferase activity ; heme O biosynthetic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MIDYVSGTLVDKTTDSALVDVNGLGYRVHVPTSTYKRLPDTDEEVTLHTYHYLREDDESLYGFATKAERTVFETMTGVSRVGPKLALSALSAMTPTELRDHVMEGDKSRLTQISGVGTKTADRLIVELRDRLADLDVLEDTSPLSGGSDARAEARADALEALTELGLSKADAERSIRQVLRDNAGIQSADELVRRALKADQE", - "output": "cytoplasm ; Holliday junction helicase complex ; ATP binding ; DNA binding ; four-way junction helicase activity ; DNA recombination ; DNA repair ; SOS response" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MEARTTDLSDLYPEGEALPMVFKSFGGRARFAGRVRTLRVFEDNALVRKVLEEEGAGQVLFVDGGGSLRTALLGGNLARLAWERGWAGVVVHGAVRDTEELRGVPIGLLALAATPKKSAKEGKGEVDVPLKVLGVEVLPGSFLLADEDGLLLLPEPPSGVRSGG", - "output": "4-hydroxy-4-methyl-2-oxoglutarate aldolase activity ; metal ion binding ; oxaloacetate decarboxylase activity ; ribonuclease inhibitor activity ; regulation of RNA metabolic process" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MARNAPAFWQTRSLAARLLLPLSGLFLLLAAVRRQLFRLGIRRAVRLPVPVVVVGNIAVGGSGKTPVVEWLVARLRDAGFTPGIVSRGYGGKAPGAVIVPPHGDVRLFGDEPVLLARLTACPVAVGADRPAAARALLQAYPGCDVIVADDGLQHYPLARDVEIAVVDERTLGNRWLLPAGPLREGPGRLRDVDIIIAHGALSPALSSLLDGRPVFAMHLEGSEFRRLDGAGCRNAEAFRGVRVHAVAGIGRPERFFAQLTRMGLEVVPHPFPDHHPFTAADLDFAPGEPKILTSKDAVKCASFASADTWEFPVKAHIAAGAAERILEKLTHGRPTA", - "output": "ATP binding ; tetraacyldisaccharide 4'-kinase activity ; lipid A biosynthetic process ; phosphorylation" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MFELNNFDALQIGLASPEKIREWSRGEVKKPETINYRTLKPERDGLFCERIFGPTKDWECHCGKYKRVRYKGIVCDRCGVEVTKSKVRRERMGHIELAAPVSHIWYFKGIPSRMGLMLDMSPRSLEKVLYFASYIVIDPKETPLLKKQLLNEKEYREAIENYGEEGFVAGMGAESVQKLLEEIDLNQVSKELKEALKTSTGQKKIRLIRRLEAVESFRKSSNRPDWMIIDVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKKLLDLGAPDIIVRNEKRMLQEAVDALIDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKMYQCGLPKEMALELFKPFVMKKLVQGGLSHNIKSAKRMVERVQSEVWDVLEEVISDHPVLLNRAPTLHRLGIQAFQPVLVEGRAIKLHPLVCTAYNADFDGDQMAVHLPLSVEAQAEARFLMLAAHNILKPSDGKPVCVPTQDMVLGSYYLTLDKENAIGEGRIFSSPEEAIMAYQIGDIDIHAHIKVRISKEVDGEEVCGIIDCTPGKLIFNESIPQDLGFVDRSVPGNEVKLEVDFLINKSSLGKLINKCYMKHGPTKTSIMLDKIKEKGYHYSTIGAITVSTSDMVVPEAKKRLLAETDVEVNKIDKMYRRGFISEDERYERVIEKWTKTTDLVADELMKNLDRFNPIFMMADSGARGSKSQIKQLAGMRGLMANPSGKIIELPIRASFREGLDVSEYFISTHGARKGNADTALKTADSGYLTRRLVDVSQDVIVREEDCGSKEGFEISEIREGNEIIEPLSERLTGRYSAEDIIDPNTGEILVKKEEYIDGEKAEEVEKSGVKKIKIRSVFTCKSKHGVCAKCYGMNMATAEKINIGESVGIIAAQSIGEPGTQLTMRTFHTGGVAGSDITQGLPRVEELFEARKPKGLAIVSEINGTIRIDETKKKRTVVVIGETEEISYDIPFGSRLKVSNGDVISAGDEITEGSVNPHDVLRIKGPNGVKNYLLSEVQKVYRLQGVDINDKHLEVVVRQMTRKIKIEESGDTEFLPGTMVDIFDFQEENAKAEEEGKETAKGRITLLGITKAALATDSFLSSASFQETTRVLTDAAIKGKVDPLLG", - "output": "DNA-directed RNA polymerase complex ; DNA binding ; DNA-directed 5'-3' RNA polymerase activity ; magnesium ion binding ; zinc ion binding ; DNA-templated transcription" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MWVSWAPGLWLLGLWATFGHGANTGAQCPPSQQEGLKLEHSSSLPANVTGFNLIHRLSLMKTSAIKKIRNPKGPLILRLGAAPVTQPTRRVFPRGLPEEFALVLTLLLKKHTHQKTWYLFQVTDANGYPQISLEVNSQERSLELRAQGQDGDFVSCIFPVPQLFDLRWHKLMLSVAGRVASVHVDCSSASSQPLGPRRPMRPVGHVFLGLDAEQGKPVSFDLQQVHIYCDPELVLEEGCCEILPAGCPPETSKARRDTQSNELIEINPQSEGKVYTRCFCLEEPQNSEVDAQLTGRISQKAERGAKVHQETAADECPPCVHGARDSNVTLAPSGPKGGKGERGLPGPPGSKGEKGARGNDCVRISPDAPLQCAEGPKGEKGESGALGPSGLPGSTGEKGQKGEKGDGGIKGVPGKPGRDGRPGEICVIGPKGQKGDPGFVGPEGLAGEPGPPGLPGPPGIGLPGTPGDPGGPPGPKGDKGSSGIPGKEGPGGKPGKPGVKGEKGDPCEVCPTLPEGFQNFVGLPGKPGPKGEPGDPVPARGDPGIQGIKGEKGEPCLSCSSVVGAQHLVSSTGASGDVGSPGFGLPGLPGRAGVPGLKGEKGNFGEAGPAGSPGPPGPVGPAGIKGAKGEPCEPCPALSNLQDGDVRVVALPGPSGEKGEPGPPGFGLPGKQGKAGERGLKGQKGDAGNPGDPGTPGTTGRPGLSGEPGVQGPAGPKGEKGDGCTACPSLQGTVTDMAGRPGQPGPKGEQGPEGVGRPGKPGQPGLPGVQGPPGLKGVQGEPGPPGRGVQGPQGEPGAPGLPGIQGLPGPRGPPGPTGEKGAQGSPGVKGATGPVGPPGASVSGPPGRDGQQGQTGLRGTPGEKGPRGEKGEPGECSCPSQGDLIFSGMPGAPGLWMGSSWQPGPQGPPGIPGPPGPPGVPGLQGVPGNNGLPGQPGLTAELGSLPIEQHLLKSICGDCVQGQRAHPGYLVEKGEKGDQGIPGVPGLDNCAQCFLSLERPRAEEARGDNSEGDPGCVGSPGLPGPPGLPGQRGEEGPPGMRGSPGPPGPIGPPGFPGAVGSPGLPGLQGERGLTGLTGDKGEPGPPGQPGYPGATGPPGLPGIKGERGYTGSAGEKGEPGPPGSEGLPGPPGPAGPRGERGPQGNSGEKGDQGFQGQPGFPGPPGPPGFPGKVGSPGPPGPQAEKGSEGIRGPSGLPGSPGPPGPPGIQGPAGLDGLDGKDGKPGLRGDPGPAGPPGLMGPPGFKGKTGHPGLPGPKGDCGKPGPPGSTGRPGAEGEPGAMGPQGRPGPPGHVGPPGPPGQPGPAGISAVGLKGDRGATGERGLAGLPGQPGPPGHPGPPGEPGTDGAAGKEGPPGKQGFYGPPGPKGDPGAAGQKGQAGEKGRAGMPGGPGKSGSMGPVGPPGPAGERGHPGAPGPSGSPGLPGVPGSMGDMVNYDEIKRFIRQEIIKMFDERMAYYTSRMQFPMEMAAAPGRPGPPGKDGAPGRPGAPGSPGLPGQIGREGRQGLPGVRGLPGTKGEKGDIGIGIAGENGLPGPPGPQGPPGYGKMGATGPMGQQGIPGIPGPPGPMGQPGKAGHCNPSDCFGAMPMEQQYPPMKTMKGPFG", - "output": "collagen type IX trimer ; collagen type XVI trimer ; collagen-containing extracellular matrix ; endoplasmic reticulum lumen ; extracellular matrix ; extracellular region ; extracellular space ; extracellular matrix structural constituent ; extracellular matrix structural constituent conferring tensile strength ; integrin binding ; cell adhesion ; cell adhesion mediated by integrin ; cellular response to amino acid stimulus ; extracellular matrix organization ; female pregnancy ; integrin activation ; integrin-mediated signaling pathway ; positive regulation of focal adhesion assembly" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MSSSARKLAPLPRVFVVGVGMTKFVKPGTEDARDYPDMAKEAGQKALADAQIPYSAVEQACIGYVYGDSTCGQRAVYHSLGLTGIPIINVNNNCSTGSTALFMGRQLIQGGMAECVLALGFEKMERGSLGAKFPDRTNPMDKHLDVLINKYGLSAHPVAPQMFGSAGKEHMEKYGTKIEHFAKIGWKNHKHSVNNPYSQFQKEYSLDEVMSSRPIFDFLTVLQCCPTSDGAAAAILASEEFVKKYGLQSKAVEILAQEMVTDFPSSFEEKSIIKMVGFDMSKEAARRCYEKSGLRPSDIDVIELHDCFSANELLTYEALGLCPEGKGGALVDRGDNTYGGKWVINPSGGLISKGHPLGATGLAQCAELCWQLRGEAGKRQVPGAKVALQHNLGLGGAAVVTLYKMGFPEAASSFRTHQIEAAPTSSAGDGFKANLVFKEIEKKLEEEGEQFVKKIGGIFAFKVKDGPGGKEATWVVDVKNGKGSVLPNSDKKADCTITIADSDLLALMTGKMNPQSAFFQGKLKITGNMGLAMKLQNLQLQPGKAKL", - "output": "cytoplasm ; endoplasmic reticulum ; mitochondrion ; peroxisomal matrix ; peroxisome ; acetyl-CoA C-acyltransferase activity ; acetyl-CoA C-myristoyltransferase activity ; cholesterol transfer activity ; lipid binding ; phosphatidylcholine transfer activity ; propanoyl-CoA C-acyltransferase activity ; propionyl-CoA C2-trimethyltridecanoyltransferase activity ; bile acid metabolic process ; fatty acid beta-oxidation ; intracellular cholesterol transport ; lipid transport ; regulation of phospholipid biosynthetic process" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MPATILIGAQWGDEGKGKATDLLAKDIDYVVKFNGGNNAGHTVVIGGDKYVLHLLPSGILNENVVPVIANGVVINPEVLFDEIATLNSRGVNTDKLVISANAHIIAPFHRTIDLVTERFLGKRQLGTTGRGIGPTYADKINRIGIRVQDLFDKSVLRQKIEGSLSNKNHMLVKVFNRRSVSVTEMLDYLLSFAERMRPMIADTSLLLNNALDCGKHVLFEGGQATMLDVDHGSYPFVTSSNATVGGAITGAGIGPTRVNKVIGVAKSYTTRVGAGPFPTELHDEYGEWLQKRGYEVGATTGRKRRCGWFDGVVARYATRINGITDYVLTKLDVLTGLDRIPICVGYKVGDSVFREMPVSQSDFHHAVPIYEDLPGWQCNISECESFDSLPPEARGYVLALEDLIKARISVIGTGPERENIIIRHPLGIF", - "output": "cytoplasm ; adenylosuccinate synthase activity ; GTP binding ; magnesium ion binding ; 'de novo' AMP biosynthetic process" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MSGTLVLVRHGQSEWNLKNLFTGWRDPDLTELGVEEAKAGGAALAEYGIKFDIAFTSVLVRAQRTCQMVLDAVGQSSLETICDQALNERDYGDLSGLNKDDARAKWGEEQVHIWRRSYDVPPPGGESLRDTGARVWPYYLTEILPRVLAGEKVLVAAHGNSLRSLVMVLDRLTKEQVLNLNLATGVPMVYKLKADSTVASKEVLGDMSAAH", - "output": "2,3-bisphosphoglycerate-dependent phosphoglycerate mutase activity ; gluconeogenesis ; glycolytic process" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MGQKVNPIGLRLGINRTWDSRWFANKGEYSKLLHEDMRIREVLMKNLKQAAVSKIIIERPHKKCRVTIHSARPGVVIGKKGADIDKIRKLVSKLTDSEVVINIVEVRKPEIDATLVADSIAQQLERRVAFRRAMKRAVQSAIRLGAEGIRINCSGRLGGAEIARLEWYREGRVPLHTLRADVDYGVATAHTAYGTCGIKVWIFKGEILEHDPMAQDRKMAELDHAGGGGGGERRRRERDAA", - "output": "ribonucleoprotein complex ; ribosome ; mRNA binding ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MAKVIGIDMGTTNSCVAVMDGKNAKVIENAEGARTTPSIIAFTDGDERLAGQPAKRQAVTNPEGTLFAVKRLIGRRYDDPMVTKDKDLVPYKIVKGDNGDAWVEVHGKKYSPSQISAMILQKMKETAESYLGETVTQAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKSEGKTIAVYDLGGGTFDVSVLEIGDGVFEVKSTNGDTFLGGEDFDIRLVEYLVAEFKKESGIDLKNDKLALQRLKEAAEKAKIELSSSQQTEINLPFITADQTGPKHLAIKLSRAKFESLVDDLVQRTVEPCKAALKDAGLKAGEIDEVVLVGGMTRMPKIQEVVKAFFGKEPHKGVNPDEVVAMGAAIQGGVLQGDVKDVLLLDVTPLSLGIETLGGVFTRLIERNTTIPTKKSQTFSTAEDNQSAVTIRVFQGEREMAADNKLLGQFDLVGIPPAPRGVPQIEVTFDIDANGIVNVSAKDKGTGKEHQIRIQASGGLSDADIEKMVKDAEANAEADKKRRESVEAKNQAESLVHSTEKSLAEYGDKVSADDKKAIEDAIAALKTSLEGEDAEDIKAKTQALAEVSMKLGQAMYEAAQAAEGAGAEGGEQASSSKDDVVDADYEEIDDNKKSS", - "output": "ATP binding ; ATP-dependent protein folding chaperone ; unfolded protein binding" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MMAAKREHADCGAEPARKRVKENYKRVTGKLLSKMTISLENHLYYTFTFRLLNENKTEAYYGNLQCFKDLVEQECYDVSLNFVKTKYNERIEINEYSKCDAAIDENVAVKLCLTRADFENEEIVNVLAKLKCVFKRLGANNYKMVFDINMQDAGGAVFVQQVECFANLKVLASAAKAFVKSPDNFNSLMDFYYKNTNTLFYVHGVRCQHTSKGQNEFLNWTAGPSTSLETPSNTDNEDYINLVHSHSTNNISRANKHLKSMQLSLFKAEQKINDNGKHSFSVQFKTLDSMDDDDDTKWHKCVYYVDSNGNKEDPNDTNAVQKLAMDFDQLATCLADKLTKATIFVTADNADASTMNLLGLLKHDDEECEYQFL", - "output": "host cell nucleus ; DNA binding ; regulation of DNA-templated transcription ; viral genome replication" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MTKGILGEKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAIQVGFDDKREVLSNKPAKGHVAKANTAPKRFIREFKNIEGLEVGAEITVDIFAAGDVVDVTGTSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVSPNRVFKNKHLAGRMGGNRVTIQNLEIVQVIPEKNVILIKGNVPGAKKSLITIKSAVKAAK", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MQSKFLWIAAASAATAAAQVPARLCGTAQPTMDDLVIAAGLAAEGKDNRRGLHPEDPIVVPTLFHVLAINETVAGGYLTEKSLQDQLDVMNADFGPSNVIFNLTATTRTVNRRWAQDLDEIPMRRALRQGGQETLNIYFMPYVSGYLGYCTFPNFWDAGSDEFIYDGCAVLSDSLPGGSLARYNLGRTATHEIGHWFDLFHTFSGGCGCVGDMIHDTPAMLNATGGCPVGKDTCPDRPGLDPIHNYMDYSDDACMNEFTPGQNFRMRSAWYNIRTK", - "output": "extracellular region ; metal ion binding ; metallopeptidase activity ; proteolysis" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MIPNHILILGSPNSGKLRVSKLISNDKDFPEIKENESHSGIIIKTSLSTKYYHIKLNILIDEYPEERNKSVTDEEKLLELEKWFNEFKSEEFGELREVLDGLVFTVNMKADSLEFIEKALETVSEIRTSLGDEESQWDGFISIIGSTTQGESVDDDTVEEIEDLVITHGFEFINLNTQGINEFKEKQGKDRVVELIESHEWTNMELLKVNPDQYEKNKMNKVEQMKQNLLEEKESMDLDVVFSKLSVAKERAEDMTQEQKEKYANEIIEEIIDFI", - "output": "vesicle-mediated transport" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MPNKEVLDNASLQRALTRITYEIIERNKGGKNLVLVGIKTRGEYLARRIADRLEQLEGVQIPVMAIDITNFRDDKPDQHNDLGLNSEERLNISEQNIVLIDDVLFTGRTIRAALDALIHIGRPKTISLAVLVDRGHRELPIRADFVGKNIPTAQNEKIKVFVQEIDGKDAVEIVH", - "output": "RNA binding ; uracil phosphoribosyltransferase activity ; DNA-templated transcription termination" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MAQEGGAVEQFGQWLWSNPIEQDPDDEMVDAREEEGQILYLDQQAGLRYSYSQSTTLKPTPPGQSNSAPVYRNAQRFQTEYLSPTTVTRSQVSVLSLSHTRPQLRPALSLLNSTPRANNQPWVATLIPSQSAGPPQRSSEPKRLTGRNSRNQR", - "output": "transport of virus in host, cell to cell" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MSSAIETKKVVVEEITSKLKESKSTIIVDYRGLNVAEVTELRKQLREANVEFKVYKNTMTRRAVEQAELDGLNDFLTGPNAIAFSTEDVVAPAKVLNEFAKKHEALEIKAGVIEGKVSTVEEVKALAELPSREGLLSMLLSVLQAPVRNLALATKAVAEQKEEQGA", - "output": "large ribosomal subunit ; large ribosomal subunit rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MSLSLWQQCLARLQDELPATEFSMWIRPLQAELSDNTLALYAPNRFVLDWVRDKYLNNINGLLTSFCGADAPQLRFEVGTKPVTQTPQAAVTSNVAAPAQVAQTQPQRAAPSTRSGWDNVPAPAEPTYRSNVNVKHTFDNFVEGKSNQLARAAARQVADNPGGAYNPLFLYGGTGLGKTHLLHAVGNGIMARKPNAKVVYMHSERFVQDMVKALQNNAIEEFKRYYRSVDALLIDDIQFFANKERSQEEFFHTFNALLEGNQQIILTSDRYPKEINGVEDRLKSRFGWGLTVAIEPPELETRVAILMKKADENDIRLPGEVAFFIAKRLRSNVRELEGALNRVIANANFTGRAITIDFVREALRDLLALQEKLVTIDNIQKTVAEYYKIKVADLLSKRRSRSVARPRQMAMALAKELTNHSLPEIGDAFGGRDHTTVLHACRKIEQLREESHDIKEDFSNLIRTLSS", - "output": "cytoplasm ; ATP binding ; DNA replication origin binding ; DNA replication initiation ; regulation of DNA replication" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MKRKICKALICAALATSLWAGASTKVYAWDGKIDGTGTHAMIVTQGVSILENDLSKNEPESVRKNLEILKENMHELQLGSTYPDYDKNAYDLYQDHFWDPDTDNNFSKDNSWYLAYSIPDTGESQIRKFSALARYEWQRGNYKQATFYLGEAMHYFGDIDTPYHPANVTAVDSAGHVKFETFAEERKEQYKINTAGCKTNEAFYTDILKNKDFNAWSKEYARGFAKTGKSIYYSHASMSHSWDDWDYAAKVTLANSQKGTAGYIYRFLHDVSEGNDPSVGKNVKELVAYISTSGEKDAGTDDYMYFGIKTKDGKTQEWEMDNPGNDFMTGSKDTYTFKLKDENLKIDDIQNMWIRKRKYTAFSDAYKPENIKIIANGKVVVDKDINEWISGNSTYNIK", - "output": "extracellular region ; hydrolase activity ; phosphatidylcholine phospholipase C activity ; toxin activity ; zinc ion binding ; hemolysis in another organism" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MATRSPGVVISDDEPGYDLDLFCIPNHYAEDLERVFIPHGLIMDRTERLARDVMKEMGGHHIVALCVLKGGYKFFADLLDYIKALNRNSDRSIPMTVDFIRLKSYCNDQSTGDIKVIGGDDLSTLTGKNVLIVEDIIDTGKTMQTLLSLVRQYNPKMVKVASLLVKRTPRSVGYKPDFVGFEIPDKFVVGYALDYNEYFRDLNHVCVISETGKAKYKA", - "output": "cytoplasm ; cytosol ; extracellular exosome ; guanine phosphoribosyltransferase activity ; hypoxanthine phosphoribosyltransferase activity ; identical protein binding ; magnesium ion binding ; nucleotide binding ; adenine metabolic process ; AMP salvage ; central nervous system neuron development ; cerebral cortex neuron differentiation ; dendrite morphogenesis ; dopamine metabolic process ; dopaminergic neuron differentiation ; GMP catabolic process ; GMP salvage ; grooming behavior ; guanine salvage ; hypoxanthine metabolic process ; hypoxanthine salvage ; IMP metabolic process ; IMP salvage ; locomotory behavior ; lymphocyte proliferation ; positive regulation of dopamine metabolic process ; protein homotetramerization ; purine nucleotide biosynthetic process ; purine ribonucleoside salvage ; response to amphetamine ; striatum development ; T cell mediated cytotoxicity" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MYEYLDRRYALALYEVAEENNKVDEYLRDLKEVVNIIKNSEDICKILKHPEINTSRKKEIFTELFKDKVDNKILSFLLVLIEKDRILYLEEKLKEMEKIYLEKNNMILANIKTVIPLLKEEREELIEKLGNKYNKKIILEEEIDKSIIGGVYVRVGDDVLDGTLSTRLKDIKKMMLKRE", - "output": "plasma membrane ; proton-transporting ATP synthase complex, catalytic core F(1) ; proton-transporting ATP synthase activity, rotational mechanism" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MEEKKVVRALSEHLSLPPPPSPSVAVAINGKKKSKYVVFWALEKFIPEGFTDFKLLYVRPPVSYIPTPMGIAVAVSELREDVVSAYKQELDWSANEMLRPYKKMFERRKVQVEVLLLDSLEPAAAIAEEIAGTGVTKLVIGMSLRGFFSRKIDMSSLIATAVPRFCTVYVISKGKLASVRPSESDASGSIRFERSSSTSGSTDSPRLPPEYQDFLSAVSEAQSRVSPFSPALKHSMGSNAVAQMDTSSSGTDQEEVSTGRGMEIVHSGIEGKKNKDESFSASFPMGTEAYNSMSWTSKWRDHEDRREMRSSSSSNNHDLVNMDWGAVVPENYSWVSHTASHMSDGLLSVHSITDNQVNLNFEIEKLRAELKHVQEMYAMAQTETVGASKKLTELNQRRFEESEKLVELKEKEEVAKDTASKEKQRYEEAMKEAEKVKELMMKEALHRREAEFKAERDAREKDKLQASLVSPGVQYQHYTWEEIAAATSDFAENLKIGIGAYGSVYKCNLHHTTGAVKVLHAGETQLSKQFDQELEILSKIRHPHLVLLLGACPERGCLVYEYMDNGSLDDRLMLVNDTPPIPWFERFRIALEVASALVFLHKSKPRPIIHRDLKPGNILLDHNFVSKLGDVGLSTMVNQDDVSSRTIFKQTSPVGTLCYIDPEYQRTGIISPKSDVYSLGVVILQLITAKPAIAITHMVEEAIGDDAEFMAILDKKAGSWPISDTRELAALGLCCTEMRRRDRPDLKDQIIPALERLRKVADKAQNLLSRTPSGPPSHFICPLLKGVMNEPCVAADGYTYDREAIEEWLRQKDTSPVTNLPLPNKNLIANYTLYSAIMEWKSNKR", - "output": "ATP binding ; protein serine kinase activity ; protein serine/threonine kinase activity ; ubiquitin-protein transferase activity ; protein phosphorylation ; protein ubiquitination" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MWQLLLPTALLLLVSAGMRTEDLPKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQASSYFIDAATVDDSGEYRCQTNLSTLSDPVQLEVHIGWLLLQAPRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKYFHHNSDFYIPKATLKDSGSYFCRGLFGSKNVSSETVNITITQGLAVSTISSFFPPGYQVSFCLVMVLLFAVDTGLYFSVKTNIRSSTRDWKDHKFKWRKDPQDK", - "output": "external side of plasma membrane ; extracellular exosome ; extracellular space ; Fc-gamma receptor III complex ; plasma membrane ; IgG binding ; immune receptor activity ; low-affinity IgG receptor activity ; transmembrane signaling receptor activity ; antibody-dependent cellular cytotoxicity ; calcium-mediated signaling ; cell surface receptor signaling pathway ; Fc-gamma receptor signaling pathway ; immune response ; macrophage activation ; natural killer cell activation ; natural killer cell degranulation ; natural killer cell mediated cytotoxicity ; phosphatidylinositol 3-kinase signaling ; positive regulation of natural killer cell proliferation ; positive regulation of tumor necrosis factor production ; regulation of immune response" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MGDVILSPVSTEKTALLAEKENKLTLIVDRKATKEDIKREVESRFSVKVEGINILITKKGKKAIVKLAKEYSAEEIAERIGVF", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MGQKVNPIGLRLGINRNWESRWFPTKANLVENIGEDYKIRAFLKRKLYYAGISQILVERTAKKLRVTVVAARPGIIIGKKGSDVDNLRKELQDLIGKDVNINIKEERKAGASAQLAAESVATQLEKRIAFRRAMKKVIQGAQKAGAKGIKVSVSGRLGGAEMARTEWYLEGRVPLHTLRAKIDYGFAEARTTYGNIGVKVWIFKGEVLHKGMQPEKTEESAPAKKPRRTRRGK", - "output": "ribonucleoprotein complex ; ribosome ; mRNA binding ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MNLLDKVDAASLRDDIPAFRPGDTLNVHVKVIEGSKSRIQVFKGVVIRRQGAGVRETFTIRKVSFGIGVERTFPVHTPNIDKIEVVTRGDVRRAKLYYLRDLRGKAAKIKEKR", - "output": "ribonucleoprotein complex ; ribosome ; structural constituent of ribosome ; translation" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MKSYLSNDTEAKLKKTKDLPPHIHFIGIGGIGMSALAMILAQKGYSISGSDQKKNLTLKKLEENKVHIFPTQVESNIDEILKVHGKNILVVKSSAIHQDNFELCKAKKYNLKIKHRSEILAFLIEQKKSIIVSGSHGKTTTSTYITTLFSYANKSPTAIIGGIVPLYKSNYSCGNSEFLIAEADESDGSLVKFNPNIGLITNLELEHVDHYLDLEDLIETMKQFAQKCECLITNFDCDNLRDNIHGSKWFSIQKIINIDFALIPKESNGCEIIAEYYEKEKFIDVIKIPVPGIHNLSNAAAAIAACRVAGILFKDIKKGIEKLKLPSRRFEFKGLWRNRLIVEDYAHHPSEIDAAISIASTIIETKHKLSKILPRRIVTIFQPHRYSRTKKFQKEFAKSLSKSDLVFITPIYSAGEDKIEGINNKSIGHELKKINPNLEIYTPDNNQNLIKLIKEQTIENDLILIMGAGDINLISENLFLELINNKLISNDIAA", - "output": "cytoplasm ; ATP binding ; UDP-N-acetylmuramate-L-alanine ligase activity ; cell cycle ; cell division ; cell wall organization ; peptidoglycan biosynthetic process ; regulation of cell shape" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MPDMPLRILVETIERLELVTARTQLVAFLVNLFKQTPPEIIDKVVYLVQGILWPDWKGMPELGVGEKMLIKAISLACNISEREVEKTAKEIGDIGKATEKLKQTAQSKQTGLTIFAFTQQPTGLTVTNTYNTLVKIAMAQGEGSKDLKIRLLAGLLKDASPKEAKFIVKFVEGKLRVGIGDATIMDALAVTFGGGVANRPVIERAYNLRSDLGEVAKILASKGIEELKKIKPEVGVPIRPMLAERLSDPREILVKTGGEAFVEYKYDGERAQIHKKGDKIWIYSRRLENITSQYPDVVERALEKIKADEAIVEGEIVVYDPDTGELKPFQELMHRKRKHDIRQAIKEYPVKVFLFDLLYLNGEDYTLKPLPVRREALEKIIDKTEDFTIAEYIKTSNPEELEKFFLEAIGNGVEGVMAKAIHKDSIYQAGVRGWLWIKYKRDYKSEMADTVDLVVVGAFYGKGRRGGKYGALLMAAYNKEKDVFETVCKVGSGFKDEDLDKLPDMLKPYIRDRKHPRVVAEIEPDVWVDPVLVAEIIGAELTLSPIHTCAKGVIKPDAGISIRFPRFIRWRPDKRPEDATTSSELVEMYQRQLKKITTEQATQEQL", - "output": "ATP binding ; DNA binding ; DNA ligase (ATP) activity ; GTP binding ; metal ion binding ; cell cycle ; cell division ; DNA biosynthetic process ; DNA recombination ; DNA repair ; DNA replication" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MAAVGSGGSTATAGPGAVSAGALEPGTSSAAHRRLKYISLAVLVVQNASLILSIRYARTLPGDRFFATTAVVMAEVLKGLTCLLLLFAQKRGNVKHLVLFLHEAVLVQYMDTLKLAVPSLIYTLQNNLQYIAISNLPAATFQVTYQLKILTTALFSVLMLNRSLSRLQWASLLLLFTGVAIVQAQQAGGGGPRPLDQNPGVGLAAVVASCLSSGFAGVYFEKILKGSSGSVWLRNLQLGLFGTALGLVGLWWAEGTAVTHRGFFFGYTPAVWGVVLNQAFGGLLVAVVVKYADNILKGFATSLSIVLSTVASIRLFGFHVDPLFALGAGLVIGAVYLYSLPRGAAKAIASASAPTSGPCTHQQPPGQPPPPQLSSHHGDLSTEPFLPKSVLVK", - "output": "Golgi membrane ; antiporter activity ; UDP-galactose transmembrane transporter activity ; carbohydrate transport" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MEKEVIVVGAGLAGSEAAYQLAKRGIKVKLYEMKAKKKTPAHSKDYFSELVCSNSLGSDSLENASGLMKEELRILGSLLIEVADKNRVPAGQALAVDRDGFSEEVTKILKNTKNIEIIEEEFTEFPNDKIVIIASGPLTSDKLFQKISEITGEESLYFYDAAAPIVTFESIDMNKAYFQSRYGKGDGEYINCPMNKEEYYNFYNELIKAERAELKNFEKEKLFDACMPIEKIAMSGEKTMTFGPLKPKGLINPKTEKMDYAVVQLRQDDKEGKLYNIVGFQTNLKFGEQKRVFSMIPGLENAEFIRYGVMHRNTFINSTKLLDKTLKLKNKDNIYFAGQITGGEGYVTAIATGMYVAMNVANRLENKEEFILEDISEIGAIVNYITEEKKKFQPMGANFGIIRSLDENIRDKKEKYRKLSERAIEYLKNSIKGV", - "output": "cytosol ; 5,10-methylenetetrahydrofolate-dependent tRNA (m5U54) methyltransferase activity ; flavin adenine dinucleotide binding ; methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase (FADH2-oxidizing) activity ; tRNA methylation ; tRNA wobble uridine modification" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MKLHELKAAEGANKASKRVGRGTGSGLGKTSGRGQNGQNSRSGGGVRPGFEGGQMPLYRRLPKRGFKNIFAKEYAAINLDRLNCFEDGTVVTPELLVEKRVVKKVKDGVKILGNGNIEKKLTVKAAKFSKSAIEKIEAAGGKVEVI", - "output": "large ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MYFFIKTINKYLYKLIYSFIVFYQKIISPILPARCRYYPTCSNYGKQALAWYGVWNGSLLLLKRIGRCHPLGGHGIDFVPLPLASYHYQHVSLIMSACMKAQGLYVYRDNNGYVARLNHMMKLT", - "output": "plasma membrane" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MITKIDKNKVRMKRHARVRSKLAGTTERPRLNVYRSNKHIYAQVIDDVKGVTLAQASTQDKNLGLETTSNVEAAAKVGEAVAKLAVEKGVKAVVFDRGGYLFHGRVKALADAARENGLEF", - "output": "cytoplasm ; ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MLKPRAAEGAAVALLRLLLLLLLLPPELRDRGLGVAGAAGAGLPESVIWAVNAGGEAHVDVHGIHFRKDPLEGRVGRASDYGMKLPILRSTPEDQILYQTERYNEETFGYEVPVKEEGDYVLVLKFAEVYFAQSQQKVFDVRLNGHVVVKDLDIFDRVGHSTAHDEIIPMSIRKGKLSVQGEVSTFTGKLYIEFVKGYYDNPKVCALYIMAGTVDDVPKLQPHPGLEKKEEEEEEEEYDEGSNLKRQTNKNRVQSGPRTPNPYASDNSSLMFPILVAFGVFIPTLFCLCRL", - "output": "endoplasmic reticulum ; membrane ; oligosaccharyltransferase complex ; carbohydrate binding ; enzyme binding ; carbohydrate metabolic process ; protein N-linked glycosylation" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MNSLEAGRVLSVLDEALEGIRLISYVTQDVLDTAEQLRDMLGEDLANALIKHRQLIQSAKSTLNNDQVQASTLELVRLLKKSPSAQRLQVLPYERTYGILQTLQYFEQLRQFAQKRLTTTVEEDSSNREFFEEVRDREERAVAEQEQLKQKLKLQRVELQKAAGTIQVSEDRARGEVSEVQSSTQQSRAAIEGSARAQSEADKSSFQSDLDQVTKELAAARAELARLRQEHKDNEALLRKARKRAEQDVEVQIGEYDADVGAKEEELGKARAEYEEVLRQLQEYNSGWSEMYQERLEYEERERRLADQRFQAALLAVRQNHAARVIQSYWRGFKKAREAAKKKAKKLEKAKAAKKK", - "output": "axoneme ; motile cilium" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MLEFMDYVQFAFYNATKWNYENSYSQLTATAKGLLDFETPGGLRFNLSSLSSPNFATSYALGSVGLVDGSLSYLYSSLPLRTTAQSAKIDLHEIIRGYRQIQELRRVDEPWMLEQWHGGRRIDKRDTLLYGRLYLPQSTLEALYLRRITPTQQVRITAVSDSRLRNGGTILALHQYDTGKYSTETLYSTDGGLLGLRGLYNFGPDPRKEVTEPPKQMPRIDDKFYGRFSAGAELYYGTLNKSGGVSVGGRFATLPAHRGIPLTATLTLNPLMGNISSTYAVRAGKNLSLCSRLDFNVYSYESDLVLGCELWKMRAPVEERRERSMEAKLAWRLDEVDLEKEKKPEEVAGVLKARVDQNLKVGLVWEGRVKELLFTLGTSIDMKRRDQPFRALGLELQYSS", - "output": "ERMES complex ; SAM complex ; establishment of mitochondrion localization ; mitochondrial genome maintenance ; mitochondrial outer membrane translocase complex assembly ; mitochondrion-endoplasmic reticulum membrane tethering ; phospholipid transport ; protein insertion into mitochondrial outer membrane" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MAKQARAVQTWRSIVDAAASVFDDYGYERAAISEILRRAKVTKGALYFHFASKEAIAQAIMDEQTSTVEFEQEGSPLQSLVDGGQQFAFALRHNSMARAGTRLSIEGVFLGGPHPWGDWIDATARMLELGQERGEVFPQIDPMVSAKIIVASFTGIQLVSEADSGRADLRGQVAEMWRHILPSIAHPGVIAHIKPEGRVDLAAQAREKAEREEQEARIAAEAKGAGSDAATDSGSRSGGSGLRGGGSGRGPRAGGAGDEGDEEPAGAGVAAGGVVA", - "output": "cytoplasm ; DNA binding ; DNA-binding transcription factor activity ; negative regulation of DNA-templated transcription ; negative regulation of sporulation resulting in formation of a cellular spore ; sporulation resulting in formation of a cellular spore ; streptomycin biosynthetic process" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MSSLYYANALFSKYPASSSVFATGAFPEQTSCAFASNPQRQGYGAGSGASFAASMQGLYPGGGGMAGQSAAGVYAAGYGLEPSSFNMHCAPFEQNLSGVCPGDSAKAAGAKEQRDSDLAAESNFRIYPWMRSSGTDRKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTAGPGTTAQDRAEAEEEEEE", - "output": "cytosol ; nuclear body ; nucleus ; DNA-binding transcription activator activity, RNA polymerase II-specific ; DNA-binding transcription factor activity, RNA polymerase II-specific ; RNA polymerase II cis-regulatory region sequence-specific DNA binding ; anterior/posterior pattern specification ; embryonic skeletal system morphogenesis ; myeloid cell differentiation ; positive regulation of branching involved in ureteric bud morphogenesis ; regulation of transcription by RNA polymerase II" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MVPPPPSRGGAARGQLGRSLGPLLLLLALGHTWTYREEPEDGDREICSESKIATTKYPCLKSSGELTTCYRKKCCKGYKFVLGQCIPEDYDVCAEAPCEQQCTDNFGRVLCTCYPGYRYDRERHRKREKPYCLDIDECASSNGTLCAHICINTLGSYRCECREGYIREDDGKTCTRGDKYPNDTGHEKSENMVKAGTCCATCKEFYQMKQTVLQLKQKIALLPNNAADLGKYITGDKVLASNTYLPGPPGLPGGQGPPGSPGPKGSPGFPGMPGPPGQPGPRGSMGPMGPSPDLSHIKQGRRGPVGPPGAPGRDGSKGERGAPGPRGSPGPPGSFDFLLLMLADIRNDITELQEKVFGHRTHSSAEEFPLPQEFPSYPEAMDLGSGDDHPRRTETRDLRAPRDFYP", - "output": "collagen trimer ; extracellular matrix ; extracellular space ; calcium ion binding ; collagen binding ; protease binding ; lung development ; lymphangiogenesis ; lymphatic endothelial cell migration ; positive regulation of angiogenesis ; positive regulation of endothelial cell migration ; positive regulation of lymphangiogenesis ; positive regulation of protein processing ; positive regulation of vascular endothelial growth factor production ; positive regulation of vascular endothelial growth factor signaling pathway ; respiratory system process ; sprouting angiogenesis ; venous blood vessel morphogenesis" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MTPAVSPAHTVLFEAKARKGISFEQIGKAIGRDEVWVASAFYGQAKFNEEELKKLSEVLEISSAQIVKELGDQWFPNRGLGPVPPSDPVIYRLFEGVLVYGHPIKAIIHEKFGDGIMSMIDCNINVERKPDPKGDRVVVTFDGKFLPYSKW", - "output": "cyanate hydratase activity ; DNA binding ; cyanate metabolic process" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MKPSSSRASFAQRHWQHDGWLATLLRPLSALTAWHVARRRAQYQTGRRPVYRAPVPVMVIGNIYVGGTGKTPVVIATVQALRERGWTPGVISRGYGARIGPQPRVGQGRELTPASHGDEPALIAHATGAPVAVHPRRALAAQALLSQYPQVDVIVSDDGLQHLAIARDIEIAVQDDRGIGNGRLLPAGPLREPAARLDTVDAIITNRAPQSSATPTAASGQGPRRADMRLEPEAARHLQSGARRPLADFADARAFPAVAAAAGIGNPERYFATLRAAGLHPEPCLALPDHYDYRRSPFEAIVADAILVTSKDAIKCRGLDDPRLWEVPVQARLSDPGLFDWLEARLRQAAAAIAR", - "output": "ATP binding ; tetraacyldisaccharide 4'-kinase activity ; lipid A biosynthetic process ; phosphorylation" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MTHQTHAYHMVNPSPWPLTGALSALLMTSGLTMWFHFNSTILLMLGLTTNMLTMYQWWRDIIRESTFQGHHTPVVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGHRNHMLQALFITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS", - "output": "mitochondrial inner membrane ; respiratory chain complex IV ; cytochrome-c oxidase activity ; aerobic electron transport chain ; respiratory chain complex IV assembly" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MSNGAFDAIFEYAWGQIDKPISGDFIYGKDLPKLIEIIENIFQKAQKSGSYELRLPLFSEINKDLFRTFSNTKTFFKIHKEEFDDIFFNLVNHPLREILENAFIGVDSIPSDFIVSMNLNSPSKFLVENKSKNTEGAGISTPRKKLTESPIKLLSRNNIGKALEVQVEELKRELTAKQSLLQENERQVSELKIRLETYQEKYASIQQRFSDLQKARQVEDNQNSSRTSDPGSPLVTGIDQKAILEEFRRRLQRQTDTISFLKDQIRRERGLNCSNDKVSHSKRKHATTDGDGTFKNFISAVPSNIWVKATIRIIVCFALLAGVLPYIRKYVYAHDTPSQNSRLQLSWWENSGILSKIVWFFEDQTDLETEYRSNANVDDAYSRVFGI", - "output": "cytoplasm ; nuclear membrane ; spindle pole body ; protein localization to spindle pole body ; spindle pole body duplication" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MTSQVVPLSTFVQHLESCEGYEFRTMIKMLASPAYAKQQLLKDELSVFMAKVLKLLRSKDDYQVWKGCHIATVFCTYNPVVLCSFGGELMGILYRALEDATKYYGDSVQTEQRKVMVRALVKTLDTLMDLIRGKPSLTREALTPHLSAIIPMLISFGRCEPNLSLPVIKKLLSKHSTTFRPHVGKLKQLLTELYGHYQSLDPVTRKVVCDTAAYLHLTQKPGNNANEHQAHHKSFPDEHWRAGLFSVLSQFGPVVRLWGEILDIGSDENLARLLETLPRDTANDTSPLLPALTVDINKPVTLWHISARLEQLTDMVESFIRLPTLFPTRIPLGELVKVSEILLSLTTNYLPLKRGLRRDAALTGSIRSALPETQLQGIRLLRCLSDHIGKNLITYMPAILSSMELFIPLKDKKTSIDYQKCVDLQNGLLQLTALMNSIAQHLGHKVEEMSLAIKLVDICAYIIEHKQNLDSAFSSTSGTAKAAGGAKKKEYKAKTGSMSDLFSHPHKFLHPVPLENYTVVNTYYNMALTHWKLPSTQQAKITKYCIYYSLSFKEKLGYIPQTFIELLNTIVLFPGKDRFSILPIAVHLLKETGDPVFDVLCNPKLPLEMIQIRRQPTSSEDDTATSEAEEYAAPADQDDEHLSDDEHTTVDDGVATNAVMGLNNLVSSETLRSEQDSALETQHPEQARTSNLVPDEASEGREDARIFKKRSSSDEQDPPSKRTRAVAAQTPVPAAVPVDNGEPESDDGSDFEIPEIELSDADEE", - "output": "cytosol ; nucleoplasm ; nucleus ; Rix1 complex ; chromatin binding ; pre-replicative complex assembly involved in nuclear cell cycle DNA replication ; regulation of DNA-templated DNA replication initiation ; ribosomal large subunit assembly ; rRNA processing" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MTPEEQLRIIKEGTVEIIEEEELLKKLKEGRPLRVKAGFDPTAPDLHLGHVVLLQKLRQFQQLGHEVFFIIGDFTAMIGDPTGRSQTRPPLSREQVLENAKTYEHQVFKVLIPEKTTVVFNSTWLEELGTKGLIELCAKYTVARMLEREDFSKRFKEGIPIYIHEFIYPLLQAYDSVAIKADVEIGGTDQKFNLLIGRDIQREYGQEPQVCITLPLLVGTDGVRKMSKSYGNYVGITEDPKTMFAKIMSIPDEIMWDWFLLLTDYNKEEIEKMRREMHPMEAKKLLAFTIVKRFHSEEEARKAKEWWEKTFSQREFPEDAPLVKLNEKKLRAVDFLVKIGAVKSKNEARRVIQGGGLKINGEKVTDPNTEIEINGELKVKVGKKKFYRVVSG", - "output": "cytosol ; ATP binding ; RNA binding ; tyrosine-tRNA ligase activity ; tRNA aminoacylation ; tyrosyl-tRNA aminoacylation" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MENKKTIYFLCTGNSCRSQMAEAWGKKYLGDKWNVLSAGIEAHGVNPNAIKAMKEVDIDITDQTSDIIDRDILDKADLVVTLCGHANDVCPTTPPHVKRVHWGFDDPAGQEWSVFQRVRDEIGARIKKYAETGE", - "output": "cytoplasm ; arsenate reductase (thioredoxin) activity ; protein tyrosine phosphatase activity ; response to arsenic-containing substance" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MEDFVRQCFNPIIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSDFHFIDERGESIIVESGDPNALLKHRFEIIEGRDRTMAWTVVNSICNTTGVEKPKFLPDLYDYKENRFVEIGVTRREVHIYYLEKANKIKSEKTHIHIFSFTGEEMATKADYTLDEESRARIKTRLFTIRQEMASRGLWDSFRQSERGEETIEERFEITGTMRRLADQSLPPNFSSLENFRAYVDGFEPNGCIEGKLSQMSKEVNARIEPFLKTTPRPLRLPDGPPCFQRSKFLLMDALKLSIEDPSHEGEGIPLYDAIKCMKTFFGWKEPNIVKPHEKGINPNYLLAWKQVLAELQDIENEEKIPKTKNMKKTSQLKWALGENMAPEKVDFEDCKDVSDLKQYDSDEPEPRSLASWIQSEFNKACELTDSSWIELDEIGEDVAPIEHIASMRRNYFTAEVSHCRATEYIMKGVYINTALLNASCAAMDDFQLIPMISKCRTKEGRRKTNLYGFIIKGRSHLRNDTDVVNFVSMEFSLTDPRLEPHKWEKYCVLEIGDMLLRTAIGQVSRPMFLYVRTNGTSKIKMKWGMEMRRCLLQSLQQIESMIEAESSVKEKDMTKEFFENKSETWPIGESPEGVEEGSIGKVCRTLLAKSVFNSLYASPQLEGFSAESRKLLLIVQALRDNLEPGTFDLGGLYEAIEECLINDPWVLLNASWFNSFLTHALK", - "output": "host cell cytoplasm ; host cell nucleus ; endonuclease activity ; metal ion binding ; RNA binding ; cap snatching ; DNA-templated transcription ; suppression by virus of host mRNA transcription via inhibition of RNA polymerase II activity ; viral RNA genome replication" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MKEKSKNAARTRREKENSEFYELAKLLPLPSAITSQLDKASIIRLTTSYLKMRVVFPEGLGEAWGHSSWTSPLDNVGRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELTGNSIYEYIHPADHDEMTAVLTAHQPYHSHFVQEYEIERSFFLRMKCVLAKRNAGLTCGGYKVIHCSGYLKIRQYSLDMSPFDGCYQNVGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDLIEKTLYHHVHGCDTFHLRCAHHLLLVKGQVTTKYYRFLAKHGGWVWVQSYATIVHNSRSSRPHCIVSVNYVLTDTEYKGLQLSLDQISASKPAFSYTSSSTPTMTDNRKGAKSRLSSSKSKSRTSPYPQYSGFHTERSESDHDSQWGGSPLTDTASPQLLDPADRPGSQHDASCAYRQFSDRSSLCYGFALDHSRLVEERHFHTQACEGGRCEAGRYFLGTPQAGREPWWGSRAALPLTKASPESREAYENSMPHIASVHRIHGRGHWDEDSVVSSPDPGSASESGDRYRTEQYQSSPHEPSKIETLIRATQQMIKEEENRLQLRKAPSDQLASINGAGKKHSLCFANYQQPPPTGEICHGSALANTSPCDHIQQREGKMLSPHENDYDNSPTALSRISSPNSDRISKSSLILAKDYLHSDISSHQTAGDHPTVSPNCFGSHRQYLDKHAYTLTGYALEHLYDSETIRNYSLGCNGSHFDVTSHLRMQPDPAQGHKGTSVIITNGS", - "output": "nucleus ; DNA binding ; DNA-binding transcription factor activity ; protein heterodimerization activity ; cell differentiation ; nervous system development" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MEQLLRAELRTATLRAFGGPGAGCISEGRAYDTDAGPVFVKVNRRTQARQMFEGEVASLEALRSTGLVRVPRPMKVIDLPGGGAAFVMEHLKMKSLSSQASKLGEQMADLHLYNQKLREKLKEEENTVGRRGEGAEPQYVDKFGFHTVTCCGFIPQVNEWQDDWPTFFARHRLQAQLDLIEKDYADREARELWSRLQVKIPDLFCGLEIVPALLHGDLWSGNVAEDDVGPIIYDPASFYGHSEFELAIALMFGGFPRSFFTAYHRKIPKAPGFDQRLLLYQLFNYLNHWNHFGREYRSPSLGTMRRLLK", - "output": "cytosol ; ATP binding ; kinase activity ; protein-fructosamine 3-kinase activity ; protein-ribulosamine 3-kinase activity ; epithelial cell differentiation ; fructosamine metabolic process ; fructoselysine metabolic process ; phosphorylation ; post-translational protein modification ; protein deglycation" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MKQNIKRNWIWILIVMIVIGIILYFSIRNLFSTKVAEWSISELLNNIERAKENTTDALYFKEITVNPFTNSITGVFNNTDNTSTSFVTYTNLDLLRLSGVASDQGVISKIFTPEVFLTANNVSGSLKSVATPQPNPFLGILISSVPVLILIFVMVWIYRSQVKMMNGQGGAFGGDKGTAQIIKSDKKFTDIAGNKEPIEEISEVVDYLKNPGKYQQSGARMPHGILLGGPPGTGKTLLAKATAGEANVPFYFVSASSFVELFVGMGAKRVRQVISEARKNSPAIIFIDELDAIGRTRGSGIGGGHDEREQTLNQLLVEMDGMKENSGLLFIAATNRTDVLDPALIRPGRFDRIITVGLPDVKEREEILKLHAKGKRFESNVDFANIAKRTPGFSGAQLENVINEAVLLSIREDTKVINLYQIDEAIDRVMSGPAKKSRTITKEELTMVAYHEAGHAVVGIKVPGGNKVQKITIIPRGNAGGYNLMMPENEKYNYSKADLYATIASFMGGRAAEEIIYGDNKISTGAADDIKKATSIARRMVTQFGMSDLGPIEYQSDEGSPFLGKALASNSSLSNQVNHEIELEIRKIIFTAKEQATKIIKQNIELLELIKESLLKKETIVGEEIEYIAKHMKLPPEKIEEKDLSKNSEDNNLDSLIEKTSKKE", - "output": "plasma membrane ; ATP binding ; ATP hydrolysis activity ; ATP-dependent peptidase activity ; metalloendopeptidase activity ; zinc ion binding ; protein catabolic process ; proteolysis" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MTSVYESLLSDYPDKGVIGKPEIRDTETEIIEKLRTLYNHFVQAKQTGKPIFVLIGAGVSTGSKLPDFRGKQGVWTLQAEGKHAEGVDFQVARPGVSHKSILALHKAGYIKTIITQNVDGLDRKVGIPVEDLIEVHGNLFLEVCQSCFSEYVREEIVMSVGLCPTGRNCEGNKRTGRSCRGKLRDATLDWDTEISLNHLDRIRKAWKQTSHLLCIGTSLEIIPMGSLPLDAKSKGIKTTTINYQETAHEKIVETAIHADVKLILYSLCNALGVNVDLGDDLPDEVPIPLKIS", - "output": "cytoplasmic stress granule ; nuclear envelope ; nuclear pore ; nucleus ; P granule ; metal ion binding ; NAD+ binding ; NAD-dependent histone H3K9 deacetylase activity ; NAD-dependent protein deacetylase activity ; transcription corepressor activity ; transcription factor binding ; transferase activity ; negative regulation of transcription by RNA polymerase II ; P granule assembly ; protein deacetylation ; response to heat" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MDKQAERGQSAGPVKTPQGTQPPAHNYTYHTNAAQRAVYDYLKNVKPIPELAEPKTYKTYEEASVEAVLYPIIEKHQVIMVAGAFFGDEGKGKTVNAVANHPGCTFIARVNSGENAGHTVYDDAGRKFVFNLAPSGLLSKGKRNYVGPECVMDPISFMENEVKQLIEANVPYKEQLFIGNVSIVTPYHKLLDLLASAPNSSTLKGMAPIHASKVTKRGIRLDHIFNDQSVLRSRLRKDIDTYFGFLKVKGLSDADVLRRCEKENGDGVVRVPPYVVEFVQAEDKVEYLVKLYMDRVRNNKNFPARCDVAHELRSALSRGEKVMLEGPQSYWLSNAREKFWESTTSADTTASGLLATAQYNFQLYSSVVINVHKAPGSSRVGVGANPSSFVAQDYFSATGVKTLRDLPENMCVDFDSIQKLFFTKAFHPETKEYNGIWEPLEFEDSTGKYNIGVAMAVASSRQHGECGAVTKKPRVCGFFDCVLQYEVNAVQGPYLSISALDRGDDYDKLGVTIAYVYYNGKNDEVLNINGREYKNGDIIKAGEAVPGEVALYYCHPIVKLINGWKQTPIAASKRKPGDPLPRGVCEFLSTVEYFTKAKIISIGNGPRGKDIIYIKQ", - "output": "cytoplasm ; adenylosuccinate synthase activity ; GTP binding ; magnesium ion binding ; 'de novo' AMP biosynthetic process" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MEVGIDFGTTFSTICFSPSGVSGCTPVAGSVYVETQIFIPEGSSTYLIGKAAGKAYRDGVEGRLYVNPKRWAGVTRDNVERYVEKLKPTYTVKIDSGGALLIGGLGSGPDTLLRVVDVICLFLRALILECERYTSTTVTAAVVTVPADYNSFKRSFVVEALKGLGIPVRGVVNEPTAAALYSLAKSRVEDLLLAVFDFGGGTFDVSFVKKKGNILCVIFSVGDNFLGGRDIDRAIVEVIKQKIKGKASDAKLGIFVSSMKEDLSNNNAITQHLIPVEGGVEVVDLTSDELDAIVAPFSARAVEVFKTGLDNFYPDPVIAVMTGGSSALVKVRSDVANLPQISKVVFDSTDFRCSVACGAKVYCDTLAGNSGLRLVDTLTNTLTDEVVGLQPVVIFPKGSPIPCSYTHRYTVGGGDVVYGIFEGENNRAFLNEPTFRGVSKRRGDPVETDVAQFNLSTDGTVSVIVNGEEVKNEYLVPGTTNVLDSLVYKSGREDLEAKAIPEYLTTLNILHDKAFTRRNLGNKDKGFSDLRIEENFLKSAVDTDTILNG", - "output": "virion component ; ATP binding ; ATP-dependent protein folding chaperone" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MTNIGSLLVDAAALMVTGMGVVFIFLTILIFLVRLMSKLVPQEVPPPITAPKAVKNQANHTSTVSPQVVAAISAAIHQHRASVAK", - "output": "plasma membrane ; decarboxylation-driven active transmembrane transporter activity ; oxaloacetate decarboxylase activity ; sodium ion transmembrane transporter activity ; sodium ion export across plasma membrane" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MAVSQTTLWNLISGILGVICLLLMTTMGILLKNLLLTESIQPTLSPGPITELQKGSDCCSCPKRWIGHQCNCYLFFDELKSWTESRDFCASQNSSLLHIQNRDELRFVSSSKYFYWIGVYYSKENGTWLWENGLALPQDLLQTIQTFDTKKCVIYSSSHSVLDVSCEDKSRFICKQELM", - "output": "plasma membrane ; carbohydrate binding ; adaptive immune response ; innate immune response ; negative regulation of natural killer cell mediated cytotoxicity ; negative regulation of T cell mediated cytotoxicity ; positive regulation of natural killer cell mediated cytotoxicity ; stimulatory C-type lectin receptor signaling pathway" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MSANQEEDKKPGDGGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDMNSIAFLFDGRRLRAEQTPDELDMEDGDEIDAMLHQTGGSGGGATA", - "output": "cytoplasm ; cytosol ; nucleus ; protein tag ; ubiquitin-like protein ligase binding ; heat acclimation ; negative regulation of DNA-binding transcription factor activity ; protein sumoylation ; response to heat" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MHIYILGSAAGGGFPQWNCNCPNCHGVRTGTINAKVRTQSSIAISENGVDWILLNASPDIRQQLFDFKAAQPARKLRDTGITNVILMDSQLDHTTGLLTLREGCPINVWCTEMVYQDLTTGFPVFNMLKHWNGGLLYHQIDPKQAFKIDGFENLEFLPLIIQSAAPPYSPHRHDPHEGDNIALIIKDHKTQKQLFYAPGLGKIDDQIMQIMQDSDCVMIDGTLWTDDEMQQTGVGKKTGREMGHLYISGEGGSLSYLNQLSTPKKVLIHINNTNPILNEDSAQFAELKANDVEVAFDGMQIEL", - "output": "pyrroloquinoline quinone biosynthetic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MTRSLLWQMVIVLGAILMVNYVLTTLTPQTQEPVVDVSYSRFKTELAADNVAAITFEGNNVVGNLRERTILNRVEGTEEVQSFLRFRTTMPPVTDTRLLDDLEQRKVDVKVRPESKPSPWATAMIYMLPWLLIVGVWWFVIKGMRTRQGPGGGMMGGFSKSGAKMYTKERSRVTFADVAGLDEAKQELMEIIEFLRNPKKFMRLGAKAPRGVLLVGPPGTGKTLMARAVAGEAEVPFFTISASQFIEMFVGVGASRVRDLFNNAKKNAPSIIFIDELDAVGRSRGTGLGGGNDEREQTLNQLLSEMDGFEAHDEVIVMSATNRPDVLDPALLRPGRFDRQVTVERPDWRAREEILKVHTRQVPIDEDVDLQIIARSTPGMCGADLENLVNEAALIAARENAQKVTMQHFEQAKDRVLMGTERKLVMSQQEKRITAYHEAGHTLLARLSPGADPIHKVSIIPRGQALGVTQQLPVDDRYHYSRSYLMTRIAVSLGGRAAEKAIFEEYSTGAQNDLKQATDLAEKMVCQWGMSERVGPMSINRGEEHPFLGRKLASDNAFSQHMAWIIDQEIEKVVKAGEQAADEIIANHLPVLKKLADALLEEEVLDRTRVDEVLRETGIEVQDDPAAHPDGDHVLQGELAGGAVEG", - "output": "plasma membrane ; ATP binding ; ATP hydrolysis activity ; ATP-dependent peptidase activity ; metalloendopeptidase activity ; zinc ion binding ; protein catabolic process ; proteolysis" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MYRSHTCGELRAEHIGQEVLLAGWVHRRRDHGPLIFIDLRDRYGITQIVFDSADSPVAHAVASDARVEYVLQVRGRVVQRPEEAYNPDIATGMIEVHATEATVLNPAKTPPLYINKEGGEEETLRLKYRYLDLRRERMQRNIMLRHRIVKFIRDFLDREGFVEIETPILIKSTPEGARDYLVPSRLHPGKFYALPQSPQQLKQLLMVAGFDRYFQIARCFRDEDQRADRQPEFTQLDMEMSFVDQGDVLDIIERLFTALCREIVPHKRLVTPFPRLTYAEAMERFGSDKPDLRYGLELVDVSDVVAASSFGVFRAALDTGGQVKGLRIPGAGSYSRKQIDEVVELAKQAGARGLLWAVVPGEGGEVRSSFGRQVSPDEMAAIIRRMEGAPGDLLLIVADPPKIVAQTLDRLRREFGARLNLADPNVLAWAWVIDFPLVEWNEEEQRWDAVHHPFTAPKDEDLHLMDTDPGRVRAKAYDLILNGYEAGGGSIRIHRRDVQQRLFDLLGIDRETAMRQFGHMLEAFEYGAPPHGGIAPGIDRICMILADEVTIREVMAFPKTQQAVDLMTNAPSPVDERQLRELHIALRLD", - "output": "cytoplasm ; aspartate-tRNA ligase activity ; aspartate-tRNA(Asn) ligase activity ; ATP binding ; nucleic acid binding ; aspartyl-tRNA aminoacylation" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MISDRKLEHLILCASCDVEYRKKTGFEDIEIVHRAIPEINKEKIDISLDFLGRELSSPVMISAITGGHPASMKINRELARAAEKLGIALGLGSQRAGVEHPELEGTYTIAREEAPSAMLIGNIGSSHIEYAERAVEMIDADALAVHLNPLQESIQPGGDVDSSGALESISAIVESVDVPVMVKETGAGICSEDAIELESCGVSAIDVAGAGGTSWAAVETYRADDRYLGELFWDWGIPTAASTVEVVESVSIPVIASGGIRSGIDAAKAISLGAEMVGIALPVLEAAGHGYREVIKVIEGFNEALRTAMYLAGAETLDDLKKSPVIITGHTGEWLNQRGFETKKYARRS", - "output": "cytoplasm ; FMN binding ; isopentenyl-diphosphate delta-isomerase activity ; magnesium ion binding ; NADPH binding ; oxidoreductase activity ; isoprenoid biosynthetic process" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MWLQILSLVLSVGRIDAAPPGQSRIVGGYKCEKNSQPWQVAVINEYLCGGVLIDPSWVITAAHCYSNNYQVLLGRNNLFKDEPFAQRRLVRQSFRHPDYIPLIVTNDTEQPVHDHSNDLMLLHLSEPADITGGVKVIDLPTKEPKVGSTCLASGWGSTNPSEMVVSHDLQCVNIHLLSNEKCIETYKDNVTDVMLCAGEMEGGKDTCAGDSGGPLICDGVLQGITSGGATPCAKPKTPAIYAKLIKFTSWIKKVMKENP", - "output": "metal ion binding ; serine-type endopeptidase activity ; serine-type peptidase activity ; regulation of systemic arterial blood pressure ; zymogen activation" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MAETQAPAGYLFSEKHEWVKVEGDTALIGISDFAQSALGDIVFVDLPKSGKTVKQFETFGTIESVKAAEDLYAPVGGEVIESNSALSKNPGDVNSKPFDSWMIKVKGFSTSELEKLLSPEKYKALVAKLE", - "output": "glycine cleavage complex ; glycine decarboxylation via glycine cleavage system" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MYPSNKKKKVWREEKERLLKMTLEERRKEYIRDYVSLSTILSWKEEMKSKGQNDEENTQEAPQMKKSLSEKVSLYRGDITLLEVDAIVNAANASLLGGGGVDGCIHRAAGPCLLAECRNLNGCETGHAKITCGYDLPAKYVIHTVGPIARGHINGSHKEDLANCYQSSLKLVKENNLRSVAFPCISTGIYGFPNEPAAVIALGTIKEWLAKNHQEVDRIIFCVFLEVDFKIYKKKMNEFFPVDDNNEGTDADMKEDSEGPEPKGLSPPHKKSKAKKPESSKDSSEDESGPEEKQTAEEMEGQSQEAGGLRFLLRNLLGLIHRDGVNTTPVPSPASEDKAEVHKDEDSAKDDNTVKDSDMTNHSVCDQELPNGQENDSAKSEGKTEAESPSSSMETEDLSPNQEDAAIVEQPEVIPLIDDQEAQEGGEAQGKDAPAVFAESQGSSEAENTSGPDVDMNSQVDGVNEPTESLQEDLQ", - "output": "nucleolus ; nucleoplasm ; nucleus ; ADP-ribosylglutamate hydrolase activity ; deacetylase activity ; hydrolase activity, acting on glycosyl bonds ; brain development ; DNA damage response ; peptidyl-glutamate ADP-deribosylation ; protein de-ADP-ribosylation ; purine nucleoside metabolic process ; response to bacterium" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MAAEEGVASAASAGGSWGTAAMGRVLPMLLVPVPAEAMGQLGSRAQLRTQPEALGSLTAAGSLQVLSLTPGSRGGGRCCLEGPFWHFLWEDSRNSSTPTEKPKLLALGENYELLIYEFNLKDGRCDATILYSCSREALQKLIDDQDISISLLSLRILSFHNNTSLLFINKCVILHIIFPERDAAIRVLNCFTLPLPAQAVDMIIDTQLCRGILFVLSSLGWIYIFDVVDGTYVAHVDLALHKEDMCNEQQQEPAKISSFTSLKVSQDLDVAVIVSSSNSAVALNLNLYFRQHPGHLLCERILEDLPIQGPKGVDEDDPVNSAYNMKLAKFSFQIDRSWKAQLSSLNETIKNSKLEVSCCAPWFQDILHLESPESGNHSTSVQSWAFIPQDIMHGQYNVLQKDHAKTSDPGRSWKIMHISEQEEPIELKCVSVTGFTALFTWEVERMGYTITLWDLETQGMQCFSLGTKCIPVDSSGDQQLCFVLTENGLSLILFGLTQEEFLNRLMIHGSASTVDTLCHLNGWGRCSIPIHALEAGIENRQLDTVNFFLKSKENLFNPSSKSSVSDQFDHLSSHLYLRNVEELIPALDLLCSAIRESYSEPQSKHFSEQLLNLTLSFLNNQIKELFIHTEELDEHLQKGVNILTSYINELRTFMIKFPWKLTDAIDEYDVHENVPKVKESNIWKKLSFEEVIASAILNNKIPEAQTFFRIDSHSAQKLEELIGIGLNLVFDNLKKNNIKEASELLKNMGFDVKGQLLKICFYTTNKNIRDFLVEILKEKNYFSEKEKRTIDFVHQVEKLYLGHFQENMQIQSFPRYWIKEQDFFKHKSVLDSFLKYDCKDEFNKQDHRIVLNWALWWDQLTQESILLPRISPEEYKSYSPEALWRYLTARHDWLNIILWIGEFQTQHSYASLQQNKWPLLTVDVINQNTSCNNYMRNEILDKLARNGVFLASELEDFECFLLRLSRIGGVIQDTLPVQNYKTKEGWDFHSQFILYCLEHSLQHLLYVYLDCYKLSPENCPFLEKKELHEAHPWFEFLVQCRQVASNLTDPKLIFQASLANAQILIPTNQASVSSMLLEGHTLLALATTMYSPGGVSQVVQNEENENCLKKVDPQLLKMALTPYPKLKTALFPQCTPPSVLPSDITIYHLIQSLSPFDPSRLFGWQSANTLAIGDAWSHLPHFSSPDLVNKYAIVERLNFAYYLHNGRPSFAFGTFLVQELIKSKTPKQLIQQVGNEAYVIGLSSFHIPSIGAACVCFLELLGLDSLKLRVDMKVANIILSYKCRNEDAQYSFIRESVAEKLSKLADGEKTTTEELLVLLEEGTWNSIQQQEIKRLSSESSSQWALVVQFCRLHNMKLSISYLRECAKANDWLQFIIHSQLHNYHPAEVKSLIQYFSPVIQDHLRLAFENLPSVPTSKMDSDQVCNKCPQELQGSKQEMTDLFEILLQCSEEPDSWHWLLVEAVKQQAPILSVLASCLQGASAISCLCVWIITSVEDNVATEAMGHIQDSTEDHTWNLEDLSVIWRTLLTRQKSKTLIRGFQLFFKDSPLLLVMEMYELCMFFRNYKEAEAKLLEFQKSLETLNTAATKVHPVIPAMWLEDQVCFLLKLMLQQCKTQYELGKLLQLFVEREHLFSDGPDVKKLCILCQILKDTSIAINHTIITSYSIENLQHECRSILERLQTDGQFALARRVAELAELPVDNLVIKEITQEMQTLKHIEQWSLKQARIDFWKKCHENFKKNSISSKAASSFFSTQAHVACEHPTGWSSMEERHLLLTLAGHWLAQEDVVPLDKLEELEKQIWLCRITQHTLGRNQEETEPRFSRQISTSGELSFDSLASEFSFSKLAALNTSKYLELNSLPSKETCENRLDWKEQESLNFLIGRLLDDGCVHEASRVCRYFHFYNPDVALVLHCRALASGEASMEDLHPEIHALLQSAELLEEEAPDIPLRRVHSTSSLDSQKFVTVPSSNEVVTNLEVLTSKCLHGKNYCRQVLCLYDLAKELGCSYTDVAAQDGEAMLRKILASQQPDRCKRAQAFISTQGLKPDTVAELVAEEVTRELLTSSQGTGHKQMFNPTEESQTFLQLTTLCQDRTLVGMKLLDKISSVPHGELSCTTELLILAHHCFTLTCHMEGIIRVLQAAHMLTDNHLAPSEEYGLVVRLLTGIGRYNEMTYIFDLLHKKHYFEVLMRKKLDPSGTLKTALLDYIKRCRPGDSEKHNMIALCFSMCREIGENHEAAARIQLKLIESQPWEDSLKDGHQLKQLLLKALTLMLDAAESYAKDSCVRQAQHCQRLTKLITLQIHFLNTGQNTMLINLGRHKLMDCILALPRFYQASIVAEAYDFVPDWAEILYQQVILKGDFNYLEEFKQQRLLKSSIFEEISKKYKQHQPTDMVMENLKKLLTYCEDVYLYYKLAYEHKFYEIVNVLLKDPQTGCCLKDMLAG", - "output": "axon ; cytoplasm ; cytoplasmic vesicle ; cytosol ; dendrite ; lysosomal membrane ; nucleolus ; plasma membrane ; synapse ; protein kinase binding ; autophagosome organization ; axo-dendritic transport ; axon extension ; chemical synaptic transmission ; cholesterol efflux ; corticospinal tract morphogenesis ; localization within membrane ; lysosome organization ; memory ; motor behavior ; motor neuron apoptotic process ; neuromuscular junction development ; phagosome-lysosome fusion involved in apoptotic cell clearance ; protein import into nucleus ; regulation of store-operated calcium entry ; skeletal muscle fiber development ; synaptic vesicle transport ; walking behavior" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MNLKSPLFLRLSDRLDVYIRLMRADKPIGTLLLLWPTYWALWLASDGIPDLAVLAAFTIGTFLMRSAGCVINDFADRDFDGAVERTKNRPFAQGRVKKKEALLLTAFLCLLAALCLIPLNHLTWLMSLPALFLALTYPFTKRFFPIPQFYLGFAFSFGIPMAFAAVGNSVPVEAWILFAANVLWTLAYDTVYAMADKEDDLKIGIKTSAVTFGRYDIAAVMLCHGGFTLLMAVLGAVIGAAWAYWTAIPIVLLLQYRQYAAIKSRVRQICFETFLANNRIGWVWFAAIFAHTFFAK", - "output": "plasma membrane ; 4-hydroxybenzoate decaprenyltransferase activity ; 4-hydroxybenzoate nonaprenyltransferase activity ; 4-hydroxybenzoate octaprenyltransferase activity ; ubiquinone biosynthetic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MVDYFDYNSLLTRAREQLPEEVFKDVRFEIPSADSFVEGNRTIIKNFKDIAKFMERDPQEFAKYVMKELGTAGDMEGVRLILQGKFGWRMVNEKIQNYVNEYVLCPECGKPDTKIVKEGRIHFLKCTACGAMKPVKTL", - "output": "translation initiation factor activity" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "SSTETPPSYNQLNYNENLLRFFNSKPVTAPVELDPPKVESSYVSSARGEDARSTLSPVQGFEGSGGSGSSGNFTTGSNLHMSSVTNTSNAGTGTSGTGNSGDGGGGGGADGPGSGAAPPVTLTESLLNKHNDEMEKFMLKKHRESRGRSGEKNKKSANDAMKMLEYSGPGPGHGHGIKRGGSHSWEGEANKPKQQLTLNTGGGGGGMPPFLDIQHTSSSTQNKGLAGVGVGGAGGGVVGVGSSAGGNGSGTGNNNGNGNNNQPTTNQFTQSGLSCTQNINLWPPFSVGITTPTSVLSSHTAVAQSSFSPQHSLFPTFYYIPASIAASSPSGTSPNPNRPHKHAHVHSSSEKPSTSQAAAATMPLQYMTGVMYPHPSLFYTHPAAAAATAMV", - "output": "nucleus ; perinuclear region of cytoplasm ; rhythmic process" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MPRFVDRVVIHARAGSGGNGCASVHREKFKPLGGPDGGNGGRGGSIVFVVDPQVHTLLDFHFHPHISAPSGKQGMGNNRDGAAGADLEVKVPDGTVVLDENGRLLADLVGAGTRFEAAAGGRGGLGNAALASRARKAPGFALLGEPGETRELTLELKTVADVGLIGFPSAGKSSLVSAISAAKPKIADYPFTTLVPNLGVVSAGEHTFTVADVPGLIPGASAGRGLGLDFLRHIERCAVLVHVIDCATADPGRDPISDIDALEAELAAYTPTLQGDVTLGDLTERPRAVVLNKIDVPEARELAEFVRDEIAERGWPVFLVSTVAREGLQPLIFGLWQMISEYQSAQPEIVPRRPVIRPVPVDDSGFRVEPDPRQPGAFVVSGARPERWVRQTNFDNDEAVGYLADRLARLGVEEELLRLGARPGCAVTIGDMTFDWEPQTPAGQQVVLSGRGTDARLERTERVGAAERKAARRQRRTGDDAERGTTERGENT", - "output": "cytoplasm ; GTP binding ; GTPase activity ; magnesium ion binding ; ribosome biogenesis" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MDTEYEQVNKPWNELYQETTLGNQLMVNVGMEDPEVPLLPSNFLTKVRVGLSGGYITMRRIRIKIIPLVSRKAGVSGKLYLRDISDTTGRKLHCTESLDLGREIRLTMQHLDFSVSTRSDVPIVFGFEELVSPFLEGRELFSISVRWQFGLSKNCYSLPQSKWKVMYQEDALNVKPSKKKASKTDSSV", - "output": "host cell membrane ; membrane ; viral capsid ; RNA binding ; transport of virus in host, cell to cell" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MEPNDSTSTAVEEPDSLEVLVKTLDSQTRTFIVGAQMNVKEFKEHIAASVSIPSEKQRLIYQGRVLQDDKKLQEYNVGGKVIHLVERAPPQTHLPSGASSGTGSASATHGGGSPPGTRGPGASVHDRNANSYVMVGTFNLPSDGSAVDVHINMEQAPIQSEPRVRLVMAQHMIRDIQTLLSRMETLPYLQCRGGPQPQHSQPPPQPPAVTPEPVALSSQTSEPVESEAPPREPMEAEEVEERAPAQNPELTPGPAPAGPTPAPETNAPNHPSPAEYVEVLQELQRLESRLQPFLQRYYEVLGAAATTDYNNNHEGREEDQRLINLVGESLRLLGNTFVALSDLRCNLACTPPRHLHVVRPMSHYTTPMVLQQAAIPIQINVGTTVTMTGNGTRPPPTPNAEAPPPGPGQASSVAPSSTNVESSAEGAPPPGPAPPPATSHPRVIRISHQSVEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPPGHGQTLGQQVPGFPTAPTRVVIARPTPPQARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQGTPGMAPPPAPATASASAGTTNTATTAGPAPGGPAQPPPTPQPSMADLQFSQLLGNLLGPAGPGAGGSGVASPTITVAMPGVPAFLQGMTDFLQATQTAPPPPPPPPPPPPAPEQQTMPPPGSPSGGAGSPGGLGLESLSPEFFTSVVQGVLSSLLGSLGARAGSSESIAAFIQRLSGSSNIFEPGADGALGFFGALLSLLCQNFSMVDVVMLLHGHFQPLQRLQPQLRSFFHQHYLGGQEPTPSNIRMATHTLITGLEEYVRESFSLVQVQPGVDIIRTNLEFLQEQFNSIAAHVLHCTDSGFGARLLELCNQGLFECLALNLHCLGGQQMELAAVINGRIRRMSRGVNPSLVSWLTTMMGLRLQVVLEHMPVGPDAILRYVRRVGDPPQPLPEEPMEVQGAERASPEPQRENASPAPGTTAEEAMSRGPPPAPEGGSRDEQDGASAETEPWAAAVPPEWVPIIQQDIQSQRKVKPQPPLSDAYLSGMPAKRRKTMQGEGPQLLLSEAVSRAAKAAGARPLTSPESLSRDLEAPEVQESYRQQLRSDIQKRLQEDPNYSPQRFPNAQRAFADDP", - "output": "BAT3 complex ; cytoplasm ; cytosol ; extracellular exosome ; intracellular membrane-bounded organelle ; membrane ; nucleoplasm ; nucleus ; Hsp70 protein binding ; identical protein binding ; misfolded protein binding ; polyubiquitin modification-dependent protein binding ; proteasome binding ; ribosome binding ; signaling receptor binding ; ubiquitin protein ligase binding ; ubiquitin-specific protease binding ; apoptotic process ; brain development ; cell differentiation ; chromatin organization ; endoplasmic reticulum stress-induced pre-emptive quality control ; ER-associated misfolded protein catabolic process ; immune response-activating cell surface receptor signaling pathway ; internal peptidyl-lysine acetylation ; intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator ; intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress ; kidney development ; lung development ; maintenance of unfolded protein involved in ERAD pathway ; natural killer cell activation ; negative regulation of apoptotic process ; negative regulation of proteasomal ubiquitin-dependent protein catabolic process ; negative regulation of proteolysis ; positive regulation of ERAD pathway ; post-translational protein targeting to endoplasmic reticulum membrane ; proteasomal protein catabolic process ; protein localization to cytosolic proteasome complex involved in ERAD pathway ; protein stabilization ; regulation of embryonic development ; regulation of protein stability ; spermatogenesis ; synaptonemal complex assembly ; tail-anchored membrane protein insertion into ER membrane ; ubiquitin-dependent ERAD pathway ; ubiquitin-dependent protein catabolic process" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MIDKYSSNLVPVNIEDEMKVSYLDYAMSVIVSRAIPDVRDGLKPVHRRIIYSMYEAGNHASKPYRKSARIVGDVMGKYHPHGDSAIYDSLVRMAQDFSLRLPLVDGQGNFGSMDGDAAAAMRYTESRMAKVAHKLVEDIDKGTVSFNINYDGSEEEPSVLPAMFPNLLVNGSGGIAVGMATNIPPHNLGEIIDACCLYIDNHDIEILDLLEVVKGPDFPTGSMILGISGIRSAYLTGRGSIIMRGKAEIENVGNSRQAIIITEIPYMVNKARLVEKIAEMVKEKRIEGISDLRDESNKNGIRIFIELKKDVVAEVVLNQIYACTQLQTNFGVIMLALKDGLPKVMNLKEVIAAFVSFREVVITNRTIYLLNKARDRAHILLGLTIAISNIDEIIYIIKASNDTNLAKQELMARQWEVLDILPLIKLVDDKVILNERGTLSFTEVQAKAILEMKLQRLTAMEKEKLEQDLKHLATDIAEYLNILASRTRLLEILKEELIKVKEEFASPRLTSIEFGEFDQDIEDLIQREEMVVTVTLGGYIKRVPLSSYRSQKRGGKGRSGLSMRDEDITTQVFVGSTHTPMLFFSNIGKVYSLKLYKLPLSNPQGKGRPMVNILSLQENEHITNIMPLPENQDEWDHLNIMFATAKGNIRRSDLLDFKKIQSNGKIAIRLDEDDKLIDVKPCKEDEHILLATKAGKALRFPVESLRIIKSRISDGVRGMKLAKEDSVISMTVLKGINSTKEDRDAYLTVPWEKRLEIAKGEEFNLEELGVNLNADSILEMANSEEFILTVTENGFGKRSSAYGYRITDRGGSGIINMDINDKTGLVVGVMPVKMDDELMLITNSGKLIRCKLESVRITGRNTSGVILFKLDDDEKVVSVSLIAETSESEEASELAEEGLENDVKV", - "output": "chromosome ; cytoplasm ; ATP binding ; DNA binding ; DNA negative supercoiling activity ; DNA topological change ; DNA-templated DNA replication" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MTDLIAKTAIDRRLAEIISPVIEDLGFELVRIRLQGGKTATLQIMADRPEGGINVDDCADISTAVSAILDVEDPLEDAYHLEVSSPGIDRPLTRLKDFETFEGYEARLETNQPIDGRKRFKGVLAGVEKGEGGDEVLLNIEEGGETQTIGLNFDWLSDAKLVLTDELIAEMLRQKKDAGVQIENLDEAAFDEIETEAGEDNAAAKE", - "output": "cytoplasm ; ribosomal small subunit biogenesis" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MSKELTAKKRAALNRLKTVRGHLDGIVRMLESDAYCVDVMKQISAVQSSLERANRVMLHNHLETCFSTAVLDGHGQAAIEELIDAVKFTPALTGPHARLGGAAVGESATEEPMPDASNM", - "output": "cytoplasm ; plasma membrane ; protein-DNA complex ; copper ion binding ; copper ion sensor activity ; DNA binding ; DNA-binding transcription repressor activity ; transcription cis-regulatory region binding ; negative regulation of DNA-templated transcription ; response to copper ion ; response to silver ion" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MAEPGFFNAMLIGALIFGYVLGSIPFGLILTRLAGLGDVRAIGSGNIGATNVLRTGNKKLAAATLILDALKGTAAALIAAHFGQNAAIAAGFGAFIGHLFPVWIGFKGGKGVATYLGVLIGLAWAGALVFAAAWIVTALLTRYSSLSALVASLVVPIALYSRGNQALAALFAIMTVIVFIKHRANISRLLNGTESKIGAKG", - "output": "plasma membrane ; acyl-phosphate glycerol-3-phosphate acyltransferase activity ; phospholipid biosynthetic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MFRIVNGEDYSPAVQQRNILDFGKAPSLLWTDNGSSNDRCDTGGNCRESGQDRVKRPMNAFIVWSRDQRRKVALENPQMQNSEISKRLGYDWKMLTEAEKQPFFEEAQRLRAMHRDKYPGYKYRPRRKAKEATEIASRRLFSTVQPNAHRGDLVPLHIQGHTFTNGKPVKPLTAHEHKQLTPATGASQQSDKPAPQ", - "output": "cytoplasm ; nuclear speck ; nucleus ; calmodulin binding ; DNA binding ; DNA-binding transcription factor activity ; cell differentiation ; male sex determination ; sex differentiation" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MIRIAIDVMGGDFGPDVAIPGAAKALERHNDVTFLLYGQKSKCDPILAQYPALREKSVFHDCEVSVSMDEKPSQALRRGRYVSSMWRAIEAVKLGEADVAVSAGNTGALMAMAKFCLRTMARVERPAIAGIWPTLKGESIVLDVGATIGADSQQLLDFALMGGAMARALFDIDRPTVGLLNVGVEEVKGQEEVREAGRLIREADLGTIDYRGFVEGDDIGKGTVDVVVTEGFTGNIALKAAEGTARQITTLLREAISRSFFAKIGYILAKSAFDVLREKMDPRKVNGGVFLGLNGIVIKSHGGTDAIGFASAVDVGYDMVHNGLTAKIENDLKIYHARRLPPPAPEALVADEE", - "output": "cytoplasm ; phosphate:acyl- acyltransferase activity ; fatty acid biosynthetic process ; phospholipid biosynthetic process" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MTIAVDLQGRPFHFIGIGGIGMSALAQVVTERQLPVSGSDIRRSHITDRLAQLGAQIFDRQAATNLEFFQEAVSAGQSPQVICSTAIHAHNEEYQAAIDLGCPVFHRSDLLAALLRVYESIAVAGTHGKTTTSGLIAYLLYQAGLDPTVVIGGEVNALGGNARLGQGRHLVAEADESDGSLVKLQAAIGIITNIELDHPDHYCDLEAVISTFKTFSDNCSQLIANWDCPTVRDRLPGTISYSLDPARGADYTVDQVSFRGSGTQARIWERGELLGRIHLPLLEAHNLSNALAAIAACRHLGMDFASIREGLAGFEGARRRFEFRGSAQGIQFVDDYAHHPSELAATLAAARLQIDSGCSRLPEVPKRLVAIFQPHRYSRTQAFLAEFAQSFGPADLVLISDIYAAGERNPGQLSGQTLADAIAQYQANVHYAPDLEAVEQRLHQLLQPGDLALFLGAGNLNQVIPRLLDHYACDRSAA", - "output": "cytoplasm ; ATP binding ; UDP-N-acetylmuramate-L-alanine ligase activity ; cell cycle ; cell division ; cell wall organization ; peptidoglycan biosynthetic process ; regulation of cell shape" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MGVRAQQKEKTRRSLVEAAFSQLSAERSFASLSLREVAREAGIAPTSFYRHFRDVDELGLTMVDESGLMLRQLMRQARQRIAKGGSVIRTSVSTFMEFIGNNPNAFRLLLRERSGTSAAFRAAVAREIQHFIAELADYLELENHMPRAFTEAQAEAMVTIVFSAGAEALDIGAEQRRQLEERLVLQLRMIAKGAYYWYRREQEKIAHHSE", - "output": "cytoplasm ; DNA binding ; DNA-binding transcription factor activity ; fatty acid biosynthetic process ; negative regulation of fatty acid biosynthetic process" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MEKFMAEFGQGYVQTPFLSESNSVRYKISIAGSCPLSTAGPSYVKFQDNPVGSQTFSAGLHLRVFDPSTGALVDSKSYAFSTSNDTTSAAFVSFMNSLTNNRIVAILTSGKVNFPPEVVSWLRTAGTSAFPSDSILSRFDVSYAAFYTSSKRAIALEHVKLSNRKSTDDYQTILDVVFDSLEDVGATGFPRGTYESVEQFMSAVGGTNDEIARLPTSAAISKLSDYNLIPGDVLYLKAQLYADADLLALGTTNISIRFYNASNGYISSTQAEFTGQAGSWELKEDYVVVPENAVGFTIYAQRTAQAGQGGMRNLSFSEVSRNGGISKPAEFGVNGIRVNYICESASPPDIMVLPTQASSKTGKVFGQEFREV", - "output": "virus tail, fiber ; adhesion receptor-mediated virion attachment to host cell ; viral entry into host cell" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MTQKNGPLRVGIGGPVGSGKTTLTEKLCKAMRDKYSVAVITNDIYTQEDALILARRQALSEDRIIGVETGGCPHTAIREDASINLQAVVEMTRRFPDLDVVFIESGGDNLAATFSPDLADLTLYVISVCQGEEIPRKGGPGITRSDFLVINKSDLAPYVHVDLEVMEADAMRMRAKRPFGFTDLHRGKGVQEIIDFIVENGGLEPRSN", - "output": "cytoplasm ; GTP binding ; GTPase activity ; nickel cation binding ; nitrogen compound metabolic process" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MALPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGIDDVDAPFMEQIKHQAEIAMEEADVIVFVVSGKEGITDADEYVARKLYKTHKPVILAVNKVDNPEMRNDIYDFYALGLGEPLPISSVHGIGTGDVLDAIVENLPNEYEEENPDVIKFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAIDTHFTDTDGQEFTMIDTAGMRKSGKVYENTEKYSVMRAMRAIDRSDVVLMVINAEEGIREYDKRIAGFAHEAGKGMIIVVNKWDTLEKDNHTMKNWEEDIREQFQYLPYAPIIFVSALTKQRLHKLPEMIKQISESQNTRIPSAVLNDVIMDAIAINPTPTDKGKRLKIFYATQVATKPPTFVIFVNEEELMHFSYLRFLENQIRKAFVFEGTPIHLIARKRK", - "output": "GTP binding ; ribosome biogenesis" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MAHLLLLHGPNLNLLGTREPEVYGRTTLAQIDAALVDRAQAAGHALDCLQSNAEHVLVERIHAAREDGTAYILINPAAFTHTSLALRDALLGVGLPFVEIHLSNPHAREPFRHHSYLSDKADGVICGFGADSYRLALEAVIARLECDA", - "output": "3-dehydroquinate dehydratase activity ; amino acid biosynthetic process ; aromatic amino acid family biosynthetic process ; chorismate biosynthetic process" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MSYRRELEKYRDLDEDEILGGLTEEELRTLENELDELDPDNALLPAGLRQKDQTTKAPTGPFRREELLDHLEKQAKEFKDREDLVPYTGEKRGKVWVPKQKPMDPVLESVTLEPELEEALANASDAELCDIAAILGMHTLMSNQQYYQALGSSSIVNKEGLNSVIKPTQYKPVPDEEPNATDVEETLERIKNNDPKLEEVNLNNIRNIPIPTLKAYAEALKENSYVKKFSIVGTRSNDPVAFALAEMLKVNKVLKTLNVESNFISGAGILRLVEALPYNTSLVELKIDNQSQPLGNKVEMEIVSMLEKNATLLKFGYHFTQQGPRLRASNAMMNNNDLVRKRRLADLTGPIIPKCRSGV", - "output": "actin filament ; COP9 signalosome ; cortical cytoskeleton ; membrane ; myofibril ; sarcomere ; striated muscle thin filament ; actin binding ; tropomyosin binding ; adult locomotory behavior ; lens fiber cell development ; muscle contraction ; myofibril assembly ; pointed-end actin filament capping" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MKSLDDLDFDNRFARLGDAFSTEVLPDPIAEPRLVVASPAALALLDLPAETSDEALFAELFGGHKLWSEAEPRAMVYSGHQFGSYNPRLGDGRGLLLGEVINQAGEHWDLHLKGAGQTPYSRMGDGRAVLRSSIREFLASEALPALGIPSSRALCVIGSSTPVWREKKESAATLLRLAPSHVRFGHFEYFYYTRQHDQLKQLAAFVQEHHFADCNAAERPYAAMFRQVVERNAELIARWQAYGFCHGVMNTDNMSILGITFDYGPYAFLDDFDANHICNHSDDAGRYSFSNQVPIAHWNLAALAQALTPLVEVDELRASLDLFLPLYQAHYLDLMRRRLGLGVAAENDQALVQELLQRMQGSAVDYSLFFRRLGEETPERALASLRDDFVDREAFDRWAEAYRRRVEEEGGDQESRRRRMHAVNPLYVLRNYLAQQAIEAAEQGDYTEVRLLHQVLSRPFEEQPGMERFTRRPPDWGRHLEISCSS", - "output": "ATP binding ; magnesium ion binding ; nucleotidyltransferase activity" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MGGKTVTRADLAEAVYRKVGLSRTESAALVEMILDEVCDAIVNGETVKLSSFATFQVRDKNERIGRNPKTGEEVPILPRRVMTFKASNVLKQRILQEHQKRQGKTSK", - "output": "DNA binding ; structural constituent of chromatin ; DNA recombination ; regulation of DNA-templated transcription ; regulation of translation" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MLTERQLLIFRAIIDHFTWTIQPVGSKNLLKEKSLPYSSATIRNEMGVLEEYGFIEKTHSSSGRVPSEKGYRFYVDYLLQPKKLDKSDRQMIRSFFSENYYEMEGLIQNSALMLSDLTNYTSILLGPEATKNHLSGFRFVPINNFQAMLILITDQGHVDNHLVTIPEGTTLSDIERMVNILNERLVGLSLDDLKVQIPMEVKELLGKHVRNYESFMHVFSDSFAQASQQKVYFGGKTNILNQPEFHDINKVREMLHLMEEEQDVYELFRDIPDGLQVKIGRENNNSLMEDCSIITATYNIAGERVGGIVLLGPTRMEYSRMMGLVDVMSRDLTDVLTKLYRDNQN", - "output": "DNA binding ; negative regulation of DNA-templated transcription" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MPTVFPDDSVGLVSPQTLHFNEPLELTSGKSLAEYDLVIETYGELNATQSNAVLICHALSGHHHAAGYHSVDERKPGWWDSCIGPGKPIDTRKFFVVALNNLGGCNGSSGPASINPATGKVYGADFPMVTVEDWVHSQARLADRLGIRQWAAVVGGSLGGMQALQWTISYPERVRHCLCIASAPKLSAQNIAFNEVARQATLSDPEFLGGYFQEQGVIPKRGLKLARMVGHITYLSDDAMGAKFGRVLKTEKLNYDLHSVEFQVESYLRYQGEEFSTRFDANTYLLMTKALDYFDPAAAHGDDLVRTLEGVEADFCLMSFTTDWRFSPARSREIVDALIAAKKNVSYLEIDAPQGHDAFLMPIPRYLQAFSGYMNRISV", - "output": "cytoplasm ; homoserine O-succinyltransferase activity ; methionine biosynthetic process" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MNEFDRVRDYLTDLQDRICAAVEAADGKARFAEDLWKREEGGGGRTRILRDGAVFEQAGIGFSDVSGTRLPPSASAHRPELAGATWRACGVSLVFHPHNPYIPTTHMNVRYFRAERDGEVVAAWFGGGFDLTPFYPFDEDVQHWHRVAQALCVPFGQERYAAHKRWCDEYFFLRHRNETRGVGGLFFDDLGQDFERDFAYQRAVGDGFLDAYIPIVQRRKDTPYGEREREFQLYRRGRYVEFNLVYDRGTLFGLQSGGRAESILMSLPPRVRWEYGFTPEPGSAEARLADYLIPRDWLG", - "output": "cytoplasm ; coproporphyrinogen oxidase activity ; metal ion binding ; protein homodimerization activity ; protoporphyrinogen IX biosynthetic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MATASQGKVTQVIGAVVDVQFDGGLPPILNALETENNGKRLVLEVAQHLGESTVRTIAMDATEGLVRGARVTDTGSPISVPVGDATLGRILNVIGEPIDEKGDLGEASTRAIHQPAPTFAEQSTTSEILVTGIKVIDLLAPYSKGGKIGLFGGAGVGKTVLIMELINNIAKVHSGYSVFAGVGERTREGNDLYHEMIESGVIKIDNLSESKVALVYGQMNEPPGARARVALTGLTLAEQFRDQSGTDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERITSTKAGSITSVQAIYVPADDLTDPAPATSFAHLDATTVLSRAISELGIYPAVDPLDSTSRILDPQIVGEEHYNVARAVQGILQRYKSLQDIIAILGMDELSEEDKLSVARARKIQRFLSQPFDVAKVFTGSDGVQVPLEKTIASFKAVVNGEYDHLPEAAFYMVGDIEDVIAKAQRLAAQAA", - "output": "plasma membrane ; proton-transporting ATP synthase complex, catalytic core F(1) ; ATP binding ; proton-transporting ATP synthase activity, rotational mechanism ; proton-transporting ATPase activity, rotational mechanism" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MKHTAEFLDTHQTQISSILSGGYNHPLLREWQNERQLAKNMFIFPLFVSDMPDEDQPIESLPNIRRFGVNKLAGYLKPLVAKGLRAVLLFGVPMKPNSKDEFGSAADDPEGPVIQAIKLLRAEFPELYILCDVCLCEYTSHGHCGVLYDDGSINREQSVRRLAAVAVNYAKAGAHSVAPSDMIDGRIRDIKLGLLAAGLAHKTFVMSYAAKFSGNLYGPFRDAACSAPSQGDRKCYQLPSGGRGLARRALRRDLDEGADGIIVKPSTFYLDIMADASEIAKDVPICAYHVSGEYAMLHAAAKAGVVDFKSIAFESHQGFLRAGARLIISYMTPEFLDWLS", - "output": "cytosol ; porphobilinogen synthase activity ; zinc ion binding ; heme biosynthetic process ; protoporphyrinogen IX biosynthetic process" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MAIPAFGLGTFRLKDDVVISSVITALELGYRAIDTAQIYDNEAAVGQAIAESGVPRHELYITTKIWIENLSKDKLIPSLKESLQKLRTDYVDLTLIHWPSPNDEVSVEEFMQALLEAKKQGLTREIGISNFTIPLMEKAIAAVGAENIATNQIELSPYLQNRKVVAWAKQHGIHITSYMTLAYGKALKDEVIARIAAKHNATPAQVILAWAMGEGYSVIPSSTKRKNLESNLKAQNLQLDAEDKKAIAALDCNDRLVSPEGLAPEWD", - "output": "cytoplasm ; aldo-keto reductase (NADP) activity ; aryl-alcohol dehydrogenase (NADP+) activity ; methylglyoxal reductase (NADPH-dependent, acetol producing) ; L-ascorbic acid biosynthetic process ; methylglyoxal catabolic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MAATLRELRGRIRSAGSIKKITKAQELIATSRIAKAQARVEAARPYSTEITSMLTELASASALDHPLLVARENPRRAAVLVVSSDRGLCGAYNANVLRQSEELFALLREEGKEPVVYTVGRKAQGYFNFRQREVTESWSGFSERPTYENAKEIADTLVASFMSGADDEGDDAGADGVLGVDELHIVFTEFRSMLSQSAAARRIAPMVVEYVGDEQPEDGPQTLFSFEPDPETLFDALLPRYVATRVYAALLEAAASESASRRRAMKSATDNADDLIKALKLSANRERQAQITQEISEIVGGANALADSR", - "output": "plasma membrane ; proton-transporting ATP synthase complex, catalytic core F(1) ; ATP binding ; proton-transporting ATP synthase activity, rotational mechanism ; proton motive force-driven plasma membrane ATP synthesis" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MINIPTSILCRLGARSAISRSFGTSVVTKSEAKTPIQKFGWEYLKKQRDMKRPIAPHLTIYQPQLTWMLSGFHRISGCVMAGTLLVGGLGFAVLPLDFTTFVEYIRGWNLPCAVTAVFKYIIAFPIIFHTLNGIRFLGFDLAKGVDNIGQVYKSGWLVFGVSAVIALAIVINSCQNKSKAVKTA", - "output": "mitochondrial inner membrane ; mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone) ; electron transfer activity ; heme binding ; metal ion binding ; succinate dehydrogenase activity ; defense response to Gram-negative bacterium ; determination of adult lifespan ; innate immune response ; mitochondrial electron transport, succinate to ubiquinone ; negative regulation of response to oxidative stress ; positive regulation of response to oxidative stress ; response to oxidative stress ; tricarboxylic acid cycle" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MTKTKQEIYNKRPTSPHLSIYKLQISSTLSILHRMTGVALFFAVSILAWWLILSKYDNNYLQFANCCIIKICLVAVSYAWFYHLCNGIRHLFWDIGYGFSIKAVNITGWCVVVCSILLTMLLWV", - "output": "plasma membrane ; succinate dehydrogenase complex ; electron transfer activity ; metal ion binding ; succinate dehydrogenase activity ; tricarboxylic acid cycle" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MALPLDFEKPLFELETKIDELRTFSQEKDLDFSSEIATLEQKAEELRKKIYRDLTPWQQAQLARHPDRPNTIEYIRLLFEEFYEMKGDRLYGDDPAIVGGIARFQGRPVTVIGHVKGKDTKENIYRNFGMPHPEGYRKALRLMRQAAKFSRPIICFIDTPGAYCGIGAEERGQAEAIARNLLEMAALPVPIISVIIGEGGSGGALALGVADRLLMLEHAVYSVASPESAASILFKDASLAPQAAAAMGITAERLKDLKLIDRIVPEPSGGAHRNPIGTAKELATALSEEIENLLALSAQELVDSRYAKYRNLGLHCIEDASCGTFEAEATDASGT", - "output": "acetyl-CoA carboxylase complex ; acetyl-CoA carboxylase activity ; ATP binding ; carboxyl- or carbamoyltransferase activity ; fatty acid biosynthetic process ; malonyl-CoA biosynthetic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MSIRIKLKPGREKSLDRRHPWVFSSGVHNIKGKPLRGETVDVVAHDGRWLGRGAWSDASQIQVRVWTFDKEEAIDRDFFARRIARAQAGREALIREKGLTGYRLVGAESDGLPGITIDRYANVLVCQLLSAGADYWRETLVSVLAEQFPECAIYERSDVDSRKKEGLPLVTGLLHGELPAMPLIIEENGIKIAVDVEKGHKTGFYLDQRDNRAMAGRFVEGKSVLNCFCYTGTFGLYAAKAGAASIENVDVSTLALDTARHNMAINGLNDDHVTYSEADVFKLLRQYRDEGKTFDVIVLDPPKFADNKAQLNGACRGYKDINMIAMQLLKPGGTLLTFSCSGLMPADLFQKIVADAALDAGRDAQFIERLSQASDHPIGAAFPEGFYLKGLVARVW", - "output": "cytoplasm ; RNA binding ; rRNA (cytosine) methyltransferase activity" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MSEDLSKLHTSRMNKLQRKLRGEVGKAIGDYNMIEEGDRVMCCLSGGKDSYAMLDILLNLQQRAPIKFEIVAVNLDQKQPGFPEEVLPAYLDTLNVPYHIIEKDTYSVVREKIPEGQKTCSLCSRLRRGTLYGFAQKIGATKIALGHHRDDIIETLFLNMFFAGKQKAMPPKLLSDDGANMVIRPLAYSREKDIAEYAELKAFPIIPCNLCGSQENLKRAEVKDMLNLWDEHHPGRIESIFTAMQNTSPSQGVDREQFDFNSLQRDADAPLRGDVAESDLPAFDFVDVANNGHIDLDAAAKSRSENKIDIVSTYTP", - "output": "cytoplasm ; 4 iron, 4 sulfur cluster binding ; ATP binding ; magnesium ion binding ; sulfurtransferase activity ; tRNA binding ; tRNA thio-modification" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MKKRIPTLLATMIATALYSQQGLAADLASQCMLGVPSYDRPLVQGDTNDLPVTINADHAKGDYPDDAVFTGSVDIMQGNSRLQADEVQLHQKEAPGQPEPVRTVDALGNVHYDDNQVILKGPKGWANLNTKDTNVWEGDYQMVGRQGRGKADLMKQRGENRYTILDNGSFTSCLPGSDTWSVVGSEIIHDREEQVAEIWNARFKVGPVPIFYSPYLQLPVGDKRRSGFLIPNAKYTTTNYFEFYLPYYWNIAANMDATITPHYMHRRGNIMWENEFRYLSQAGAGLMELDYLPSDKVYKDEHPNDDSSRRWLFYWQHSGVMDQVWRFNVDYTKVSDPSYFNDFDNKYGSSTDGYATQKFSVGYAVQNFNATVSTKQFQVFSEQNTSSYSAEPQLDVNYYQNDVGPFDTRIYGQAVHFVNTRDDMPEATRVHLEPTINLPLSNNWGSINTEAKLLATHYQQTNLDWYNSRNTTKLDESVNRVMPQFKVDGKMVFERDMEMLAPGYTQTLEPRAQYLYVPYRDQSDIYNYDSSLLQSDYSGLFRGRTYGGLDRIASANQVTTGVTSRIYDDAAVERFNISVGQIYYFTESRTGDDNITWENDDKTGSLVWAGDTYWRISERWGLRGGIQYDTRLDNVATSNSSIEYRRDEDRLVQLNYRYASPEYIQATLPKYYSTAEQYKNGISQVGAVASWPIADRWSIVGAYYYDTNANKQADSMLGVQYSSCCYAIRVGYERKPNGWDNDKQHAVYDNAIGFNIELRGLSSNYGLGTQEMLRSNILPYQNTL", - "output": "cell outer membrane ; Gram-negative-bacterium-type cell outer membrane assembly ; lipopolysaccharide transport ; response to organic substance" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MSTTPVVNFITGNANKLREVKAILEPGITVQSKTVNLEEVQGTVEEVTLAKCRKAAEIIQGPVLVEDTCLCFKALNDLPGPYIKWFMESIGHQGLNNLLVAYEDKSADAVCTFAYSPGPGHEPILFQGRTRGKIVPPRGPADFGWDAIFEYDGQTYAEMDKTAKNNISHRGLALRKLQDWFAQQ", - "output": "cytoplasm ; nucleus ; dITP diphosphatase activity ; ITP diphosphatase activity ; metal ion binding ; nucleotide binding ; XTP diphosphatase activity ; deoxyribonucleoside triphosphate catabolic process ; nucleotide metabolic process" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MIHFTKMHGLGNDFMVVDGVTQNVFFSPEQIRRLADRNFGIGFDQLLLVEPPYDPDLDFHYRIFNADGSEVEQCGNGARCFARFVRNKGLTQKNKIRVSTNSGKITLRIERDGNVTVNMGVPVIEPSQIPFKAKKSEKTYLLQTPMQTYLCGAISMGNPHCVIQVEDVQTVNVDEIGSSLTRHERFPKGVNVGFMQVINPGHIKLRVYERGAAETLACGTGACAAAAVGQLQDKLDKQVRVDLPGGSLIINWEGEGKPLWMTGPAEHVYDGQIQL", - "output": "cytoplasm ; diaminopimelate epimerase activity ; lysine biosynthetic process via diaminopimelate" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MDSPCQPQALNQALPQLPGSVSESLESSRARMGVESYLPCPLLPAYHRPGASGEASAGNGTPRTTATATTTTASPLREGFGGQDGGELWPLQSEGAAALVTKECQRLAAQGARPEAPKRKWAKDGGDAPSPSKRPWARQENQEAKGESGMGCDSGASNSSSSSSNTTSSSGEASARLREEVQPSAPERLALDYIVPCMRYYGICVKDNFLGAVLGGRVLAEVEALKWGGRLRDGQLVSQRAIPPRSIRGDQIAWVEGHEPGCRSIGALMAHVDAVIRHCAGRLGNYVINGRTKAMVACYPGNGLGYVRHVDNPHGDGRCITCIYYLNQNWDVKVHGGLLQIFPEGRPVVANIEPLFDRLLIFWSDRRNPHEVKPAYATRYAITVWYFDAKERAAARDKYQLASGQKGVQVPVSQPTTPT", - "output": "cytoplasm ; nucleoplasm ; nucleus ; 2-oxoglutarate-dependent dioxygenase activity ; ferrous iron binding ; L-ascorbic acid binding ; oxygen sensor activity ; peptidyl-proline 4-dioxygenase activity ; cell redox homeostasis ; cellular response to hypoxia ; peptidyl-proline hydroxylation to 4-hydroxy-L-proline ; positive regulation of protein catabolic process ; regulation of neuron apoptotic process ; response to hypoxia" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MNLLEHMGKAAKQASWQLAMLSTAKKNQALAVIANLLESESQTILQANERDMAAARESGMSEALLDRLLLTPARLAAIANDVRQVCRLNDPVGRVIDGSLLDSGLKLERRRVPLGVIGVIYEARPNVTIDVASLCLKTGNAVILRGGKETHHTNQATVNVIQRALEQCGLPAAAVQAIESPDRQLVNELLRLDRYVDMLIPRGGASLHKLCREQSTIPVITGGIGVCHTFVDENADFEKALLVIENAKIQRPSACNSLETLLVHQAVAKTFLPLLSARMHAFGVTLHASPLAMPYLADGKAKVVAVEAADYDDEWLSLDLNVDIVTDIDAAIDHIREHGTSHSDAILTRSLSHAEYFVRAVDSSAVYVNASTRFTDGGQFGLGAEVAVSTQKLHARGPMGLDALTTYKWIGYGDDLVRS", - "output": "cytoplasm ; glutamate-5-semialdehyde dehydrogenase activity ; NADP binding ; L-proline biosynthetic process" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MTKQSIRAREFKRIILAKKFFAKRIKLKQIISNIHSSSEERWNAIIKLQQLPRDSSRSRQRNRCSQTGRPHAFLRKFGLSRIKVREAAMRGEIPGLRKASW", - "output": "cytoplasm ; ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MSTGNVYQELIRRYLVVVKKLYEEPIPQTARQRRRRKQQLRTRRAQLRELEGRILKQILDRGPDQLCQGVTNLALAEKSESSN", - "output": "host cell cytoplasm ; host cell nucleolus ; RNA binding ; mRNA transport" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MALETNTHRSYSIIPCFIFVELVIMAGTVLLSYYFECTDTFQVHIQGFFCQDGNLMKPYPGTEDESFISPLVLYCVLAATPTAIIFIGEVTTYFIKSTRENLIVQEKMILTGECCYLNPLFRRIIRFIGVFAFGLFATDIFVNAGQVVTGNLTPYFLTVCKPNYTASDCLIYHQFINSANICTGDPEVIEKARRSFPSKHAALSIYSALYATMYITSTIKTKSSRLAKPVLCLGTLCCAFLTGLNRVSEYRNHCVDVIGGFILGTAIALFLGLCVVHNFKGLYGAQCKPKPEDPRGVPLMAFPRVESPLETLSAQNHSSSMTEVT", - "output": "neuron projection ; plasma membrane ; nervous system development ; phospholipid metabolic process" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MKNKILVKNNELTVDISAFDDKDEVLSLQRKNFNLILGKDSFLRGFDANLIGQKSLPLYEFSMVIPSDFKDEKLRGKTLDFKVHNKAKIKVNSETNLDKEKIKSLEKELANQKEKNALLLLDNVKLKSEKEKIIKDFKDEIKTFENRAREKIAEKLNLEKQLLENKFEDFKKYGSQKIFESIMPIIQNLLVAIE", - "output": "cytoplasm ; peptidyl-prolyl cis-trans isomerase activity" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MDPAPTLAAELWRTPYLGGGGGGGGGGRGLEAAASGVTEQSNGSRGGGGGGGAGRRRQREAPALEDDSSRIVSTSGGGGGGQDLTDSEAKRFKASKSSGDNSSLRTEAETDSRNASKSGDQNPPPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFLSMKLEAVNAHVNNGIEAFPPKDFGAQVYNTAPGLTFDPQTPREYAQGSTPSEWLHMQIGGTYERVT", - "output": "nucleus ; DNA binding ; DNA-binding transcription factor activity ; protein dimerization activity ; regulation of DNA-templated transcription" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MAKAKFERTKPHVNIGTIGHVDHGKTTLTAAITKVLHDKYPDLNESRAFDQIDNAPEERQRGITINISHVEYQTDKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMPQTREHVLLARQVGVPYILVALNKADMVDDEELLELVEMEVRELLAAQEFDEDAPVVRVSALKALEGDAKWVESVEQLMEAVDESIPDPVRETDKPFLMPVEDVFTITGRGTVVTGRVERGVINVNEEVEIVGIRPSSTKTTVTGVEMFRKLLDQGQAGDNVGLLLRGIKREDVERGQVVTKPGTTTPHTEFEGQVYILSKDEGGRHTPFFNNYRPQFYFRTTDVTGVVTLPEGTEMVMPGDNTNISVKLIQPVAMDEGLRFAIREGGRTVGAGRVVKIIK", - "output": "cytoplasm ; GTP binding ; GTPase activity ; translation elongation factor activity" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MSNKKRSASSSRWLQEHFSDKYVIQAQKKGLRSRAWFKLDEIQQSDKLFKQGMTVVDLGAAPGGWSQYAVTQIGSKGRVIACDLLPMDPIVGVDFLQGDFRDELVLKALLERVGDKKVQVVMCDMAPNMSGTPAVDIPKSMYLVELALDMCRDVLAPGGSFLVKVFQGDGFDEYLREIRSLFTKVKIRKPDASRARSREVYIVATGRKL", - "output": "cytoplasm ; rRNA (uridine-2'-O-)-methyltransferase activity" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MAITKEDILEAVGSLTVMELNDLVKAFEEKFGVSAAAVAVAGPAGAGAADAEEKTEFDVVLASAGDQKVGVIKVVRAITGLGLKEAKDIVDGAPKTIKEGVSKAEAEDIQKQLEEAGAKVEIK", - "output": "ribonucleoprotein complex ; ribosome ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MPMTMSQAFIGNFLGNSPKWYKIAILSFLIINPILFFYVSPFVAGWVLVLEFIFTLAMALKCYPLQPGGLLAIQAVAIGMTSASQVLHEIEANLEVLLLLVFMVAGIYFMKQLLLFAFTKMITKVRSKILVSLMFCLASAFLSAFLDALTVIAVIITVAVGFYSIYHKVASGKDFSADHDHTSEGKNEDGENQLNEEELESFRGFLRNLLMHAGVGTALGGVCTMVGEPQNLIIAAQANWQFGEFAIRMSPVTVPVLFAGILTCFLVEKLRWFGYGAQLPEAVHKILCDYAAYEDARRTNKDKMKLVIQAFVGVWLIAGLALHLASVGLIGLSVIILTTAFNGITDEHALGKAFEEALPFTALLAVFFAVVAVIIDQQLFGPVIQWALNHEGNTQLVIFYIANGLLSMVSDNVFVGTVYINEVKAALINGQITRDQFDLLAVAINTGTNLPSVATPNGQAAFLFLLTSALAPLIRLSYGRMVWMALPYTIVLSIVGVMAIESGFLEQMTQYFYDSHAIIHHSVKEALAPAAAH", - "output": "plasma membrane ; sodium:proton antiporter activity" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MAPSSAHNNGFYVLMLVGIVVSTMVATCAGSFYQDFDLTWGGDRAKIFNGGQLLSLSLDKVSGSGFKSKKEYLFGRIDMQLKLVAGNSAGTVTAYYLSSQGPTHDEIDFEFLGNLSGDPYILHTNIFTQGKGNREQQFYLWFDPTRNFHTYSIIWKPQHIIFLVDNTPIRVFKNAEPLGVPFPKNQPMRIYSSLWNADDWATRGGLVKTDWSKAPFTAYYRNFKAIEFSSKSSISNSGAEYEANELDAYSRRRLRWVQKYFMIYNYCSDLKRFPQGLPAECKR", - "output": "apoplast ; hydrolase activity, hydrolyzing O-glycosyl compounds ; polysaccharide binding ; xyloglucan:xyloglucosyl transferase activity ; cell wall biogenesis ; xyloglucan metabolic process" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MLSKRILPCLDVKAGRVVKGVNFVDLKDAGDPVELAKVYNDAGADELVFLDITATHEDRDTIIDVVYRTAEQVFIPLTVGGGIQSLENVKALLRAGADKVSINSAAVRDPELIDRASDRFGNQCIVVAIDARRRVDPSNPGWDVYVRGGRENTGLDALSWAKEVEKRGAGELLVTSMDADGTQAGYDLELTRAIAESVEIPVIASGGAGNCEHIYTALTEGKAEAALLASLLHYGQLSVAEIKNYLRDCQVPVRLYA", - "output": "cytoplasm ; imidazoleglycerol-phosphate synthase activity ; lyase activity ; histidine biosynthetic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MAKLRPYYEESQSAYDISDDFFALFLDPTWVYTCAYFERDDMTLEEAQLAKVDLALDKLNLEPGMTLLDVGCGWGGALVRAVEKYDVNVIGLTLSRNHYERSKDRLAAIGTQRRAEARLQGWEEFEENVDRIVSFEAFDAFKKERYLTFFERSYDILPDDGRMLLHSLFTYDRRWLHEQGIALTMSDLRFLKFLRESIFPGGELPSEPDIVDNAQAAGFTIEHVQLLQQHYARTLDAWAANLQAARERAIAVQSEEVYNNFMHYLTGCAERFRRGLINVAQFTMTK", - "output": "cis-trans isomerase activity ; methyltransferase activity ; lipid biosynthetic process ; methylation ; mycolic acid biosynthetic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MGKSLADKQELVAEIKDLLKDAQLTFVIDYKGLTVAEITDLRNRLRPAGAYCKIAKNTLMHIAVDGDETWQPVQSLLKDSSAFLIAGEDVASAVKAYKEFRKATKKTELRGGVMEGQALTSDQIEALGDLPTKDQLYGQIAGAINAVTAKIAIGINEVPGSLARAIKAVSEKEAA", - "output": "large ribosomal subunit ; large ribosomal subunit rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MTELVLIMVSAILVNNFVLVQFLGLCPFMGVSKKIETAIGLSLATTFVLTLAAMCSYLVQQYVLKPLDLEFLRTISFILVIAVTVQFTEMVVNKTSPLLYRVLGIFLPLITTNCIVLGVALLNANKAEFTFITATVNGFAAGLGFSLVLVLFAAMRERIAIADVPKSFQGAAIGMITAGLMSLAFMGFAGLIKL", - "output": "plasma membrane ; electron transport chain" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MKVSIFKTLYFQVLTAITIGVLLGHFYPEIGAQMKPLGDGFVKLIKMIIAPVIFCTVVTGIAGMESMKAVGRTGAIALLYFEIVSTLALLIGLVVVNVAQPGVGMNIDPATLDAKAVALYAEQASQQGIIPFLLDIIPGSVVGAFASGNILQVLLFAVLFGFALHRLGEKGQLIFNVIESFSRVIFGVINMIMRLAPLGAFGAMAFTIGKYGVGSLVQLGQLILCFYLTCILFVVLVLGTIAKFNGFNIFKFIRYIKEELLIVLGTSSSESVLPRMLDKMENAGCKKSVVGLVIPTGYSFNLDGTSIYLTMAAVFIAQATNTHMDIMHQVTLLVVLLLSSKGAAGVTGSGFIVLAATISAVGHLPLAGLALILGIDRFMSEARALTNLVGNGVATIVVAKWCKQLDNDQLQAVLSNKVLPNVKSSVSVS", - "output": "plasma membrane ; symporter activity ; dicarboxylic acid transport" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MARKPGRPGGNRVVNMLKRTAANAASPLGLAKRLLGDAFAGRGPLRVILAVVAFFRFTAIKMSPALLKKWGTVEKGAAIAIMKSFKKEIGSMLDVVARRKTKNKGKRSVESSALLVLLTACLALGFKVVTGPEGPIMDVTKKDVGKALEIPFQNFNNTCWVMAMDVGHPCEDTIEYECPSLDIGAEPNDIDCWCDTMPMRVRYGRCTKGSIPKRSRRNAVFPQHTENVLATRQETWMNTDVIMKHLIKVETWALRNPGFALVAITLGWMLGSNRSQKIIFTILLLLVAPAYNMRCIGVENRDFVEGLSGGTWVDVVLEHGGCVTVRVEGKPTLDFELVQTKATGLAAVRAYCYQAKVSDIQISAACPAVQLTENSKATDSNYLCRRGVTNRGWNNGCGLFGKGDIHTCVKFKCEKKAAGFSIGKENLEYEVRASVHNSIGADKFSNELADGEPHTQKMKFSPLSPSAEKSFGDYGTLGMDCEPQSGLDFGQLYLMTIESKSWLVNRDWYHDLHLPYTVGSGSQWNNREALVEFQEPHATKQEVLALGSQEGALHSALAGAIMANRETSSPHALLLTAGHLKCRIKMDKMVIKGITYGQCSGTFKMEKHPADTGHGTVVLDVSYQGDDAPCKIPIVITSNLAEVEPVGRLVSAHPVITAKNVRTMLEVEPPYGDSYIVIGVGDGRLKQHWFKKGSVIGGAFSTTMKGAKRLAVLGDAAWDFGSVGGVFNSLGKAVHQLFGGIFRTLFGGMSWLSRLMIGALCLWIGINARDHSIAVTMLSVGGILIFLSINVSADTGCVVDIERKELKCGSGIFIMNDIEAWRDEYAFHPSGPKALAASVVEAFSQGVCGVRSVNRLEHKMWESIADELNAILEENEREITIVVKDMENPAQKGKMRLRPVEKELKYGWKKWGASFFKRASRKNATFLVDGPSGEECPNSNRAWNSFFIEDFGFGVFKTSVWLGLNEQMTEVCDTKMIGTGVKNDRAVHSDLGYWIESRKNLTWEISRARLIETKACIWPRSHTLWSDGIEETQLIIPKSLGGPRSRHNMRSGYKTQINGPWDQIPLDIKFEECPGTSVTVTPNCGGRGPSARSTTASGKVIADWCCRDCILPPLTFRSGETCWYAMEIRPVSEREETLIRSKVSAGDGNEIDTFSLGLLVAMLVTQEGLRKRWATRHIMVASLTMLAAMVTGHITYRDLLRYVVLLGATFAQINDGGDVMHLALVAVFKVQPGFLLGFLLRRRWTPRESMLLAISACFLHLVFSELSTDITTLAHNFSLALLILRAIIQTDVSSVTLPVLSMMAPSFQLSVLGTFRMAVAVYVIVNLMMSKRNDAVKKAAPSVVAAALGQFGMVNATAALGTLYVLEKHGKRSWPPSEIFSAVGVLCALVGALGNVQSTPLAGPMAACGLLIAAYVVTGKSTDIEIERAGLISWSEDAEVSGSSPRVDVALDENGDFSLIDGQGPSLESVILKTALVAFSGLFPVSIPFCAAAWYLHGKSGRRAGALWDIPAPREVKKGSTENGVYRILANRLFGKTQVGVGVMHEGVFHTMWHVTRGAALKSGEGRLDPYWGDVKKDLISYGGPWKLEGRWDGVSEVQLIAVPPKEKAKNVQTTPGVFKTPHGEIGAIVLDFPAGSSGSPIINKLGEVIGLYGNGLMMGDAYASSIAQAEVEDEPDTPNCLPPDVTHKKKLTVLDLHPGAGKTRKVLPKLLQEALEKRLRTVVLAPTRVVAAEMAEALKGMPIRYQTAAVTSSHSGNEIIDLMCHATFTSRLMQPHRVPNYNLYIMDEAHFTDPASIAARGFIATKVSLGEAAAVFMTATPPGSDNPFPASNAPITDTEAQIPDKAWSTGFDWITEYGGKTVWFVPSVRMGNEIAACLTKAKKKVIQLSRRTFNTEYPKCKQGDWDFVVTTDISEMGANFKATRVIDSRRAIKPSIMQDQEERVVLSGPTPISPASAAQRRGRVGRNPNQLGDEYVFSGLTQANDEGNACWTEARMLLDNIHMQNGLIAQLYGPEQDKCFATDGEFKLREKERATFLEFLKADLPVWLSFKAASSGVQYHDRKWCFDGPDNNLVLEDNVPVEIWTKSGERKKLKPRWSDARTYCDHGALTAFKEFAGGRRSVTTGLLEGVGRLPEHLGQRLKESIDTLYLAFTAEVGSRPHREAMQEMPAALETVLVFFLLMIMTGCTFFLLMRHKGINKMGYGMVVMSAVGGLLWYGNVPAPKIAGILLLTFLLMVVLIPNPEKQRSIQDNQLALVVLGCLMFLGGIAANEMGMLERTKQDLAGVFHKTERKSTEFTLLTPPDLRPATAWSIYAIGTTLITPLIHHMITTHYANFSLMAMANQAGSLFGMQTGAPFSKMDWAVPAIVVGCWQQLTPATLMTALVLLAVHYIYMIPGWQAGAARAAQRRTAAGIMKNPVVDGLVVTDIPTLEEVDPLVEKKLGQYILLAVAIAAAVLRQDLQSWSECATLSAAAAATLWEGSPGKIWNASTACSLVNIFRGHTLAAVPFMFTILRNTGNTGKRGGVEGETLGEKWKHLLNAMDKYEFSRYKVNGIFEVDREPARMALANGLVTSGHAVSRGSAKLRWMVERAAVRPTGRVIDLGCGRGGWSYYCATLKQVQEVRGYTKGGPGHEEPRMVQSYGWNIVTLKSGVDVFHRPAEVGDTILCDIGESSATPEVEEARTLKVLEMVEPWLKNKPEFCIKVLCPYRPKVIERLSALQRTYGGGLVRVPLSRNSTHEMYWTSGTAGNIINAVNLTSKVLLHRMEKKWIGPRYEKDVNLGSGTRAVIVKRKAPDMDKIGNRVKRLKEEHIATWCYDDMNPYRTWNYHGSYEVKPTGSASSMINHVVKMLSKPWDTLNSVTSISMTDTTPFGQQRVFKEKVDTKAPEPPTGVAEVMDIISDWTWRLLSRQKKPRLCTRDEFKAKVNNHAAMGSIFEEEHQWQTAKEAVEDPGFWALVDREREAHLAGRCETCVYNMMGKREKKLGEFGKAKGSRAIWYMWLGARFLEFEALGFLNEDHWLSRENSYAGVEGLGLQRLGYVLRDISRRPGGKMYADDTAGWDTRITEKDLDNEAKIIDQMEGEHKQLAKAIMELTYRHKVVKVMRPGPGGKTYMDIISREDQRGSGQVVTYALNTFTNMIVQLTRCAEAEGVLIPSMRERKLTPAEHRALLLWLDTEGVKRLKKMAISGDDCVVKGEDERFATALYFLNAMAKVRKDIQEWKPSSGWADWQEVPFCSHHFKELQLKDGRTIVVPCRHQDELVGRARVSPGAAWTVRESAGLAKAYAQMWKLMYFHRRDLRLMANAICSAVPKDWVPTGRTTWSIHGKGEWMTNEDMLEVWNRVWIRENPHVEDKTEVADWKDVPYLGKREDQWCGSLIGSRTRATWAENIWVAVNQVRAKIGKEEYSDHLSSQQRFENWGEVRFSGVL", - "output": "extracellular region ; host cell endoplasmic reticulum membrane ; host cell nucleus ; host cell perinuclear region of cytoplasm ; membrane ; viral capsid ; viral envelope ; virion membrane ; ATP binding ; ATP hydrolysis activity ; double-stranded RNA binding ; metal ion binding ; mRNA (guanine-N7-)-methyltransferase activity ; mRNA (nucleoside-2'-O-)-methyltransferase activity ; protein dimerization activity ; RNA helicase activity ; RNA-dependent RNA polymerase activity ; serine-type endopeptidase activity ; structural molecule activity ; clathrin-dependent endocytosis of virus by host cell ; fusion of virus membrane with host endosome membrane ; induction by virus of host autophagy ; proteolysis ; suppression by virus of host JAK-STAT cascade via inhibition of STAT1 activity ; suppression by virus of host JAK-STAT cascade via inhibition of STAT2 activity ; suppression by virus of host type I interferon-mediated signaling pathway ; viral RNA genome replication ; virion attachment to host cell" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MKTLVSYDIVEDKVRRKVFEACKDYGLTNVQYSLFFGDMTHNRREELFQRLRRIIGRQEGKVLICPVCDKDLRLSKAIEVSAGMPEEAAEAAVSYPGRSRKKARAG", - "output": "metal ion binding ; RNA endonuclease activity ; defense response to virus ; maintenance of CRISPR repeat elements" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "GLFTLIKGAAKLIGKTVAKEAGKTGLELMACKITNQC", - "output": "extracellular region ; defense response to Gram-negative bacterium ; defense response to Gram-positive bacterium ; killing of cells of another organism" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MSSQSLYKVSGNIAANALVNNDKYKTMYQESIVNPEGFWREHGKRIDWIKPYTKIKKTSFDDHNLSINWFYDGTLNASANCLDRHLAEHSDRVAIIWEGDNASEQRKITYGELHADVCKFANALRSQGVRRGDIVTIYMPMVPEAAVAMLACARIGAVHSVVFGGFSPDSIASRVIDGKSKVIITSDEGMRGGRAIPLKRNIDDALKNPDVTTVEKVIVLKRTGGKVDWVEGRDVWWHSLMETASEYCQPEEMDAEAPLFLLYTSGSTGNPKGVLHTTGGYMVYASMTHEYVFDYKAGEVYWCTADVGWITGHSYMVYGPLANGATVLIHEGVPNHPSPARLGEMIDRHKVSILYTAPTLIRALMAEGKQHFDKFDGSSLRIMGSVGEPINPEAWRWYHEVIGHEHCPIVDTWWQTETGGILITPLPGATDTKPGSATRPFFGVQPALVDNMGNILEGENEGNLVLLDSWPGQMRTVYGDHERFVLTYFKTFRGMYFTGDGARRDEDGYYWITGRVDDVINVSGHRLGTAEVESALVSHELVAEAAVVGYPHDIKGQGIYAYVTLTRGTEETEELRQELRQWVRKEIGALATPDLIQWATGLPKTRSGKIMRRFLRKIAANEVTNLGDASTLADPAVIETLIESRLNRTE", - "output": "acetate-CoA ligase activity ; AMP binding ; ATP binding ; metal ion binding ; acetyl-CoA biosynthetic process from acetate" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MFTSAHANRSAQASASAGHYAHRSGEQTANGLISEIVYREDQPMMTQLLLLPLLQQLGQQSRWQLWLTPQQKLSREWVQSAGLPLSKVMQISQLSPCHTVDSMIRALRTGNYSVVICWLTEELTAEEHERLVNAAQEGCAMGFIMRPVRNQGTLGRQLSGLKIHSNLYH", - "output": "division septum assembly ; negative regulation of cell division ; SOS response" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MLTFARQQQRRNVRWLLSLSLLVLLATLLSLCAGEQWIAPGDWLSARGELFVWQIRLPRTLAVLLVGAALALSGAVMQALFENPLAEPGLLGVSNGAGVGLIAAVLLGQGQLAGWALGLCAIAGALIITLILLRFARRHLSTSRLLLAGVALGIICSALMTWAIYFSTSFDLRQLMYWMMGGFGGVDWQQSWLMIALIPVLIWICCQSQPLNMLALGETSARQLGLPLWFWRNLLVVATGWMVGVSVAMAGAIGFIGLVIPHILRLCGLTDHRVLLPGCALAGAIALLLADVVARLALASAELPIGVVTATLGAPVFIWLLLKSAR", - "output": "plasma membrane ; vitamin transmembrane transporter activity ; cobalamin transport" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MTKSPLTLYLAAPRGFCAGVDRAIKIVEMAIEKWGAPVYVRHEIVHNKFVVDGLRAKGAVFVEELDECPDDRPVIFSAHGVPKAIPAEAERRQMVYVDATCPLVSKVHIEAERHAEHGLQIIMIGHRGHPETIGTMGQLPEGEVLLVETVADVARIAVRDPARLAFVTQTTLSVDDTRDIVAALQARFPQIVGPHKEDICYATTNRQEAVKAVAPKSDALLVVGAPNSSNSRRLVEVAAKAGCSYAQLVQRADDIDWRALDGIATIAVSAGASAPELLVNEVIDAFRARFDVTVEVVETAVEHVEFKVPRVLRQPA", - "output": "4 iron, 4 sulfur cluster binding ; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity ; metal ion binding ; dimethylallyl diphosphate biosynthetic process ; isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway ; terpenoid biosynthetic process" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MFAKQIDIHWQKMKGIKFLHWLLGTVLLWVSLSTPALAIPALDYNPWEAIQLPTTATILDMSFIDRHHGWLVGVNATLMETRDGGQTWEPRTLVLDHSDYRFNSVSFQGNEGWIVGEPPIMLHTTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITNVGAIYRTKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHNRTTSRRLHNMGFTPDGRLWMIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGAGALLCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQGFILGQKGILLRYVTDLTAAPA", - "output": "photosystem II ; plasma membrane-derived thylakoid lumen ; photosynthesis" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MVKVYAPASSANMSVGFDVLGAAVTPVDGTLLGDVVSVEAADHFRLHNLGRFADKLPPEPRENIVYQCWERFCQALGKTIPVAMTLEKNMPIGSGLGSSACSVVAALVAMNEHCGKPLNDTRLLALMGELEGRISGSIHYDNVAPCFLGGMQLMIEENGIISQQVPGFDEWLWVLAYPGIKVSTAEARAILPAQYRRQDCIAHGRHLAGFIHACYSRQPQLAAALMKDVIAEPYRARLLPGFSQARQAVSEIGALASGISGSGPTLFALCDKPETAQRVADWLSKHYLQNQEGFVHICRLDTAGARVVG", - "output": "cytoplasm ; ATP binding ; homoserine kinase activity ; phosphorylation ; threonine biosynthetic process" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MPLFARLCQPQSRRMFSSISSFSALSVLRPQTGMLLNSSPLKTPSFTPLGFGLIGQRRWKSRGNTYQPSTLKRKRTFGFLARAKSKQGSKILKRRKLKGRWFLSH", - "output": "cytoplasm ; mitochondrial inner membrane ; mitochondrial large ribosomal subunit ; mitochondrion ; nucleus ; structural constituent of ribosome ; mitochondrial translation" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "KEGYLVNHSTGCKYECFKLGDNDYCLRECKQQYGKGAGGYCYAFGCWCNHLYEQAVVWPLPKKTCN", - "output": "extracellular region ; sodium channel inhibitor activity ; toxin activity ; defense response" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MENFDKVKDIIVDRLGVDADKVTEDASFKDDLGADSLDIAELVMELEDEFGTEIPDEEAEKINTVGDAVKYINSLEK", - "output": "cytoplasm ; acyl carrier activity" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MSGFVLAIDQGTTSTRAILFDGQMKVAGSGQKEFAQHYPASGWVEHDPEEIWASVVTTVKAALKNAGKAASDVAAIGITNQRETVVVWDRATGKPIHNAIVWQDRRTAPLCQKLKKQGLEKKFTRKTGLLLDPYFSGTKIAWILDKVKGGRKRAEKGELLAGTIDSFLIWRLTGGKVHATDATNASRTLVYNIAENAWDDELLAILNIPAKLLPQVKDCADDYGVTERDLFGAEIRILGVAGDQHAATIGQACFEPGMMKSTYGTGCFALLNTGSDLVRSKNRLLTTIAYRLNGKTTYALEGSIFIAGAAVQWLRDGIKVIGKAEQSGKLADEADPTQNVYLVPAFVGLGAPHWDAEARGAIFGLTRNSGPAEFARAALEAVAYQTRDLLDAMRKDWKGTSAKTVLRVDGGMVASDWTMQRLADILDAPVDRPTILETTALGAAWLAGSKAGVWPKAKEFAKSWALERRFKPEMDIATRSAKLAGWRDAVRRTLSA", - "output": "ATP binding ; glycerol kinase activity ; glycerol catabolic process ; glycerol metabolic process ; glycerol-3-phosphate metabolic process ; phosphorylation" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MITGKELRIISLLTLDTVFFLLEITIGYMSHSLALIADSFHMLNDIISLLVALWAVDVAKNRGPDAKYTYGWKRAEILGALINAVFLIALCFSIMIEALQRLIEPQEIQNPRLVLYVGVAGLISNVVGLFLFHDHGSDSLHSHSHGSVESGNNDLDIESNATHSHSHASLPNDNLAIDEDAISSPGPSGQIGEVLPQSVVNRLSNESQPLLNHDDHDHSHESKKPGHRSLNMHGVFLHVLGDALGNIGVIAAALFIWKTEYSWRYYSDPIVSLIITIIIFSSALPLSRRASRILLQATPSTISADQIQREILAVPGVIAVHDFHVWNLTESIYIASIHVQIDCAPDKFMSSAKLIRKIFHQHGIHSATVQPEFVSGDVNEDIRRRFSIIAGGSPSSSQEAFDSHGNTEHGRKKRSPTAYGATTASSNCIVDDAVNCNTSNCL", - "output": "fungal-type vacuole ; fungal-type vacuole membrane ; zinc ion transmembrane transporter activity ; intracellular zinc ion homeostasis ; response to cadmium ion ; zinc ion transmembrane transport" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MDYTLTRIDPNGENDRYPLQTQETVSGDPLEQHVHRSVYMGKLENAMHDMVNWGRKNSLWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADFMVVAGTCFTKMAPVIQRLYEQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFLPVDVYIPGCPPRPEAYMQALLLLQESIGKERRPLSWVVGDQGVYRANMQPERERKHAERIAVTNLRTPDEI", - "output": "plasma membrane ; 4 iron, 4 sulfur cluster binding ; iron ion binding ; NADH dehydrogenase (ubiquinone) activity ; quinone binding" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MDYLPLFHKLQGGRVLVVGGGEIALRKARLLADAGGVLRVVAPDVDGQLAALAREGGGEVLVRGYQAADLVGCRLVIAATDDPGLNAQVSADAQALSLPVNVVDAPALCTVIFPAIVDRSPLVIAVSSGGDAPVLARLIRAKLEAWIPSAYGELAGLAARFRHKVKSLYPDVNQRRGFWETVFQGPIAERQLAGQGAEAERLLQAMVDGAPVQQGGEVYLVGAGPGDPDLLTFRALRLMQQADVVLYDRLVAPAIIDMCRRDAERIYVGKRRADHSVPQDQINRLLVDLARQGKRVLRLKGGDPFIFGRGGEEIEELAEHGIPFQVVPGITAASGCSAYGGIPLTHRDYAQSVRFVTGHLKDGTSNLPWNDLVAPAQTLVFYMGLVGLPTICAELIRHGRAASTPAALVQQGTTRNQRVFTGTLADLPDLVAQHEVHAPTLVIVGEVVQLRDKLAWFEGSQNS", - "output": "NAD binding ; precorrin-2 dehydrogenase activity ; sirohydrochlorin ferrochelatase activity ; uroporphyrin-III C-methyltransferase activity ; cobalamin biosynthetic process ; methylation ; siroheme biosynthetic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MPDATGVIARNPFEEAPSRLNQYTPEEAAALQARLEKKLGPEYISSRPGAAGLKVHYLAADKCINLANEVFGFNGWSSSIQNIQIDFVDESPNTGKVSLGLSVIVRVTLKDGAYHEDLGYGHIENCKGKAAAFEKAKKEATTDALKRALRNFGNVLGNCIYDKDYISKVSKLKTVPSKLDVGDLHRHPDFAPIKKEPMRVKPSLEDDDLPPNPSIAGRNTSTNSAADMDAEFGSDVFDEADFNVGEGEYPDGIVAEDTQKRHQPPTPVGRPNAHLNLPKHALGAQASGNQHVVTPSKPERPMNLAPAGRQIPNQALNNRPFPPPAQNQYTNQRQSVPLPGSNGGLQNGRSIPLGQRASNGMATGSDAGAQVPIKQEHGAKQPNPAPQNTAVPATPGINGQGPPVVGFLSARGADMLRENPHSAATVAPAFNPHAESPSIRKTAGVDHTKSIPISKPMLAGSASPLSNQTRDFINPSAEMHRKIGAPSGSVVGGPMNRGPSVSSYRPLTRPNVDPKAAAQNNTAAANRMAPNMNGKRPPLNDVTNETLPGGNGCTPAPGLNDPKRAKYDESMSAQQHQQQHQH", - "output": "nucleus ; DNA binding ; DNA recombinase assembly ; double-strand break repair via homologous recombination ; double-strand break repair via single-strand annealing ; mitotic recombination" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVIKSNDVREPFNEDKLRSGMLRALEKRPVSADDVEMALNHIKSQLRATGEREVPSKMIGNLVMEQLKKLDKVAYIRFASVYRSFEDIKDFGEEIARLQD", - "output": "ATP binding ; DNA binding ; zinc ion binding ; negative regulation of DNA-templated transcription" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MSSSPVNVKKLKVSELKEELKKRRLSDKGLKADLMDRLQAALDNEAGGRPAMEPGNGSLDLGGDAAGRSGAGLEQEAAAGAEDDEEEEGIAALDGDQMELGEENGAAGAADAGAMEEEEAASEDENGDDQGFQEGEDELGDEEEGAGDENGHGEQQSQPPAAAQQASQQRGPGKEAAGKSSGPTSLFAVTVAPPGARQGQQQAGGDGKTEQKAGDKKRGVKRPREDHGRGYFEYIEENKYSRAKSPQPPVEEEDEHFDDTVVCLDTYNCDLHFKISRDRLSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVRHLYTKDIDIHEVRIGWSLTTSGMLLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVITCFANFETDEVELSYAKNGQDLGVAFKISKEVLADRPLFPHVLCHNCAVEFNFGQKEKPYFPIPEDCTFIQNVPLEDRVRGPKGPEEKKDCEVVMMIGLPGAGKTTWVTKHAAENPGKYNILGTNTIMDKMMVAGFKKQMADTGKLNTLLQRAPQCLGKFIEIAARKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEHAVLKMKGNFTLPEVAECFDEITYVELQKEEAQKLLEQYKEESKKALPPEKKQNTGSKKSNKNKSGKNQFNRGGGHRGRGGFNMRGGNFRGGAPGNRGGYNRRGNMPQRGGGGGSGGIGYPYPRGPVFPGRGGYSNRGNYNRGGMPNRGNYNQNFRGRGNNRGYKNQSQGYNQWQQGQFWGQKPWSQHYHQGYY", - "output": "catalytic step 2 spliceosome ; cell surface ; centrosome ; CRD-mediated mRNA stability complex ; cytoplasmic ribonucleoprotein granule ; cytosol ; dendrite ; dendrite cytoplasm ; inactive sex chromosome ; kinetochore ; midbody ; mitotic spindle ; mitotic spindle microtubule ; mitotic spindle midzone ; nuclear chromosome ; nuclear matrix ; nuclear speck ; nucleoplasm ; nucleus ; protein-containing complex ; ribonucleoprotein complex ; spindle pole ; telomerase holoenzyme complex ; actin binding ; ATP binding ; chromatin binding ; chromatin DNA binding ; DNA binding ; double-stranded DNA binding ; double-stranded RNA binding ; identical protein binding ; lncRNA binding ; mRNA 3'-UTR binding ; poly(A) binding ; poly(C) RNA binding ; poly(G) binding ; pre-mRNA binding ; promoter-specific chromatin binding ; protein-containing complex binding ; ribonucleoprotein complex binding ; RNA binding ; RNA polymerase II C-terminal domain binding ; RNA polymerase II cis-regulatory region sequence-specific DNA binding ; RNA polymerase II complex binding ; sequence-specific DNA binding ; sequence-specific double-stranded DNA binding ; single-stranded DNA binding ; single-stranded RNA binding ; snRNA binding ; telomerase RNA binding ; TFIIH-class transcription factor complex binding ; transcription corepressor activity ; adaptive thermogenesis ; cardiac muscle cell development ; cell cycle ; cell division ; cellular response to dexamethasone stimulus ; cellular response to glucocorticoid stimulus ; cellular response to leukemia inhibitory factor ; circadian regulation of gene expression ; CRD-mediated mRNA stabilization ; dendritic transport of messenger ribonucleoprotein complex ; dosage compensation by inactivation of X chromosome ; maintenance of protein location in nucleus ; mRNA metabolic process ; mRNA processing ; mRNA stabilization ; negative regulation of kinase activity ; negative regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay ; negative regulation of stem cell differentiation ; negative regulation of telomere maintenance via telomerase ; negative regulation of transcription by RNA polymerase II ; negative regulation of transcription elongation by RNA polymerase II ; positive regulation of attachment of mitotic spindle microtubules to kinetochore ; positive regulation of brown fat cell differentiation ; positive regulation of cytoplasmic translation ; positive regulation of DNA topoisomerase (ATP-hydrolyzing) activity ; positive regulation of gene expression ; positive regulation of stem cell proliferation ; positive regulation of transcription by RNA polymerase II ; protein localization to spindle microtubule ; regulation of alternative mRNA splicing, via spliceosome ; regulation of chromatin organization ; regulation of mitotic cell cycle ; regulation of mitotic spindle assembly ; RNA localization to chromatin ; RNA splicing" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MHRYRSHTCAALRKTDVGSNVRLSGWVHRVRDHGGILFIDLRDHYGITQIVADPDSPAFKVAETVRGEWVIRVDGEVKARADDAVNTNLPTGEVEIFATEIEVLSPAKELPLPVFGEPDYPEDIRLKYRFLDLRRETLHKNIMSRTKIIAAMRRRMTEIGFNEFSTPILTASSPEGARDFLVPSRIHPGKFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLEMSFVTQEEVWETMEPVMRGIFEEFAEGKPVTKVFRRIAYDDAIRTYGSDKPDLRNPIEMQAVTDHFAGSGFKVFANMIANDAKVEVWAIPAKTGGSRAFCDRMNSWAQSEGQPGLGYIFWRKEGDKLEGAGPIAKNIGEERTEAIRKQMGLEDGDACFFVAGLPSKFYKFAGDARTRAGEELNLVDRDRFELAWIIDFPFYEWDEDNKKIDFAHNPFSLPQGGMDALENMDPLEIKAYQYDLVCNGFEIASGSIRNQLPEVMVKAFEKVGLSQQDVEERFGGLYRAFQYGAPPHGGMAAGIDRVIMLLVGAKNLREISLFPMNQQALDLLMGAPSEVSPAQLRDLHVRLAPVQKS", - "output": "cytoplasm ; aspartate-tRNA ligase activity ; aspartate-tRNA(Asn) ligase activity ; ATP binding ; nucleic acid binding ; aspartyl-tRNA aminoacylation" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MLLFQKTLSRVAAPISVAANLILILLIIFKSPAQMGNYKYLLIGLSIFEMSYAVLDVVSETTVLSIKKSFVVVVPYKDRSFGQETAMDINLIYCGFFGFSMGMFVVIFAYRSFLTTGNTILRKFEGFKIISWFAYPLFYAIVWILVAWGPLASFPEMDIVVRPFLLDELNMTVDEVAYTGRLFYSTIDNSLRYSAILTGVLQWVLTASSLFLVIFFGLRCYFHYGKLVQLTDVQSIRLRQLQNQLFLALVCQATVPLILMHIPVTILYTCCVLNIVFNPFSVATTIALFPAIDPLPTIFIVKNYRVALFEFVCPSCLCWSETLKHMGSNRITSYRSNTVNALSM", - "output": "plasma membrane ; G protein-coupled olfactory receptor activity ; G protein-coupled receptor signaling pathway ; olfactory behavior ; response to insecticide" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MSFLTVPYKLPVSLSVGSCVIIKGTLIDSSINEPQLQVDFYTEMNEDSEIAFHLRVHLGRRVVMNSREFGIWMLEENLHYVPFEDGKPFDLRIYVCHNEYEVKVNGEYIYAFVHRIPPSYVKMIQVWRDVSLDSVLVNNGRR", - "output": "lactose binding ; apoptotic process ; positive regulation of T cell apoptotic process" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MGIFTLCSCGVPCPTRSFYRRHMASGCDLLPTRQQLADVGYTEPTVIAEVVTPPTQAPLELFVEISPPVLAPFEPSVEISLPIQAPAEPIVEASPPAATQFVGIEALIASGPCFFGSFGPFEEYYSSPVGPLTRFDTLRREGHCAARARVAAVAAKAVIVQQTLSETAAAMRATLPLWMKGQVAPPVKSKRALKREAKAKAKADYLASDEAYYKATDGLTALPPGVSRDVHMRQLDAMEVAYLAHVGDVAARGFQRRQVLRAAYKARCEKRAFKRFLEEVDFLCLPVHIVDKIQTPFDGEQAAAPEMQKGMVYATSRRQVKTRRSFSSFLPKEDFSFTLGVCPARSPTVTPSSTPSTSRSSSPEPRVSSPSGVLPEKAACIGFCSHGSECTEHFCFGYLNLKSEALASQYLAWLLQTKLPGGISCFELEVSSYLEQCQDTMEAIDLWWHAMDRYCFNFKSSKYVILDNFLCKHSIAKDQTPREFLAKHRIAKAKALHRVPSRKEKMQALCEQRADKAWDAYIELNKNCKVGEGPLEYLKAAKDRCVEFFSPFTKYCNEAIRSLNPLVAILGPFKDGFWTCFNNLREKCLKMVNDHWLAFAAGTTLVLSLIFLLCIICLVKIFSILIANLGLGVVAITTLVTALVVGFFLFNGMLEQAADLQLCSLVASDFLNFLAQNQGSALVAGTMASVQDDLRGQGVSWCFSALYKLISRVVPVGIKETSILFNSIGNVSRSANHSKDFFLNMKEMACSWMDALSDAMALISDDSVSAMQVLKHLCEHDFLDWAKKVERYAGETYDSLIISPAERLKILRILADQQESFQKAFYNPRIASKAPRLMLTEFNRLSTLLRDAHNALSRASLFDRQRTPPFWVHLYSENGGTGKSMAMMPLGNHMLDAIGEPKTCRFVTRNVASKFLNGYQHQPCFLMDEFGAAPKQDYSDEVTMLDLVSPNALTLNMAAIGEKNTMFTSKLIISTANRRLAHPDVKLGANLDGFLRRRNILAEVVLVSGKPHFHEFNLLAPRTEQKVYLNRAMQESQVPDPLTPQEFYSLCTENFVNFLNQQSSTVAMSAGLNYVRSSDFSHLKDFLLFKIGLDFEENEVERIVTDYGNSLKNETIFPPEHEQIFQKWKDALDSLTLPELVSLLDKSVSETFVYTLISENHPNVVMSSLTPYECMIYAICKKKYREGTEAKLPFPEGETTSYGASFLSFVAQVALCIPKWALFCVALCAVLLVGYLIIKFAIFLFSGVVTLLGALAFSNLSGDGAEDSPSFDTNRKRGGVKFEYSTKWDASSTNRFAESYSENGTIPAGTSWADFFGEGPEEEPSQSLLNLLKHQVVLIAEPTKVVYNCIALGGRNFLITKHVWDLMPACNYGLYGYAVAKDRIFISPRIRPCAQLKGRDLVIVQLPDSVPPFTSLPRDIFLENMAKAPKTANACLVVAKPLFERRSVAKLEQTIYPFKQLPQVHSKDTYSCGSLGSKQMPACYSYVFETYAGLCTSPLIAQEGGRCIILGLHVVGDRSKMGYAQIVTLDDFSDVALSDKVGQGPEEMYIPTKNSECFGSVTKLGAWTGPKPYFLEKTSLIPSLISTSIDVERTTEPAILSQRDKRLKDSINPEFDVFLEGMKKYAVEAHSLDEDLEVFEDALDRVFLEIPEHACEDLTNDQVCNGIEDDPYAEGIVMQTAEGFPFCTQRPAGASGKSWLFAGAPGDWHIVPGSLLANEMHKKEVAPSRGLFEPLIGIDFPKDEKVDSSKVYIKPKTRLFTILPVDYNILVRKYFLSSVSHIMTQHNTIPVKVGIDCLSNEWSILYHQLRSKGTNWFNGDYSRFDGITPRNVLQGIVKRINKFYNNKNSLAITDSNLSINSDLARSLLTDMASTRYGLTNGDLWYVTSGIPSGFPLTVIVNSLVNNFFIHFSYIKLMKREELNSLYPLHSFRQMVAYATYGDDNLVSVNDVITEKFNLVKIADLLAEHGVTLKNGADKNEEILSPFYPLEKVDFLKRKFVHYQGHVVAPLNPVNITERLHWIRKGLGEADATLENCSSAAFEALFHGRCYYDTLVAKIYKACAASKLSIQLPTYNDALAIFLSNDSFAKAIQTISLDLPKAIFVNKSNYFVSEIFPDVFFCSNERNVTLHKLLEITTTRNICYISRNYESRNSSRGLFSLKGEGWALAPVSARLVVYKNMQKPVYFVDEANDGLALAYCLDYMLRIKGVSRSRLAQVLYNIFGHDETLCSRIASNFSLLDSNKYMPPHKK", - "output": "host cell membrane ; membrane ; ATP binding ; cysteine-type endopeptidase activity ; RNA binding ; RNA helicase activity ; RNA-dependent RNA polymerase activity ; DNA-templated transcription ; proteolysis ; RNA-protein covalent cross-linking ; viral RNA genome replication" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MNIQNDKERLLNGSIDEIEIITTDNNENDTIRNDDILKNSQLREQQQHQQIQQQIQQQKKESSLSTIASVIAFYFFISISLVFLNKILLSDFKFEYPLFITWYQQIISFVSIYIMTSISKSVPALSFLPEFEFKSATASKVLPVTAVLTGMVIFNNLCLEYVEVSFYQVARSLTICFSLILTYIVLKSKTSYRATMACLVVFLGFVLGSAGEVNFSWLGIIFGLLSSFFVALYSIAVKRVLPAVDGNEWRLSIYNTAISIGLIFPLILVSGEANTILDEPLLYSGTFWFYMTVAGLMGYLISISVFMQIKHTSPLTNTISGTVKACVQTILAVVFWGNPISTQNAVGILLVIGGSFWYSMQRFFEMKK", - "output": "Golgi apparatus ; Golgi membrane ; antiporter activity ; GDP-fucose transmembrane transporter activity ; carbohydrate transport ; GDP-fucose import into Golgi lumen ; protein O-linked fucosylation" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MNQNIIYTVYGDLKLTLKNMRPDVLLHNPVMFLTEVSLFVSIFIYIFPSFFGVPYTGTYRSFYVAVVVLLFLTVFFSSISTALSEGKSKAITDSLKKFKTDVIAHVQKDGNIVDVRSNELKKNDIIIIYKDEIVPIDGEVIEGSGYVDESNVTGESRAVMKVIGDTVTGSTRLVTDKLKIRATADPGSTFIDKMIELVEKSTREKTPNEISLTVFLSGLTLIFLVITASIFAISHYFGRTANIVMLIVLLIALIPTTIGALLPAIGIAAINKVSEYNIIAKSGRAIENAGDIDTIILDKTGTITIGERKAVKFYPNKGISDVEFAKLAAMSSYYDQTKEGLSIFELAKKQGAEISKDDLKGYEFIPFSSETKFSGIQSPSDTVIKGSLKALKEKFQVADEFIEALCKEISMRGGTAIPVVHNGKFAGVIELQDLIKPGIKERISEIKNMDIKTVMCTGDDEVTAQYISAQAGIDEYIANSKPVDKYNVVIREKEGQRMVAMVGDGTNDAPALAKADVGLAMNNGTQAAKEAANMIDLDSNPTKLMDVIFLGKQILITRGSLTTFSIANDISKYFVIIPAIFYMFPSLSLVNILDLTDPIVAVTSALIFNTIIIVFLIPLALGGVHYKPTSISEMLKRNLMIYGIGGVITPFIAIKLIYMLLIAWGVTW", - "output": "plasma membrane ; ATP binding ; ATP hydrolysis activity ; magnesium ion binding ; P-type potassium transmembrane transporter activity" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MGGRVFLAFCVWLTLPGAETQDSRGCARWCPQNSSCVNATACRCNPGFSSFSEIITTPTETCDDINECATPSKVSCGKFSDCWNTEGSYDCVCSPGYEPVSGAKTFKNESENTCQDVDECQQNPRLCKSYGTCVNTLGSYTCQCLPGFKFIPEDPKVCTDVNECTSGQNPCHSSTHCLNNVGSYQCRCRPGWQPIPGSPNGPNNTVCEDVDECSSGQHQCDSSTVCFNTVGSYSCRCRPGWKPRHGIPNNQKDTVCEDMTFSTWTPPPGVHSQTLSRFFDKVQDLGRDSKTSSAEVTIQNVIKLVDELMEAPGDVEALAPPVRHLIATQLLSNLEDIMRILAKSLPKGPFTYISPSNTELTLMIQERGDKNVTMGQSSARMKLNWAVAAGAEDPGPAVAGILSIQNMTTLLANASLNLHSKKQAELEEIYESSIRGVQLRRLSAVNSIFLSHNNTKELNSPILFAFSHLESSDGEAGRDPPAKDVMPGPRQELLCAFWKSDSDRGGHWATEGCQVLGSKNGSTTCQCSHLSSFAILMAHYDVEDWKLTLITRVGLALSLFCLLLCILTFLLVRPIQGSRTTIHLHLCICLFVGSTIFLAGIENEGGQVGLRCRLVAGLLHYCFLAAFCWMSLEGLELYFLVVRVFQGQGLSTRWLCLIGYGVPLLIVGVSAAIYSKGYGRPRYCWLDFEQGFLWSFLGPVTFIILCNAVIFVTTVWKLTQKFSEINPDMKKLKKARALTITAIAQLFLLGCTWVFGLFIFDDRSLVLTYVFTILNCLQGAFLYLLHCLLNKKVREEYRKWACLVAGGSKYSEFTSTTSGTGHNQTRALRASESGI", - "output": "extracellular exosome ; focal adhesion ; membrane ; plasma membrane ; secretory granule membrane ; calcium ion binding ; G protein-coupled receptor activity ; transmembrane signaling receptor activity ; adenylate cyclase-activating G protein-coupled receptor signaling pathway ; cell adhesion ; cell surface receptor signaling pathway ; cell-cell signaling ; G protein-coupled receptor signaling pathway ; immune response ; inflammatory response" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MAWVSFYLLPFIFSTGLCALPVLTQPPSASALLGASIKLTCTLSSEHSTYTIEWYQQRPGRSPQYIMKVKSDGSHSKGDGIPDRFMGSSSGADRYLTFSNLQSDDEAEYHCGESHTIDGQVG", - "output": "extracellular space ; immunoglobulin complex ; plasma membrane ; adaptive immune response ; immune response" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MVQEYDVIVIGAGHAGVEAGLASARRGAKTLMLTINLDNIAFMPCNPSVGGPAKGIVVREIDALGGQMAKTIDKTHIQMRMLNTGKGPAVRALRAQADKVLYQQEMKRVIEDEENLHIMQGMVDELIIEDNEVKGVRTNIGTEYLSKAVIITTGTFLRGEIILGNMKYSSGPNHQLPSITLSDNLRELGFDIVRFKTGTPPRVNSKTIDYSKTEIQPGDDVGRAFSFETTEYILDQLPCWLTYTNAETHKVIDDNLHLSAMYSGMIKGTGPRYCPSIEDKFVRFNDKPRHQLFLEPEGRNTNEVYVQGLSTSLPEHVQRQMLETIPGLEKADMMRAGYAIEYDAIVPTQLWPTLETKMIKNLYTAGQINGTSGYEEAAGQGLMAGINAAGKVLNTGEKILSRSDAYIGVLIDDLVTKGTNEPYRLLTSRAEYRLLLRHDNADLRLTDMGYELGMISEERYARFNEKRQQIDAEIKRLSDIRIKPNEHTQAIIEQHGGSRLKDGILAIDLLRRPEMTYDIILEILEEEHQLNADVEEQVEIQTKYEGYINKSLQQVEKVKRMEEKKIPEDLDYSKIDSLATEAREKLSEVKPLNIAQASRISGVNPADISILLIYLEQGKLQRVSY", - "output": "cytoplasm ; flavin adenine dinucleotide binding ; tRNA wobble uridine modification" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MATISPGGAYIGTPSPFLGKKLKPFSLTSPILSFKPTVKLNSSCRAQLIDTVHNLFIGVGVGLPCTVMECGDMIYRSTLPKSNGLTITAPGVALALTALSYLWATPGVAPGFFDMFVLAFVERLFRPTFRKDDFVVGKKLGEGSFGVVYKVSLSKKRSNEEGEYVLKKATEYGAVEIWMNERVRRACGNSCADFVYGFLDKSSKKGPEYWLLWKYEGESTLAGLMQSKEFPYNVETIILGKVQDLPKGLERENKIIQTIMRQLLFALDGLHSTGIIHRDVKPQNIIFSEGSRSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVAAALSPVLWQMNLPDRFDIYSIGLIFLQMAFPSLRSDSNLIQFNRQLKRCDYDLTAWRKLVEPRASADLRRGFELVDLDGGIGWELLTSMVRYKARQRISAKAALAHPYFDRQGLLALSVMQNLRMQYFRATQQDYSEAANWVIQLMAKNGTEKDGGFTETQLQELREKEPRKKANAQRNALASALRLQRKLVKTVTETIDEISDGRKTVWWNRWIPREE", - "output": "chloroplast ; chloroplast thylakoid membrane ; thylakoid membrane ; ATP binding ; protein kinase activity ; protein serine kinase activity ; protein serine/threonine kinase activity ; circadian rhythm ; photosynthetic acclimation ; protein phosphorylation ; regulation of photosynthesis, light reaction" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MYFIDEAINEIKAGNGGNGVVSFRKEKYVPLGGPDGGNGGKGGSIFFIGEQSENNLLKLKYQKHLKAKNGENGKNKNKHGANAENIYIKVPLGTIIYNLQNEITGEILKHGEILTIAKGGRGGKGNKSLATFKNPVPKYAEKGGIGESFKIKTELKILADVGLIGYPSVGKSTLISIISDAKPKIADYPFTTLKPYLGMVYVDNESFIVADLPGLIPNAHLGKGMGIKFLKHIERCRILIHMCDMSKSNPLQDIENLNQELKIYNKNLLKKPQIIIANKMDIIGAKTKLIELQKKILNKNIIPTSLLKNQNLKILKYKMLEMIKKNVVNLPLCENSSFKTYTLEEEKPDFVIKKDNQGFFVVKGEKIEKFFYKTDFNNEEATKKFAIFLKKIGVEEELIKKGVYFSKNKIKICDRVFEFIT", - "output": "cytoplasm ; GTP binding ; GTPase activity ; magnesium ion binding ; ribosome biogenesis" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MSNVTHQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPRYDDADMVIVNTCGFIDSAVQESLEAIGEALNENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLQHVHHYVPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGDVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGVWTRLHYVYPYPHVDDVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGAGANELPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIVDEVDEEGAIGRSMADAPEIDGAVYLNGETNVKPGDIVRVKVENADEYDLWGSRV", - "output": "cytoplasm ; 4 iron, 4 sulfur cluster binding ; metal ion binding ; protein methylthiotransferase activity ; peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid ; tRNA modification" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "METIAKHRHARSSAQKVRLVADLIRGKKVSQALDILTYTNKKAAVQVKKVLESAIANAEHNDGADIDDLKVTKIFVDEGPSMKRIMPRAKGRADRILKRTSHITVVVSDR", - "output": "large ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MMCISKLPAVLLILSVALNHLRATPVRSGSNPQMDKRKCNTATCATQRLANFLVRSSNNLGPVLPPTNVGSNTYGKRNAAGDPNRESLDFLLV", - "output": "cytosol ; extracellular space ; inclusion body ; hormone activity ; identical protein binding ; lipid binding ; adenylate cyclase-activating G protein-coupled receptor signaling pathway ; amylin receptor signaling pathway ; amyloid fibril formation ; bone resorption ; eating behavior ; negative regulation of bone resorption ; negative regulation of cell population proliferation ; negative regulation of osteoclast differentiation ; osteoclast differentiation ; positive regulation of calcium ion import across plasma membrane ; positive regulation of cell death ; positive regulation of ERK1 and ERK2 cascade ; positive regulation of gene expression ; positive regulation of peptidyl-serine phosphorylation ; positive regulation of protein kinase A signaling ; positive regulation of protein kinase B signaling ; protein destabilization ; protein homooligomerization ; sensory perception of pain" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MAAEGRVQRVASEFQKVISLLLRTRIKDAKLASATITEVDLSKDLSYAKIYYTCLAIEDAEYIDKAFEKSKGFFRSSIAKSLSLRIVPNLKFIYDTSLDYGMQMEEKIQQALEADSKIIKQDDKSLQENYKQNDKETKAEKLR", - "output": "cytoplasm ; maturation of SSU-rRNA" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MDLLNTTFLSIGLAIDAFAVSLSSGFIIKHIKFNKALKIALFFGIFQGVMPLIGWLTGLTFRDALANFDHWIAFILLAAIGGKMIYEACQDEEENKKFNPLDNYTLFALAIATSIDALAAGLGLSVLRVSILLACTLIASITFSLSFIGVFIGHKFGSIFNQKLEILGGITLIGIGTKILVEGLIIH", - "output": "plasma membrane ; manganese ion transmembrane transporter activity" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MENLPNHEENDDVGYHQSPGPIDPNDHSASETPVYSTMSTDSFAYHRTCSETSGGGFSDQIDETSSFCTEASPSDWPVLTESNNSASSNFPTVFDLKHNQIETDEHLAVQEISEPELETMKERFSKLLLGEDMSGSGKGVCTAVTISNAITNLYATVFGQNLRLEPLEIEQKTTWKREMNCLLSVCDYIFEFIPKSQNLSNGATVEVMESRPRADIYINLPALRKLDSMLMEALDSFQKTEFWYAEEGSLSMKSTRSATGSFRKVIVQRKEEKWWLPIPLVPLQGLSEKARKQLKSKRESTNQIHKAAMAINSSILGEMDIPDSYMATLPKSGKASTGDAIYRHMTSSGRFSPEKLLDRLKIVSEHEALQLADRVEASMYTWRRKACLNNSKSSWNMVKDLMSITERSDKNYVLAERAESLLFCLKQRYPELSQTSLDICKIHCNKDVGKAVLESYSRVLEGLAFNIVAWIDDVLYVDKTMRGEE", - "output": "plasma membrane ; guanyl-nucleotide exchange factor activity" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MSQNSNPAVVLEKVGDIAIEQRPIPTIKDPHYVKLAIKATGICGSDIHYYRSGGIGKYILKAPMVLGHESSGQVVEVGDAVTRVKVGDRVAIEPGVPSRYSDETKEGSYNLCPHMAFAATPPIDGTLVKYYLSPEDFLVKLPEGVSYEEGACVEPLSVGVHSNKLAGVRFGTKVVVFGAGPVGLLTGAVARAFGATDVIFVDVFDNKLQRAKDFGATNTFNSSQFSTDKAQDLADGVQKLLGGNHADVVFECSGADVCIDAAVKTTKVGGTMVQVGMGKNYTNFPIAEVSGKEMKLIGCFRYSFGDYRDAVNLVATGKVNVKPLITHKFKFEDAAKAYDYNIAHGGEVVKTIIFGPE", - "output": "D-xylulose reductase activity ; L-iditol 2-dehydrogenase activity ; zinc ion binding ; hexose metabolic process ; sorbitol catabolic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MMKKIDVKILDPRVGQQFPLPTYATSGSAGLDLRACLDDAVELAPGATTLVPTGLAIHIADPSLAAVMLPRSGLGHKHGIVLGNLVGLIDSDYQGQLMVSIWNRGQDSFTIEPGERIAQMVFVPVVQAEFNLVEAFDATERGEGGFGHSGRK", - "output": "dUTP diphosphatase activity ; magnesium ion binding ; dUMP biosynthetic process ; dUTP catabolic process" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MKSLLDLFKQFTPDEHFDAIKIGMASPEKIRSWSFGEVKKPETINYRTFKPERDGLFCAKIFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIDLAAPCAHIWFLKSLPSRLGLVLDMTLRDIERVLYFEAYVVTDPGMTPLKKFGIMSEDDYDAKRKEYGDEFVAKMGAEGIKELLEGIDIEIEIEKLRGDLTGSEVKVKKNAKRLKVLEAFKKSGIKPEWMILEVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNSRLRRLLELKAPEIIARNEKRMLQEAVDSLLDNGRRGKAMTGANKRALKSLADMIKGKSGRFRQNLLGKRVDYSGRSVITVGPTLKLHQCGLPKLMALELFKPFIFSRLEAMGIATTIKAAKKEVEAGTPVVWDILEEVIKEHPVMLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSVEAQLEARTLMLASNNVLFPASGEPSIVPSQDVVLGLYHATREKINGKGEGLVFADTGEVQRALDAGEAELHAKISVRLTEWTKDKATGEFVPETKLVDTTVGRALLSEILPKGLPFSNLNKALKKKEISKLINASFRKCGLKDTVVFADKLLQNGFRLATHAGFSVAIDDMLVPPQKAEILARAEAEVKEIEQQYVSGLVTAGERYNKVVDIWGKAGDDVSKVMMDQLKVQKTIDRNGKEVNEESFNAIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGARKGLADTALKTANSGYLTRRLVDVTQDLVVTEDDCGTSNGSLMRAIVEGGEVIESLRDRILGRTAAEEVLHPETRAVLAQPGRMLDEDLIEELEAAGVDEVKVRTALTCETRYGLCAKCYGRDLGRGGLINLGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAVASSVEAKSNGIIGFNATMRYVTNTKGELVVIARSGEIIIQDEHGRERERHKVPYGATLTVKADQNIKAGTILANWDPLTRPIITEYAGTVKFENVEEGLTVAKQVDEVTGLSTLVVIDPKRRGSAKVVRPQVKLVDADGKEVKIPGTDHSVTIGFQVGALIQVRDGQEVGPGEVLARIPMEGQKTRDITGGLPRVAELFEARSPKDKGMLAEMTGTISFGKETKGKVRLQITDPDGKVWDELVPKEKNVLVHEGQVVNKGELIVDGPADPQDILRLLGIEELSRYIVDEVQDVYRLQGVKINDKHIEVIVRQMLRRVVVENPGESTYIAGEQVERSEILNTNEALQAEGKLPATYSNVLLGITKASLSTDSFISAASFQETTRVLTEAAIMGKRDELRGLKENVIVGRLIPAGTGLAYHQARKAKDAMDEAERRAIADAEAAELASAGTHDAAAEIDGSADTAD", - "output": "DNA-directed RNA polymerase complex ; DNA binding ; DNA-directed 5'-3' RNA polymerase activity ; magnesium ion binding ; zinc ion binding ; DNA-templated transcription" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MIRLEQVIEILKKDNNFREISSAGEYYFNWPKEVNFDQLSYDSRKSTENTLFFAKGLNFKKEYLTDLEAAFYVSEFDYEVALPAIIVTDVKRAMALIAASFYDFPQNKLKTLALTGTKGKTTSAYFAKAILDKMNGGKTALLSTAQTTLDGKNYFKSELTTPESLDLLEMMAKALTNGMTHLVMEVSSQAYKTERVYGLTFDVGVFLNISPDHIGPVEHPTLEDYFYCKRQLLKNSRYFVANSEMNHFAIIKEELKERKIPHAFYGADSENKIIESKGLHFVTDGSVSGAFDIRLLGRFNQENALATALATKALGASLENIHDGLALAVVPGRMELLTAKNGAHIYIDYAHNGLSLENLVEVVEEHHAGQLVLVLGSTGNKGESRRKDFGQVIEKHPRLDVILTTDDSNREDPKIIADEIASFVSRTLDFELDRELAIKKAVSKTKSTDDAVIIAGKGTDMFQLKDGKRQPYIGDTAAAQKYL", - "output": "cytoplasm ; acid-amino acid ligase activity ; ATP binding ; magnesium ion binding ; cell cycle ; cell division ; cell wall organization ; peptidoglycan biosynthetic process ; regulation of cell shape" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "LGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPIPEIEKPIFEMVWTAQTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNIDKALVEAFQPLNISDYNSIFWIAHPGGPAILDQVEQKLGLKPEKMKATREVLSEYGNMSSACVLFILDEMRKKSAQQGLKTTGEGLDWGVLFGFGPGLTIETVVLHSVAL", - "output": "chalcone synthase activity ; naringenin-chalcone synthase activity ; flavonoid biosynthetic process" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MSKMSEEEEFLLFKNISLVGPWDGPQYHLAPVWAFHLQAVFMGFVFFVGTPLNATVLVATLRYRKLRQPLNYILVNVSLGGFIYCIFSVFIVFITSCYGYFVFGRHVCALEAFLGCTAGLVTGWSLAFLAFERYIIICKPFGNFRFSSKHALMVVVATWTIGIGVSIPPFFGWSRFVPEGLQCSCGPDWYTVGTKYYSEYYTWFLFIFCYIVPLSLICFSYSQLLGALRAVAAQQQESASTQKAEREVSHMVVVMVGSFCLCYTPYAALAMYIVNNRNHGVDLRLVTIPAFFSKSACVYNPIIYCFMNKQFRACIMEMVCGKPMTDESELSSSQKTEVSTVSSSQVGPN", - "output": "cone photoreceptor outer segment ; cytosol ; intercellular bridge ; nucleoplasm ; perinuclear region of cytoplasm ; photoreceptor inner segment ; photoreceptor outer segment ; plasma membrane ; G protein-coupled receptor activity ; photoreceptor activity ; cellular response to UV-A ; G protein-coupled receptor signaling pathway ; phototransduction ; visual perception" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MLPRIANQRAIVDRRALADAVSAAFAEQGDRSRPAVVELLRGALDSGRAELARRLEARPSAGTECAHGQAFLVDQLVRVIHDHVVGKVYRASNRSTGERIAIIAVGGYGRGEMAPHSDVDIAFVTPIKPTSWCEQVIEAILYFLWDLGLKVGHSSRSLDEVVRMAKSDLTIRTALLEGRYVWGDRDLFDAASARFWNEVVNGTEKQFVAEKLQERNERHKRLGDSRYVVEPNVKEGKGGLRDLHTLYWIGKYIHKVRDASELVDVGLLTAEEYRAFRRAENFFWAVRCHLHAITRRAEDRLTFDLQREVAMRMNFADRPGKSAVERFMQYFFLQAKQVGSLTGVFLAQLDGQFARQKRSFFASLRSRRKKVGPFFIEGGKLGVPAEDTFQQDPVRLVELFAVAASEKVEIHPEAMRLARRDAGLIDAAVRKDQRANALFLDVLTSRNDPETVLRWMNEAGVFGRFVPDFGRVVAQMQFDMYHHYTVDEHTIRAIGLLASIEKGEAKADHPLASEVVGKVASRRVLYVATLLHDIAKGRRGDHSVLGAEVAMKLCPRLGLSAAETELVAWLVRWHLLMSATAFKRDLADYKTIADFVNTVQSQERLRLLLLLTIVDIRAVGPGVWNSWKRQLLGDLFVSAEEVLRLGHKQHGRAERIIAKKKAVGAILKERDNLIGTVGRQLGDAYWIAEPEDIIALNLQQMDQALGELLSVEAHWYPARGATLVTVLAADHPGLFYRIAGGIHLAGGNIIDARIHTARNGTAVDNFLVQDPLGRPLNEASQIERLKNAIADALANRVKLVPQLAARPLARPRADAFDVRPIVIFDNKASNRFTVIEVGARDRPALLNRLARALFEARLIVHSAHIATYGERAVDTFYVTDVLGEKVDSEARMKAVEKRLLEAAEDRKVKDAA", - "output": "uridylyltransferase activity ; phosphoric diester hydrolase activity ; nitrogen compound metabolic process ; regulation of nitrogen utilization" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MSTTAYPDTILIIDFGSQVTQLIARRVREANVYCEIVPFQSADEAFKRLQPKGVILSGSPHSTTDIGSPRAPQAIFDAGIPVLGICYGEQTMCAQLGGNVESGHDREFGRAFLDVQEDSPLFAGIWAKGTRHQVWMSHGDRVTSLPDGFTIIGTSPNAPYAVIADEKRKYYGVQFHPEVVHTPDGAKLLQNFVHRIVGVKPGWTMGAYREQAVEAIRKQVGSGKVICALSGGVDSSVAALLAHEAVGDQLTCILVDHGLMRKDEAQQVVEMFREHYNLPLILVDASDRFIGALEGESDPEKKRKTIGRLFIEVFEEEARKLGGADFLVQGTLYPDVIESVSFTGGPSVTIKSHHNVGGLPERMKMQLVEPLRELFKDEVRLLGKELGLPDSFIGRHPFPGPGLAIRCPGGVTRGKLEILREADAIYLDEIRKAGLYDAIWQAFAVLLPVQTVGVMGDGRTYEFVCALRAVTSVDGMTADFYHYDMNFLGNAATRIINEVRGINRVVYDVTSKPPGTIEWE", - "output": "ATP binding ; GMP synthase activity ; glutamine metabolic process" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MLTRKQHELLMFIHERIKETGVSPSFDEMKEALDLASKSGIHRLITALEERGFLRRLPHRARALEVVRLPQQATAAAPPKGRAPFKPQLVEAGQAMPVAANDTRELPILGKIAAGTPIEAIQQERDRLPVPEAMLGAGEHFVLEIQGDSMINAGILDGDFVVIRRTDSANSGDIVVALVDGEEATLKRLRKKGASIALEAANPAYETRIFGPDRVAVQGRLVGLIRRYH", - "output": "DNA binding ; serine-type endopeptidase activity ; DNA repair ; DNA replication ; negative regulation of DNA-templated transcription ; proteolysis ; SOS response" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MSEELSKKHTTRLNKLQKRLRREVGSAIADYNMIEDGDRVMCCLSGGKDSYAMLDILMNLQQRAPIQFEIIAVNLDQKQPGFPEDILPAYLDKLKVPYHILEKDTYSIVKDKIPEGKTTCSLCSRLRRGTLYGFAQRIGATKIALGHHRDDIIETLFLNMFFGGKMKAMPPKLLSDDGANIVIRPLAYCREKDLEEYAQLKQFPIIPCNLCGSQENLKRAAVKDMLNQWDRQYPGRIETIFTAMQNTAPSQGVDREQFDFISLKRDPDVPMTGDVAEADLPAFDFLDIANSGHIDLDAAQRIDVVSFYEA", - "output": "cytoplasm ; 4 iron, 4 sulfur cluster binding ; ATP binding ; magnesium ion binding ; sulfurtransferase activity ; tRNA binding ; tRNA thio-modification" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MPVIYINLIAAFFMAFMGLLIYRSHLMSSLLCLEGMMLSLFILNSTLALSMHFTLYSMMPIILLVFAACEAALGLSLLVMVSNTYGLDYVQNLNLLQC", - "output": "mitochondrial inner membrane ; mitochondrial respiratory chain complex I ; NADH dehydrogenase (ubiquinone) activity ; ATP synthesis coupled electron transport" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MTTSLALYLALGCGLAAVLYGFIQRGWILAQDAGNARMQEIAGAIQQGAAAYLARQYKTIAIVGAVLAILIFFFLGGLTAAGFVLGAVLSGACGFIGMNVSVRANVRTAQAATKGIGPALDVAFKGGAITGMLVVGLGLLGVSLFFWFLSGGIHADPATLKPLLGLAFGSSLISIFARLGGGIFTKGADVGADLVGKVEASIPEDDPRNPAVIADNVGDNVGDCAGMAADLFETYAVTLIAAMALGALLLPNAALAAAVYPLVLGGVSIIASIIGCAFVKASPGMKNVMPALYKGLIVAGAISLVFFFFVTRMVMPDDALGAGTQMRLFGACVVGLVLTAAMVWVTEYYTGTQFKPVQHVAQASTTGHGTNIIAGLGVSMKSTAWPVIFVCLAIYGAYALAGLYGIAIAATSMLSMAGIVVARDAYGPITDNAGGIAEMSGLPDSVRDITDPLDAVGNTTKAVTKGYAIGSAGLAALVLFADYTHALEARGMSLSFDLSDHRVIVGLFIGGLIPYLFASMAMEAVGRAAGSVVVEVRRQFRDIKGIMEGTAKPEYGTAVDMLTTAAIKEMIVPSLLPVVAPILVGMLLGPAALGGLLMGTIVTGIFVGISMCTGGGAWDNAKKLIEEGFTDANGVLHKKGSEAHKAAVTGDTVGDPYKDTAGPAVNPLIKIINIVALLIVPLLPLASNPVKASHAEPAPMVQPAETAPAMPAAPMAEPSAPAASQ", - "output": "plasma membrane ; inorganic diphosphate phosphatase activity ; magnesium ion binding ; pyrophosphate hydrolysis-driven proton transmembrane transporter activity" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MSYPQAPSKFVNPDEIIPLSPPTKPPFAQYAASPLPATPHTPYSPPSPSRLSETIPLRPYLSLLPRILLTFFSPCLLPMILTIAHLIQNRSSTASLATSLKSSVLSACSGLAKAAASIKTLPRYLAMQTNQEAIRATQASILAIGTMLMDAITIIEAVVNFIVDTYRSLLLCTIELAVRGTLEILISAVQTISDAVTDTLNSVRSNIQDDIGDANDIIQTAVSAINRVTTLVNLNISVPEFSIPALSFLQNVTIPTTFEDGLITLNSSLPTLTDLKKKMDEIIDTPFEALISEINSTRLEMAASFNSSILSVPSLSSLSANSANDLSNDLCSDLDTSLIDDTAKALHKLSSIAIGLMFLLLFLIWAALAVWEWRKWKLMKDTVDAVNEEWDRDGKSDAWRMVAIVEHPVLERYSGTFLGKIAKMPRTRTNLRWFLSYLAHPTCLALLFISLFGFLSIQFQLVALNALKAHAQSSANSTVTASTNSLVTKLNAAALNSSQEYADSYNEAIAGYQDRINNELFGSWVNTTAVTLNSTLVEFYDEVEKALNASFGGTILYNPINTFMYCILGSKITNLEKGLTWISEHAFVDLPTFPSDILLLSNDSMNEIATPIAAAAVGSGDGGDDDDGVVGTLISHFESALKVERTFYGIMLGVWLALFLIGLAVVIWNSGGREKFMALRGVPSSSSPPGYGPPESKHPRWKAWLTNNHPIYDSYAEKQFRGTTPTNCLESYTHADVPNVNNGNDDHEKSFFKMRDSHAAGPFGSHATSAVRSTIASLAAPGQSFLKLSGRKLTDTTTPYDDKVPLAPVQTSEKYSRDHANSPFPRPSSESSESSAAQPFWVDKFYGAFEGVKSFFPTRSQRLGAALARKASQRTEGSFGASQVPTARTPGHDWIGGHQCLPEKKAEPEWSMVDPRMLGRALEDDKGRYPRVLPPSEMAAANYNPHPVYPRPMSRASTLGEGMVIPSTTSHPDPFQDMPPLPPKHKRASMDYVEEYESSHSRSSREDSRHGGVTSPASSSVSYFAAEPQLVSASKVQVGVAQKGGQATRALAEIVKELQEKRERKDPFGDDYERGL", - "output": "mating projection tip ; plasma membrane ; plasma membrane fusion involved in cytogamy" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MEPFRIHKGTAAVLMNDNIDTDQIIPKQYLKRIERTGFGKYLFDEWRYDNERHENPNFPLNAPDRKGASILITGDNFGCGSSREHAPWALADYGFRVIIAGGFADIFYMNCMKNGMLPIVMDKEMREKLAKTDAREQIEVNLENEVITTSTHRFHFTIEKMWKEKLLNGLDEISITMQYEQEIKEYERMVAVY", - "output": "3-isopropylmalate dehydratase complex ; 3-isopropylmalate dehydratase activity ; leucine biosynthetic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MLYLTKIRNAESEFTENEQKIADFLRANVSELKSVSSRKMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGEYSASREKTNATAQHLHSSITSDDSLEVIARKLNREKELALEQTCALFDYARLQKIIEVISKAPFIQITGLGGSALVGCDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLADSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK", - "output": "carbohydrate derivative binding ; DNA binding ; DNA-binding transcription factor activity ; carbohydrate derivative metabolic process ; carbohydrate metabolic process ; N-acetylmuramic acid catabolic process ; negative regulation of DNA-templated transcription ; regulation of carbohydrate catabolic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MARDKFERSKPHVNIGTIGHVDHGKTTLTAAISATLSQYTGKSKKFDEIDSAPEERARGITINTAHVEYETDKWYYAHVDCPGHADYVKNMITGAAQMDGAILVCSAANGPMPQTREHILLAKQVGVPYIVVFLNKADMVDDEELLELVQLEVQELLEKYDFPGSEIPFVAGSALLALEAVANNPTIKRGEDKWVDTIYQLMDKVDEYIPTPERETDKAFLMAVEDVFSITGRGTVATGRIERGKVKVGDTIEIVGLRETRNTTITGLEMFQKSLDEALAGDNVGILVRGIQKTDIERGMVLAAPGSITPHTKFEGEVYVLTKEEGGRHTPFFSGYRPQFYVRTTDVTGTIAQFTSDDGSTAEMVMPGDRIKMTAQLIHPIAIEKGMRFAIREGGRTVGAGVVSKIIE", - "output": "chloroplast ; GTP binding ; GTPase activity ; translation elongation factor activity" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MEAQNIFLYLLIVFLSLHFVFTTLKGRLSPANTRRLIRLLHIPIKSPVAAAIFARKDTREFLDSSIKLVNEEDDFGFSFDFKPYMISKAETINRALDEAIPLIEPLNIHKAMRYAILAGGKRVRPILCLAACELVGGEERLAIQAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVFGESVAILSGGALLALAFEHLTEADVSSKKMVRAVKELAKSIGTKGLVAGQAKDLSSEGLEQNDVGLEDLEYIHVHKTGSLLEASAVIGAVIGGGTEKEIEKVRNFARCIGLLFQVVDDILDETKSSEELGKTAGKDKVAGKLTYPKVIGVEKSKEFVEKLKRDAREHLQGFDSDKVKPLIALTNFIANRNH", - "output": "endoplasmic reticulum ; dimethylallyltranstransferase activity ; farnesyltranstransferase activity ; geranyltranstransferase activity ; metal ion binding ; carotenoid biosynthetic process ; farnesyl diphosphate biosynthetic process ; geranyl diphosphate biosynthetic process ; geranylgeranyl diphosphate biosynthetic process ; isoprenoid biosynthetic process" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MAAPSPSGGGGSGGGGGTPGPIGPPASGHPAVSSMQGKRKALKLNFANPPVKSTARFTLNPNTTGVQNPHIERLRTHSIESSGKLKISPEQHWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMYEERTVEVACYVCKILDQMPATPSSPMYVD", - "output": "axon ; cytosol ; dendrite cytoplasm ; nucleus ; perikaryon ; ATP binding ; JUN kinase kinase activity ; MAP kinase kinase activity ; molecular adaptor activity ; protein serine kinase activity ; protein serine/threonine kinase activity ; protein tyrosine kinase activity ; apoptotic process ; cell growth involved in cardiac muscle cell development ; cellular response to mechanical stimulus ; cellular response to sorbitol ; JNK cascade ; MAPK cascade ; negative regulation of motor neuron apoptotic process ; positive regulation of apoptotic process ; positive regulation of DNA replication ; positive regulation of JNK cascade ; positive regulation of neuron apoptotic process ; positive regulation of nitric-oxide synthase biosynthetic process ; positive regulation of protein phosphorylation ; positive regulation of smooth muscle cell apoptotic process ; protein phosphorylation ; response to wounding" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MNKRFNSEDKIILAIDGLDLSQAKLLLEKCPHVKWVKVGLELFVREGPRVIEILKGLNKKIFLDLKFHDIPNTMSAACFQVSKLGVDIISIHASAGLKALKDSKKASLEGATSVSVKPPFVVGITVLTSFSLKDFQTDLDRNNSIEENVLRLAKLSFDAGLDGCVCSPWEVKMLRSNYKNNFELITPGIRLNIDSKDDQNRIMTPHEAIDNGASKLVIGRSISKAIDPNMALIEIFKSIDSD", - "output": "orotidine-5'-phosphate decarboxylase activity ; 'de novo' pyrimidine nucleobase biosynthetic process ; 'de novo' UMP biosynthetic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MKSSVEQLNPTRVRINVEVPFTELEPDFQRAYKELARHVQLPGFRPGKVPARLLEARFGRETLLDQVVNEAMPSRYGQALAESEVQPIGQPEIEVIRKEYGQDLAFTVEVEVRPKIALPDFSTLKVVVDPVEVSTDDVEAELRSLRARFGTLIGVDRPVALGDFVSIDLSATINGEKVPNADAEGLSHEVGYGRLIAGLDDALVGLSAGESRVFTTQLATSKHAGQDAEVIVTVKSVKERELPEPDDEFAQLVSEFDTMAELRANLGDQVRKAKYAQQAEKIRDAAVDALLERVDVPLPEGIVQAQFNNALHDALSGLGHDEAKFAEVLAERGSSREEFEAEARSAAERDVTRQLLLDVVADDQKIQVGQDDLNERLLATSQQYGVDAQQLFGFLRENNRLSSLVTDARRRLAVAAVVEAATFTDSDGNTIDTSEFFGKHAQSDKADQKTEEADPNSDAIDEEVDEAAE", - "output": "cytoplasm ; peptidyl-prolyl cis-trans isomerase activity ; cell cycle ; cell division ; protein folding ; protein transport" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MFNTYTNSLQWPIRSRNQQDYCSLLPERSESYKLSKAYTSSRCYCVSSRSSCCCCCSTPSSSSFVKPKVLINPGFVLYGVRQSTLIQWPSFQRRLLVGGGRLMGCEVYSSCDGIRRKNRSFKLRCLEESDECCGGRSCSDDVEAMISFLSEELIDEERKWNLVSRVKEKKKVGNVRKVSVEGSNSYGNGRVSQRVKKPEGFGRRKEIKEDVKLNERYDCEHCGRRKKSSELESESRRGSKLVTGEYIGKSYRGDEEREVRPRRRKSSSCSSYYSLASSGEFESDTEDQEEDVEIYRENVRSSEKKVVDQSAKRLKSRKEASQMHSRKKRDESSTGVDSRYQKQIFEEGENSNQAVTLNQRRRKKFSQTENRVSESTGNYEEDMEIHEVHVNDAETSSQNQKLFNEREDYRVHSIRNDSGNENIESSQHQLKERLETRYSSEDRVSEMRRRTKYSSSQEEGINVLQNFPEVTNNQQPLVEERISKQAGTRRTTEHISESSEIHDIDIRNTYVSQREDQIRNQEVHAGLVSGLQSERKQQDYHIEHNPLQTTQSDRTSVSVSHTSDAVRYTEIQRKSEKRLIGQGSTTAVQSDSKVEKNGAQKEDSRLDHANSKKDGQTTLGLQSYQSKLSEEASSSQSSLMASRTKLQLVDLVSEEMQGSETTLIPPSSQLVSRRSGQSYRTGGVSIQEISHGTSESGYTTAFEHPRAGASVNSQSAGELMGFTSHEDAMGSAHRLEQASEKYVGEFVKKAKHGVINPETEEQRAESNQLKRRDSRRSSGGSGAKGPSDEMWVTDSAQGTPHPGATEGNAAVGNAIFKRNGRSLWNVIADIARLRWGSRAGSPDSSAKPAGRSSPNESVSSATWFSGREHDGSSDDNTKGDKVLPQEAPSLHQVEVGQTSPRSQSEYPGTTKLKQRSERHEGVVSSPSSTILEGGSVSNRMSSTSGNQIVGVDEEEGGNFEFRLPETALTEVPMKLPSRNLIRSPPIKESSESSLTEASSDQNFTVGEGRRYPRMDAGQNPLLFPGRNLRSPAVMEPPVPRPRMVSGSSSLREQVEQQQPLSAKSQEETGSVSADSALIQRKLQRNKQVVRDSFEEWEEAYKVEAERRTVDEIFMREALVEAKKAADTWEVPVGAVLVHDGKIIARGYNLVEELRDSTAHAEMICIREGSKALRSWRLADTTLYVTLEPCPMCAGAILQARVNTLVWGAPNKLLGADGSWIRLFPGGEGNGSEASEKPPPPVHPFHPKMTIRRGVLESECAQTMQQFFQLRRKKKDKNSDPPTPTDHHHHHLPKLLNKMHQVLPFFCL", - "output": "chloroplast ; metal ion binding ; tRNA-specific adenosine deaminase activity ; tRNA wobble adenosine to inosine editing" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MAMTAEVKDELSRLVVNSVSARRAEVASLLRFAGGLHIVSGRVVVEAEVDLGIIARRLRKDIYDLYGYNAVVHMLSASGIRKGTRYVVRVAKDGEALARQTGLLDLRGRPVRGLPAQVVGGSVADAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVSAKAREVRGSDRVVVRDGEAIGALLTRMGAQDTRLTWEERRMRREVRATANRLANFDDANLRRSARAAVAAAARVERALEILGDTVPDHLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSMADRKAKQDGIPDTESAVTPDLLEDA", - "output": "DNA binding ; cell cycle ; cell division ; regulation of sporulation" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MVLEYQQREGKGSSSKSMPPDSSSTTIHTCSEAQTGEDKGLLDPHLSVLELLSKTGHSPSPMGQNLVTSIDISGNHNVNDSISGSWQAIQPLDLGASFIPERCSSQTTNGSILSSSDTSEEEQELLQAPAADIINIIKQGQEGANVVSPSHPFKQLQKIISLPLPGKEKTPFNEQDDDGDEDEAFEEDSVTITKSLTSSTNSFVMPKLSLTQKNPVFRLLILGRTGSSFYQSIPKEYQSLFELPKYHDSATFPQYTGIVIIFQELREMVSLLNRIVQYSQGKPVIPICQPGQVIQVKNVLKSFLRNKLVKLLFPPVVVTNKRDLKKMFQRLQDLSLEYGEDVNEEDNDDEAIHTKSRSYCRNKKAENSKKKSPKSNKKPKRKKQKFFTSWFTWGISITIGISFGCCVTYFVTAAYEHQTVKSLSLRPSILASLLSLDSSSDTINTPATASPSSTEQFLWFDKGTLQINFHSDGFIMKSLTIIKETWGKMNTFVLHALSKPLKFLENLNKSSEFSIDESNRILALGYILL", - "output": "mitochondrial outer membrane ; phagophore assembly site membrane ; vacuolar membrane ; autophagy" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MKIIIFRVLTFFFVIFSVNVVAKEFTLDFSTAKTYVDSLNVIRSAIGTPLQTISSGGTSLLMIDSGTGDNLFAVDVRGIDPEEGRFNNLRLIVERNNLYVTGFVNRTNNVFYRFADFSHVTFPGTTAVTLSGDSSYTTLQRVAGISRTGMQINRHSLTTSYLDLMSHSGTSLTQSVARAMLRFVTVTAEALRFRQIQRGFRTTLDDLSGRSYVMTAEDVDLTLNWGRLSSVLPDYHGQDSVRVGRISFGSINAILGSVALILNCHHHASRVARMASDEFPSMCPADGRVRGITHNKILWDSSTLGAILMRRTISS", - "output": "rRNA N-glycosylase activity ; toxin activity ; negative regulation of translation" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MSEMATIARPYAKAAFDFAVEKGELSQWAQMLTFCSEVAKNEDVAQLLDGAIASEQLAEIFISICGEQLNEFGQNFINVMAENGRLKVLPGVLEQFILLQHEFEKVIDADVTSAIELTEQQKADIGAKLEARLERKVKLNCSVDETLLAGVIIRAGDLVIDNSARGRLGRLSETLQS", - "output": "plasma membrane ; proton-transporting ATP synthase complex, catalytic core F(1) ; proton-transporting ATP synthase activity, rotational mechanism" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MAVPASDGSTASEWVTTGSVTVRVPGKVNLYLSVGDLRDDGYHDLTTVFHAVSLLDEVTVRNADVLSLRMIGEGAESLPADERNLAWRAAELMAEHVGRAPDVEITIEKSIPVAGGMAGGSADAAGVLVAMNTLWELGVPRRDLHALAAQLGSDVPFALHGGTALGSGRGEDLATVLARNTFHWVLAFAHRGLSTPKVFGELDRLRADTTRGLPRTDEPEPVLAALASGDPAELAALLGNDLQPAALSLYPDLRRTLRAGVEAGALAGIVSGSGPTCAFLCASAPAALDVGTQLSGAGVCRTVRVASGPVHGAHVVPAPSAS", - "output": "4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity ; ATP binding ; isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway ; phosphorylation ; terpenoid biosynthetic process" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MKKKHRIKKNDEFQTVFQKGKSTANRQFVVYQLDKEEQPNFRIGLSVSKKIGNAVVRNRIKRMIRQSITELKDEIDSGKDFVIIARKPCAEMTYEELKKSLIHVFKRSGMKRIKK", - "output": "ribonuclease P activity ; tRNA binding ; tRNA 5'-leader removal" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MIGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANRVTKPEAGHFAKAGVEAGRGLWEFRLAEGEEFTVGQSISVELFADVKKVDVTGTSKGKGFAGTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVRVDAERNLLLVKGAVPGATGSDLIVKPAVKA", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MAKCGSCGPGYKTPLDAMKGPREEILYLPCIYRNTGINKPDYLATVDVNPKSPKYSQVIHRLPMPNTNDELHHSGWNTCSSCYGDASKVRNKLILPCLISSRIYVVDVGTDPRAPRIHKTVEPYEVFWKCGLANLHTSHCLGCGEIMISSIGDPYGNGKGGFVLLDGETFEVKGNWEAEGEAAPFGYDFWYQPRHNVMISTEWGAPKAFALGFKMEEVQAGMYGHSLNVWDWTEHRRIQTIDLGEDGLIPLEIRFLHDPDAAQGLVGCALSSTVFRFYKEKDGKWAAEKVIKVPSKKVEGWALPEMPGLITDILISLDDRFLYFSNWLHGDIRQYDITDPRNPKLVGQIFLGGSILRGGPVTVLEDKDLECQPDPVIVKGKKVPGGPQMIQLSLDGKRLYVTNSLYSKWDKQFYPDMIKEGSVMLQIDVDTEKGGLKLNPNFLVDFGKEPGGPVLAHELRYPGGDCSSDIWV", - "output": "cytosol ; membrane ; nucleus ; methanethiol oxidase activity ; selenium binding ; protein transport" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MSVKVAINGFGRIGRNVLRAIIESGRTDIEVVAINDLGPVETNAHLFRFDSVHGRFPGEVKVAGDTIDVGRGPIKVTAVRNPAELPHKELGVDIALECTGIFTSRDKAAAHLAAGAKRVLVSAPADGADLTVVYGVNHEKLTNEHLVVSNASCTTNCLAPVAKVLNDAVGIEKGFMTTIHAYTGDQPTLDTMHKDLYRARAAAMSMIPTSTGAAKAVGLVLPELAGKLDGTSIRVPTPNVSVIDLKFVAKRATSKEEINEAIIAAASQQLKGILGFTDQPNVSIDFNHNPNSSTFHLDQTKVMEGTLVRVLSWYDNEWGFSNRMSDTAVAMGKLG", - "output": "cytoplasm ; glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity ; NAD binding ; NADP binding ; glucose metabolic process ; glycolytic process" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MAKVGMRERELKREKTVAKYAEKRAALKAIIANPNVSDEERWEAQMKLQKLPRDASPSRLRNRCQVTGRPHAVLRKFRLSRIKLREAAMRGDVPGLKKASW", - "output": "cytoplasm ; ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MTHYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPKYWGGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGISGEVTFDYGIAYDRSRKVAEGRVAGVHFLMKKNKITEIHGYGTFADANTLLVDLNDGGTESVTFDNAIIATGSSTRLVPGTSLSANVVTYEEQILSRELPKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALPNEDADVSKEIEKQFKKLGVTILTATKVESIADGGSQVTVTVTKDGVAQELKAEKVLQAIGFAPNVEGYGLDKAGVALTDRKAIGVDDYMRTNVGHIYAIGDVNGLLQLAHVAEAQGVVAAETIAGAETLTLGDHRMLPRATFCQPNVASFGLTEQQARNEGYDVVVAKFPFTANAKAHGVGDPSGFVKLVADAKHGELLGGHLVGHDVAELLPELTLAQRWDLTASELARNVHTHPTMSEALQECFHGLVGHMINF", - "output": "cytoplasm ; antioxidant activity ; dihydrolipoyl dehydrogenase activity ; flavin adenine dinucleotide binding ; glycolytic process ; tricarboxylic acid cycle" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MADHALNLDDFLSRFQLLRPQPSRHALNQRQAAVLVPIVRRPQPGLLLTQRSPLLRKHAGQVAFPGGAVDNTDATLIAAALREAQEEVAIPPEAVEVIGVLPPVDSVTGFQVTPVVGIIPPNLHYHASQDEVSAVFEMPLAEALRLGRYHPLDIHRRGNDHRVWLSWYQHYFVWGMTAGIIRELALQIGARP", - "output": "CoA pyrophosphatase activity ; magnesium ion binding ; manganese ion binding ; nucleoside diphosphate metabolic process" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MSHNTFGHLFRVTTWGESHGPALGCVVDGAPPRLPLKAEDIQQWLDRRKPGQSRFTTQRREPDAVKILSGTFVEDGIEMTTGTPISLMIENVDQRSKDYGDIVEKFRPGHADLTYFLKYGIRDYRGGGRSSARETAARVAAGAVARAMLPEMMIRGALVQMGPHKIDRANWDWNEVGNNPFWCPDAKAAAEWEIYLDSVRKAGSSCGAVIEIVASGVPAGLGSPIYGKLDAELASALMSINAVKGVEIGDGFGAAALSGEENADEMQSGPHGIEFSSNHAGGVLGGISTGQDVVARFAVKPTSSILSPRKTVTKGGDDTEIVTKGRHDPCVGIRAVPVGEAMMACVLADQLLRHRAQMGGSGRNE", - "output": "chorismate synthase activity ; amino acid biosynthetic process ; aromatic amino acid family biosynthetic process ; chorismate biosynthetic process" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MSSCGACTCGAAAARLLTTSLTSAQRGISCGRIHVPVLGRLGTTLDAQALRRAPLRTFSETPAYFASKDGANKDGSGDGNKKSVTEGSSKKSGSGNSGKGGNQLRCPKCGDLCTHVETFVSSTRFVKCEKCHHFFVVLSEADSKKSIIKEPESAAEAVKLAFQQKPPPPPKKIYNYLDKYVVGQSFAKKVLSVAVYNHYKRIYNNIPANLRQQAEAEKQTSLTPRELEIRRREDEYRFTKLLQIAGISPHGNALGASMQQQVNQQMPQEKRGGEVLDSSQDDIKLEKSNILLLGPTGSGKTLLAQTLAKCLDVPFAICDCTTLTQAGYVGEDIESVIAKLLQDANYNVEKAQQGIVFLDEVDKIGSVPGIHQLRDVGGEGVQQGLLKLLEGTIVNVPEKNSRKLRGETVQVDTTNVLFVASGAFNGLDRIISRRKNEKYLGFGTPSNLGKGRRAAAAADLANRSGESNTHQDIEEKDRLLRHVEARDLIEFGMIPEFVGRLPVVVPLHSLDEKTLVQILTEPRNAVIPQYQALFSMDKCELNVTEDALKAIARLALERKTGARGLRSIMEKLLLEPMFEVPNSDIVCVEVDKEVVEGKKEPGYIRAPSKESSEEEYDSGVEEDGWPRQADAANS", - "output": "cytosol ; endopeptidase Clp complex ; mitochondrial endopeptidase Clp complex ; mitochondrial inner membrane ; mitochondrial matrix ; mitochondrial nucleoid ; mitochondrion ; nucleoplasm ; ATP binding ; ATP hydrolysis activity ; ATP-dependent peptidase activity ; ATP-dependent protein folding chaperone ; peptidase activator activity ; protein dimerization activity ; unfolded protein binding ; zinc ion binding ; ATP metabolic process ; proteolysis ; proteolysis involved in protein catabolic process" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MSQQYEKKVERTEVVYGGDRRVEGSASASAEKTTNYTHTEIRAPMVNPLPPIISTGAAGLAQEIVGEGFTASATRISGAAATTQVLESQASREQAFKDQEKYSREQAAIARAHDKDLEKKTEEYRKTAEAEAEKIRKELEKQHARDVEFRKDLVESAIDRQKREVDLEAKYAKKELEHERELAMNALEQSKMATNVQVQMDTAAGTTVSGGTTVSEHTEVHDGKEKKSLGEKIKSLF", - "output": "cytoplasm" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MAAPRGRPKKDLTMEDLTAKISQLTVENRELRKALGSTADPRDRPLTATEKEAQLTATVGALSAAAAKKIEARVRTIFSKVVTQKQVDDALKGLSLRIDVCMSDGGTAKPPPGANNRRRRGASTTRAGVDD", - "output": "host cell cytoplasm ; viral tegument ; double-stranded DNA binding ; suppression by virus of host innate immune response" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MGFQKFSPFLALSILVLLQAGSLHAAPFRSALESSPADPATLSEDEARLLLAALVQDYVQMKASELEQEQEREGSRIIAQKRACDTATCVTHRLAGLLSRSGGVVKNNFVPTNVGSKAFGRRRRDLQA", - "output": "cytoplasm ; extracellular region ; extracellular space ; hormone activity ; protein-containing complex binding ; signaling receptor binding ; activation of adenylate cyclase activity ; adenylate cyclase-activating G protein-coupled receptor signaling pathway ; amylin receptor signaling pathway ; antibacterial humoral response ; antifungal humoral response ; antimicrobial humoral immune response mediated by antimicrobial peptide ; calcitonin gene-related peptide receptor signaling pathway ; cell-cell signaling ; defense response to Gram-negative bacterium ; defense response to Gram-positive bacterium ; endothelial cell migration ; endothelial cell proliferation ; G protein-coupled receptor internalization ; innate immune response ; leukocyte cell-cell adhesion ; negative regulation of blood pressure ; negative regulation of bone resorption ; negative regulation of calcium ion transport into cytosol ; negative regulation of osteoclast differentiation ; nervous system process involved in regulation of systemic arterial blood pressure ; positive regulation of cytosolic calcium ion concentration involved in phospholipase C-activating G protein-coupled signaling pathway ; positive regulation of interleukin-1 alpha production ; positive regulation of interleukin-8 production ; positive regulation of macrophage differentiation ; protein phosphorylation ; receptor internalization ; regulation of blood pressure ; regulation of cytosolic calcium ion concentration ; response to yeast ; vasculature development ; vasodilation" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MCEPGFARRREEVTGLNRITEKGLKDICKRDKLYQTPRLNDVLYLHFQGYQCIENLDEYTELKSLWLESNAISEIQNLTKLTKLKCLYLQNNLITKMENLEFNRELDTLNLSQNHIRKIENIGTDILPVLNTLNITSNYLTDSASLAALVECKTLSVLDLSNNRIDDILIVKIFEQMPSLKVLVLQGNPVVSRLPQYRKTLILACKELTYLDSRPVFPRDRACAEAWKREGYEGERKEVQRWNRAERRKTRESVNSTIRMRNRHLKPENQVPLLTSSDSEEEQKGISSAEKAQKRAEMEYGSVDTMWDEVSGESQASEHSTTSSTSAEDNESAGSQADHIAERISNRRVKPLEGRPKVLYDEAASGDVDSIVKLVTNKEENEQKDQNISEIEEQHKGKIVFIEEMNENQNASMGNQKAVSEAVETIGKPVAVDVNNTLSNSIVEPVNEQNNLASDQMEHLKGKRILIEKVDDIDPIKKELKYFDEAMQNKELKQTSELEELRDFTENLSSDVQEQAKDPSESDEEPTEEEMEVKSQLLKEQFQDRKQRLKEAIEERKTMQKNLEARKEDLNKSYNLFAKIMDDATDNVPKRVFGAGCDMPSKDWDKEECMQQLPLTSMEDSINGRPSSNDEDILTRPLTELTSAEAAEEICSQLDRKLAGEEAALRQLLCDLENENEILYSIETQIKYAESISVEDSQSQMVCASLLNDLISDVIYKDITEMGPNSYPLGPIESDEEYTYSEEPKLEKMVPPHLENPAGGKSLRECVDTFKEFFASKGNDKPRQESHTHLEKIRAAKALLKSKSLAEFSKDTPESLDAQLAKDEDRRKRHVAASAGRCFAKREKYDDTLEVVDNRLMVVKKDTGELEELPPPPELISDSESEKEVEEDDDAYDTAEETLQEYPRVPWTTPYKPKPRKAAEHLVNEAMQRILAEQFSELPDDTKENEPQEDEFFSLEAKETFGNLDSEFFQKLDLDKVTTANNAEAATECMRSYNELKACMKSGSTELQLTSEENEMLQEMLSSNEDLEAKHKSNDDPLVERDNELLNKMMQRMKEHEERARELQEQLEKEKEEENSGPIKLSMGEGSMLYQRWSPLSLTEIIDPQAEEGGRQAEEGGAQQEEGGAQSEERDDQAEGVPQAEEGVTQGEESVLQEEETHAENGVAQAEGRVLQSPEIYPIIGYEDIDDDDAASDFTTDYSSDDEVAVVVPPKISPAMLKAYYYDGFEEDMRMVRENEARTRRGLRAIMQKEKQMWKDNEEMAADMAPSPSPKEEHIPEVKTETETAKPTVETAKDKWAKIASRLNEFLDPEAMEQLESHEFGESDGEDDVDLTGLQNYDEESETECESALKETAEIGDSEKQENKTQDETLDPKDTEAITDVTLGIQRLKRQKLICQWEKIIPEDSKIGDGPTEKFLDQKAQDNPETTDERPENPKNFITLDYFVDTEPSESLEDTEATETPEVSTEQTLKTEQMEFNLDVLNDDGDVVIKEVTVEAQVTYQ", - "output": "axoneme ; synapse ; dynein complex binding ; chemical synaptic transmission ; cilium assembly" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MVQKTSMSRGPYPPSQEIPMEVFDPSPQGKYSKRKGRFKRSDGSTSSDTTSNSFVRQGSAESYTSRPSDSDVSLEEDREALRKEAERQALAQLEKAKTKPVAFAVRTNVGYNPSPGDEVPVEGVAITFEPKDFLHIKEKYNNDWWIGRLVKEGCEVGFIPSPVKLDSLRLLQEQKLRQSRLSSSKSGDNSSSSLGDVVTGTRRPTPPASGNEMTNLAFELEPLDLEEDEAELGEQSGSAKTSVSSVTTPPPHGTRIPFFKKTEHVPPYDVVPSMRPIILVGPSLKGYEVTDMMQKALFDFLKHLFDGRISITRVTADISLAKRSVLNNPSKHIIIERSNTRSSLAEVQSEIERIFELARTLQLVALDADTINHPAQLSKTSLAPIIVYIKITSPKVLQRLIKSRGKSQSKHLNVQIAASEKLAQCPPEMFDIILDENQLEDACEHLAEYLEAYWKATHPPSSTPPNPLLNRTMATAALAASPAPVSNLQVQVLTSLRRNLSFWGGLETSQRGGGAVPQQQEHAM", - "output": "L-type voltage-gated calcium channel complex ; T-tubule ; voltage-gated calcium channel activity ; calcium ion transmembrane transport ; positive regulation of muscle contraction ; regulation of monoatomic ion transmembrane transport" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MKHPYPFGGQFMPEILMAPVQDLSNSWKSLQNHSDFKNELDSVLKNYAGRPTPLTEIKNFAKAIHGPRIFLKREDLLHTGAHKINNALGQCLLAKHLGKTRIIAETGAGQHGVATATACGCLGLECVIYMGAKDIERQKPNVDKMNLLGAEVISVNQGAQTLKDAVNEALRDWSKNYESTHYCLGSALGPSPYPEMVRNFQSVISLEVKSQLQEIGFSPDLLIACVGGGSNAIGFFHHFIPDTRVKLVGVEAGGLGIESGHHAARFATGRPGVLHGFYSYLLQDNEGQVLPTHSISAGLDYPAVGPDHAVLYESGRASYTVATDKAALEAFFLLSRLEGIIPALESSHALAELINIAPTLPKESVVVVNLSGRGDKDLEQITNLIKAGNNE", - "output": "tryptophan synthase activity" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MSKDEELLQNYCSILFTYKTIGISNLHLYYFRETEIKSLKQLINAEFAILQTCNRVEIYLYSDTNTLKEVNKIIQYLNNIHNEPIGNQARVLCGKDAAKHLFLVASGADSLSIGEYEILSQIRSTIDMFKKLGFSGKYLQIFFERAIKVGRKVREETSISKGKVGIYSLAIDEAKKRFNDFYDRRILVIGAGEMAQKITSMLHNEGAKDVTIMNRTIEKAKQLALKFGYNYEKLDLDKLGNFDVAFISIYHENLRLENKWNTLIVDITVPPLFTGNNVITLEELERISNLNFKAREEELAKINKLVEDGINELLYDYKKEIYTEFMSKIMKRIETIRENEILRAYKELEKLGINDQQAKEILDLMTRSIIKKSFQPLFDNIRSLIFNGENSINYINFLIDIFKDGNISGFETEKIKEKQVSERSSI", - "output": "glutamyl-tRNA reductase activity ; NADP binding ; protoporphyrinogen IX biosynthetic process from glutamate" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MNHSPQSARPVSIMRRFLDSEAAGGITLMAAAALALIVANSPFAQTYFDALHLYIGPLSLAHWINDALMAKFFLLVGLEIKREMLDGQLASWPNRMLPGIAAAGGVILPAIIFAVLNHDNPAKLRGWAVPSATDIAFALGVLSLLGSRAPSSLKVFLATLAILDDLAAVVIIAIFYTAEISMPYLGAAFITAAVLFVMNRMGVVKLLPYLISAVILWFFVFNSGVHATVAGVVAALMIPLKPAPGRPDDMTSPLHKLEHTLAKPVAFIVVPIFGFANAGISFKGLEASVLGDTLTLGILLGLFLGKQFGVFGAAWLAIKTGLAEKPMGASWVQLYGVAILCGIGFTMSIFIGLLSFPSDLMQTETKIGVLSGSALSAICGYLLLRAAARPKRG", - "output": "plasma membrane ; antiporter activity ; sodium ion transmembrane transporter activity ; regulation of pH" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MAKTNISPGMQQYLDIKKDYPDAFLLFRMGDFYELFYEDAVKAAQLLEIGLTSRNKNAENPIPMAGVPHHSAQQYIDVLIELGYKVAVAEQMEDPKQAVGVVKREVVQVITPGTVVDSAKPDSANNFLVAVDFDGCRYGLAYMDVSTGEFCVTDLADFTSVRSEIQNLKAKEVLLGFDLSEEEQTILVKQMNLLLSYEETVYEDKSLIDGQLTTVELTAAGKLLQYVHKTQMRELSHLQALVHYEIKDYLQMSYATKSSLDLVENARTNKKHGSLYWLLDETKTAMGMRLLRSWIDRPLVSKEAILERQEIIQVFLNAFIERTDLSNSLKGVYDIERLSSRVSFGKANPKDLLQLGHTLAQVPYIKAILESFDSPCVDKLVNDIDSLPELEYLIRTAIDPDAPATISEGSIIRTGFDERLDHYRKVMREGTGWIADIEAKERQASGINNLKIDYNKKDGYYFHVTNSNLSLVPEHFFRKATLKNSERYGTAELAKIEGQMLEAREESSSLEYDIFMCIRAQVETYINRLQKLAKILATVDVLQSLAVVAETNHYIRPQFNDNHVITIQEGRHAVVEKVMGVQEYIPNSISFDQQTSIQLITGPNMSGKSTYMRQLALTVIMAQMGSFVAADHVDLPLFDAIFTRIGAADDLISGQSTFMVEMMEANQAIKRASDNSLILFDELGRGTATYDGMALAQAIIEYIHDRVGAKTIFATHYHELTDLSTKLTSLVNVHVATLEKDGDVTFLHKIAEGPADKSYGIHVAKIAGLPKSLLKRADEVLTRLETQSRSTEIISVPSQVESSSAVRQGQLSLFGDEEKAHEIRQALEAIDVMNMTPLQAMTTLYELKKLL", - "output": "ATP binding ; ATP-dependent DNA damage sensor activity ; damaged DNA binding ; mismatched DNA binding ; mismatch repair" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MPRGSRSAASRPASRPAAPSAHPPAHPPPSAAAPAPAPSGQPGLMAQMATTAAGVAVGSAVGHVMGSALTGAFSGGSSEPSQPAVQQAPTPAAPQPLQMGPCAYEIRQFLDCSTTQSDLSLCEGFSEALKQCKYYHGLSSLP", - "output": "MICOS complex ; mitochondrial intermembrane space ; mitochondrion ; nucleus ; maintenance of protein location in nucleus ; maintenance of synapse structure ; mitochondria-nucleus signaling pathway ; mitochondrial nucleoid organization ; mitochondrion organization ; oxidative phosphorylation ; positive regulation of cristae formation ; positive regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway ; positive regulation of mitochondrial transcription ; protein-containing complex assembly ; stabilization of membrane potential" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MDNIQTFIKESDDFKSIINGLHEGLKEQLLAGLSGSARSVFTSALANETNKPIFLITHNLYQAQKVTDDLTSLLEDRSVLLYPVNELISSEIAVASPELRAQRLDVINRLTNGEAPIVVAPVAAIRRMLPPVEVWKSSQMLIQVGHDIEPDQLASRLVEVGYERSDMVSAPGEFSIRGGIIDIYPLTSENPVRIELFDTEVDSIRSFNSDDQRSIETLTSINIGPAKELIIRPEEKARAMEKIDSGLAASLKKLKADKQKEILHANISHDKERLSEGQTDQELVKYLSYFYEKPASLLDYTPDNTLLILDEVSRIHEMEEQLQKEEAEFITNLLEEGKILHDIRLSFSFQKIVAEQKRPLLYYSLFLRHVHHTSPQNIVNVSGRQMQSFHGQMNVLAGEMERFKKSNFTVVFLGANKERTQKLSSVLADYDIEAAMTDSKKALVQGQVYIMEGELQSGFELPLMKLAVITEEELFKNRVKKKPRKQKLTNAERIKSYSELQIGDYVVHINHGIGKYLGIETLEINGIHKDYLNIHYQGSDKLYVPVEQIDQVQKYVGSEGKEPKLYKLGGSEWKRVKKKVETSVQDIADDLIKLYAEREASKGYAFSPDHEMQREFESAFPYQETEDQLRSIHEIKKDMERERPMDRLLCGDVGYGKTEVAIRAAFKAIGDGKQVALLVPTTILAQQHYETIKERFQDYPINIGLLSRFRTRKEANETIKGLKNGTVDIVIGTHRLLSKDVVYKDLGLLIIDEEQRFGVTHKEKIKQIKANVDVLTLTATPIPRTLHMSMLGVRDLSVIETPPENRFPVQTYVVEYNGALVREAIERELARGGQVYFLYNRVEDIERKADEISMLVPDAKVAYAHGKMTENELETVMLSFLEGESDVLVSTTIIETGVDIPNVNTLIVFDADKMGLSQLYQLRGRVGRSNRVAYAYFTYRRDKVLTEVAEKRLQAIKEFTELGSGFKIAMRDLTIRGAGNLLGAQQHGFIDSVGFDLYSQMLKEAIEERKGDTAKTEQFETEIDVELDAYIPETYIQDGKQKIDMYKRFRSVATIEEKNELQDEMIDRFGNYPKEVEYLFTVAEMKVYARQERVELIKQDKDAVRLTISEEASAEIDGQKLFELGNQYGRQIGLGMEGKKLKISIQTKGRSADEWLDTVLGMLKGLKDVKKQTISST", - "output": "cytoplasm ; excinuclease repair complex ; ATP binding ; ATP hydrolysis activity ; damaged DNA binding ; DNA binding ; DNA translocase activity ; helicase activity ; RNA polymerase core enzyme binding ; regulation of DNA-templated transcription ; transcription-coupled nucleotide-excision repair, DNA damage recognition" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MTLRLLEDWCRGMDMNPRKALLVAGIPPTCGVADIEEALQAGLAPLGEHRLLGRMFRRDENKNVALIGLTVETGSALVPKEIPAKGGVWRVIFKPPDTDSDFLCRLNEFLKGEGMTMGELTRVLGNRNDPLGLDPGIMIPEIRAPMLAQALNEALKPTLQYLRYKKLSVFSGRDPPGPGEEEFESWMFHTSQVMKTWQVSDVEKRRRLIESLRGPAFEIIRVLKINNPFITVAECLKTLETIFGIIDNPRALQVKYLTTYQKTDEKLSAYVLRLEPLLQKLVQKGAIEKEVVNQARLDQVIAGAVHKSVRRELGLPEGSPAPGLLQLLTLIKDKEAEEEEVLLQAELEGYCT", - "output": "cytoplasm ; cytosol ; mitochondrial outer membrane ; mitochondrion ; nucleus ; ubiquitin protein ligase binding ; apoptotic process ; apoptotic signaling pathway ; autophagy ; extrinsic apoptotic signaling pathway in absence of ligand ; extrinsic apoptotic signaling pathway via death domain receptors ; intrinsic apoptotic signaling pathway in response to DNA damage ; positive regulation of apoptotic process ; positive regulation of autophagosome assembly ; positive regulation of release of cytochrome c from mitochondria ; protein insertion into mitochondrial membrane involved in apoptotic signaling pathway ; regulation of apoptotic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MNQDQLKQMVGEAARDEVLKLPAGQVLGVGTGSTANYFIDALALHKGHFAGTVSSSNATTERLLKHGFKVLDPNDVQGLPAYVDGADEIDPAGHMIKGGGGVLTGEKIIASMAKQFICICDSSKQVPVLGNFALPVEIIPLSQGVVSRELEKFGGRVTLRLAKHTRADLNQTPSEPFVTDNGGWILDVAGLRIASPAQMEAQINQIAGVITVGLFAKEKANILLVSNAAGVERIQF", - "output": "ribose-5-phosphate isomerase activity ; pentose-phosphate shunt, non-oxidative branch" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MELQFLGTGAGQPAKHRNVSSLVLKLLDEINEVWMFDCGEGTQRQILETTIKPRKIKKIFITHLHGDHIFGLPGFLSSRAFQASEEQTDLEIYGPVGIKSYVTNSIRISGSKLPYQIHYHEFDDTSMGKILETDKFIVYAERLAHTIFCMGYRVVQKDLEGTLDAEALRAVGVPFGPLFGKVKNGQDIELEDGTKIFAKDFISEPRKGKIITIIGDTRKTSASVRLAKDADVLVHESTYGKGDERMARNHGHSTNMQAAQIARDAGAKRLLLNHVSARFLGRDCRQMEKDAATIFENVKVVRDLEEVII", - "output": "3'-tRNA processing endoribonuclease activity ; zinc ion binding" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MKLSSACAIALLAAQAAGASIKHRINGFTLTEHSDPAKRELLQKYVTWDDKSLFINGERIMIFSGEFHPFRLPVKELQLDIFQKVKALGFNCVSFYVDWALVEGKPGEYRADGIFDLEPFFDAASEAGIYLLARPGPYINAESSGGGFPGWLQRVNGTLRSSDKAYLDATDNYVSHVAATIAKYQITNGGPIILYQPENEYTSGCSGVEFPDPVYMQYVEDQARNAGVVIPLINNDASASGNNAPGTGKGAVDIYGHDSYPLGFDCANPTVWPSGDLPTNFRTLHLEQSPTTPYAIVEFQGGSYDPWGGPGFAACSELLNNEFERVFYKNDFSFQIAIMNLYMIFGGTNWGNLGYPNGYTSYDYGSAVTESRNITREKYSELKLLGNFAKVSPGYLTASPGNLTTSGYADTTDLTVTPLLGNSTGSFFVVRHSDYSSEESTSYKLRLPTSAGSVTIPQLGGTLTLNGRDSKIHVTDHNVSGTNIIYSTAEVFTWKKFADGKVLVLYGGAGEHHELAISTKSNVTVIEGSESGISSKQTSSSVVVGWDVSTTRRIIQVGDLKILLLDRNSAYNYWVPQLATDGTSPGFSTPEKVASSIIVKAGYLVRTAYLKGSGLYLTADFNATTSVEVIGVPSTAKNLFINGDKTSHTVDKNGIWSATVDYNAPDISLPSLKDLDWKYVDTLPEIQSSYDDSLWPAADLKQTKNTLRSLTTPTSLYSSDYGFHTGYLLYRGHFTATGNESTFAIDTQGGSAFGSSVWLNGTYLGSWTGLYANSDYNATYNLPQLQAGKTYVITVVIDNMGLEENWTVGEDLMKSPRGISTSCLPDGQAAPISWKLTGNLGGEDYEDKVRGPLNEGGLYAERQGFHQPEPPSQNWKSSSPLEGLSEAGIGFYSASFDLDLPKDGMSHCSSTSVTALRHPRTACRSTSTDIVCEIHKQHRTSDQLPCPRGNPELSRNELVGGDPVALDSAGGKLESLELSYTTPVLTALGEVESVDQPKYKKRKGAY", - "output": "beta-galactosidase activity ; carbohydrate metabolic process" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MEFDTIAAISTPPGEGAIAIIRLSGPEAIQIADRIFYAKNSLSEAESHTIHYGHIKEDGEVIEEVMVTVMRAPRTFTREDVVEINAHGGIVSVNRVLQLLLRNGANLAEPGEFTKRAFLNGRIDLSQAEAVMDLIRAKTDRAMGVAIRQMDGNLSRLIRNLRQEILDALAQVEVNIDYPEYDDVEEMTQRMLLEKTELVRASVEQLLQTASQGKILREGLATAIIGRPNVGKSSLLNQLIQEEKAIVTDIAGTTRDIIEEYVNVRGVPLRLIDTAGIRETEDIVEKIGVERSRKALADADFILLVLNQNEELTVEDEALFEAAAGHNYVVVLNKTDLETKLDIDRVRELAGENPIVSTSLVNDEGLEALEEAIKTLFFAGDIDAGDATYVSNVRHIALLHQALEALNGVTTGIQLGMPVDIVQIDMTRAWDLLGEITGDSVQDELLDQLFNQFCLGK", - "output": "cytoplasm ; GTP binding ; GTPase activity ; metal ion binding ; tRNA modification" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MTEEPLSAAWLTERTIYLLTLLREKRPLVHNITNLVVTNTTANALLALGASPAMVEGVEEVDSFARMADSLVINLGTMSSPRAAAMRLAMAAARQAGKPVVLDPVAVGALRYRTELARDLLEAKPHIVRGNASEIIALAGDGGGGRGVDSLVSSTAALEAASILARRTGGAVAVTGATDYVTDGTRLIGIANGHPMMTRVTGLGCTATALIGAFAAVEPDPLVAACAGLCATGLAGELAAIRADGPGSLQVEFLDALYALDSAILRDAARWVLP", - "output": "ATP binding ; hydroxyethylthiazole kinase activity ; magnesium ion binding ; phosphorylation ; thiamine biosynthetic process ; thiamine diphosphate biosynthetic process" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MPLSLWRLAIGSSRRHSLLKITSTRVLPVPRPYSTYSNNKKVIMPGEDQPAAAPAAAPAAQDAPGAPAPKKNDKKEKAKADKAAKFAAKQAAAKAKQPAAQSAPKEKKEKTPALPPYEDSTPAGEKKVIQSFEHPHFSAYNPSAVEAAWYQWWEKAGYFKPESCRKPSAGKFVIPLPPPNVTGALHCGHALANSLQDTLIRWYRMKGYETLWVPGCDHAGISTQSVVEKMLWKKEKKIRQELGREKFTDLVWEWKGEYHQRINNAQKLMGGSMDWSREAFTMDKNLTAATMETFCRLHDEGLIYRSNRLVNWCTHLNTALSGLEVETKEITGRTLLDVPGYDKKVEFGVLTHFKYQIDGSEETIEVATTRPETMLGDTGIAVNPEDPRYTHLVGKFARHPFVDRLLPIVTDNYVDKEFGTGAVKLTPAHDFNDYQLGQRHNLEFINILNENGTLNDNAGPFKGQKRFDARYTVVEELTKLGLFVKKEPNPMKIPLCEKSKDVIEPMMTEQWWVRMKEMGEAALQVVEEGKVKISPESATKSYKRWLADIQDWCISRQLWWGHRIPAYRVIFEGEEGQRENEKSEWVVGRTQEEAQAKAEAKFAGRKFTLEQDPDCLDTWFSSGLWPMAILGWPNTENLDFKKFFPTSMLETGWDILFFWVSRMIMLSLKMTGEVPFTEVYCHSLIRDSEGRKMSKSLGNVIDPLDIIRGIELEDLHAKLLVGNLKEEEVARATKYQKTAFPGGIPECGADAMRFTLLSYTTGGGDINFDIRVMHAYRRFCNKIWQASKYVLGKLPQDFMPKGELDTANFSVPEKWILHRMNVAVKGMNEALEAREFSRATKVAYQFFYDELCDVFIENSKGILSDGTPEEQQSVQQTLYHALDVALRLLHPIMPYITEELWQRLPRKQGDGETIMLAPYPAFESQLEFATEAEDYELGLKCAGGIRSLAADYNIKSDGRAFIKATTADSLATVSAQLAAIRTLCGKGVKEVNVLGADEELPRGCAVYVINAEITVLLQVGGSISDIDAEIKKITTKLQKTDLTIKKQQELLSKDGFEKVSEAVQESEKQKLADAQAAKENYQRTLEEFSKLKI", - "output": "cytosol ; mitochondrion ; aminoacyl-tRNA editing activity ; ATP binding ; valine-tRNA ligase activity ; valyl-tRNA aminoacylation" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MELLNLKKQGIDIKEQIPLSRYTFTKTGGEAEYLAFPKTTDEVEKLVKVTQENKIPLTIIGNASNLIIRDGGIDGLVIILTELKNIEVNGNEVTADAGATIVDTAFTAANHGLSGMEFAAGIPGSIGGGVFMNAGAYGGEMQEAVKSVNVLTRAGEYKTYSNQEMDFSYRHSIIQENGDIVLSATFSLKPGNKLQILDHMDYLNALRRYKQPLEYPSCGSVFKRPKGHFVGPMIIKAGLQGKQIGGAQDSTKHAGFIVNKGGATATDYLDLIHLIQKVIKEKYDIDLHTEVRIIGKEN", - "output": "cytoplasm ; FAD binding ; UDP-N-acetylmuramate dehydrogenase activity ; cell cycle ; cell division ; cell wall organization ; peptidoglycan biosynthetic process ; regulation of cell shape" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MERKFLTDLGLNPDQVNSIMAQYGKDMQEYEGLEAERDALKKTSSELSSKIEDLKANSANVEELTKQIEKLKSDNENATKQLNAQKLDFAVTSTIKDFGAKNAKAVKALLNHDDIRFDSKGNLIGLEDQLKSLKDSDSYLFAEDKPAGKPIQAFPTGNPVAGGKDVSLHQKIAQRLKG", - "output": "viral capsid assembly" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MSRPEELAPPEIFYNDSEAHKYTGSTRVQHIQAKMTLRALELLNLQPCSFILDIGCGSGLSGEILTQEGDHVWCGLDISPSMLATGLSRELEGDLMLQDMGTGIPFRAGSFDAAISISAIQWLCNADTSYNDPKQRLMRFFNTLYAALKKGGKFVAQFYPKNDDQVDDILQSAKVAGFSGGLVVDDPESKKNKKYYLVLSSGAPPQGEEQVNLDGVTMDEENVNLKKQLRQRLKGGKDKESAKSFILRKKELMKRRGRKVAKDSKFTGRKRRHRF", - "output": "cytoplasm ; nucleolus ; nucleus ; tRNA methyltransferase complex ; rRNA (guanine) methyltransferase activity ; endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) ; ribosomal small subunit export from nucleus ; rRNA (guanine-N7)-methylation" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MPLSYQHFRKLLLLDDEAGPLEEELPRLADEGLNRRVAEDLNLQLPNVSIPWTHKVGNFTGLYSSTLPVFNPNWQTPSFPDIHLHQDIINKCEQFVGPLTVNEKRRLKLSMPARFYPNSTKYLPLEKGIKPYYPDNVVNHYFQTRHYLHTLWQAGILYKRETTRSASFCGSPYSWEQELQHGAESFHQQSAGIFSRAPVGSSIQSKHQQSRLGLQPQKGLLARGNEGRSWSVRSRVHPTTWRSFGVEPSSSGHTNNFASKSASCLHQSAVRKAAYPTFSTTKRHSSSGHAVELHNISSSSAGSQSKGPVFSCWWLQFRNIEPCSEYCLSHLVSLLDDWGPCTEHGEHHIRIPRTPARVTGGVFLVDKNPHNTAESRLVVDFSQFSRGSTRVPWPKFAVPNLQSLTNLLSSNLSWLSLDVSAAFYHLPLHPAAMPHLLVGSSGLSRYVARLSSNSRILDHQHGTMQNLHDSCSRNLFDSLMLLYKTFGRKLHLYSHPIIMGFRKIPMGVGLSPFLLAQFTSAICSVVRRAFPHCLAFSYMDDVVLGAKSVQHLESLYTAVTNFLLSLGIHLNPNKTKRWGYSLHFMGYVIGSWGTLPQEHIVQKIKNCFRKLPVNRPIDWKVCQRIVGLLGFAAPFTQCGYPALMPLYACIQAKQAFTFSPTYKAFLSQQYSTLYPVARQRSGLCQVFADATPTGWGLVMGHQRMRGTFVAPLPIHTAELLAACFARSRSGAKLIGTDNSVVLSRKYTSFPWLLGCAANWILRGTSFVYVPSALNPADDPSRGRLGLYRPLIRLLFQPTTGRTSLYAVSPSVPSHLPVRVHFASPLHVAWRPP", - "output": "DNA binding ; DNA-directed DNA polymerase activity ; metal ion binding ; RNA-directed DNA polymerase activity ; RNA-DNA hybrid ribonuclease activity ; DNA replication ; suppression by virus of host innate immune response" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MSLQSIKYSRGSLEILDQLLLPGQSKYVVVRGVEDGWKVINKMQVRGAPAIAIVGCLSLAVEINPEDFENKKSLRQEIEGKLNYLVSARPTAVNMKIAADELITLANELYKDEATDVTQMKHRFLDATEAMLKKDIADNRAIGANGAQAILQRVAKAGKTPAGSTGSVRVLTHCNTGSLATAGYGTALGVVRQLAELGKLEHVYCTETRPYNQGARLTAYELVHEKFPATLVLDSMVAALLRAKNVAAVVVGADRVASNGDTANKIGTYQIAVVAKHHDVPFYVAAPLTSIDLAIPGGDHIIIEERPDREMTHVGEHRIAAPGINCWNPAFDVTPASLITGIITERGVFKPAELKEAITKLLES", - "output": "cytoplasm ; nucleus ; S-methyl-5-thioribose-1-phosphate isomerase activity ; L-methionine salvage from methylthioadenosine ; L-methionine salvage from S-adenosylmethionine" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MNRVAVVVLGDIGRSPRMQYHSMSLSKLENTKVTLIGYRESEPHPQIVNNDSITIEPLKPFPISMSNSFKKIPLISIFMWPLLAICKVLFQIIQLMYVLLVKVPSPLNTILVQSPPAIPTIFVMQIVCWIRGVHLVIDWHNLGYTLLKLSLSKSDNHPIIRLAKFIERYFAKNAYAHLFVTNEMKIQLVRDWNLKGKTFVFHDKASPIFKSLTDREQEEFLKTFINKYSIKGEDKVYIESVISKKSIRNPKQQTSIIISSTSWTQDEDFSILLDAIVKYDIEHAINNNNNKVEEAQDESVVLAENLLFIITGKGPQKEYYQEKINSLSLKKSRIITVWLDSEDYPKLLACCDLGVSLHNSSSGIDLPMKVVDMFGCCLPVLAIDFKCIGELVKVNYNGFLFKDSDQLHQLLNQLFTHPTNNNTITNTNNNKNLILEKMRKNLTKDRETDTWESNWLTIKPLFIPSSSSSSSSSSSSSSSSSSSSSSNSKSKKD", - "output": "endoplasmic reticulum ; endoplasmic reticulum membrane ; lipid droplet ; chitobiosyldiphosphodolichol beta-mannosyltransferase activity ; mannosyltransferase activity ; protein glycosylation" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MVQLNQNFINTIAQELPAHLSMDDFIAACSRPLRRSIRVNTLKISSEDFKQLMLPKGWTFEPIPWCEDGFWISYDEEEQLGNALEHIQGLFYIQEASSMLPPTALFTPNADWQCVLDLASAPGSKTTQMAALMNNQGLLVANEYSASRVKVLHANVLRMGASHCALTHFDGRVFGEYLYESFDAVLIDAPCGGEGTVRKDADALKSWSLDEVLEISETQKALIESAFLALKPGGSLVYSTCTLNRHENQGVCEYLQQTYGDAVQFESLSQLFDGAEKATTPEGFLHVWPQIYDSEGFFVAKLTKTRSVPRLQPEPKLQKNFPFTEASAKQAKAIQAYFADDLGIKLPDDLIMVRDDEFWLFPHEFRDFIGKMRFQRIGVKLADHSKHGFKVRHEAIIALAGKALTAGAANGAKVVDVSDEQAKEYLMGRDIPLDTAGKAQGEVIVCYGGAPLGMAKHLGNKLKNSLPRDLVKDKVLLLPPQA", - "output": "cytoplasm ; RNA binding ; rRNA (cytosine) methyltransferase activity" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MPDLQELWNYLQEKFQTDLTTVGFNAWIKTAKPLAFRANELLIEVPSVLHKEYWENNLATKVVEGAYEFAEIELTPIFVLPGESDNLTPLEPEEEHVLTKAETPTFLRETHLNSKYTFDTFVTGKGNQMAHAAALVVSEEPGVLYNPLFLYGGVGLGKTHLMQAIGHQLLESKPETNVKYVTSEAFANDFINSIQTKNQEKFRQEYRNVDLLLVDDIQFFADKEGTQEEFFHTFNDLYNDKKQIVLTSDRLPNEIPKLQERLVSRFKWGLPVDITPPDLETRIAILRNKADAEHLEIPEDTLSYIAGQIDSNVRELEGALVRVQAYATMQNAEITTSLAADALKGLKLNGKSSQLSIAKIQSVVAKYYSLTVADLKGRKRVKEIVLPRQIAMYLAREMTDSSLPKIGQEFGGKDHTTVMHAHERISQSLTTDQNLKDAILDLKNTMKS", - "output": "cytoplasm ; ATP binding ; DNA replication origin binding ; DNA replication initiation ; regulation of DNA replication" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MKCPRCGKQEIRVLESRSAEGGQSVRRRRECMSCGYRFTTYERIEFMPIMVIKRDGSRESFNRNKILQGVMRACQKTQVSVKQMEELVNEIEEKLQLEDVQEVTTLRIGEMVLERLQRLSEVAYVRFASVYRKFQGIKDFVTELEQLERLETHLRRDLERPLRNSPPSESESTASPDWVGGIPQLLDQNDTSSNLSEIPK", - "output": "ATP binding ; DNA binding ; zinc ion binding ; negative regulation of DNA-templated transcription" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MEDTQAIDWDVEEEEETEQSSESLRCNVEPVGRLHIFSGAHGPEKDFPLHLGKNVVGRMPDCSVALPFPSISKQHAEIEILAWDKAPILRDCGSLNGTQILRPPKVLSPGVSHRLRDQELILFADLLCQYHRLDVSLPFVSRGPLTVEETPRVQGETQPQRLLLAEDSEEEVDFLSERRMVKKSRTTSSSVIVPESDEEGHSPVLGGLGPPFAFNLNSDTDVEEGQQPATEEASSAARRGATVEAKQSEAEVVTEIQLEKDQPLVKERDNDTKVKRGAGNGVVPAGVILERSQPPGEDSDTDVDDDSRPPGRPAEVHLERAQPFGFIDSDTDAEEERIPATPVVIPMKKRKIFHGVGTRGPGAPGLAHLQESQAGSDTDVEEGKAPQAVPLEKSQASMVINSDTDDEEEVSAALTLAHLKESQPAIWNRDAEEDMPQRVVLLQRSQTTTERDSDTDVEEEELPVENREAVLKDHTKIRALVRAHSEKDQPPFGDSDDSVEADKSSPGIHLERSQASTTVDINTQVEKEVPPGSAIIHIKKHQVSVEGTNQTDVKAVGGPAKLLVVSLEEAWPLHGDCETDAEEGTSLTASVVADVRKSQLPAEGDAGAEWAAAVLKQERAHEVGAQGGPPVAQVEQDLPISRENLTDLVVDTDTLGESTQPQREGAQVPTGREREQHVGGTKDSEDNYGDSEDLDLQATQCFLENQGLEAVQSMEDEPTQAFMLTPPQELGPSHCSFQTTGTLDEPWEVLATQPFCLRESEDSETQPFDTHLEAYGPCLSPPRAIPGDQHPESPVHTEPMGIQGRGRQTVDKVMGIPKETAERVGPERGPLERETEKLLPERQTDVTGEEELTKGKQDREQKQLLARDTQRQESDKNGESASPERDRESLKVEIETSEEIQEKQVQKQTLPSKAFEREVERPVANRECDPAELEEKVPKVILERDTQRGEPEGGSQDQKGQASSPTPEPGVGAGDLPGPTSAPVPSGSQSGGRGSPVSPRRHQKGLLNCKMPPAEKASRIRAAEKVSRGDQESPDACLPPTVPEAPAPPQKPLNSQSQKHLAPPPLLSPLLPSIKPTVRKTRQDGSQEAPEAPLSSELEPFHPKPKIRTRKSSRMTPFPATSAAPEPHPSTSTAQPVTPKPTSQATRSRTNRSSVKTPEPVVPTAPELQPSTSTDQPVTSEPTSQVTRGRKSRSSVKTPETVVPTALELQPSTSTDRPVTSEPTSQATRGRKNRSSVKTPEPVVPTAPELQPSTSTDQPVTSEPTYQATRGRKNRSSVKTPEPVVPTAPELRPSTSTDRPVTPKPTSRTTRSRTNMSSVKTPETVVPTAPELQISTSTDQPVTPKPTSRTTRSRTNMSSVKNPESTVPIAPELPPSTSTEQPVTPEPTSRATRGRKNRSSGKTPETLVPTAPKLEPSTSTDQPVTPEPTSQATRGRTNRSSVKTPETVVPTAPELQPSTSTDQPVTPEPTSQATRGRTDRSSVKTPETVVPTAPELQASASTDQPVTSEPTSRTTRGRKNRSSVKTPETVVPAAPELQPSTSTDQPVTPEPTSRATRGRTNRSSVKTPESIVPIAPELQPSTSRNQLVTPEPTSRATRCRTNRSSVKTPEPVVPTAPEPHPTTSTDQPVTPKLTSRATRRKTNRSSVKTPKPVEPAASDLEPFTPTDQSVTPEAIAQGGQSKTLRSSTVRAMPVPTTPEFQSPVTTDQPISPEPITQPSCIKRQRAAGNPGSLAAPIDHKPCSAPLEPKSQASRNQRWGAVRAAESLTAIPEPASPQLLETPIHASQIQKVEPAGRSRFTPELQPKASQSRKRSLATMDSPPHQKQPQRGEVSQKTVIIKEEEEDTAEKPGKEEDVVTPKPGKRKRDQAEEEPNRIPSRSLRRTKLNQESTAPKVLFTGVVDARGERAVLALGGSLAGSAAEASHLVTDRIRRTVKFLCALGRGIPILSLDWLHQSRKAGFFLPPDEYVVTDPEQEKNFGFSLQDALSRARERRLLEGYEIYVTPGVQPPPPQMGEIISCCGGTYLPSMPRSYKPQRVVITCPQDFPHCSIPLRVGLPLLSPEFLLTGVLKQEAKPEAFVLSPLEMSST", - "output": "chromosome ; focal adhesion ; nuclear body ; nucleoplasm ; nucleus ; DNA repair ; mitotic intra-S DNA damage checkpoint signaling ; positive regulation of transcription initiation by RNA polymerase II" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MSRGNELVFKAKKTSEKISENIHIFANDPSLAFFRVQEHVRKVTPAIFEKRDEVFQLQNNLQGHCYDMEYGIQALRTIEKSESIFENIQEMIKASIFLKQQLKYEESRKKVKKDSTKSSVYKRFSAHLALDLPDLPDFGGVMRETSQRMENMIGPGTATGRTEAQAATSSNPGELQRSYTTLH", - "output": "BORC complex ; lysosomal membrane" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MKMVKSIAAGLTAAAAIGAAAAGVTSIMAGGPVVYQMQPVVFGAPLPLDPASAPDVPTAAQLTSLLNSLADPNVSFANKGSLVEGGIGGTEARIADHKLKKAAEHGDLPLSFSVTNIQPAAAGSATADVSVSGPKLSSPVTRNVTFVNQGGWMLSRASAMELLQAAGN", - "output": "extracellular region" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MPTAANLLAIMPFPDIDPIAFSIGPLAIHWYGLAYVAGILLGWAYARRLAANESLWPGNASPMTRTQLDDFIVWAALGVVLGGRLGYIFFYDLPAVLRSPVRALEIWNGGMSFHGGLTGTTIAMIIFARRNGIPIWSLFDIVATVVPFGLFFGRIANFINGELWGRLTDVPWAVVFPTGGPFARHPSQLYEAGLEGIVLLLVLAALVYGMRALKSPGFITGVFVCGYALSRIFVEFFREPDAQLGYLLGTNWLTMGMVLSSPMILLGLWAMLRARRQAALQL", - "output": "plasma membrane ; phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity ; lipoprotein biosynthetic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MNKEILAVVEAVSNEKALPREKIFEALESALATATKKKYEQEIDVRVQIDRKSGDFDTFRRWLVVDEVTQPTKEITLEAARYEDESLNLGDYVEDQIESVTFDRITTQTAKQVIVQKVREAERAMVVDQFREHEGEIITGVVKKVNRDNISLDLGNNAEAVILREDMLPRENFRPGDRVRGVLYSVRPEARGAQLFVTRSKPEMLIELFRIEVPEIGEEVIEIKAAARDPGSRAKIAVKTNDKRIDPVGACVGMRGARVQAVSTELGGERIDIVLWDDNPAQFVINAMAPADVASIVVDEDKHTMDIAVEAGNLAQAIGRNGQNVRLASQLSGWELNVMTVDDLQAKHQAEAHAAIDTFTKYLDIDEDFATVLVEEGFSTLEELAYVPMKELLEIEGLDEPTVEALRERAKNALATIAQAQEESLGDNKPADDLLNLEGVDRDLAFKLAARGVCTLEDLAEQGIDDLADIEGLTDEKAGALIMAARNICWFGDEA", - "output": "cytoplasm ; DNA-binding transcription factor activity ; nucleotide binding ; RNA binding ; DNA-templated transcription termination ; transcription antitermination" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MANPKPQAKKKIKKNIPKGIAHIHSTFNNTIVTVSDEKGNVLSWSSAGAIGFKGSKKSTPYAAQLISEAAAKGAMDNGVKTVSVEVKGPGPGRDAAIRALQMAGLEITSIKDTTPIPHNGVRPRKRPRG", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MEAQNQEVAALVEKIAGLHAAISKLPSLSPSAEVDALFTDLVTACVPASPVDVAKLGPEAQAMREELIRLCSAAEGHLEAHYADMLAAFDNPLDHLARFPYYGNYVNLSKLEYDLLVRYVPGIAPTRVAFVGSGPLPFSSLVLAAHHLPDAVFDNYDRCGAANERARRLFRGADEGLGARMAFHTADVATLTGELGAYDVVFLAALVGMAAEEKAGVIAHLGAHMADGAALVVSARHGARGFLYPIVDLEDIRRGGFDVLAVYHPDDEVINSVIVARKADPRRGGGLAGARGAVPVVSPPCKCCKMEAAAGAFQKAEEFAAKRLSV", - "output": "nicotianamine synthase activity ; nicotianamine biosynthetic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MRPSNRTPEQNREIKITRHYTDYAEGSVLIEMGNTKVLCNASVSGSVPRFLKGKGKGWVTAEYAMLPRATHIRNMREAAKGKQGGRTLEIQRLIARSLRAAVDLNALGENMITVDCDVIQADGGTRTAAITGGCIALADALNWMVKKGKLKKSPLKQMIAAVSVGIYQGTPVCDLDYAEDSNAETDTNVVMTESGGLIEIQATAEDGAFSHEQLLSMLSLAKGGIEALVVEQKKALNAE", - "output": "3'-5'-RNA exonuclease activity ; phosphate-dependent exonuclease activity ; tRNA binding ; rRNA catabolic process ; rRNA processing ; tRNA processing" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MSDSQTLVVKLGTSVLTGGSRRLNRAHIVELVRQCAQLHAAGHRIVIVTSGAIAAGREHLGYPELPATIASKQLLAAVGQSRLIQLWEQLFSIYGIHIGQMLLTRADMEDRERFLNARDTLRALLDNHIVPVINENDAVATAEIKVGDNDNLSALAAILAGADKLLLLTDQQGLFTADPRSNPQAELIKDVYGVDDALRSIAGDSVSGLGTGGMSTKLQAADVACRAGIDTIIASGSKPGVIGDVMEGISVGTRFHAQASPLENRKRWIFGAPPAGEITVDEGATAAMLERGSSLLPKGIKSVTGNFSRGEVIRICNLQGRDIAHGVSRYNSDALRRIAGHHSQQIDAILGYEYGPVAVHRDDMITR", - "output": "cytoplasm ; ATP binding ; glutamate 5-kinase activity ; RNA binding ; L-proline biosynthetic process ; phosphorylation" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MPRYRLLVEYDGRPYAGFQAQATLPSVQGAIEAAVKAFCGQEVRIAAAGRTDTGVHATGQVVHVDLDKDWPAQTVFNALNAHLTREAVSILSAEVAEEGWHARFSANERRYLYRILNRRAPPALDKGRVWHMKKDLDHEAMHAAAQHLIGLHDFTTFRDMHCQSKSPVKTLDVARVRRVGEEIHLDFEARSFLHRQVRSMTGTLVEVGAGRWTVDDVKAALEARDRRECGPVAPADGLYLVGVGYGD", - "output": "RNA binding ; tRNA pseudouridine synthase activity ; tRNA pseudouridine synthesis" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MKTLLLTLVVVTIVCLDLGNSLKCYVSREGKTQTCPEGEKLCEKYAVSYFHDGRWRYRYECTSACHRGPYNVCCSTDLCNK", - "output": "extracellular space ; acetylcholine receptor inhibitor activity ; ion channel regulator activity ; toxin activity ; envenomation resulting in modulation of process in another organism ; modulation of process of another organism ; negative regulation of signaling receptor activity" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MVGRRALIVLAHSERTSFNYAMKEAAVAALKKKGWEVVESDLYAMNFNPIISRKDITGKLKDPENFQYPAESVLAYKEGHLSPDIVAEQKKLEAADLVIFQFPLQWFGVPAILKGWFERVFVGEFAYTYAAMYDKGPFRSKKAVLSITTGGSGSMYSLQGIHGDMNVILWPIQSGILHFCGFQVLEPQLTYSIGHTPADARIQILEGWKKRLENIWDETPLYFAPSSLFDLNFQAGFLMKKEVQDEEKNKKFGLSVGHHLGKSIPTDNQIKARK", - "output": "cytosol ; NADH dehydrogenase (quinone) activity ; NADPH dehydrogenase (quinone) activity ; cellular response to oxidative stress ; negative regulation of protein catabolic process ; removal of superoxide radicals ; ubiquinone metabolic process ; vitamin E metabolic process ; vitamin K metabolic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MAATAMRMIISIIFISTYMTHITLCQNITEEFYQSTCSAVSRGYLSALRTGWYTSVVTIELSKIQKNVCKSTDSKVKLIKQELERYNNAVIELQSLMQNEPASFSRAKRGIPELIHYTRNSTKRFYGLMGKKRKRRFLGFLLGIGSAIASGVAVSKVLHLEGEVNKIKNALLSTNKAVVSLSNGVSVLTSKVLDLKNYIDKELLPKVNNHDCRISNIETVIEFQQKNNRLLEIAREFSVNAGITTPLSTYMLTNSELLSLINDMPITNDQKKLMSSNVQIVRQQSYSIMSVVKEEVIAYVVQLPIYGVIDTPCWKLHTSPLCTTDNKEGSNICLTRTDRGWYCDNAGSVSFFPQAETCKVQSNRVFCDTMNSLTLPTDVNLCNTDIFNTKYDCKIMTSKTDISSSVITSIGAIVSCYGKTKCTASNKNRGIIKTFSNGCDYVSNKGVDTVSVGNTLYYVNKLEGKALYIKGEPIINYYDPLVFPSDEFDASIAQVNAKINQSLAFIRRSDELLHSVDVGKSTTNVVITTIIIVIVVVILMLIAVGLLFYCKTRSTPIMLGKDQLSGINNLSFSK", - "output": "host cell Golgi membrane ; host cell plasma membrane ; membrane ; viral envelope ; virion membrane ; entry receptor-mediated virion attachment to host cell ; fusion of virus membrane with host plasma membrane ; positive regulation of syncytium formation by virus ; viral entry into host cell" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MNRAFCLLARSRRFPRVPSAGAVLSGEAATLPRCAPNVVRMASQNSFRIEYDTFGELKVPTDKYYGAQTVRSTMNFKIGGATERMPIPVIKAFGILKRAAAEVNQEYGLDPKIASAIMKAADEVAEGKLNDHFPLVVWQTGSGTQTNMNVNEVISNRAIEMLGGELGSKKPVHPNDHVNKSQSSNDTFPTAMHIAAALEVHQVLLPGLQKLHDALSAKSKEFAQVIKIGRTHTQDAVPLTLGQEFSGYVQQVQYAMERIKAAMPRIYELAAGGTAVGTGLNTRIGFAEKVAAKVAALTGLPFVTAPNKFEALAAHDALVELSGAMNTTACSLMKIANDIRFLGSGPRSGLGELILPENEPGSSIMPGKVNPTQCEAMTMVAAQVMGNHVAVTVGGSNGHFELNVFKPMMIKNVLHSARLLGDASVSFTENCVVGIQANTERINKLMNESLMLVTALNPHIGYDKAAKIAKTAHKNGSTLKETAIELGYLTAEQFDEWVKPKDMLGPK", - "output": "chromosome ; cytosol ; mitochondrial matrix ; mitochondrion ; nucleus ; tricarboxylic acid cycle enzyme complex ; fumarate hydratase activity ; DNA damage response ; DNA repair ; fumarate metabolic process ; homeostasis of number of cells within a tissue ; malate metabolic process ; negative regulation of histone H3-K36 methylation ; positive regulation of cold-induced thermogenesis ; positive regulation of double-strand break repair via nonhomologous end joining ; regulation of arginine metabolic process ; tricarboxylic acid cycle ; urea cycle" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTRSGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPELYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRVLMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLGHKVNPFKALYNRIDMKQVEALVEASKEEVKATTAPVTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALIGRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK", - "output": "cytoplasm ; ATP binding ; metal ion binding ; methionine-tRNA ligase activity ; tRNA binding ; methionyl-tRNA aminoacylation" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MDFGSVMNQAATPCSPAVNYELPSPGQSITKQVDTPDATRSPRGGQAHRKASRSMSVTAAMESSCELDLVYITERIIAVSYPSTAEEQSFRSNLREVAHMLKSKHGDNYVLFNLSERRHDISKLHPKVLDFGWPDLHTPALEKICSICKAMDTWLNAAAHNVVVLHNKGNRGRLGVVVAAYMHYSNISASADQALDRFAMKRFYEDKVVPVGQPSQKRYIHYFSGLLSGSIKMNNKPLFLHHVIMHGIPNFESKGGCRPFLKIYQAMQPVYTSGIYNVQGDSQTGICITIEPGLLLKGDILLKCYHKKFRSPTRDVIFRVQFHTCAVHDLDIVFGKEDLDEAFRDERFPEYGKVEFVFSYGPEKIQGMEHLENGPSVSVDYNTSDPLIRWDSYENFNIQREDSTEGTWAEPALPGKHLEKEVGHTQGPLDGSLYAKVKKKDSLHGSIGAVNAARLPLSAAPNHVEHTLSVSSDSGNSTASTKTDRTDEPGAPGAPTGHAVLSPEEKRELDRLLVGFGLESAPPMHNHAPGPAPARLPAGPGRHVVPAQVHVNGAGTPLLAERETDILDDELPNQDGHSVGSLGTLSSLDGTTTASEAGFHEAPRVGSLSSLPNGPASYNGAEKMLKEGLYEAEPLSNGAYPYSNQNTLMGHHLRDPLAHLRPSASAQEHLAGYPQRQPASTSPAWLQPPVPQPYLYGYDLPSAHRSQSFPAVGTAKYEANLALPQAPARSTSSREAVQRGLNSWQQQGGSRPPSQLHDGGLESHSPSLSSCSPQPSPLQPMPPHSHSMPEFPRAPSRREIEQSIEALDVLMLDLAPSVHKSQSVPSAATRQDKPAAMLSSLSAQPLSGHYAQPTPQVVQPRSFGTSVGTDPLAKAYSPGPLVPAARSTAEPDYTVHEYRETYTPYSYQPVPEPRSYGSAPASILPLSASYSPAGSQQLLVSSPPSPTAPAQSQLPHKGLESYEDLSRSGEEPLNLEGLVAHRVAGVQSREKSPEESTVPARRRTPSDSHYEKSSPEPGSPRSPTVLSPEVVSTIAANPGGRPKEPHLHSYKEAFEEMESASPSSLTSGGVRSPPGLAKTPLSALGLKPHNPADILLHPVGELEGEAGADSEEEPRSYVESVARTATTGRAGNLPAAQPVGLEVPARNGAFGNSFTVPSPVSTSSPIHSVDGASLRSYPSEGSPHGTVTPPHAVAETAYRSPMVSQTPSAHSSYQTSSPSSFQAGTLGSPYASPDYPDGRAGFQPDPQARQQPQVSVVGVHALPGSPRTLHRTVATNTPPSPGFGRRAANPAVASVPGSPGLGRHTVSPHAPPGSPSLARHQMAAVPPGSPMYGYSSPEERRPTLSRQSSASGYQPPSTPSFPVSPAYYPGTSTPHSSSPDSAAYRQGSPTPQPALPEKRRMSAGERSNSLPNYATVNGKASSPLSSGMSSPSSGSAVAFSHTLPDFSKFSMPDISPETRANVKFVQDTSKYWYKPDISREQAIALLKDREPGAFIIRDSHSFRGAYGLAMKVASPPPTVMQQNKKGDITNELVRHFLIETSPRGVKLKGCPNEPNFGCLSALVYQHSIMPLALPCKLVIPDRDPMEEKKDAASTTNSATDLLKQGAACNVLFINSVEMESLTGPQAISKAVAETLVADPTPTATIVHFKVSAQGITLTDNQRKLFFRRHYPLNTVTFCDLDPQERKWTKTDGSGPAKLFGFVARKQGSTTDNVCHLFAELDPDQPAAAIVNFVSRVMLGSGQKR", - "output": "cell surface ; cytoplasm ; cytoskeleton ; focal adhesion ; actin binding ; phosphoprotein phosphatase activity ; fibroblast migration" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MNKKKKYVHTKQFNSHDCGLACISSILKFHNLNYGIDFLLDLIGDKEGYSLRDLIVIFKKMGIKTRPLELQENKTFEALKQIKLPCIALLEGEEYGHYITIYEIRNNYLLVSDPDKDKITKIKKEDFESKFTNFILEIDKESIPEKEKDQKKHSYFFKDILFRNKLIVFVILLTSLFVVGLAVAGSFYIKFLVDLIIPRSLRESLITITLIFISMVLIRCIFDFVRSYLIIKLSYKVDKEMSNVYFNKVTKLPINFFENREDGEVISRFNDGIYIKDFFSANFVTAIIDIILILGLGVILYRTNNILFLTIILPILLLSCLAILFFDHLKKKNQKLMEDKAKSTSLLINFLKNMTTVYSLNKTSFFLEKFHLTYDKQLNSTFSVAKAVISNEILKGLIQNSFTIIILWVGTRQVLNDSMSLGTLLFINTLAAFLLSSLDRILSMQSDLQQAHVASIRFFDVVNYPVQQDSNENLTELDFIQNIKTVNLNIGADPMRYIVEDINLILDRKDKVLIIGESGTGKSTFAKSLSKLYKVPDKSIYLNGLDINRYDHLSIRKRIVYIDENPFLFKGTIKENLCMGEIFDQNEIENACIMSQCHEFICNLDKQYSYKLSENGSNLSTGQKQRLALARAILHQPQVLILDESLSNIDPDNTKLIYETLHRMDCLIILITHNDPSNFKYNKKLVFRNNRIIESSYSENKEYSI", - "output": "host cell membrane ; membrane ; ABC-type transporter activity ; ATP binding ; cysteine-type peptidase activity ; antibiotic biosynthetic process ; bacteriocin transport ; protein transport ; proteolysis" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MKNRTLGSVFIVAGTTIGAGMLAMPLAAAGVGFSVTLILLIGLWALMCYTALLLLEVYQHVPADTGLGTLAKRYLGRYGQWLTGFSMMFLMYALTAAYISGAGELLASSISDWTGISMSATAGVLLFTFVAGGVVCVGTSLVDLFNRFLFSAKIIFLVVMLVLLLPHIHKVNLLTLPLQQGLALSAIPVIFTSFGFHGSVPSIVSYMDGNIRKLRWVFIIGSAIPLVAYIFWQVATLGSIDSTTFMGLLANHAGLNGLLQALREMVASPHVELAVHLFADLALATSFLGVALGLFDYLADLFQRSNTVGGRLQTGAITFLPPLAFALFYPRGFVMALGYAGVALAVLALIIPSLLTWQSRKHNPQAGYRVKGGRPALVVVFLCGIAVIGVQFLIAAGLLPEVG", - "output": "plasma membrane ; aromatic amino acid transmembrane transporter activity ; symporter activity" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MGSLSIWHWLIVLLIVALVFGTKKLRNIGSDLGGAVKGFKEGMKDGETPEGQQRDQLSRTNTVDVDAKEKAPHSGDSR", - "output": "TAT protein transport complex ; protein transmembrane transporter activity ; protein transport by the Tat complex" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MAPKAAEKKPAGKKPAEKAPAEKLPKAEKKITKEGGSEKKKKKSKKNIETYKIYIFKVLKQVHPDIGISGKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELSKHAVSEGTKAVTKFTSS", - "output": "nucleosome ; nucleus ; DNA binding ; protein heterodimerization activity ; structural constituent of chromatin" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "METIAKHLDVCQEQLLELYEENSNNLTKHIQHWKCIRYECVLLHKAKQMGLNHIGMQVVPALTVSQTKGHQAIEMQMTLETLLNSDYGMEPWTLQDTSREMWLTAPKYCFKKQGQTVEVKYDCNADNIMEYVSWKYIYVHDTDKWVKVTGHIDYKGLYYVHGGHKTYYTNFEKEAKKYGNSLQWEVCIGSSVICSPASISSTVQDVSIAGPASHTSSSTTTTLAQASPALPTCTSEERVDPPPCKRPRGPTTNTNNARDTVSVRHSDSVDSTNNNIYPNSYNSNKGRDNNFCTATPVVQLQGDPNCLKCLRYRLHAKHKTLFVAASSTWRWTCSDTSSKHALVTLTYVNEEQREQFLNTVRLPPTVTYKVGYMSLQLL", - "output": "host cell nucleus ; DNA binding ; DNA-binding transcription factor activity ; nucleotide binding ; DNA replication ; regulation of DNA replication ; viral DNA genome replication" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MTQYIPDTQRPIGLFDSGEGGLTVARAVADLLPQENLIYACDTAHFPYGPRPLAEVRAFFRRFMEFFVEQNCKLVIVACNTATAAAIDLLLADAFPIPALGVVQPGAAMAAEASVTGRIGVAATQGTCDSGIYPQTIRLFRPDAYVVQQACPILVIRAEEGVISGPEVRREVERCLAPILAERVDTLVLGCTHFPHMAKVIQDVVGPAVRLVDPGKATAVQVADLLRRRGLLNPGPGPGQRRAFTTGDPQRFLEVACRLWPGGVDAAAHIHLWSQQE", - "output": "glutamate racemase activity ; cell wall organization ; peptidoglycan biosynthetic process ; regulation of cell shape" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MSIIINNVSKQFGDFTALKDINLEVPDGKLVALLGPSGSGKSTLLRAIAGLEEPDQGQIIINGQDATHVDIRKRNIGFVFQHYALFKHLTIRQNIAFGLEIRKHPPAKTKERVEELLSLIQLEGLGNRYPSQLSGGQRQRVALARALAVQPQVLLLDEPFGALDAKVRKELRAWLRKLHDEVHLTSVFVTHDQEEAMEVADEIVVMSNGKIEQVGTAEEIYEHPASPFVMGFIGEVNVLPRNASLFNYHAFEPHSSNNGHQEPVFVRPHDFELLTEADDASVAGTIKRVIHLGSEIQVEVLLMDNTAVLAYLNREQGQQLNPKAGKKVFIKPRVAKVFAGASSAASTHFIYGTGI", - "output": "ATP-binding cassette (ABC) transporter complex ; ABC-type sulfate transporter activity ; ABC-type thiosulfate transporter activity ; ATP binding ; ATP hydrolysis activity ; sulfate transport" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MACSTLSKSPKDKIDPRDLLIPLILFLSLKGARSAAPGSSPHQVYNITWEVTNGDRETVWAISGNHPLWTWWPVLTPDLCMLALSGPPHWGLEYQAPYSSPPGPPCCSGSSGNVAGCARDCNEPLTSLTPRCNTAWNRLKLDQVTHKSSEGFYVCPGSHRPREAKSCGGPDSFYCASWGCETTGRVYWKPSSSWDYITVDNNLTSNQAVQVCKDNKWCNPLAIRFTNAGKQVTSWTTGHYWGLRLYVSGQDPGLTFGIRLSYQNLGPRIPIGPNPVLADQLSFPLPNPLPKPAKSPPASSSTPTLISPSPTPTQPPPAGTGDRLLNLVQGAYQALNLTNPDKTQECWLCLVSGPPYYEGVAVLGTYSNHTSAPANCSVASQHKLTLSEVTGRGLCIGTVPKTHQALCNTTLKAGKGSYYLVAPTGTMWACNTGLTPCLSATVLNRTTDYCVLVELWPRVTYHPPSYVYSQFEKSHRHKREPVSLTLALLLGGLTMGGIAAGVGTGTTALVATQQFQQLHAAVQDDLKEVEKSITNLEKSLTSLSEVVLQNRRGLDLLFLKEGGLCAALKEECCFYADHTGLVRDSMAKLRERLSQRQKLFESSQGWFEGWFNRSPWFTTLISTIMGPLIILLLILLFGPCILNRLVQFVKDRISVVQALVLTQQYHQLKPLEYEPQ", - "output": "host cell plasma membrane ; membrane ; viral envelope ; virion membrane ; metal ion binding ; fusion of virus membrane with host plasma membrane ; suppression by virus of host antigen processing and presentation ; viral entry into host cell ; virion attachment to host cell" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MSETSPHRSGSVAVIGRPNVGKSTLTNALVGAKVSIVSNRPQTTRHRLLGIATFPEGQLMLVDTPGLHREQKRAMNRVMNRAARGSLEGVDAAVLVIEAGRWDEEDTLAFRVLSDADVPVVLVVNKVDRLKDKTALFPFLAQVSEGRTFAAVHPVSALKRKGLEALVSDLLKLVPEAEAMYGEDEITDRSQRFLAGELVREQLMRQLGEELPYATTVEIERFAEDGALLRIGAVIWVEREGQKAIVIGKGGTRLKDIGGKARLQMERLFGAKVFLETWVRVREGWSDDEAALKAFGYD", - "output": "cytoplasm ; plasma membrane ; GTP binding ; GTPase activity ; small ribosomal subunit rRNA binding ; ribosomal small subunit biogenesis" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MSDYLVKSIDKTKNLRLLTITAKDVVGEAQKRHDLWSASAAVLGRTLVGSLLLAGAELTDKEELTVRLLGNGPVGPTIVTAMSDLKVKGYVKNPHIALSPKKNGHIDVKKAVGQGMLEVTKDLGLKEPYTGQVPIVSGEIAEDFAYYLTKSEQIPSAVGLSVFVNPNNSIGEAGGFMLQALPGASDALITETIKRIKALPALSTEFLDGMTPEDLARKILGTDCKILEKDDVAFSCDCSKEKYAGILETLKSSQLKAMINEDHGAELTCNFCGNKYHYTENELKDILAKKKEEKDY", - "output": "cytoplasm ; unfolded protein binding ; protein folding" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MLTGQHHIPGIESPLMVVLWRVAAGVFLPLVPTMAVFGNVLVILSVYRERNLQTVTNMLIVSLAVSDLFVAIGVMSFGVYYEWNGFKWGLGSFFCHVYQALDVACSTASILNLLAISLDRYIAIGHPISYAQYGARGGRAMISITIVWGVSCAVALPLLLGVNPMENDQCELANPWFNMISSIFSFFIPCIAMIILYTIIFRRLRQRERARSLRQAQRSETDKISSALLGGAQIARQMGKHFKNRTDQILLEISFQTSSFPTISESSDDGSTISPMINSFNNFLPKKSQYPSTLIPAIPECGSMPNLTIIERPAPPEKEKDIELSIMDLHDTVEMLDDKYTSAMITRSFGEELEEILPFIDGSTSVKNSREQLHATRSNTSTTRLLDVKPELRSISVPSIQDEKKMNSRPPENPFAHQNGTNKQRLLPNPGILMKSKSTTLLKTNGYLDTDSLNNNRNSHKKSTADLLPNDDYSFTDSMRVYKNRLFKSLSRATSGWNKPRPSRHMVKKATKQMRREHKATVTLAVVLAVFLFCWLPFFILHLSNSICLVIDSNSDCIGFLPLYLATWLGYLNSSLNPLIYTVFDQRFRNAFRNILSCGFFKKR", - "output": "plasma membrane ; synapse ; dopamine neurotransmitter receptor activity, coupled via Gi/Go ; G protein-coupled receptor activity ; adenylate cyclase-activating adrenergic receptor signaling pathway" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MTAHIGLSAQHVVDSLGHPDGASRPPVSAESLSRASELLQSNHDTWHIFFREATGHNHMAHSILTALALGASPSELERAYTDTEAIQRPIPAVDPMILTRLDADPQALESLLGWSDLYSTFLTYFQSQIDRHGWQSVVTTYVFSETPLAEKLLIKLYEGMYHSLIHLGLGIEFGQPGIIAEALAQAAAHEDGHIDKLLLGVEAAIAAKDDTRTETTVPKSLVQLVDEVRSHPRIWADLRFGDRWNRMRDSIMDRAADELIPIAAQFRIPASGMMMMAGEHADLLTIRTAEMASTAAYLAGASQSARRPRKIDFFLMHTVTASLFFSVFNAQEWIPRAMRVRLVEWKGRLDLAFYAFCKSPELDACVISDYSDDFTRDMDWAALYAAVNQEHDDGHVAKFMRALRHAERLSRPYEQHPVWAEHFPVKGNMWIKLARMALETTRHSPPDFKWIMGTGFDEAWERPDLKLAENRGQQGQSVP", - "output": "oxidoreductase activity" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MSGQTTSEYIGHHLQFLKTGDSFWNVHIDTLFFSVLAAIIFLAVFRSVAKKATSGVPGKLQCMVEILVEWINGIVKENFHGPRNVVAPLALTIFCWVFIMNAIDLIPVDFLPQLAGLFGIHYLRAVPTADISATLGMSLCVFALILFYTVKSKGFGGLVKEYTLHPFNHWSLIPVNFVLESVTLLAKPISLAFRLFGNMYAGELIFILIAVMYSANAAIAALGIPLHLAWAIFHILIVTLQAFIFMMLTVVYLSIAYNKAEH", - "output": "plasma membrane ; proton-transporting ATP synthase complex, coupling factor F(o) ; proton-transporting ATP synthase activity, rotational mechanism" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MARVKGGTVTRKRRKKVLKLAKGYYGSKHTLFKSAKEQVMNSYYYAFRDRRQKKRDFRKLWIARINAAARMNGLSYSKLMHGLKLAEIDINRKMLADLAVNDAAAFTALAEQAKDALSK", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; ribosomal large subunit assembly ; translation" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MILTVKPLQGKECNVQVTENEKVSTVKELVSERLNIPASQQRLLYKGKALADEHRLSDYSIGPEAKLNLVVRPAGERSSGAVGTSSANNDKGGSGVWQLLSTVLAKHFSPADAAKVQEQLIKDYERSLRQLSLDDIERLASRLLHPETEVMDTSYMD", - "output": "BAT3 complex ; cytosol ; nucleus ; protein-folding chaperone binding ; post-translational protein targeting to endoplasmic reticulum membrane ; tail-anchored membrane protein insertion into ER membrane" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERRVNPDDSKED", - "output": "cytoplasm ; maturation of SSU-rRNA" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MELQVVGANALTVSETTFGREFNEALIHQVVVAYAAGARQGSRAQKTRAEVSGSGKKPWRQKGTGRARSGDIKSPIWRSGGVTFAAKPQDHSQKVNKKMYRGAIKSILSELVRQDRLVVVEKFEIDVPKTKVLVQKLKDMALTDALIITASLDENLFLAARNLYKVDVRDVQAIDPVSLIAFDKVVVTVDAVKQIEEMFA", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MKEILITNDDGFEAKGLHELADALRQIPDVNVTIVAPSSEKSACAHSLTLTKPLRFIKIDDNFFKLDDATPSDCVYLALHALYQKKPDLVISGINHGANLGEDITYSGTCGAAMEGVLQGIKSIAFSQFYKNNSIEELGFSLACQIVKFIVPRVLEGEICLPQRQFLNVNIPAVAARDFKGYKVAPAGRRCYATHATLNRNPRGVEYYWLGNAALDYEEGQISDISVINDGFASLTPIQLDMTAHASLENLKKSFQ", - "output": "cytoplasm ; metal ion binding ; nucleotide binding ; XMP 5'-nucleosidase activity" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVSKKWIPELRHYAPGVPIILVGTKLDLRDDKQFFVDHPGAVPISTAQGEELRKLIGAAAYIECSSKTQQNIKAVFDAAIKVVLQPPKQKKKKKKAQKGCAIL", - "output": "cell cortex ; cell projection ; cytoplasmic vesicle ; cytoskeleton ; nucleus ; plasma membrane ; site of polarized growth ; GDP binding ; GTP binding ; GTPase activity ; protein kinase binding ; actin filament organization ; cortical cytoskeleton organization ; establishment or maintenance of cell polarity ; positive gravitropism ; regulation of actin cytoskeleton organization ; regulation of auxin mediated signaling pathway ; regulation of cell shape ; root hair elongation ; root hair initiation ; small GTPase mediated signal transduction" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTISQLYDPEKGMFLPDRFVKGTCPKCKSADQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTRSGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSDAELYHFIGKDIVYFHSLFWPAMLEGSHFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLKHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLAAELADPQLYKTFTDAAAVIGEAWESREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRVLMTYLKPVLPTLSERVEAFLNSELNWDAIEQPLLGHKVNTFKALYNRIDMKQVEALVEASKEEVKAAAAPVTGPLADFPIQETITFDDFAKIDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALIGRQTVMVANLAPRKMRFGVSEGMVMAAGPGGKDIFLLSPDDGAKPGQQVK", - "output": "cytoplasm ; ATP binding ; metal ion binding ; methionine-tRNA ligase activity ; tRNA binding ; methionyl-tRNA aminoacylation" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MKKQELNQAFTHVFGREADATFFSPGRINLIGEHTDYNGGRVFPAAITLGTYGAARKRDDKLLRFYSANFEELGIIEISLDHLIFNKKDSWTNYPKGVIKYLQEAGHSIDTGMDVYVFGNIPNGSGLSSSSSLELLIGIMAEELFDLKLDRLDLVKIGKRTENDFIGVNSGIMDQFAIGMGAEKKAIYLDTKTLEYDLVPLDLGDNVIVIMNTNKRRELADSKYNERRTECEKAVEELNVLLDIKSLGELDEETFDEYAYLIKDAKRIKRARHAVSENQRTLKAKKALAAGDLEKFGRLVNASHVSLEHDYEVTGIELDTLAHTAWEQEGVLGARMTGAGFGGCGIAIVAKDKVAALKENVGRIYTETVGYAPAFYIAEIAGGSRVLSRK", - "output": "cytoplasm ; ATP binding ; galactokinase activity ; magnesium ion binding ; galactose metabolic process" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MNNYIFIISAPSGAGKSSLLKAFLATDIGKDNYAVAISHTTREPRVGEINSREYYFVTVAEFEQLLSQDGFIEYAKVFKNYYGTSKAELDRLLALGKNIILEIDWQGAQQTRAIYGDRAKSIFILPPSLDELRKRLEKRNTDSKETIDYRMEQVQSEISHADEYDYLLVNDDFSQSLEQLCKYFEQNIQS", - "output": "cytoplasm ; ATP binding ; guanylate kinase activity ; phosphorylation" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MRIVVSGGGTGGHIYPALAMIREIERRTPCEVLYIGTENGLEADIVRRAGIPFESIEISGIRRSLSFENVKTGFRFLKSVVRVRKLLRDFQPDIVVGTGGFVCGPVLYTAAKMGYKTLVHEQNSLPGITNKFLARYVDRVALSFKGSGHHFGKNKGKTILIGNPRASEVAMLQIDPVEEKRKYGFEQDRPLIVVYGGSRGAPAINKAVVDMIPKLTETDWSLLFVTGQVHYEDIQAQLGTLPDRIQLRPFIYDLPLILKASQLVISRSGASTLAELTTLGLPSILIPSPYVTENHQEVNASSLVETGASLLIRESELTGDRLFDACTKAIADQADMSKASLALGMPNAASDLVDELLRLIQRKN", - "output": "plasma membrane ; UDP-N-acetyl-D-glucosamine:N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol 4-beta-N-acetylglucosaminlytransferase activity ; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity ; carbohydrate metabolic process ; cell cycle ; cell division ; cell wall organization ; lipid glycosylation ; peptidoglycan biosynthetic process ; regulation of cell shape" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MGSFSMWHWLIVLVIVLLLFGRGKIPELMGDVAKGIKSFKKGMTDEDAPDTAKTVDHKADETK", - "output": "TAT protein transport complex ; protein transmembrane transporter activity ; protein transport by the Tat complex" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MSNEKMDTSPPSYDSHFTLETSMHRQLKDKRIILASGSPRRKQLFEQMGFPNVETCVSGFPEDLNKSMYITPWEYAADTSVQKAIAVYEKLAAEEDSPDIVVSADTILILDSEIMEKPNDPKHHLAMLKKLRNSKTPHKVFTAVSVIVPMEVPIHPGYVMKTHLEETQVKFDPSITDEFLEAYVRCGEGSDKAGGYAIQGHGALLIESIIGDFSNVVGLPIRATFKLMEEALEQGDADNYD", - "output": "cytosol ; nucleus ; dTTP diphosphatase activity ; nucleoside triphosphate diphosphatase activity ; UTP diphosphatase activity ; cellular detoxification ; nucleobase-containing small molecule metabolic process ; nucleotide metabolic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MKMKSLREVDAEIYSLILQEKKRETNKILMIASENYASRAVMEAQGSLFTNKYAEGYPGRRYYGGCEYADEVERLAQERAKQLFNVEHVNVQPHSGTQANMAVYFAMLQPGDTIMGMSLTHGGHLSHGSPVNFTGKLYKTVFYGVNKETGYIDMDEVRRLAQEHKPKIIITGASAYPRTIDFKAFSEIAKEVGAYLMADIAHIAGLIATSMHPSPVPYSDFITTTTHKTLRGPRGGVVMCKAQYAKAIDKTVFPGIQGGPLVHVIAAKAVAFKEALSEDFKEYQKKVIKNAKTLAEALKKKGFKLVSDGTDNHLMLVDLTNFNITGKEAEEALDKAGITVNKNTIPFDTKPPTVTSGIRIGTPSVTTRGMGEEEMEKIAEIIERVIKNISNDSVIKDMQKKVQELCKKFPIY", - "output": "cytoplasm ; cytosol ; glycine hydroxymethyltransferase activity ; pyridoxal phosphate binding ; serine binding ; zinc ion binding ; folic acid metabolic process ; glycine biosynthetic process from serine ; L-serine catabolic process ; one-carbon metabolic process ; tetrahydrofolate interconversion ; tetrahydrofolate metabolic process" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MATSKSQQFQLIEGMELQITVTGLPNGSSVRAEFHLKNCTRAWILHWGCIYQGNNHWYIPSEHSSKQGALQTTFVKSGDAYVVILELRDPRVRAIEFVLKDGSHNRWLRQHNGNFRVEIPWNDLHAHHRIPKTLIERRAHKIWDRKGRPQSSAREQQIDYDNAVRELHAELARGISLDELQANSTVPVEKEETSEPHHTMIQSYRRKHDVQKWLQKYTEPINRSGSVKSSALAELSKRSVGQENLVSQKSFHVRNYEITVLQRDVKGDCRLWIATNMAGPTVLHWGVAKSSAGEWLIPPPDVLPEKSKFVHGACQTQFTDMSSREHSYQFIDINLKRGGFVGIQFVIWSGGYWVNNNGANFVVNLKSADSTSGKLDVDEKYVLKWLLDEISEREKEAERSLMHRFNIATELTERCKDEGEGGCIGIMVWMRFMATRHLTWNKNYNVKPREISEALERFTNLMEKIYLQQPNKREIVRLTMALVGRGGQGDVGQRIRDEILVIQRNNHCKSGMMEEWHQKLHNNSSADDVIICEALLNYVRSDFRIDAYWQTLQTNGLTKERLASYDRPIVSEPRFRSDSKEGLIRDLTMYLKTLKAVHSGADLESAIDTFLSPSKGHHVFAVNGLSPKLQDLLNLVKRLVREENTEPLIEKLVDARIQLHPALRAPRTRAKDLLFLDIALESCFKTTIEKRLISLNFNNPPEIIYVICVVLENLCLSIVNNEEIIFCTKDWYRVSEAYRPHDVQWALQTKAVLDRLQLVLADRCQHYFTIIQPTAKYLGQLLRVDKHGIDVFTEEVIRAGPGAVLSTLVNRFDPSLRKIANLGCWQVISSADAYGFVVCVNELIVVQNKFYSKPTVIIASKVTGEEEIPAGVVAVLTPSMIDVLSHVSIRARNSKICFATCFDQNVLSNLKSKEGRAISIHTKSTGLVISDGNNSDVSVRHIFISSVPRGVISKGKKFCGHYVISSKEFTDERVGSKSYNIKFLRERVPSWIKIPTSAALPFGTFENILSDDSNKDVARRISVLKDSLNRGDLTKLKSIQEAILQMSAPMALRNELITKLRSERMPYLGDESGWNRSWVAIKKVWASKWNERAYVSCKKNKLDHDAVCMAVLIQEVICGDYAFVIHTNNPVSGDSSEIYTEIVKGLGETLVGAYPGRAMSFITKKTNLKSPTVISYPSKRIGLYSKPSIIFRSDSNNEDLEGNAGAGLYDSVIMDEAEEVVVDYSREPLIMDKSFRVRLFSAIAEAGNVIESIYGCPQDIEGVVKGGHIYIVQARPQV", - "output": "chloroplast envelope ; ATP binding ; maltodextrin water dikinase ; metal ion binding ; starch, H2O dikinase activity ; carbohydrate metabolic process ; phosphorylation" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGPALSALDGFSIGTGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSPFLLAMLPPGAFIGLGLMLAGKYLIDERMKKRRAEAAAERALPNGETGNV", - "output": "plasma membrane ; electron transport chain" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MISFLLLIFLIQLAIYIVNTIGSSTIDDLLWILYLRLPMPISKDTRKHGELKHDVVQLKREMNATSSQDEFAKWAKLRRRHDKAMEEYEAMNRSMGSRKTSFQFSIKIARWLTLNGPRLFIQFYYTKTPVFDLPAGWFPYPVEWILSFPRAPLGSVSIQVWSSACATAISLAGDVVIAVVQRRQASNRQAQAVPAGKSEAATK", - "output": "endoplasmic reticulum membrane ; GET complex ; tail-anchored membrane protein insertion into ER membrane" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MAPSNLPPIFNATSQDIEMLLAAQCHLGSKNLQVHMDPYLWKTRPDGINVINIGKTWEKIVLAARIIAAIDNPADVCVISARPYGQRAVLKFAAHTGAAAIAGRFTPGNFTNYITRSFKEPRLIIVTDPRTDHQAIKEASYVNIPVIALCDTDSPTEFVDVAIPTNNKGRHAIGLIWWMLAREVLRLRGTIASRETEWDVVVDLYFYRDPEAEENKEIEEAKVPGAEEVGAAAIESGLVGDSWEAQVAPAFAATGAAVPAGAAPGWEAEAAGEWAASSGAAAGAAETWATDTAAPDAGVKW", - "output": "cytosolic small ribosomal subunit ; structural constituent of ribosome ; ribosomal small subunit assembly ; translation" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MTDDVALPLQFTDAAASKVKNLISDENNPDLKLRVYITGGGCSGFQYGFTFDDKVNEGDMTIEKSGVALVVDPMSLQYLVGGSVDYTEGLEGSRFIVTNPNAKTTCGCGSSFSI", - "output": "2 iron, 2 sulfur cluster binding ; iron ion binding ; iron-sulfur cluster assembly" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MPPTMLASVPTRPRSHPFRRRRGAAAAAPPLLPDQIAAAAAAAAKRPAESSTSASSCFHSEVISATSTTCPTSLAAAQRPEKRPRYQDVDEEQPAASECSEIIGGARPRAAEVEVSESSCLASVLESYLACPEQLANDAETTAYSSAREDLTLSETEEEEEEEEVRSGPCICTDCSFSPLHESSSSSDDDNAVPSPTFSLFLALAEQFVPFTHPKTPTATDVALQAGEGKRFEDLDNEVSYERFRRRERRGVVARDYIEVYSSMLGSYGRAVVEQRVVMVNWIMEHSQAMKLQPETVFMGIGLMDRFLTRGYVKGSRNLQLLGIACTTLATRIEENQPYNCILQKAFKVGINTYSRSEVVAMEWLVQEVLDFQCFVTTTHHFLWFYLKAANADDRVEDLAKYLALLSLLDHKHLSFWPSTVAAAVVALACLATNNESSCHLVMETHMRTKNDDLPECLMSLEWLTNYAS", - "output": "cyclin-dependent protein kinase holoenzyme complex ; cytoplasm ; nucleus ; cyclin-dependent protein serine/threonine kinase regulator activity ; cell division ; homologous chromosome pairing at meiosis ; homologous chromosome segregation ; mitotic cell cycle phase transition ; regulation of cyclin-dependent protein serine/threonine kinase activity" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MKYLIGIIGLIVFLGLAWIASSGKKRIKIRPIVVMLILQFILGYILLNTGIGNFLVGGFAKGFGYLLEYAAEGINFVFGGLVNADQTTFFMNVLLPIVFISALIGILQKWKVLPFIIRYIGLALSKVNGMGRLESYNAVASAILGQSEVFISLKKELGLLNQQRLYTLCASAMSTVSMSIVGAYMTMLKPEYVVTALVLNLFGGFIIASIINPYEVAKEEDMLRVEEEEKQSFFEVLGEYILDGFKVAVVVAAMLIGFVAIIALINGIFNAVFGISFQGILGYVFAPFAFLVGIPWNEAVNAGSIMATKMVSNEFVAMTSLTQNGFHFSGRTTAIVSVFLVSFANFSSIGIIAGAVKGLNEKQGNVVARFGLKLLYGATLVSFLSAAIVGLIY", - "output": "plasma membrane ; nucleoside transmembrane transporter activity ; symporter activity ; nucleoside transmembrane transport" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MVSSMKVEWYLDFVDLNYEPGRDELIVEYYFEPNGVSPEEAAGRIASESSIGTWTTLWKLPEMAKRSMAKVFYLEKHGEGYIAKIAYPLTLFEEGSLVQLFSAIAGNVFGMKALKNLRLLDFHPPYEYLRHFKGPQFGVKGIREFMGIKDRPLTATVPKPKMGWSVEEYAEIAYELWSGGIDLLKDDENFTSFPFNRFEERVKKLYRVRDRVEAETGETKEYLINITGPVNVMEKRAELVANEGGQYVMIDIVVAGWSALQYMREVTEDLGLAIHAHRAMHAAFTRNPKHGITMFALAKAARMIGVDQIHTGTAVGKMAGDYEEIKKINDFLLSKWEHIRPVFPVASGGLHPGLMPELIRLFGKDLVIQAGGGVMGHPDGPRAGAKALRDAIDAAIEGLDLEEKAKSSPELKKALDKWGYLKPK", - "output": "magnesium ion binding ; oxidoreductase activity ; ribulose-bisphosphate carboxylase activity ; AMP catabolic process ; carbon fixation" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MAIDVFYDDDADLSIIQGRKVAIIGYGSQGHAHAQNLRESGVEVVIGLREGSKSRAKAEEAGFTVKTNAEAAEWADVIMLLAPDTSQAKIFAEDIEPNLNDGDALFFGHGLNIHFKLIEPADNIIIGMVAPKGPGHLVRRQFVDGKGVPCLIAVEQDPKNNGRDLALSYAAAIGGARAGVIPTTFEAETVTDLFGEQAVLCGGTEELIKTGFEVLVEAGYEPEMAYFECLHEMKLIVDLMFEGGIANMNYSVSDTAEFGGYLSGPRVIDADTKKRMKDILTDIQDGTFTKRLVANVEGGNKELEELRASYNDHQIEKTGAKLRDLMSWVKVDARAETA", - "output": "ketol-acid reductoisomerase activity ; magnesium ion binding ; NADP binding ; isoleucine biosynthetic process ; valine biosynthetic process" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MYPAHLLVLLAVCVSLLGASDMPPQPLNLVQFSNMIQCANHGRRPTSNYMDYGCYCGKGGSGTPVDELDRCCKIHDDCYGEAEKSQKCAPYWTWYTWKCGSDGPQCDDSETGSRRFVCGYDATAAKCFAKAPYNKENYNIETRCQ", - "output": "extracellular region ; calcium ion binding ; phospholipase A2 activity ; toxin activity ; arachidonic acid secretion ; lipid catabolic process ; phospholipid metabolic process" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MADEQNLDAQAQDQAAEAGAGDELTTRVQVLEEQLAAAQDQSLRVAADLQNVRRRAEQDVEKAHKFALEKFAGDLLPIIDSLERGLDLSNPDDESIRPMREGIELTLKMFQDTLKRYQLEAIDPHGQPFSADQHQAMAMQESADVEPNTVLKVFQKGYQLNGRLLRPAMVVVSKAPSPATPSINEQA", - "output": "cytoplasm ; adenyl-nucleotide exchange factor activity ; protein homodimerization activity ; protein-folding chaperone binding ; protein folding" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MSTPSQRRSGRGGGPSGTPLSPTRITRLQEKEDLQELNDRLAVYIDKVRSLELENAGLRLRITESEEVVSREVSGIKAAYEAELADARKTLDSVAKERARLQLELSKVREEHKELKARNAKKEADLLAAQARLKDLEALLNSKEAALSTALGEKRNLENEVRDLRAQVAKLEGALSEAKKQLQDEMLRRVDAENRLQTLKEELEFQKNIYSEELRETKRRHETRLVEIDNGRQQEFESKLAEALQDLRRQHEDQIRHYRDELEKTYGAKLENAKQSAERNSSMAGAAHEELQQTHIRIDSLSAELSQLQKQLAAKEAKLREVEEALSREREGGRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEINAYRKLLEGEEERLRLSPSPSSQRGARSSGLQHSGAGSAKKRRLEDGEGREGREGRTSFSHHARTSGRVGVEEVDLEGRFVRLRNKSNEDQALGNWQVKRQNGDDPPLTYRFPPKFTLKAGQAVTIWASGAGATHSPPSDVVWKAQSSWGSGDSLRTALINSNGEEVAMRKLVRTVIINDDDEDEEDDEVSIHHRHHHSGCSGSADPAEYNLRSRTVLCGTCGQPADKGSAAAASSASSASTVTVSRGYRSSGGGIGEGLLGRSYVLGGAGPRRQAPAPQGCSIM", - "output": "intermediate filament ; nuclear envelope ; nuclear lamina ; structural constituent of cytoskeleton ; heterochromatin formation ; nuclear envelope organization ; nuclear migration ; nuclear pore localization ; protein localization to nuclear envelope" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MKIIAKKDLFINDEIRVREVRLVGLEGEQLGIKPLSEAQSLADASNVDLVLIQPQAVPPVAKLMDYGKFKFEYQKKQKEQRKKQSVVTVKEVRLSPVIDKGDFETKLRNGRKFLEKGNKVKVSIRFKGRMITHKEIGAKVLADFAEATQDIAIIEQRAKMDGRQMFMQLAPISDKK", - "output": "cytoplasm ; translation initiation factor activity" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MKIALFGGSFDPPHNGHNSVVLEALEKLDIDKLIIMPTYINPFKQSFSADEKQRFLWVKKLWGHLPKVEICDFEIRQKRPVPSIESVKYLYKLYNPSKFYLLIGADHLEKLHLWHDFEKLNSLVEFVIANRNDIGIPKNFKDLKTNKKIASSFIRDTLNTNEVCEEIKDEVKKYYEKLQKN", - "output": "ATP binding ; nicotinate-nucleotide adenylyltransferase activity ; NAD biosynthetic process" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MTEPLILQPAKPADACVIWLHGLGADRYDFMPVAEALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPARSISLEELEVSAKMVTDLIEAQKRTGIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYAPTFGDELELSASQQRIPALCLHGQYDDVVQNAMGRSAFEHLKSRGVTVTWQEYPMGHEVLPQEIHDIGAWLAARLG", - "output": "carboxylesterase activity" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MSCLPALDKFLQNYHQSYLSTLGELPRYYPRGESSLCIQGEFVEASTEAVGWLPVKREQPGSFTNVEHALELKLWPDIHSFYGQYFAAPVLFDSTWGTGELLQVWNEADFDALQQNIIGHLMMKQKLKQPPTWFIGLLDEGDKMLTVDNADGSVWIEIPGELPSVQLATSLAEFIAALSPRIAPPVKHEELPMPAQDHPGIFASFKRMWHNLTGKR", - "output": "cytoplasmic side of plasma membrane" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MYGIEYTTILTILISIILLNYILKTITNTMDYIIFRFLLLIALISPFVRTQNYGMYLPITGSLDAVYTNSTSGEPFLTSTLCLYYPAEAKNEISDDEWENTLSQLFLTKGWPIGSVYFKDYNDINTFSVNPQLYCDYNVVLMRYDNTSELDASELADLILNEWLCNPMDISLYYYQQSSESNKWISMGTDCTVKVCPLNTQTLGIGCKTTDVNTFEIVASSEKLVITDVVNGVNHNINISINTCTIRNCNKLGPRENVAIIQVGGPNALDITADPTTVPQVQRIMRINWKKWWQVFYTVVDYINQVIQVMSKRSRSLDAAAFYYRI", - "output": "host cell endoplasmic reticulum lumen ; T=13 icosahedral viral capsid ; viral outer capsid ; metal ion binding" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MSAQPVDIQIFGRSLRVNCPPEQQDALNMAAVDLNERLQDLKVRTRVTNTEQLVFIAALNVCHELAQERLKTRDYASNMEQRIRMLQQTIEQALLEQGRISERQDAQFE", - "output": "cytoplasm ; plasma membrane ; division septum assembly" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MKKTLIIAEAGVNHNGDLNLAKKLIEIAADSGADFVKFQSFKAKNCISTKAKKAPYQLKTTANDESQLQMVQKLELDLKAHKELILHAKKCNIAFLSTPFDLESVDLLNELGLKIFKIPSGEITNLPYLKKIAKLNKKIILSTGMANLGEIEEALNVLCKNGAKRQNITLLHCTTEYPAPFNEVNLKAMQSLKDAFKLDVGYSDHTRGIHISLAAVALGACVIEKHFTLDKNMSGPDHKASLEPQELKMLCTQIRQIQKAMGDGIKKASKSEQKNINIVRKSLVAKKDIKKGEIFSEGNLTTKRPANGISAMRYEEFLGKIATKNYKEDELIRE", - "output": "lyase activity ; transferase activity, transferring alkyl or aryl (other than methyl) groups ; bacterial-type flagellum organization ; carbohydrate biosynthetic process" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MILVFDVGNTNIVLGVYRGKELIENWRIATDKDKSSDEYAMVIHQFFHYNGLNIHDVDDVIISSVVPNIMYSLENASRKLFKREPLIVGSGIKTGMNIKYDDPKQVGADRIVNAIAAYEKYGGPLIIVDFGTATTFCAVSEDGEYLGGAISPGIKISSEALFEKAAKLPRVELINPKKVICKNTVSSMQAGIVYGYIGLVENIVRNMKKELKSSSCKVIATGGLSTLIAGGTDSIDVVDKFLSLDGLNIIYERNRKDRILSNKKS", - "output": "cytoplasm ; ATP binding ; metal ion binding ; pantothenate kinase activity ; coenzyme A biosynthetic process ; phosphorylation" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MNKNVVIKSLAALTILTSVTGIGTTLVEEVQQTAKAENNVTKVKDTNIFPYTGVVAFKSATGFVVGKNTILTNKHVSKNYKVGDRITAHPNSDKGNGGIYSIKKIINYPGKEDVSVIQVEERAIERGPKGFNFNDNVTPFKYAAGAKAGERIKVIGYPHPYKNKYVLYESTGPVMSVEGSSIVYSAHTESGNSGSPVLNSNNELVGIHFASDVKNDDNRNAYGVYFTPEIKKFIAENIDK", - "output": "extracellular region ; serine-type endopeptidase activity ; proteolysis" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MEPCLLMWGILTFITVSGYTTDLCDDDPPNLKHATFKALTYKTGTVLNCDCERGFRRISSYMHCTGNSSHASWENKCRCKSVSPENRKGKVTTKPEEQKGENPTEMQSQTPPMDEVDLVGHCREPPPWEHENSKRIYHFVVGQTLHYQCMQGFTALHRGPAKSICKTIFGKTRWTQPPLKCISESQFPDDEELQASTDAPAGRDTSSPFITTSTPDFHKHTEVATTMESFIFTTEYQIAVASCVLLLISIVLLSGLTWQRRRRKSRTI", - "output": "membrane ; interleukin-2 binding ; interleukin-2 receptor activity ; immune system process ; inflammatory response" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MSRVAKAPVVLLAGVEVKLNGQEITVKGPKGELALVAHNAVVLTQEENTITFGPREGFDKAWAQAGTVRALVNNMVVGVTEGFTKKLTLKGVGYRANVAGNTVNLTLGFSHPVAHELPTGVKAECPSQTEIVLTGTDKQVIGQVAADIRAYRSPEPYKGKGVRYADEVVRTKEAKKK", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYHIEPVPGEEDQYICYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPTYSKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRACYECLRGGLDFTKDDENVNSQPFMRWRDRFVFCAEAIYKAQAETGEIKGHYLNATAGTCEEMMKRAAFARELGVPIVMHDYLTGGFTANTSLSMYCRDNGLLLHIHRAMHAVIDRQKNHGIHFRVLAKALRMSGGDHVHSGTVVGKLEGEREITLGFVDLLRDDFIEKDRSRGVFFTQDWVSMPGVIPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLAREGNEIIKAACKWSPELAAACEVWKAIKFEFEPVDTVDKV", - "output": "chloroplast ; magnesium ion binding ; monooxygenase activity ; ribulose-bisphosphate carboxylase activity ; photorespiration ; reductive pentose-phosphate cycle" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MKQSVSAEQIELKSSLPGSKKVYVDGPREGMKVPMREIEQSDTNGVPNPPIRVYDTSGPYTDPAYKVELEKGIPTPRHSWILERGDVEAYEGREVKPEDDGVKVASKHTPVFPQMDRKPLRAKQGANVTQMHYARNGIITSEMEYVAIREGVDPEFVRKEIAEGRAILPANINHPEAELMIIGRNFHVKVNANIGNSAVSSSIAEEVEKMTWATRWGADTIMDLSTGKNIHTTREWIIRNAPVPVGTVPIYQALEKVNGIAEDLTWEVYRDTLIEQAEQGVDYFTIHAGVLLRYIPITAKRTTGIVSRGGSIMAQWCLFHHKENFLYTHFEEICEIMKQYDVSFSLGDGLRPGSIADANDEAQFSELETLGELTKIAWKHDVQVMIEGPGHVPMHLIKENMEKELDICQGAPFYTLGPLTTDIAPGYDHITSAIGAAMIGWFGTAMLCYVTPKEHLGLPNKDDVREGVITYKIAAHAADLAKGHKTAHQRDDALSKARFEFRWRDQFNLSLDPERAMEYHDETLPAEGAKTAHFCSMCGPKFCSMRISHDIREYAKENDLETTEAIEKGMKEKAKEFKETGSHLYQ", - "output": "4 iron, 4 sulfur cluster binding ; carbon-carbon lyase activity ; zinc ion binding ; thiamine biosynthetic process ; thiamine diphosphate biosynthetic process" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MTNLRKTHPLMKIVNSSFIDLPAPSNISSWWNFGSLLGVCLIIQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWLIRYLHANGASMFFICLFLHVGRGLYYGSYMFLKTWNIGVLLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGSDLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAGVHLPFLHETGSNNPSGLSSDADKIPFHPYYTIKDILGVLLLILALTSLVLFSPDLLGDPDKYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILAEVPFLHTSKQRSMMFRPFSQCLFWILVADLLTLTWMGGQPVEHPFIIMGQLASILYFLLILVMMPITSLFENNLLKW", - "output": "mitochondrial inner membrane ; respiratory chain complex III ; metal ion binding ; ubiquinol-cytochrome-c reductase activity ; respiratory electron transport chain" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MKIAIFDSGIGGLSLLNEALKRFRGVEFIYFADNKNAPYGTKSKDEIIRLCLNCVQFLTNLSVDMIVIACNTATSAAITELRSSFSVPIIGMEPAVKLGVNAGGDILVVATPATISGNKLSDLIHKVNLESKTHLLALPKLVEFAQNMEFDSLEVLKYLKDEISKFDLSNISLLVLGCTHFNYFKDSFRAILPNKTGIIDGVNGTINQMIRRLGGVSEFGDKNSIRYISSTENLNVKKIEPYLKRLDIMREIN", - "output": "glutamate racemase activity ; cell wall organization ; peptidoglycan biosynthetic process ; regulation of cell shape" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MKKAIIGRKVGMTQIFDEKGKVIPVTVVEAGPCVVVQKKTLENDGYEAIQVGFDEIREKLANKPRKGHFAKAGATLRRTLKEFRLDDISQYEVGNEIKADVFGAGDKVDVSAVSKGKGFQGSIKRWNQQRGPMTHGSKFHRAPGSMGASSDPSRTFKNKRMPGHMGSVNTTVLNLEVVKVIAEKNLILIKGGIPGPNKGTVVIKDTVRA", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MSENIGKIVQVIGAVVDVSFPNGKLPPILTALEIHNPNSIDAPKLICEVAQHLGDDIVRTIAMDATEGLKRGMDVLDTGHPIMAPVGKASLGRIMNVVGQPIDGLGVIDTKTYLPIHRKPPSFLDQNTSVEPLETGIKVIDLLVPFPKGGKMGLFGGAGVGKTVILMEMINNIARQHGGISVFAGVGERTREGNDLYHEMKEAGVLEKAILVYGQMNEPPGARSRVALTALTCAEYFRDEEHQDVLLFIDNIFRFIQAGSEVSALLGRMPSAVGYQPTLGTDLGSLEERITSTHNGSITSVQAVYVPADDLTDPAPATTFSHLDGTLVLSRQIAELGIYPAVDPLDSTSRILEPNFVGEEHYTVARGVQKILQKYKELQDIIAILGMDELSDEDKLVVSRARRIQRFLSQPFHVAETFTGTAGEYVKLEDTIKGFKGILAGEYDHLSESDFYMVGNIDSAVAKYEKRKESK", - "output": "plasma membrane ; proton-transporting ATP synthase complex, catalytic core F(1) ; ATP binding ; proton-transporting ATP synthase activity, rotational mechanism ; proton-transporting ATPase activity, rotational mechanism" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MTHQAAEVAKRRTFAIISHPDAGKTTITEKLLLMGKAIAVAGTVKSRKSDRHATSDWMEMEKQRGISITTSVMQFPYRDHMVNLLDTPGHEDFSEDTYRTLTAVDSALMVLDGGKGVEPRTIALMDVCRLRDTPIVSFINKLDRDIRDPIELLDEIEAVLKIKAAPITWPIGCYRDFKGVYHLADDYIIVYTAGHGHERTDVKIIEKLDSDEARAHLGDEYDRFVDQLELVQGACHAFNQQEFLDGQLTPVFFGTALGNFGVDHVLDAVVDWAPRPLPRVANERTVEPVEEKFSGFVFKIQANMDPKHRDRIAFMRICSGKYDKGMKMRHVRTGKDVRIGDALTFFSSEREQLEEAFAGDIIGLHNHGTIQIGDTFTEGESLSFTGIPHFAPELFRRVRLRDPLKSKQLRQGLQQLAEEGATQVFFPERSNDIILGAVGVLQFDVVASRLKEEYKVECSYEPITVYSARWIDCSDKKKLEEFSNKAVENLAVDGGGHLTYLAPTRVNLALMEERWPDVKFRATREHH", - "output": "cytoplasm ; GTP binding ; GTPase activity ; guanosine tetraphosphate binding ; translation release factor activity, codon specific ; regulation of translational termination" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MSLMVISMACVAFFLLQGAWPHEGFRRKPSLLAHPGPLVKSEETVILQCWSDVMFEHFLLHREGTFNHTLRLIGEHIDGVSKGNFSIGRMTQDLAGTYRCYGSVTHSPYQLSAPSDPLDIVITGLYEKPSLSAQPGPTVLAGESVTLSCSSRSSYDMYHLSREGEAHERRLPAGPKVNRTFQADFPLDPATHGGTYRCFGSFRDSPYEWSKSSDPLLVSVTGNSSNSWPSPTEPSSETGNPRHLHVLIGTSVVKLPFTILLFFLLHRWCSNKKNASVMDQGPAGNRTVNREDSDEQDHQEVSYA", - "output": "membrane ; plasma membrane ; HLA-C specific inhibitory MHC class I receptor activity ; immune response" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MIQHMTRLKVADNTGAKEVGVIKVLGGSKKRYASVGDIVVVSVKKATPAGLIAKGQMAKAVIVRTKKSIRRESGLLIRFDENACVLIKEDKTPRGSRIFGPVAREIRDRGYTKIASLAPEVL", - "output": "large ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MQKRAIYPGTFDPITNGHIDIVTRATQMFDHVILAIAASPSKKPMFTLEERVALAQQATAHLGNVEVMGFSDLMANFARIQQANILIRGLRAVADFEYEMQLAHMNRHLMPQLESVFLMPSKEWSFISSSLVKEVARHQGDVTHFLPENVHQALMDKLK", - "output": "cytoplasm ; ATP binding ; pantetheine-phosphate adenylyltransferase activity ; coenzyme A biosynthetic process" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MKLPEALGSIHFVGIGGIGMSGIAEVLNNLGYTVQGSDVAENANVKRLRENGIAVTVGHKAENIDGAEVVVVSSAIKRDNPELLAARAKRLPVVRRAEMLAELMRLKSCVAIAGTHGKTTTTSLVATLLDKGGFDPTVINGGIINAYGTNARLGAGDWMVVEADESDGTFLKLPAEVAIITNIDPEHLDHFKTFDKVQEAFRTFVENVPFYGFAVMCIDHPVVQALVGRIEDRRIITYGENPQADVRLVDVDLRGGITRFGVVFRDRAGTAEHRIDGLKLPMPGKHNALNATAAIAVARELRVPDDRIIEAIGGFGGVKRRFTRTGEWKGATIFDDYGHHPVEISAVLRAARAATEGQVIAVVQPHRYTRLASLFDEFCTCFNDADHVIVAPVYAAGESPVPGADSEHLVQGLRARGHRSVTALKGPEELAGLVAGLAKPGDFVICLGAGTITQWAYALPGELEKLG", - "output": "cytoplasm ; ATP binding ; UDP-N-acetylmuramate-L-alanine ligase activity ; cell cycle ; cell division ; cell wall organization ; peptidoglycan biosynthetic process ; regulation of cell shape" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MLKQRTIKQIVKTVGIGLHSGRKVELTLRPAAPDTGIVFSRVDLATPVDIPASAMAIGDTRMASVLQKDGARVSTIEHLMSACAGLGIDNLYIDVTAEEIPIMDGSAGSFVFLIQSAGIEEQNAAKKFIKVTKPVEIRDGDKFARLDPYFGFKLKFTIDFRHPAVDKTGQALEVDFANTSYVREIARARTFGFAHEVEMMRELGLARGGSMDNAIVLDEYRILNNDGLRYDDEFVKHKMLDAIGDLYVIGHPLLAAYDAYKSGHGLNNALLRELLAHEDSYEIVTFDDTQKAPRGFAYETQTAFA", - "output": "metal ion binding ; UDP-3-O- N-acetylglucosamine deacetylase activity ; UDP-3-O-acyl-N-acetylglucosamine deacetylase activity ; lipid A biosynthetic process" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MATPHINAEMGDFADVVLMPGDPLRAKYIAETFLEDAREVNNVRGMLGFTGTYKGRKISVMGHGMGIPSCSIYTKELITDFGVKKIIRVGSCGAVLPHVKLRDVVIGMGACTDSKVNRIRFKDHDFAAIADFDMVRNAVDAAKALGIDARVGNLFSADLFYSPDGEMFDVMEKYGILGVEMEAAGIYGVAAEFGAKALTICTVSDHIRTHEQTTAAERQTTFNDMIKIALESVLLGDKE", - "output": "purine-nucleoside phosphorylase activity ; nucleoside catabolic process ; purine nucleoside metabolic process" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MQAKVHVKKGDTVLVASGKYKGRVGKVKAVLPRKMAVIVEGVNLVKKAVRPSPKHPQGGFVEQEAPLHASKVRPICPACGKPTRVRKKFLEDGRKIRACAKCGGSLDVEE", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MTKSYNYKLTHFVTSAPDIRHLPVDSGIEIAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTRLINLFEVESGIRLVDLPGYGYAEVPEELKRKWQRALGEYLQMRDSLKGLVVLMDIRHPMKDLDQQMVQWAVDVNIPVLVLLTKADKLASGSRKEQLNQVREAALAFMGDVQVETFSSLKKQGVDKLRQKLDDWFAAIPPAQGSPETE", - "output": "GTP binding ; metal ion binding ; division septum assembly" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MGRFSNADGPGDDADEREVTPALTVGEGDIDASLRPRSLGEFIGQPRVREQLQLVLEGAKNRGGTPDHILLSGPPGLGKTSLAMIIAAELGSSLRVTSGPALERAGDLAAMLSNLIEGDVLFIDEIHRIARPAEEMLYLAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHMDFYEPAELERVLARSAGILGIELGAEAGAEIARRSRGTPRIANRLLRRVRDYAEVRADGVITRDIAKYALEVYDVDELGLDRLDRAVLSALTRSFGGGPVGVSTLAVAVGEEATTVEEVCEPFLVRAGMIARTPRGRVATAQAWKHLGMTPPAGAGGLGQVGLFE", - "output": "cytoplasm ; ATP binding ; ATP hydrolysis activity ; DNA binding ; four-way junction helicase activity ; DNA recombination ; DNA repair ; SOS response" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MSSDRPIVLAAIIGAHGLQGEVRLKLFTEDMGAYRTLDGAGRSFTLKTIRPGPNGAVARFAEIGDRNAAEALRGTELSVPRSALPPLAPGEYYHVDLIGLPCLVDGAPVGVAAMVEDFGAGDVLEIEKPDGKRFMVPVAKAVTIEPDRLLIDPEFVE", - "output": "cytoplasm ; ribosome ; ribosome binding ; ribosomal small subunit biogenesis ; rRNA processing" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MKTANHPDTVLIVDFGSQFTQLIARRIREAGVFSEIVPFQSAEAAFKRINPKAVILSGGPASTSDIGSPRAPQIVFDAGVPVLGICYGQMAMCVQMGGVAESSNHREFGRAFVEIEKDSPLFEGLWATGQRHQVWMSHGDRVIALPPGFQVFGKSESSPFAIFGNVERKMYGIMFHPEVVHTPDGARLLRNFVHNIAGIEGDWTMRAYREHAVEAIRKQVGKGKVICALSGGVDSSVAALLIHEAVGDQLTCILVDHGLMRKDEAAGVVAMFRQHYNLPLILVDASEKFISALEGEVDPEKKRKTIGRLFIEVFEEEAKKLGGADFLAQGTLYPDVIESVSFTGGPSVTIKSHHNVGGLPERMNMQLVEPLRELFKDEVRALGKELGLPESFIGRHPFPGPGLAIRCPGGITREKLEILREADAIYLDEIRKAGLYDAIWQAFAVLLPVQTVGVMGDGRTYEFVCALRAVTSVDGMTADFYHYDMAFLGAAATRIINEVRGINRVVYDVTSKPPGTIEWE", - "output": "ATP binding ; GMP synthase activity ; glutamine metabolic process" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MQLIDGKSLAHKVQENVAKEVEELKQVKNIVPGLAVLLIGDDPASHAYVNMKAKACERVGFYSITHNMPDTISQDEIIATIEMMNANPRIDGILVQLPLPKHIDTNKILEVIDPKKDVDGFHAYNVGRLVTGLDSFVACTPLGVMKMFEEYEIDLEGKDVCVVGASNIVGKPMASLLLNANATVTITHIFTKDLKAHTSQADIVVVGVGVPGLIKEDMVKEGAIVIDIGINRIEDGSLVGDVDFKNVAPKCSYITPVPGGVGPMTIAMLLSNTLKSAKQRA", - "output": "methenyltetrahydrofolate cyclohydrolase activity ; methylenetetrahydrofolate dehydrogenase (NADP+) activity ; histidine biosynthetic process ; methionine biosynthetic process ; purine nucleotide biosynthetic process ; tetrahydrofolate interconversion" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MEEKYLPELMAEKDSLDPSFTHALRLVNREIEKFQKGEAKDEEKYIDVVINKNMKLGQKVLIPVKQFPKFNFVGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKAKEEELRKSGEAKYFHLNDDLHVLIEVFAPPAEAYARMGHALEDIKKFLIPDYNDEIRQAQLQELTYLNGGSENADVPVVRGKSTLRTRGVTTPAITRGRGGVTARPVAVGVPRGTPTPRGVLSTRGPVSRGRGLLTPRARGVPPTGYRPPPPPPTQETYGEYDYDDGYSTAYDDQSYDSYDNSYSTPAQSGADYYDYGHGLGEEAYDSYGQEDWTNSRHKAPSARTAKGVYREQPYGRY", - "output": "nucleoplasm ; nucleus ; protein-containing complex ; identical protein binding ; mRNA binding ; protein domain specific binding ; RNA binding ; SH3 domain binding ; single-stranded RNA binding ; mRNA processing ; positive regulation of RNA splicing ; regulation of alternative mRNA splicing, via spliceosome ; regulation of mRNA splicing, via spliceosome ; spermatogenesis" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MILEHVLVLSSFLFSIGIYGLITSRNMIRALMSLELMLNGVNLNFVTFSDFFDSRQLKGDIFSIFVIAIAAAEAAIGPAILSSIYRNKKSIRINQSNLLNK", - "output": "chloroplast thylakoid membrane ; oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor ; quinone binding ; ATP synthesis coupled electron transport ; photosynthesis, light reaction" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MGITVLKNEGLDFHARISTPLSEIDDDIQKELLDLTKKVKIAGFRAGKVPVSIVKKKYGTSVRNDIIERRINHSVNHVIKEHNLNIIGRPKIEELQNESDKALEFTVKIELLPKITIPDLKKISLDRPKLEVNSKDVEEQLEKLAALTKNYTKESKAKIKDGDQVTIDAIGYIKEKAFEDGKLNDFKVIIGSNALIPGFEKQLIGSKTGSEVDVNVTFPENYHAKDLAGKDARFVVQIKAVHTAEPTVIDDEFAKKFQSNSLEELRTHFTKQIENESEEAINTIMKMNLFDKLEKLLDFDVPESLLEQEKNILKSGTDKNEQDESLLKDKSSKEITAYYNKLALRRVRIGLLLAEYAKSKNLQLEPDDLRKVIMQQARNFPGQENMIFDFYKNNPRAIEGLKGPALEDKAVQYIFNHEIKLKEKKYTKEELEKYLEAEEQRITLV", - "output": "cytoplasm ; peptidyl-prolyl cis-trans isomerase activity ; cell cycle ; cell division ; protein folding ; protein transport" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MGLARATAGLGPCCPPAPALLGAGLRWGGFLFAWILVSFSCHLASTQGAPEDVDVLQRLGLSWTKAGGGRSPAPPGVIPFPSGFIFTQRAKLQAPTTNVLPTTLGRELALVLSLCSHRVNHAFLFAIRSRKHRLQLGLQFLPGRTLVHLGPRQSVAFDLDVHDGRWHHLALELRGRTVTLVTACGQHRVPVPLPSRRDSMLDPQGSFLLGKMNPRAVQFEGALCQFSIHPVAQVAHNYCAHLRERCRQVDTYGPQVGALFPWDSGPAFALHPEPALLGLGNLTRNPATLGSRPISRGLMVTMAPAVPTKPLRMVHQDVSKLGSSQTPLVPAKQSARKTPSPFPSAALANSTRVFHSAPAQPRQITATSPTKRPPTKPSVSSLSVTPMKSPQAIQKAGTPSFSRPIPTTQKPTPLTSHPSPSKVSSATVRPVQKTFMTPQPPTLSPQALHPITGLPKKFTIPTVAKPQSKMTSWASKPVLARTNVPKALEQTVVAQSSVSYLGSQTLATALPPLGVGNSRMMPSTRDSTSTPAGSKKITGLEASKKTRHKSSPRKPIPLSSGKTARDASPRDLTTKPSQLSTPALVLAPAHLLSSSPQPTSSSFSFFHLPEPTPFLMLMGPPGSKGDCGLPGPPGLPGLPGSPGPRGPRGPPGPFGNPGLPGPPGAKGQKGDPGLSPGQAHDGAKGNMGLPGLAGNPGPMGRKGHKGHPGAAGHPGEQGQPGPEGSPGAKGYPGRQGFPGPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGIPGKRGEMGRPGFPGDFGERGPPGLDGNPGEIGLPGPPGVLGLLGDMGALGPVGYPGPKGMKGLMGGVGEPGLKGDKGEQGVPGVSGDPGFQGDKGSHGLPGFPGARGKPGPMGKAGDKGSLGLPGPPGPEGFPGDIGPPGDNGPEGMKGKPGARGLPGPPGQLGPEGDEGPMGPPGVPGLEGQPGRKGFPGRPGLDGSKGEPGDPGRPGPVGEQGLMGFVGLVGEPGIVGEKGDRGVMGPPGAPGPKGSMGHPGTPGGVGDPGEPGPWGPPGSRGLPGMRGAKGHRGPRGPDGPAGEQGSKGLKGRVGPRGRPGQPGQQGAAGERGHSGAKGFLGIPGPSGPPGAKGLPGEPGSQGPQGPVGPPGEMGPKGPPGAVGEPGLPGDSGMKGDLGPLGPPGEQGLIGQRGEPGLEGDLGPVGPDGLKGDRGDPGPDGEHGEKGQEGLKGEEGLPGPPGITGVRGREGKPGSQGEKGQRGAKGAKGYQGQLGEMGIPGDPGPPGTPGPKGSRGTLGPMGAPGRMGAQGEPGLAGYNGHKGITGPLGPPGPKGEKGEQGEDGKTEGAPGPPGERGPVGDRGDRGEPGDPGYPGQEGVQGLRGEPGQQGQPGHPGPRGRPGPKGSKGEEGPKGKPGKAGASGRRGTQGLQGLPGPRGVVGRQGPEGMAGQDGNPGRDGRPGYQGEQGNDGDPGPVGPAGRRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRGTEGGTGLPGNQGEPGSKGQPGDSGEMGFPGVAGLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGIIGPPGMLGPSGLPGPKGDRGSRGDWGLQGPRGPPGPRGRPGPPGPPWHPVQFQQDDLEAAFQTWMDAHGAVRLEQGYSYPDQLMLDQGGEIFKTLHYLSNLIQSIKTPLGTKENPARVCRDLMDCEQKMADGIYWVDPNLGCSSDTIEVSCNFTHGGQTCLKPITASKAEFAVSRVQMNFLHLLSSEGTQHITIHCLNMTVWQEGPARPSARQAVRFRAWNGQVFEAGGQFRPEVSMDGCKVHDGRWHQTLFTFRTQDPQQLPIVSVDNLPPVSSGKQYRLEVGPACFL", - "output": "collagen trimer ; extracellular matrix ; extracellular space ; fibrillar collagen trimer ; extracellular matrix structural constituent ; metal ion binding ; collagen fibril organization ; extracellular matrix organization ; growth plate cartilage chondrocyte development ; notochord development ; skeletal system development" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MGKGSMTAHATPNEPDYPPPPGGPPPPADIGRLLLRCHDRPGIIAAVSTFLARAGANIISLDQHSTAPEGGTFLQRAIFHLPGLTAAVDELQRDFGSTVADKFGIDYRFAEAAKPKRVAIMASTEDHCLLDLLWRNRRGELEMSVVMVIANHPDLAAHVRPFGVPFIHIPATRDTRTEAEQRQLQLLSGNVDLVVLARYMQILSPGFLEAIGCPLINIHHSFLPAFTGAAPYQRARERGVKLIGATAHYVTEVLDEGPIIEQDVVRVDHTHTVDDLVRVGADVERAVLSRAVLWHCQDRVIVHHNQTIVF", - "output": "formyltetrahydrofolate deformylase activity ; 'de novo' IMP biosynthetic process ; one-carbon metabolic process" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MEQKQMQENSYDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSIRVTDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGGLHGVGASVVNALSTELEVFVHREGKIHYQKYERGIPVADLKVIGDTDQTGTITRFKPDPEIFQETTVYEFDTLATRMRELAFLNRNIKLTIEDKREHKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVSLQYNEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIVEKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGGDFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRQIIEHGYIYIAQPPLFKVQQGKKIQYAYNEKELEKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPRRNFIQENAKYVKNLDI", - "output": "chromosome ; cytoplasm ; ATP binding ; DNA binding ; DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity ; metal ion binding ; DNA topological change ; DNA-templated DNA replication" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MKYNAGTFDVIVVGAGHAGCEAALAAARMGAKTLMLTMTLDSIAMMPCNPSIGGTGKGHLVREIDAIGGEMGINTDKTFIQSRMLNTGKGPAVHSLRAQADKNKYHTEMKKTIENEPNLLLKQAEVVDLIIEDNTVKGVVTRSGASFYSHSVILATGVYLRGKIYIGEVNYESGPNGLFPSMHLSEKLTKLGCNMRRFKTGTPARIHQDSVDFSKMEEHLGDEEIVPFSFMNDGIEKKQVPCWLTRTTGETHRVIMENLNRSAMYRGDMESVGPRYCPSIEDKVVRFSDKPSHQIFIEPEGLDTKEMYVQGMSTSLPEEVQDAMLKTVIGLESAVIMRPAYAIEYDCIDPTQLKPTLEVKHIENLFSGGQFNGTSGYEEAAAQGLMAGINAVLKTKGEEPFVLDRSEAYIGVLIDDLVTKGTNEPYRMMTSRAEYRLILRQDNADMRLTEKSYKIGLASKERLERYLLKKSHIEEEITRLKKTNVSPEKANPILEENKSSLIKAGMSLYDLLKRPEVTYKVLKKIDENRNVDIVRDAQEQCEIIIKYEGYIEKQLRQIDQFKKLENKILPQEIDYHGIDGLRLEARQKLSDIQPMSVGQASRISGVSPSDISVLMIYLEQRRRQKNGGGT", - "output": "cytoplasm ; flavin adenine dinucleotide binding ; tRNA wobble uridine modification" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MIEFDNLTYLHGKPQGTGLLKANPEDFVVVEDLGFEPDGEGEHILVRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDLSAFQLEGCQVLEYARHKRKLRLGALKGNAFTLVLREVSNRDDVEQRLNDICVKGVPNYFGAQRFGIGGSNLQGAQRWAQTNTPVRDRNKRSFWLSAARSALFNQIVAERLKKADVNQVVDGDALQLAGRGSWFVATTEELAELQRRVNDKELMITAALPGSGEWGTQREALAFEQAAVAAETELQALLVREKVEAARRAMLLYPQQLSWNWWDDVTVEIRFWLPAGSFATSVVRELINTTGDYAHIAE", - "output": "RNA binding ; tRNA pseudouridine synthase activity ; tRNA pseudouridine synthesis" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MEPLSLTVYDRNIWHLFKKEEGAPQAMFPTNIKYIFEDDDDVADVDDLVFQQQQPDSELENVIIVEIDGAGQLENVELISDQYEMLSYRRERPVSLASQRSLSWLTSGNDTGGDAGKKSGDISDPAAGPDVPREAPLSIELELVSEFKDYRNLNLEDLKLDELTRIFCIQNKQLQMISDALN", - "output": "Atg1/ULK1 kinase complex ; microtubule ; phagophore assembly site ; autophagy of mitochondrion ; chromosome segregation ; karyogamy ; late nucleophagy ; piecemeal microautophagy of the nucleus ; protein transport" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MRVINLGRQDYLNIWDKMKTFTNTRDKNTKDELWIVEHNPVFTQGVSSKPEHILSNTDIPIVQTDRGGQVTYHGPGQVIIYCLFDLKRLGMGVKRIIEIIENSIIDLLRTYTIKAHLKSGAPGVYIDNAKIAALGLRIKQSRIYHGLSLNIDMDLSPFIQINPCGYQNLKVTQLCDLTDSRDTLNIIAKKLSQILINYVSRNRH", - "output": "cytoplasm ; lipoyl(octanoyl) transferase activity ; protein lipoylation" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MGIATFAVVDLETTGNQLDYDEIIQIGITFVRQNQVIDTYHSMIRTDLEIPPFIQALTSIEEEMLVQAPYFNEVADDIYQLIKDCVFVAHNISFDLNFIKKAFEKCNIQFKPKRVMDTLELFKIAFPTDKSYQLSALAESHHIPLNNAHRADEDATTTAKLMIKAFEKFEQLHLDTQKQLYYLSKNLKYDLYHILFEMVRNYQTKPPNNQFEQFEQIIYRKQIDLKKPAVNFDGTLKDLYKNVTQSLNLTYRPQQLYLAEIILDQLMHSDKAMIEAPLGSGKSLAYLLAATMYNIETGRHVMISTNTKLLQSQLLEKDIPLLNDVLDFKINASLIKSKNDYISLGLISQILKDDTNNYEVSILKMQLLIWITETNTGDIQELNLKGGQKMYVDQKIETYVPVRHDIHYYNYIKRNAQNIQIGITNHAHLIHSDSENTIYQLFDDCIIDEAHRLPDYALNQVTNDLNYSDVKYQLGLIGKNENEKLLKAVDKLEQQRILEKLDIAPIDVFGLKININELHDLNEQLFTTIYNIIQTSDVYDDDIHKYHYVYDFETGEILKDLRAIIDKLNKTIEIFNGMNHKTIKSVRKQLLYLHDKFKLIEQSIKDHHTSFISIKNLAQKSTIRLLVKDYDVKDILTKQVLEKFKSLTFISGTLTFNHSFKAFQNWFNEDIDFNTFEISTPLTSSNHTNVFVPNDVETYNYKNLDDYVASIVDYIVEYITVTQSKCLVLFTSYKMMHMVQDLLNELPELEDYVILTQQQNQNYKIVQQFNNFDKSILLGTSTFFEGFDFQANGLKCVMIAKLPFMNKHNIKYWLMDSEFTSTFKDYVLPDAVTRFRQGLGRLIRHEDDKGLIVSFDDRLVNSTYKSFFAQSLEHFKQRKGNIKQFNKLLNQIQRSIDNESKS", - "output": "3'-5' exonuclease activity ; ATP binding ; DNA binding ; DNA-directed DNA polymerase activity ; helicase activity ; hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides ; DNA replication" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MKEFIIKANKAVTNGEINLKDLPGSSGRLDLLCRCVNSAFFLSHDMRRDTIFYSVNYGSPNPPVALKFVGSELKRVSPDERSIALFIKKALEKDASDLWKESTSGIYSSKREFRDIISEKKSEGKRIFYLHLNGKPLEDFEFKDDEDFLFVLGDHIGIGDEDEEFLEELGAEKISLSPLELHADHCIILVHNILDRLK", - "output": "cytoplasm ; S-adenosylmethionine-dependent methyltransferase activity ; tRNA methyltransferase activity" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MNNAFKDALKAGRPQIGLWLGLCSSYSAELLAGAGFDWLLIDGEHAPNNVPTVLTQLQAIAPYPSQPVVRPSWNDPVQIKQLLDVGAQTLLVPMVQNAEEARLAVRATRYPPAGIRGVGSALARASRWNRVPDYIHQANDAMCVLVQIETREALKNLPQILDVDGVDGVFIGPADLSADMGHGGNPQHPEVQAAIEDAIQQIRQAGKAPGILMANEQLAKRYLELGALFVAVGVDTTLLARGAEALAARFTHNATTTTDNNKSVY", - "output": "2,4-dihydroxyhept-2-ene-1,7-dioate aldolase activity ; 4-hydroxy-2-ketopimelate aldolase activity ; metal ion binding ; phenylacetate catabolic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MPTINQLIAQPRKAQKARNKVPALNACPQKRGVCTRVYTTTPKKPNSALRKVAKVRLTNGFEVIGYIPGEGHNLQEHSVVMIRGGRVKDLPGVRYHILRGVLDTQGVKNRKQRRSKYGAKRPK", - "output": "small ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; tRNA binding ; translation" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "IGMVVECKDGYLMGPDGCKRGCLTRPARYCPNECSRLKGKDGYCYLWLACYCYNMPESAPVWERATNRCGKGK", - "output": "extracellular region ; sodium channel inhibitor activity ; toxin activity" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MPDIAPSSQPEGDLRYRRVILKLSGESLAESGKRGISDNELLAIAKQIKSAHESGCQIAIVNGGGNILRGASFSGANASVQEATAHYMGMLATVINSLALQDALDSIGLQTRVMSALPVDRVAEQFIRRRAIRHLEKGRVIILSGGIGSPFVTTDTAAAQRALEIEADVILKATRVDGVYSDDPEKNPHAVLYEQLSYNEVIQKKLRVMDATAIALCNEHRKPILVFNFKQDGNIVRAVRGESVGTWIGDPQDTQTNQR", - "output": "cytoplasm ; ATP binding ; UMP kinase activity ; 'de novo' CTP biosynthetic process ; phosphorylation ; UDP biosynthetic process" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MEAVTGILNTTIAVVFTWVGYKTARIIWKYTPYSYPNARIKAMEAKLLTEQKFNELAESRTLQNFVVNLEDTDYKDYLADVSSYTVEEVEKALERALAGTYELMFKILPKRSKGFFELLLEGWDVRNIANVVKAKLANEPASDYVVELGTMLPKVKAMAEAKTLEEILVILEGTPYEEVYQKLLLGEIDVTRFETELYRMHYGKLLSYALSRKDDERIILEEFVRLSIDRVNILTALRAKKAGLSAEEIKPMLIPGGTVKLDPLLHVDSFDMALAELDSTKYGQVIRDVREEIEKDLSVLEKALNDHIIERISELERFYPLSIATPLSYVLRREREIRKLRAIAKLIENGVEPERIKELAGEVA", - "output": "proton-transporting V-type ATPase, V0 domain ; ATP binding ; proton-transporting ATP synthase activity, rotational mechanism ; proton-transporting ATPase activity, rotational mechanism ; proton motive force-driven plasma membrane ATP synthesis" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MELWFTEKQTKHFGITARINRTLHTEQTEFQKLDMVETEEFGNMLILDGMVMTTEKDEFVYHEMVAHVPLFTHPNPENVLVVGGGDGGVIREVLKHPSVKKATLVEIDGKVIEYSKQYLPSIAGALDNERVEVKVGDGFLHIAESENEYDVIMVDSTEPVGPAVNLFTKGFYAGISKALKEDGIFVAQTDNPWFTPELITTVFKDVKEIFPITRLYTANIPTYPSGLWTFTIGSKKHDPLEVSEERFHEIETKYYTKELHNAAFALPKFVGDLIK", - "output": "cytoplasm ; spermidine synthase activity ; spermidine biosynthetic process" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MSTPVSAEQQAREQDLVERVLRSFDATADPRLKQVMQALTRHLHAFLREVRLTEAEWETGIGFLTDAGHVTNERRQEFILLSDVLGASMQTIAMNNEAHGDATEATVFGPFFVEGSPRIESGGDIAGGAAGEPCWVEGTVTDTDGNPVPDARIEVWEADDDGFYDVQYDDDRTAARAHLLSGPDGGYAFWAITPTPYPIPHDGPVGRMLAATGRSPMRASHLHFMVTAPGRRTLVTHIFVEGDELLDRDSVFGVKDSLVKSFERQPAGAPTPGGREIDGPWSRVRFDIVLAPA", - "output": "4-hydroxycatechol 1,2-dioxygenase activity ; catechol 1,2-dioxygenase activity ; ferric iron binding ; hydroxyquinol 1,2-dioxygenase activity ; beta-ketoadipate pathway ; catechol-containing compound metabolic process" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MKKIDVKILDPRVGKEFPLPTYATSGSAGLDLRACLDDAVELAPGDTTLVPTGLAIHIADPSLAAMMLPRSGLGHKHGIVLGNLVGLIDSDYQGQLMISVWNRGQDSFTIQPGERIAQMIFVPVVQAEFNLVEDFDATDRGEGGFGHSGRQ", - "output": "dUTP diphosphatase activity ; magnesium ion binding ; dUMP biosynthetic process ; dUTP catabolic process" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MSSAIELKKQVVAEIADKFRASKATVIVDYRGLNVAEMTELRKQLREAGIEFKVYKNTMTRRALAEIGLEGLDEVFTGPNAIAFSNEDVVAPAKILSEFAKTHEALEIKGGVIEGSVASKEEIDALAKLPSREGLLSMLLSVLQAPIRNFALAVKAVADKQEEQGA", - "output": "large ribosomal subunit ; large ribosomal subunit rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MDARQLKVEAARAALAHVSDGMRLGIGTGTTAEEFVRLLADKVATGMTVIGVPTSERTAALCRELGVPLSTLEETPELDLTVDGADEVDPELTLIKGGGGALLREKIVAAASQRMIVIADRSKMVETLGRFPLPIEVNQFGLRATEIAIAKTAADLGLSGPITLRMTGGQAFVTDGGHFILDASFGRIPDTRALSNALHAIPGVVEHGLFIGLASTAIIAGGDGIQTVHAARKPGSSTNHDVA", - "output": "ribose-5-phosphate isomerase activity ; pentose-phosphate shunt, non-oxidative branch" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MLLSDRDLAAEIKAGTLALEPFDPALVQPSSIDVRLDKLFRVFNNHLYTHIDPSRQQDDLTSAVEVPDGEPFVLHPGEFVLASTLEVISLGDQLAGRLEGKSSLGRLGLLTHSTAGFIDPGFSGHVTLELSNVANLPIMLWPGMKIGQLCIFRLCSPAEHPYGSAVYGSRYQGQRGPTPSRSWQSWRTWPTR", - "output": "dCTP deaminase (dUMP-forming) activity ; dCTP deaminase activity ; nucleotide binding ; dUMP biosynthetic process ; dUTP biosynthetic process" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MKKWLLAAGLGLALATSAQAADKIAIVNMGSLFQQVAQKTGVSNTLENEFKGRASELQRMETDLQAKMKKLQSMKAGSDRTKLEKDVMAQRQTFAQKAQAFEQDRARRSNEERGKLVTRIQTAVKSVANSQDIDLVVDANAVAYNSSDVKDITADVLKQVK", - "output": "periplasmic space ; unfolded protein binding" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MDSWLEYDDIINQDIDIPSNDLSGSGTLCVGVHSSLLENSLNSIDSFISSKEEISWCGNQSTPIATKSHLSCINPQYVNPFDTSPVSVDTEFQDTYLLDAPSFAQPHFSERQSVDKTRSRCLSRNRRRKRHPNLHKNHQRLLGMSFPQDGFRRMPAESVNFSYFRDTGFNEPTIFPSSDTQNTRQLNLSKIATLIGYDCPLALVDVVTQKQIPNKMDMESWVKYMSLEPSKRGRIYDVLSLEVSTTKLAYYVRKPNIVRDLDLVNTVWPPGSFALGEYPHVDTYCLMSAENSYTEFHIEFGGSSAYYNILDGCKIFYLIPGTSKNWEAYTAWLTSSNDSDKKFLPNMVDVCYCVEVHSQQTILVPSGWIYAVVTPCDTISIAGNFLTFLHIYPQLSIYNLELQLGIEKEYQYPYFESIMWYTAIHFYLAFPDNSSRDGIDDIIAEYETGRLFDINAFTEQELDGFEELLNYLYIRAQILRDCDIIIDIYNEPVKISKNNGYNSAYTMVPPDLDEICVDFVQKFGAWITYHHRRSAKHPSCNCFSHLQTKLIDSGPKPANNSYQHQSNFIGVVISTNHNIIKKCQESQIQTGKNNCSFQLVKKRIKSTKKAPSWRSIIKAFKKRENTRCNFLSSLHATTFREDIVVRPKIKSFVLEQLIFQALFSFAINWTPSFFLNHSNFENIALSKETFNFGGEANCENTDTTLFTTWGDQGFRPSDSICYNDFNLLETANSDAEASIHELELQPLNAVNEREVDISQTDMTPSTALDTRVDTRVDSLPEFSNLILSPSSNDDSFQLDDLLSPSSSNLKQQIQKVVPQNSLEFSVGEKEKKAAEYSLLHTFSYKRLSMENEKPDTTKVPLKYNIQHEEMKAYRRKNDLEYIDQHFASSKSGISNGRNNNKEVNLTKAENVGIKKRRIMKNENNIYDFEDHSPVREKWGHRLRSRGAS", - "output": "heterochromatin ; heterochromatin island ; nucleus ; histone demethylase activity ; histone H3K36me/H3K36me2 demethylase activity ; metal ion binding ; transcription coregulator activity ; heterochromatin boundary formation ; protein demethylation ; regulation of transcription by RNA polymerase II" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MRVKILPLVFMTLLLIVPSQMLLPSGQANASTPGFIERVYTDKARYEPGELVTVTAQINNSGGTNWSGDVTMTIFHLENAVYSSVQHASIASGQTTDVTFSWTSDTTDFKGYFVSVDAGSLGQGYSSIDVSSDFAKYPRYGYISEFSSNETAAESAAKVNELAQDYKINAWQFYDWMWRHETMIKRTGGTIDPTWIDLFNRQISWPTINNQIAAIHNQNGAAMAYAMIYAARENYSGFGVNPEWGMYMDPAHTKQLDVDFGNNSTYMYLFDPANAGWQQFIHEQYLDAIQTANFDGIHIDQMGQRNNIYDYSGNSIDLATRFTPFIKAAKTKLTAANSNQDFMTFNIVDGTVNGWAANDVSKNANVDFLYSEIWHLSNSYMQLKDYIDSLRANSGNKAVVLAAYMNYGENIGDRYEAEDAALQHTAVNTDHAGYTGSGFVDQFADVNDSVTFTITAPEEGYYSLVFRFANHSGYTATRNLYVDSNFEIELPFQNQPNWDTWSHETWHQVYLTPGTHTIKLSYDSSNTGAINLDSLTLGTFDEHSIRLADAMMAASGATHIELGEDSQMLAHEYYPNRSKSMRSTLKSAMKDHYNFITAYENLLFDADVIDNDAGKQFINIAGVNTSPDGAANTVWHMSKRTPEYNILHLINLVNNDQNWRNSGNQPTAQTNLATKVYIGAEETITGVYAASPDHNQGATQSLPFTTGTDSSGSYISFTVPSLEYWSMIYMKRSTAAPVDNMYEAETAIKSNVSVNTNHAGYTGSGFVDQFATVNDGVSFIVHASSKDDYVLRFRYSNGGSDANRDVFLNGKYAGTVQLKHTGGWNQWAYGELTVPLAQGSHSVVLWYNSSNSGAVNLDHLKLDKTYIWQFDRQIASVPAGYRITFKAGLPGWVHFGTDNWKNVMDIPLASNGSSDSSLNYEASIGPFPSATTVDVTFLWDDNNNGILEDMIDRWEGTDFQIAIP", - "output": "carbohydrate binding ; glycosyltransferase activity" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MTLQQKLTQFPRLDLVGNATPLEKLSRLSDYLGREIYIKRDDVTPVALGGNKLRKLEFLAADALRQGADTLVTAGAIQSNHVRQTAAVAAKLGLHCVALLENPIGTEQANYLTNGNRLLLDLFNVDVVMCEALNDPNQQLAELATRVEAQGFRPYVVPIGGSNALGALGYVQCSLEIAAQAAGNVAFSSVVVASGSAGTHAGLAVGLQQLLPDAELIGVTVSRSADEQRPKVAQIQQALATSLGMTDPLAKITLWDSYFAPQYGMPNEEGIAAIKLLARLEGILLDPVYTGKAMAGLLDGIEQQKFCDKGPILFIHTGGAPALFAYHPQV", - "output": "D-cysteine desulfhydrase activity ; D-amino acid metabolic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MAAARMLVLLASLCALLLTASAAKWTPAFATFYGGSDASGTMGGACGYGDLYGAGYGTRTAALSTALFNGGASCGACFTIACDTRKTQWCKPGTSITVTATNFCPPNYALSGDAGGWCNPPRRHFDMSQPAWETIAVYRAGIVPVNYRRVPCQRSGGIRFAVNGHSYFELVLVTNVGGSGAVAQMWIKGSGTGWMAMSRNWGANWQSNARLDGQALSFRVQADDGRVVTAADVAPAGWSFGATYTSSAQFY", - "output": "extracellular region ; membrane ; anatomical structure morphogenesis ; plant-type cell wall organization" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MRHYEIVFMVHPDQSEQVPGMIERYTGAITGAEGKIHRLEDWGRRQLAYSINKLHKAHYVLMNVEASQEVIDELETNFRYNDAVIRSMVMRTKHAVTEASPMVKAKDERRERREDFANETSEETEAGDSEE", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MVDITAAELRAAEKIFGDRLDLAKRYVEHLATSGTERGLIGPREIPRLWSRHVLNCAVIESEIPQGSRVADVGSGAGLPGLCLAIARPDLELTLIEPLERRVIWLQEVVDDLGLDNVTVMRSRAELAVGHVEADVVTARAVSALTNLAGLTIPLLGGTGEVIAIKGRSAGEEIEKAAKAIRKLGGVETSVLTVGDNLLEEPTTVVRIVVNKPQKKS", - "output": "cytoplasm ; rRNA (guanine-N7-)-methyltransferase activity" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MASLLYFILFLLFVCISYYFTYYPTNKLQAAVMETDRENAIIIQRNDEIPTRTLDTAIFTDASTVASAQIYLYYNSNIGKIIMSLNGKKHTFNLYDDNDIRTLLPILLLSK", - "output": "membrane ; viral envelope ; virion membrane ; fusion of virus membrane with host plasma membrane ; viral entry into host cell" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MHLQTRAAVVTGAASGIGLALSARFARAGAGVVMADVDGDALHRRAAELTARGAQVTAVTADLTDPEVVERLADTAFDQLGDIDVVCNNAGVLGPVGQPLWEVPLERMRQVFEVNHWAHVLVARAFVPRLLERGRPAHLIHTASMSAFVVGAGSAAYAASKHADLAVARSLRADLRGTGVRVSVLCPGRVDTPMVQGLTAPRGAGGDTSVSAEDVAGLVWEALGSDRFYLFSNSDARIRLRDQFDDVWRHVSLPPPSPEEELWPAPKATTVTMNH", - "output": "oxidoreductase activity ; antibiotic biosynthetic process" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MEKQYRVLLYYKYVKIDEPEEFTAQHLKFCKELGLLGRILISEEGINGTVSGTVEQTEQYMNALKADPRFADMPIKIDEADGHAFRKMFVRHKKELVTLRLEDDVDPNVTTGKHLKPKDFYEQMQDPDTIVIDARNDYEYDLGHFRGAVRPDIEAFRELPDWIEEHKDMLEGKKILTYCTGGVRCEKFSGWLLKKGFEDVSQLDGGIVTYGKDPEVKGQMWDGQCYVFDERISVPVNRVEHVIIGKDYFTGEPCERYVNCANPACNKKMICTPENEYKYMRSCSHECRTNERNMYVKEHDMTQEEINERLALIEKEDHAAID", - "output": "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen ; tRNA modification" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MKLDLKILDARMRDYLPKYATTGSAGLDLRACLDAPVTLKPGDTALVPTGLAIHLADPGYAALILPRSGLGHKHGIVLGNLVGLIDSDYQGELMISTWNRGQTEFALNPFERLAQLVIVPVVQARFNLVDDFAQSERGAGGFGSTGRG", - "output": "dUTP diphosphatase activity ; magnesium ion binding ; dUMP biosynthetic process ; dUTP catabolic process" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MEPAIKYRLIKKEKHTGARLGELITPHGTFPTPMFMPVGTQASVKSLAPEELDAMGAGVILSNTYHLWLRPGEQIVKEAGGLHQFMNWKKGILTDSGGFQVFSLAKNRDITEEGVHFKNHLNGSKMFLSPEKAIQIENDLGPDIMMSLDECPPFFESYDYVSKSVARTSRWAERGLKVHQHPDYQGLFGIVQGAGFKDLREQSAKDLVSLDFPGYSIGGLSVGESKAEMNHVLDFTTPLLPENKPRYLMGVGSADALIDGAIRGVDMFDCVLPTRIARNGTCMTSHGRLVVKNAAYAHDFTPLDDNCDCYTCRNFTRAYIRHLIKADETFGLRLTSYHNLYFLLHLMKQVRQAIMDDNLLEFRQNFFEMYGFNDKNPKNF", - "output": "metal ion binding ; queuine tRNA-ribosyltransferase activity ; queuosine biosynthetic process ; tRNA-guanine transglycosylation" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MAKRDYYQVLGVAKNASDDEIKKAYRKLAMKHHPDRNPGNKDAEEHFKEAKEAYEMLSDSQKRAAYDQYGHAGVDPNMAGAGAQGFGGFADAFGDIFGDIFGQAAAGGRGGRSGPQVYRGADLRYSMEITLEQAAHGYDTQIRVPSWVSCEICHGSGAKPGTKPETCPTCNGSGAVRMSQGFFSIQQTCPKCHGTGTYIPEPCTHCHGAGKTKETKTLEVKIPAGIDDGMRIRSAGNGEPGINGGPSGDLYVEIHIKAHAVFERDGDDLHCQMPIPFTKAALGGEIEVPTLAGRATFTVPEGTQSGKTFRLRGKGIKGLRSSIAGDLYVHVQVETPVKLTDAQRDLLQQFEKSLVEGGARHSPQSKSWFDRVKSFFD", - "output": "cytoplasm ; ATP binding ; heat shock protein binding ; unfolded protein binding ; zinc ion binding ; DNA replication ; protein folding ; response to heat" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MYTRNLLWLVSLVSAAPLYAADVPANTPLAPQQVFRYNNHSDPGTLDPQKVEENTAAQIVLDLFEGLVWMDGEGQVQPAQAERWEILDGGKRYIFHLRSGLQWSDGQPLTAEDFVLGWQRAVDPKTASPFAGYLAQAHINNAAAIVAGKADVTSLGVKATDDRTLEVTLEQPVPWFTTMLAWPTLFPVPHHVIAKHGDSWSKPENMVYNGAFVLDQWVVNEKITARKNPKYRDAQHTVLQQVEYLALDNSVTGYNRYRAGEVDLTWVPAQQIPAIEKSLPGELRIIPRLNSEYYNFNLEKPPFNDVRVRRALYLTVDRQLIAQKVLGLRTPATTLTPPEVKGFSATTFDELQKPMSERVAMAKALLKQAGYDASHPLRFELFYNKYDLHEKTAIALSSEWKKWLGAQVTLRTMEWKTYLDARRAGDFMLSRQSWDATYNDASSFLNTLKSDSEENVGHWKNAQYDALLNQATQITDATKRNALYQQAEVIINQQAPLIPIYYQPLIKLLKPYVGGFPLHNPQDYVYSKELYIKAH", - "output": "ATP-binding cassette (ABC) transporter complex ; outer membrane-bounded periplasmic space ; peptide transmembrane transporter activity ; bile acid and bile salt transport ; peptide transport" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MFEVNPVLNKLKELSERTELLRGYLDYDAKKERLEEVSAELEQPEVWNEPERAQALGKERSALESVVATIDVLTQGAEDVEMLVSLAVEGEDEETFHEAETEADALEKKLVDLEFRRMFSGQHDASDCYMDIQSGSGGTEAQDWADMVLRMYLRWGEAHGYKPELIECSDGDVAGIKSATIKFTGEYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFCSAFVYPEIDEDVEIEINPADLRIDVYRASGAGGQHVNRTESAVRITHIPTNTVTQCQNDRSQHKNKDQAMKQLKAKLYELEMMKQNAEKQALEETKSDIGWGSQIRSYVLDDSRIKDLRTGVETRNTQSVLDGDLDKFIEASLKSGL", - "output": "cytoplasm ; translation release factor activity, codon specific" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MAVVLRGGITGGFLHHRRDASSVITRRISSVKAAGGGINPTVAVERATWLPGLNPPPYLDGNLAGDYGFDPLGLGEDPESLKWYVQAELVHSRFAMLGVAGILFTDLLRTTGIRNLPVWYEAGAVKFDFASTKTLIVVQFLLMGFAETKRYMDFVSPGSQAKEGSFFFGLEAALEGLEPGYPGGPLLNPLGLAKDVQNAHDWKLKEIKNGRLAMMAMLGFFVQASVTHTGPIDNLVEHLSNPWHKTIIQTLFTSTS", - "output": "chloroplast ; chloroplast thylakoid membrane ; photosystem I antenna complex ; chlorophyll binding ; metal ion binding ; pigment binding ; protein homodimerization activity ; photosynthesis, light harvesting in photosystem I ; response to cold ; response to high light intensity ; response to light stimulus ; response to low light intensity stimulus" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MLMAGQRGAWTMGDVVEKSLEGPLAPSTDEPSQKTGDLVEILNGEKVKFDDAGLSLILQNGLETLRMENALTDVILCVDIQEFSCHRVVLAAASNYFRAMFCNDLKEKYEKRIIIKGVDAETMHTLLDYTYTSKALITKQNVQRVLEAANLFQFLRMVDACASFLTEALNPENCVGILRLADTHSLDSLKKQVQSYIIQNFVQILNSEEFLDLPVDTLHHILKSDDLYVTEEAQVFETVMSWVRHKPSERLCLLPYVLENVRLPLLDPWYFVETVEADPLIRQCPEVFPLLQEARMYHLSGNEIISERTKPRMHEFQSEVFMIIGGCTKDERFVAEVTCLDPLRRSRLEVAKLPLTEHELESENKKWVEFACVTLKNEVYISGGKETQHDVWKYNSSINKWIQIEYLNIGRWRHKMVVLGGKVYVIGGFDGLQRINNVETYDPFHNCWSEAAPLLVHVSSFAATSHKKKLYVIGGGPNGKLATDKTQCYDPSTNKWSLKAAMPVEAKCINAVSFRDRIYVVGGAMRALYAYSPLEDSWCLVTQLSHERASCGIAPCNNRLYITGGRDEKNEVIATVLCWDPEAQKLTEECVLPRGVSHHGSVTIRKSYTHIRRIVPGAVSV", - "output": "B cell receptor signaling pathway ; germinal center formation ; response to bacterium" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MASRGITITTNKAITTSKSTLILKHDKFLPPRNMINEFPHDDVLRMCYRRHMRLKPFISQRSMIQTTYVDYVRYKYKNEDYPKKCRASGIAHKTPVQSVLQQAELSLRFCLQAVMQVKKGVSDERSVSNEIRLSRNMLKNILAIEHEKAKLIAQNPRQNYPILREAFSYISPTAHKSSLLLRFNALREFDRCLIRFNMCMGTKL", - "output": "sporulation resulting in formation of a cellular spore" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MSPAPPPCGFAEAESTNTKSAPKFRSACNACHEVKLKCLGGQPCARCRNKQVECVYSHAARIGKPKGSRNKKTLERLRQAKAMSRPEETQGEETTSLTAVDASQAINCRALSGSTRRDSSPLPPPHSDTDSAEGGAEEELLDQEERDEAEKPPLVENPPNLNPLEQISPPREDFLDLLAHSSLLNNTQHDLQHPTADMVPDGLAGFPHASTSAADDLSWMTSPTKSLLSTTFPAIEDDLQDLQDPFLCSSWRSACLPPSSSRSSFHFPRFNHFAEDTMGLEYASGMDATRSLGDPPHAMARAGSFSTSGPGSSQEGSHFLSSRHSQSSGMYQPVPKRPSCSCLKLQASALCRIHLVDRSHADMRGDTVLATASTILDSCNALILCPSCATDYKFLLLAIMTVRILLCWLRGLSATRTQNDNANMKLTLGEYEISGEEEAIIKNMLVSRALEKVKIAVRRLRERVNSITIQEVGNCSESTQRWDLTYIRMCLDHMEKQVGC", - "output": "nucleus ; DNA binding ; DNA-binding transcription factor activity, RNA polymerase II-specific ; zinc ion binding" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MKYAVIGDPVSHSLSPVMHQVNFKSLNMEDTYEALHIPTQDFHDIRHIIEDNHINGFNVTIPHKERIIPYLDEINDQAKAVGAVNTVKIINNKWIGYNTDGIGYVMGLKQVYPDLENAYVLILGAGGASKGIANELSKIVQPKLTIANRTMSRFETWDMDINAISLEQSEQYLDEFDIIINTTSAGLNNNDDIVISLDNLSSSTLVSDIIYIPYKTKFLKEAEFKGNTVYNGLDMFINQGAESFKIWTGKQPNILEMKYAVLNKLKGV", - "output": "NADP binding ; shikimate 3-dehydrogenase (NADP+) activity ; amino acid biosynthetic process ; aromatic amino acid family biosynthetic process ; chorismate biosynthetic process ; shikimate metabolic process" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MKLLWQVTVHHTWNAVLLPVVYLTAQVWILCAAIAAAASAGPQNCPSVCSCSNQFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDMPNLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCDILWLAWWLREYIPTNSTCCGRCHAPMHMRGRYLVEVDQAAFQCSAPFIMDAPRDLNISEDRMAELKCRTPPMSSVKWLLPNGTVLSHASRHPRISVLNDGTLNFSRVLLIDTGVYTCMVTNVAGNSNASAYLNVSSAELNTPNFSFFTTVTVETTEISPEDITRKYKPVPTTSTGYQPAYTTSTTVLIQTTRVPKQVPVPSTDTTDKMQTSLDEVMKTTKIIIGCFVAVTLLAAAMLIVFYKLRKRHQQRSTVTAARTVEIIQVDEDIPAAAPAAATAAPSGVSGEGAVVLPTIHDHINYNTYKPAHGAHWTENSLGNSLHPTVTTISEPYIIQTHTKDKVQETQI", - "output": "dendritic spine ; excitatory synapse ; glutamatergic synapse ; neuron spine ; plasma membrane ; postsynaptic density membrane ; postsynaptic membrane ; Schaffer collateral - CA1 synapse ; synapse ; excitatory synapse assembly ; modulation of chemical synaptic transmission ; postsynaptic density protein 95 clustering ; synapse organization ; synaptic membrane adhesion" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MKAIVKRRVEDKLYQNRYLVDPGRPHISVRKHLFPTPNLIALTQVCPAKCYQLNDRRQVIIVSDGCLECGTCNVLCGPDGDIEWTYPRGGFGVLFKFG", - "output": "iron ion binding ; iron-sulfur cluster binding ; nitrogen fixation" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MIKTLLRRMSSNTTIPTPNGSNHWTASKVRSTFLDYFKKQQHTYVPSSSVVPHNDPTLLFANAGMNQYKPIFLGTVDPASDFASLKRAANSQKCIRAGGKHNDLEDVGRDSYHHTFFEMLGNWSFGDYFKKEAIDYSWELLTKVYGLQEDRLYVTYFGGDEKQGLEPDLEAKNFWLKVGVPEDHILPGSVEDNFWEMGDQGPCGPCSEIHYDRIGGRNASALVNMDDPNVLEVWNVVFIQYNREADGNLRTLPNKHIDTGMGFERLVSILQNKYSNYDTDVFLPIFDKIREITGVRPYTGKFGNEDKDGIDTAYRVIADHVRTLTFAICDGGVPNNEGRGYVLRRILRRGSRYVRKYMNYPIGGFFQQLVDVVIEQNKEIFPEISSGAQDLKEILNEEELSFAKTLDRGEKLFEQYAIIASKTPEQTLSGKDVWRLYDTYGFPVDLTRLMAEEAGLKIDEEGFERAKEESREASKGSGTKDGKTLVKLDVHALSELDQNDAIPKTNDEFKYGLENVKAKVVGIYDGSKFVDSIEDPSIQYGILLDKTPFYAEQGGQEYDTGKLVIDGKSEFNVANVQVYAGYVLHTGNIVDGKLNVGDEIIATYDELRRWPIRNNHTGTHILNFALREVLGDGVDQKGSLVAPEKLRFDFSHKQAVTAKELEKIEAISNKYIKNNDKVYYKDVSLTKAKEINGLRAVFGETYPDPVRVVSIGVSVDDLLADPTNTKWHEISIEFCGGTHVAKTGDIKDLVIIEESGIAKGIRRIVAVTGHDAHHVQKVANEFEQEIDNASSLPFGVAKESKSKELGVALKKLSISVLDKQRLTEKFNKLDKSIKDNLKAKQKEETKKTLDVVNNWLNDKENASSFLVAHVPITANAKAITEAINLIKKQDKTKSIYLLTGETDKVAHGCYVSDEAIAKGINANELAKAVSENIGGKAGGKGNIVQGMGDKPQGINTAIEEVTKLFKEKL", - "output": "cytoplasm ; mitochondrion ; alanine-tRNA ligase activity ; amino acid binding ; aminoacyl-tRNA editing activity ; ATP binding ; tRNA binding ; zinc ion binding ; alanyl-tRNA aminoacylation ; mitochondrial alanyl-tRNA aminoacylation ; tRNA modification" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MTGKKRSASSSRWLHEHFSDKYVQQAQKKGLRSRAWFKLDEIQQSDKLFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLPMDPIVGVDFLQGDFRDELVMKALLERVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEGFDEYLREIRSLFTKVKVRKPDSSRARSREVYIVATGRK", - "output": "cytoplasm ; rRNA (uridine-2'-O-)-methyltransferase activity" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MTDTIFALATAAGRSAVAVVRVSGPRSSEIAAALCGRLPSPRLASVRTLKHNGVALDAALVLRFEKPASYTGEDSVEFHVHGGRAVVEALLAALSELGARLAEAGEFTRRAFENGKLDLAQAEGVADLIDAETEAQRRQALGQVGGALSQRYDRWRDLLVQALAMLEAAVDFPDEDLPEEVAERARPGLRQLSAELNAALADVSRGRRVRDGFRIALIGAPNAGKSTLLNGLAERDAAIVTDVAGTTRDVIEVPLVLGGYKVLVADTAGIRETADVIEAEGVRRAKAWAEAADLRLWVVDGFHVKQADARPEAIRVGDWLILNKTDIADADASAHVAERWAGEGLTVLHIAGTSAEGPEALRAALASHVADALSGAEFPAATRLRHAERLSEARSYLERALSDVGLEVELAAEDVRLAARALERISGRIDPEDVLGRVFSTFCIGK", - "output": "cytoplasm ; GTP binding ; GTPase activity ; metal ion binding ; tRNA modification" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MCPQPHADHAITRGDTGAAGGRNWSGPFRKTPGRLVGMTLIRAYQLTLSSFIGNSCRHLPTCSEYGFEAIARYGLWAGGWLTLFRVVRCGPGGTHGFDPVPDSLAPRQRWYTPWRYWQPRRKDA", - "output": "plasma membrane" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MSDMTPSEIVKKLDDYIIGQDDAKRAVAIALRNRWRRMQLDTELRQEITPKNILMIGPTGVGKTEIARRLAKLAEAPFIKVEATKFTEVGYVGKEVESIIRDLTDTAVKMVRHQAIEKMRDKAKELAQERILDILVSPARNSSGQVEGSQNTSTARQFFLEPLIKGELNEQEIEIDLAVTPVDIEIMSPPGMEEMTNQLQSMFQHMSSQKHKIRKMKIGDALKLLIDEEASKLVNPEELKQVAIHSVEQNGIVFIDEVDKICRHGSKSTSDVSREGVQRDLLPLVEGCTVSTKHGMVKTDHILFIASGAFQVAKPSDLIPELQGRFPIRVELKSLTPKDFERILTEPSASLTYQYKSLMKTEGIKIEFTKDGITSIAGAAGQVNENTENIGARRLHTILERVMEDISYNADKIKKKSITIDSKYVDTHLSKLINNEDLSRFIL", - "output": "HslUV protease complex ; ATP binding ; ATP hydrolysis activity ; peptidase activity ; proteasome-activating activity ; protein unfolding" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGERPYLVVDTGGFEPVAKDGILHQMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVNKAEGMKYTAVATDFYELGLGDPRAISAAHGDGVTDMINEALEVAYAGQPEEADDDDPSRGIKIAIVGRPNVGKSTLVNALIGEDRVIAFDMPGTTRDSIYVDFERNGKKYTLIDTAGLRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDAQQDISDQDAHIAGFVVEQGRALVIGVNKWDGLDDHARDRAKADLTRKLKFLDFAKSHYISAAKKTGIGALMRSVDDAYAAAMAKLPTPKLTRALIEAVEFQQPRRRGPVRPKLRYAHQGGQNPPLIVIHGNALDAVTDTYKRYLENRFRETFSLTGTPLRIEFRSSNNPYADKG", - "output": "GTP binding ; ribosome biogenesis" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MQQDGLGVGTRNGSGKGRSVHPSWPWCAPRPLRYFGRDARARRAQTAAMALLAGGLSRGLGSHPAAAGRDAVVFVWLLLSTWCTAPARAIQVTVSNPYHVVILFQPVTLPCTYQMTSTPTQPIVIWKYKSFCRDRIADAFSPASVDNQLNAQLAAGNPGYNPYVECQDSVRTVRVVATKQGNAVTLGDYYQGRRITITGNADLTFDQTAWGDSGVYYCSVVSAQDLQGNNEAYAELIVLGRTSGVAELLPGFQAGPIEDWLFVVVVCLAAFLIFLLLGICWCQCCPHTCCCYVRCPCCPDKCCCPEALYAAGKAATSGVPSIYAPSTYAHLSPAKTPPPPAMIPMGPAYNGYPGGYPGDVDRSSSAGGQGSYVPLLRDTDSSVASEVRSGYRIQASQQDDSMRVLYYMEKELANFDPSRPGPPSGRVERAMSEVTSLHEDDWRSRPSRGPALTPIRDEEWGGHSPRSPRGWDQEPAREQAGGGWRARRPRARSVDALDDLTPPSTAESGSRSPTSNGGRSRAYMPPRSRSRDDLYDQDDSRDFPRSRDPHYDDFRSRERPPADPRSHHHRTRDPRDNGSRSGDLPYDGRLLEEAVRKKGSEERRRPHKEEEEEAYYPPAPPPYSETDSQASRERRLKKNLALSRESLVV", - "output": "bicellular tight junction ; cell junction ; chylomicron ; extracellular exosome ; low-density lipoprotein particle ; plasma membrane ; tight junction ; tricellular tight junction ; very-low-density lipoprotein particle ; epithelial structure maintenance ; establishment of blood-brain barrier ; establishment of skin barrier ; liver development ; maintenance of blood-brain barrier ; protein localization to tricellular tight junction ; tricellular tight junction assembly" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MFILTMGLNHHTAPIDIREKLVFKESEEEMALVTLQQEKSILENVIISTCNRTEIIAVVDQIHTGRYYLKRFMANWFQMDMEKIEPYLFFHEESDAVNHLYKVTAGLDSLVLGETQILGQVKHAFEIAKQTATTGTLLNKLFREVVTFAKKVHHHTKINENAVSVSYAAVEVAKKLYGSLDNKKIVLVGAGEMSELALQNLAGSGIADITIINRTKSNAELLANQFQAKVGAYENMNEHLMLADIVLVSTSAAEPIIKQAAMQDLMEQKASSMLVIDIGLPRNVEHDCSYIPNFHLYDIDDLAGVVSANSLERQRIVLELEKTIEAEVRNFFEWEKQLGVVPVIRALREKALDMQEVTMTSLENKLPGLTEREYIQIGKHMKSIINQMLKQPISELKEMSVEEDATTSIEHFKRIFGLSETDVTVIEKEQAETRS", - "output": "glutamyl-tRNA reductase activity ; NADP binding ; protoporphyrinogen IX biosynthetic process" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MTLDPKIAARLKRNADGLVTAVVQERGSGDVLMVAWMNDEALARTLQTREATYYSRSRAEQWVKGATSGHTQHVHSVRLDCDGDAVLLTVDQVGGACHTGDHSCFDAAVLLEPDD", - "output": "cytoplasm ; magnesium ion binding ; phosphoribosyl-AMP cyclohydrolase activity ; zinc ion binding ; histidine biosynthetic process" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MAQRAFPNPYADYNKSLAEGYFDAAGRLTPEFSQRLTNKIRELLQQMERGLKSADPRDGTGYTGWAGIAVLYLHLYDVFGDPAYLQLAHGYVKQSLNCLTKRSITFLCGDAGPLAVAAVLYHKMNNEKQAEDCITRLIHLNKIDPHAPNEMLYGRIGYIYALLFVNKNFGVEKIPQSHIQQICETILTSGENLARKRNFTAKSPLMYEWYQEYYVGAAHGLAGIYYYLMQPSLQVSQGKLHSLVKPSVDYVCQLKFPSGNYPPCIGDNRDLLVHWCHGAPGVIYMLIQAYKVFREEKYLCDAYQCADVIWQYGLLKKGYGLCHGSAGNAYAFLTLYNLTQDMKYLYRACKFAEWCLEYGEHGCRTPDTPFSLFEGMAGTIYFLADLLVPTKARFPAFEL", - "output": "cytoplasm ; plasma membrane ; G protein-coupled receptor activity ; glutathione binding ; glutathione transferase activity ; low-density lipoprotein particle receptor binding ; SH3 domain binding ; zinc ion binding ; carbohydrate metabolic process ; G protein-coupled receptor signaling pathway ; peptide modification ; regulation of neuron apoptotic process ; regulation of oxidative stress-induced neuron death" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MSNAKTLYEKVYDAHVAVAAKGETPILYIDRHLVHEVTSPQAFDGLREKGRNVRQVGKTFATMDHNVSTQTKDINASGEMARIQMETLSKNCEEFGVTLYDLNHKYQGIVHVMGPELGITLPGMTIVCGDSHTATHGAFGSLAFGIGTSEVEHVLATQTLKQARAKTMKIEVKGKVTEGITAKDIVLAIIGKTTAAGGTGYVVEFCGEAITDLTMEGRMTVCNMAIELGAKAGLIAPDATTFDYITGRKFSPQGEDLTAAIEYWSSLKTDDDAKFDAVVSLDASEIKPQVTWGTNPGQVIAIDQPIPAPESFSDPVEKVSAEKALAYMGLEAGKSLTDYNVDKVFVGSCTNSRIEDIRAAAAVAKGNKVAAHVQALIVPGSEQVKAQAEKEGLDIIFKEAGFEWRLPGCSMCLAMNNDRLGPQERCASTSNRNFEGRQGRDGRTHLVSPAMAAAAAIAGHFVDIRTITEKA", - "output": "3-isopropylmalate dehydratase activity ; 4 iron, 4 sulfur cluster binding ; metal ion binding ; leucine biosynthetic process" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MTDDLNKVWPSGLTVAEAEEVHKQLILGTRVFGGMALIAHFLAAAATPWLG", - "output": "plasma membrane ; plasma membrane light-harvesting complex ; bacteriochlorophyll binding ; electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity ; metal ion binding ; photosynthesis, light reaction" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MTQLAIGKPAPLGAHYDGQGVNFTLFSAHAERVELCVFDANGQEHRYDLPGHSGDIWHGYLPDARPGLRYGYRVHGPWQPAEGHRFNPAKLLIDPCARQIDGEFKDNPLLHAGHNEPDYRDNAAIAPKCVVVVDHYDWEDDAPPRTPWDSTIIYEAHVKGLTYLHPEIPVEIRGTYKALGHPVMINYLKQLGITALELLPVAQFASEPRLQRMGLSNYWGYNPVAMFALHPAYACSPETALDEFRDAIKALHKAGIEVILDIVLNHSAELDLDGPLFSLRGIDNRSYYWIREDGDYHNWTGCGNTLNLSHPAVVDYASACLRYWVETCHVDGFRFDLAAVMGRTPEFRQDAPLFTAIQNCPVLSQVKLIAEPWDIAPGGYQVGNFPPLFAEWNDHFRDAARRFWLHYDLPLGAFAGRFAASSDVFKRNGRLPSAAINLVTAHDGFTLRDCVCFNHKHNEANGEENRDGTNNNYSNNHGKEGLGGSLDLVERRRDSIHALLTTLLLSQGTPMLLAGDEHGHSQHGNNNAYCQDNQLTWLDWSQASSGLTAFTAALIHLRKRIPALVENRWWEEGDGNVRWLNRYAQPLSTDEWQNGPKQLQILLSDRFLIAINATLEVTEIVLPAGEWHAIPPFAGEDNPVITAVWQGPAHGLCVFQR", - "output": "glycogen debranching enzyme activity ; hydrolase activity, hydrolyzing O-glycosyl compounds ; glycogen catabolic process" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MVPEDVYQSKKSELLYLQKVTGLTDTLKAQLDELSKQVHQMHDNAECVSSVLKNWDSILNSISQATLSLLQYTENDYEVGAWSNGSRPEADKEPPLPETLVRVNVANESQE", - "output": "cytoplasm ; DASH complex ; microtubule ; mitotic spindle midzone ; mitotic spindle pole body ; microtubule plus-end binding ; attachment of spindle microtubules to kinetochore ; cell division ; mitotic sister chromatid biorientation ; positive regulation of attachment of spindle microtubules to kinetochore ; positive regulation of microtubule polymerization" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MPKITKIEVQKKNKERFNLFLDEQFEMGIDIDTLVKFNLKKGQQLEAADMAEIQKYDHYRIGLNKAIQYLSYKKRTEKEVIQYLQKEEISEQAISEVIEYCYREKLIDHQDYAESLKNTMIRTTDKGPKIYQQKLYQLGIEPNIIEIFTELYREQQELDDIIQIAEKISKTKKGPQNKVKEKVMQSLIQKGFEMETIHAVLNEMDFTQDEAVLDDLLQRDLEKIYNKNRKKYTQQKLISKTIEGLMRKGYKYDKIKAKLEESGIADGTEEIE", - "output": "cytoplasm ; regulation of DNA repair" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MANTKSALKQIRKNNLKRLQNKFVLKTTKTAIKKLKLESKKNLNAFPKISSLIDKLAKKKIIHKNKSNRIKSKLVKLIN", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLRSGSKFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVWVARNRFAVLDRMHSLLIKNLKNEITKKIQVPNCDEIFYAGTGNLLLRDADSITLFDVQQKRTLASVKISKVKYVIWSADMSHVALLAKHAIVICNRKLDALCNIHENIRVKSGAWDESGVFIYTTSNHIKYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFKLALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYLSAATHGLDEEAESLKETFDPEKETIPDIDPNAKLLQPPAPIMPLDTNWPLLTVSKGFFEGSIASKGKGGALAADIDIDTVGTEGWGEDAELQLDEDGFVEAPEGLGEDVLGKGQEEGGGWDVEEDLELPPELDVPSGVSGSAEDGFFVPPTKGTSPTQIWCNNSQLPVDHILAGSFETAMRLLHDQVGVIQFGPYKQLFLQTYARGRTTYQALPCLPSMYSYPNRNWKDAGLKNGVPAVGLKLNDLIQRLQLCYQLTTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLCMEIERKKLPKETLDQQKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLELGPKPEVAQQTRKILSACEKNPTDACQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGACYSPEFKGQICRVTTVTEIGKDVIGLRISPLQFR", - "output": "axon ; COPI vesicle coat ; COPI-coated vesicle ; cytoplasm ; extracellular space ; Golgi apparatus ; Golgi membrane ; growth cone ; neuronal cell body ; hormone activity ; mRNA binding ; structural molecule activity ; endoplasmic reticulum to Golgi vesicle-mediated transport ; intra-Golgi vesicle-mediated transport ; intracellular protein transport ; pancreatic juice secretion ; protein localization to axon ; protein localization to cell leading edge ; retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MCKQMNLEGLTTEARNEATKKIDQVSTLEMVTLINQEDQKVAQAIEKVLPQIAAAIDAAAERFKKGGRLIYCGAGTSGRLGALDAIELTPTYSVSPERAFGILAGGEKAMYQAIEGAEDSKELAIEDLTQHQLTARDVVIAIAASGRTPYAVSAIEYGKKVGALTISVTCNNQSPMNQLAEIGIAPIVGPEVITGSTRMKAGSAQKMVLNMFSTGIMVKVGNIYQNLMVNVQPTNEKLIQRATNIIKEAAEIEESQAKEYLEAAQLEVAPAIVMAKAHVDFQKAKQLLAEHDGRISEVLA", - "output": "carbohydrate derivative binding ; carbon-oxygen lyase activity ; amino sugar catabolic process ; carbohydrate metabolic process ; N-acetylmuramic acid catabolic process" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MENLKHIITLGQVIHKRCEEMKYCKKQCRRLGHRVLGLIKPLEMLQDQGKRSVPSEKLTTAMNRFKAALEEANGEIEKFSNRSNICRFLTASQDKILFKDVNRKLSDVWKELSLLLQVEQRMPVSPISQGASWAQEDQQDADEDRRAFQMLRRDNEKIEASLRRLEINMKEIKETLRQYLPPKCMQEIPQEQIKEIKKEQLSGSPWILLRENEVSTLYKGEYHRAPVAIKVFKKLQAGSIAIVRQTFNKEIKTMKKFESPNILRIFGICIDETVTPPQFSIVMEYCELGTLRELLDREKDLTLGKRMVLVLGAARGLYRLHHSEAPELHGKIRSSNFLVTQGYQVKLAGFELRKTQTSMSLGTTREKTDRVKSTAYLSPQELEDVFYQYDVKSEIYSFGIVLWEIATGDIPFQGCNSEKIRKLVAVKRQQEPLGEDCPSELREIIDECRAHDPSVRPSVDEILKKLSTFSK", - "output": "cell junction ; cytoplasm ; cytosol ; nucleus ; plasma membrane ; ATP binding ; identical protein binding ; protein kinase binding ; protein-containing complex binding ; cell surface receptor signaling pathway ; defense response to virus ; execution phase of necroptosis ; necroptotic process ; necroptotic signaling pathway ; protein homotrimerization ; protein phosphorylation" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MKIQDYTKQMVDEKSFIDMAYTLLNDKGETMNLYDIIDEFRALGDYEYEEIENRVVQFYTDLNTDGRFLNVGENLWGLRDWYSVDDIEEKIAPTIQKFDILDADDEEDQNLKLLGEDEMDDDDDIPAQTDDQEELNDPEDEQVEEEINHSDIVIEEDEDELDEDEEVFEDEEDFND", - "output": "DNA-directed RNA polymerase complex ; DNA-directed 5'-3' RNA polymerase activity ; DNA-templated transcription ; regulation of DNA-templated transcription" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MKPLIAIVGRPNVGKSMLFNRILREKSAIVDSTPGVTRDRHISPGEWQGKQFLLMDTGGYCPEGDVISMAMLEQTLMAIRDADIILFLADVRSGLTYDDLEISKLLQRTFQHKQIFFAVNKVETPQLSIDAESFVSTGFTKPYFVSARDGSGVAELLDDMLDSLPVQEKQLVEKDLPTNLAVVGRPNVGKSSFVNALLGANRLIVSDIPGTTRDAIDSRFTRKKQDFVLIDTAGLRKRTKIDAGIEYYSSLRTDKAIERCDVALVMIDARTGIENQDMKIINMAVERKRGVLLLINKWDLVEKDSKTSAHYEKEVRSHMGNLAYIPLLFISALTKKNLYRAIDTAQEISENRSRKITTSALNRFLEVALAEKHPSTKSGKELKIKYMTQIEAPWPVFAFFCNDPELLQTNFRKFLENKLREHFKLEGVTVSLRFFKK", - "output": "GTP binding ; ribosome biogenesis" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MISQIDKAELLERFLHYVSFHTQSKPNAKHSPSSVGQMKLAMQLQKELIQLGLENVEVSKYAVVTAFLPANDPNLTKTIGLVAHLDTSPQCSGKNVRPEVIEEYRGGDIALGIGEEFISPVYYSFMQKLVGQTLIVTDGTTLLGADNKAGIAEIMTALSILQKENIPHCNIRVAFTPDEEIGLGIHYFPMEKFSCDWAYTIDGGEVGELEYENFNAATAKVRFFGRNIHTGYAKGKMLNALTLACEFQQVFPVDEVPEKTDGKAGFYHLEDFSGDIEQVELTYLIRDFDEQNFAQRKAFIKNQVEKFNAKKGLKKPIELEIQDSYQNMYDVVKNVPQSIELADRAMKAVGIKPNHKPIRGGTDGAFLASKGLACPNIFTGGYNFHSKHELVSLQGMENTVQVIIEMLKCKDL", - "output": "cytoplasm ; metallopeptidase activity ; tripeptide aminopeptidase activity ; zinc ion binding ; peptide catabolic process ; proteolysis" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MADVLSVLRQYNTQKKEIVVKGDEVIFGEFSWPKNVKTNYVIWGTGKEGQPREYYTLDSILFLLNNVHLSHPVYVRRAATENIPVVRRPDRKDLLAYLNGETSTSSSIDRSAPLEIGLQRSTQVKRAADEILAEAKKPRIEDEECVRLDKERLAARLEGHKEGIVQTEQIRSLSEAMSVEKIAAIKAKIMAKKRSTIKTDLDDDITALKQRSFVDAEVDVTRDIVSRERVWRTRTTILQSTGKNFAKNIFAILQSVKAREEGRAPEQRPAPNTAPTDPTLRNKQPIPAAYNRYDQERFKGKEETEGFKIDTMGTYHGMTLKSVTEGASARKTQTPAAQPVPRPVSQARPPPNQKKGSRTPIIIIPAATTSLITMLNAKDLLQDLKFVPSDEKKKQGCQRENETLIQRRKDQMQPGGTTVSVTVPYRVVDQPLKLMPQDWDRVVAVFVQGPAWQFKGWPWLLPDGSPVDIFAKIKAFHLKYDEVRLDPNVQKWDVTVLELSYHKRHLDRPVFLRFWETLDRYMVKHKSHLRF", - "output": "Cdc73/Paf1 complex ; nucleus ; RNA polymerase II complex binding ; cell cycle ; endodermal cell fate commitment ; histone modification ; mRNA polyadenylation ; negative regulation of cell population proliferation ; negative regulation of G1/S transition of mitotic cell cycle ; negative regulation of myeloid cell differentiation ; negative regulation of transcription by RNA polymerase II ; positive regulation of cell cycle G1/S phase transition ; positive regulation of mRNA 3'-end processing ; positive regulation of transcription elongation by RNA polymerase II ; positive regulation of Wnt signaling pathway ; recruitment of 3'-end processing factors to RNA polymerase II holoenzyme complex ; stem cell population maintenance ; transcription elongation by RNA polymerase II" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MEQLPSNLQVLLQAAEYVERREREAEHGYASILPCDPATPGRRKRQRTNSNPDNVRSVHNELEKHRRAQLRRCLEQLKQQVPLSMENSRHTTLSLLHRAKQHIKKLEDQELRAKSLKEKLRADQQKLRQRLKRLLPPNTERIRTDSLDSSNLSSERSDSDQEDLEVDVEGIILSGNEGELFVSFSAGLEHSYSTPAHAWL", - "output": "nucleus ; DNA binding ; protein dimerization activity" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MAGSPSRAAGRRLQLPLLSFLQGATAVLFAVFVRYNHKTDAALWHRGNHSNADNEFYFRYPSFQDVHAMVFVGFGFLMVFLQRYGFSSVGFTFLLAAFALQWSTLVQGFLHSFHGGHIHVGVESMINADFCAGAVLISFGAVLGKTGPAQLLLMALLEVVLFGINEFVLLHLLGVRDAGGSMTIHTFGAYFGLVLSQVLYRPQLEKSKHRQGLYHSDLFAMIGTIFLWIFWPSFNAALTSLGAGQHRTALNTYYSLAASTLGTFALSALVGEDGRLDMVHIQNAALAGRVVVGTSSEMMLTPFGALAAGFLAGTVSTLGYKFFTPILESKFKVQDTCGVHNLHGMPGVLGVLLGVLVAGLATHEAYGDGLESVFPLIAEGQRSATSQAMYQLFGLFVTLMFASVGGGLGGLLLKLPFLDSPPDSQCYEDQVHWQAPGATLSPLPTPAFQVPGEHEDKAQRPLRVEEADTQA", - "output": "basolateral plasma membrane ; cytoplasmic vesicle membrane ; spectrin-associated cytoskeleton ; ammonium transmembrane transporter activity ; carbon dioxide transmembrane transporter activity ; ammonium transmembrane transport" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MHLLIPAAGMGRRMGSDRNKLRLMLHGKPLLAWTLLAAESSISISWIGIIGQLEDEPTWETLLNTLSLNKPVVFIEGGQTRQESVYNGLQALPPEAEQVLIHDGARCLATPELLDRCAHALHKYQGFVAAVPVKDTIKVVDTTHQIQGTPDRSQLWAAQTPQGFQVVPLKKCHEQGRQQGWEVTDDAALFEKLDLPVHIVVGEETNLKVTTPADLAIAELILEQRLQKNSQTDGFGS", - "output": "2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity ; isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway ; terpenoid biosynthetic process" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MSKQTFTTTFAGKPLVVEVGQVAKQANGATVVRYGESTVLTAAVMSKKMATGDFFPLQVNYEEKMYAAGKFPGGFMKREGRPSTDATLTARLIDRPIRPMFAEGFRNEVQVINTVLSYDENASAPMAAMFGSSLALSISDIPFNGPIAGVQVGYIDGEFIINPDKEQMEASLLELTVAGSKEAINMVESGAKELSEDIMLEALLKGHQAIQELIAFQEQIVAVVGKEKAEVELLQVDADLQADIVAKYNAQLQKAVQVEEKKAREAATEAVKEMVKAEYEERYAEDENLATIMRDVAEILEQMEHAEVRRLITEDKIRPDGRKIDEIRPLDAVVDFLPKVHGSGLFTRGQTQALSILTLAPMGETQIIDGLAPEYKKRFLHHYNFPQYSVGETGRYGAAGRREIGHGALGERALEQVLPSLEEFPYAIRLVAEVLESNGSSSQASICAGTLALMAGGVPIKAPVAGIAMGLISDGTNYTVLTDIQGLEDHFGDMDFKVAGTREGITALQMDIKIAGITPQILEEALAQAKKARFEILDVIEATIAEPRPELAPTAPKIDTIKIDVDKIKVVIGKGGETIDKIIAETGVKIDIDDEGNVSIYSSDQAAINRTKEIIAGLVREAKVGEVYHAKVVRIEKFGAFVNLFDKTDALVHISEIAWTRTTNVSDVLEVGEDVDVKVIKIDEKGRVDASMKALIPRPPKPEKKEEKHD", - "output": "cytoplasm ; magnesium ion binding ; polyribonucleotide nucleotidyltransferase activity ; RNA binding ; mRNA catabolic process ; RNA processing" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MKPSDGLEALQNLLGYRFGDEGLLHRALVHRSYLHENPHLDEKDNETLEFLGDAVLGLAISHFLLEQFPDYNEGELSRLRSAIVNERELTRIAVELNLGEYLLLGKGEEMTGGRRKASLLADSLEALLASIYLDGGLDAVLGVIKKLFDVYLRFEKREHVLKALDKDYKTQLQELTQARYKLTPVYVLDREEGPDHDKTFHMNVVLEGQVLAGGSGKSKKDAQQAAAEKALQIIAADSWSLD", - "output": "cytoplasm ; metal ion binding ; ribonuclease III activity ; rRNA binding ; mRNA processing ; rRNA processing ; tRNA processing" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MVDIIKTNATFKAGKGNKGTLSFEIPAKQISSGIDQAFNKQKDKINIPGFRKGHVSKELFLARFGEEALYEDALNAILPDIYDQAVNEADITVVGQPQIIPDDLKHGGPSKIHAEVTLAPTVELGDYKGVEVEKESDEVSDKELNAELERLQKGEAELVPAKEDQVSEKGDTVVIDFDGSVDGKQFDGGKAQNFSLSLGSGQFIPGFEDQLVGHKAGDDVDVKVTFPKDYQAKNLAGKEAVFAVTIHELKKLETPALDNEFAKDVDDSVLVLEELKAKTKEKLAKDKAEKNKDAFEDAAIQKVVDGAKINPEKLPEEMINDDVSRQMQTFFNNLAGQGVKPEMYFQIPNQPGAVKATNDRRRTNRVKTNLVLEEIARVEKINPSNEEIDKEIKSLASEYNIKESEVEKSVSAGMLSHDLKVQQAVELIVNSAQAVEKK", - "output": "cytoplasm ; peptidyl-prolyl cis-trans isomerase activity ; cell cycle ; cell division ; protein folding ; protein transport" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MYAVIKTGGKQYRVATGEKLKVEQIPADIGQEITLDQVLSVGEGDQLKVGTPLVSGAVVKATVLAHGRHDKIKIFKMRRRKHYQKHQGHRQNYTEIRIEAITA", - "output": "cytoplasm ; ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MKNYKFTISFVGTNYSGWQYQPNVPTIQNEVEEKLYYIVNKKKPIKQKIRAIGCSRTDKGVHAIEFVFNVKMEFDKDLNFLRKALNSALPKDIKIHNIEEVPLEFNSRFDALKKTYIYKLFFDEKNSPFFQDRAMLVYKPTDLGKMMEISHLFLGYKDFRGFTKELEDENGYCSVENITFKVDYPLVEISITANRFLRYMVRRMVGTMLSYAQGLISIDDVNDFLKAKRVSNHTAKAHGLYLKKVYY", - "output": "RNA binding ; tRNA pseudouridine synthase activity ; tRNA pseudouridine synthesis" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MQDSLTLNPIARVDGTLNLPGSKSVSNRALLLAAQANGTTRLTNLLDSDDVRHMLTALGQLGVNYRLSADRRSCEIDGLGGPLRADEALTLFLGNAGTAMRPLAAALCLQAQDVTLTGEPRMKERPIGHLVDALRQGGAQIDYLEHEHYPPLRLRGGYQGGDITVDGSVSSQFLTALLMMAPLAPQNSCIRIKGELVSRPYIDITLALMKSFGIEVRHDNYQVFYLTGGSVYRSPGEYLVEGDASSASYFLAAAAIRGGTVRVTGIGRHSVQGDIRFADVLESMGATIRWGNDYIECSRASLHTIDMDMNHIPDAAMTIATTALFASGGTTTLRNIANWRVKETDRLTAMATELRKVGATVIEGEDYLTVTPSARLSAARIGTYNDHRMAMCFALVALSDTPVTILDPQCTHKTFPDFFARLSALSTPASPHSAP", - "output": "cytoplasm ; 3-phosphoshikimate 1-carboxyvinyltransferase activity ; amino acid biosynthetic process ; aromatic amino acid family biosynthetic process ; chorismate biosynthetic process" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MSTAVQVDDVMRYRDSRFQTIAAKLLPTQYLVVDDDTALTTTLGSCVAACLRDPVLKIGGMNHFLLPEGQVGDGAPARYGSYAMELLINDMLKRGAHRKRIEAKVFGGANVLKGFTSNPVGTRNAEFVRQYLQAEHIPIIAEDLCGIHPRKVWFFPTTGRVVVQRLPHAHEAEVAAAESAVRARLSKAPVTGGVELFE", - "output": "protein-glutamine glutaminase activity ; chemotaxis" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MLGALLLSGAVHAAVQPLDSVVAIVDNDVIMKSQMDQRVREVQQTIAKRGSGVPPAEALQPQVLDRLILENLQLQMGERSGIRVSDEELNQAIGTIAQRNNMSVEQFRAALAHDGLSYNDAREQVRREMIISRVRQRRVAERIQVSQQEVKNFLASDMGKAQLSEEFHLANILIATPDSASSDAIQAAAVKAKGIYDQLKKGADFTRLAATSSSSENALEGGDMGWRKAAQLPPPFGDMLSSMPVGDVTPPARTPGGFIILKLLEKRGGQGQAQMRDEVHVRHILIKPSEIRNEEETKRLAQKIYDRIENGEDFAELAKSFSEDPGSALNGGDLNWVDPNSLVPEFRQVMSETPQGVLSKPFQTQYGWHVLEVLGRRSTDATDQAREQQALNVLRNRKYDEELQTWLRQIRDEAYVEIKLPGATQAAQ", - "output": "outer membrane-bounded periplasmic space ; peptide binding ; peptidyl-prolyl cis-trans isomerase activity ; unfolded protein binding ; Gram-negative-bacterium-type cell outer membrane assembly ; protein folding ; protein stabilization" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MRNSFKIMTALALGLFAMQANAKFKVVTTFTVIQDIAQNVAGNAATVESITKPGAEIHEYEPTPKDIVKAQSADLILWNGLNLERWFERFFQNVKDKPAVVVTEGIQPLSIYEGPYKDAPNPHAWMSPSNALIYIENIKNALVKYDPQNAAVYEKNAADYAQKIKQLDEPLRAKLAQIPEAQRWLVTSEGAFSYLAKDYNLKEGYLWPINAEQQGTPQQVRKVIDLVRKNNIPVVFSESTISAKPAQQVAKESGAKYGGVLYVDSLSAKNGPVPTYIDLLNVTVSTIVKGFGK", - "output": "cell outer membrane ; cell surface ; metal ion binding ; cell adhesion ; metal ion transport" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MAPQTSNLWILLLLVVVMMMSQGCCQHWSYGLSPGGKRDLDSLSDTLGNIIERFPHVDSPCSVLGCVEEPHVPRMYRMKGFIGSERDIGHRMYKK", - "output": "extracellular region ; hormone activity" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MGEPQQVSALPIPPMQYIKEYTDENIRKSLAPKPPVPIKDSYMMFGNQFQCDDLIIRPLETQGIERLHPVQFDHKKELRKLLMSILVNFLDMLDILIRSPGSIRREEKLEDLKLLFVHMHHLINEYRPHQARETLRVMMEVQKRQRLETAERFQKHLERVVEMIQNCLASLPDDLPLPDGTVSVKTEPMDVQEPCTDHHEGPQGAAASVKEATIDKDAAMCGIIDEMT", - "output": "mediator complex ; transcription coregulator activity ; regulation of transcription by RNA polymerase II" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MAANAEPRRRPGVGVGVVVLSCEHPRCVLLGKRKGSFGAGSFQLPGGHLEFGETWEECAQRETWEEAGLHLKNVCFASVVNSFVEKENYHYVTILMKGEVDMTHDSEPRNMEPEKNESWEWVPWEEFPPLDQLFWALRCLKEQGYDPFKEDLNHLEGYRGEHLERTTKTP", - "output": "cytosol ; 8-oxo-7,8-dihydrodeoxyguanosine triphosphate pyrophosphatase activity ; 8-oxo-7,8-dihydroguanosine triphosphate pyrophosphatase activity ; 8-oxo-dGDP phosphatase activity ; metal ion binding ; nucleoside triphosphate diphosphatase activity ; dGTP catabolic process ; DNA protection ; mitotic cell cycle ; nucleoside phosphate catabolic process ; purine deoxyribonucleoside triphosphate catabolic process ; purine nucleotide catabolic process ; regulation of proteasomal protein catabolic process ; response to reactive oxygen species ; xenobiotic catabolic process" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MKIDLNADLGEGCTSDAELLTLVSSANIACGFHAGDAQTMQACVREAIKNGVAIGAHPSFPDRKNFGRSAMQLPPETVYAQTLYQIGALATITRAQGGVMRHVKPHGMLYNQAAKEAQLADAIARAVYACDPALVLVGLAGSELIRAGKQYGLTTREEVFADRGYQADGSLVPRSQSGALIEDEEQALAQTLEMVQHGRVKSITGEWATVTAQTVCLHGDGEHALAFARRLRSAFAEKGIVVAA", - "output": "5-oxoprolinase (ATP-hydrolyzing) activity ; ATP binding ; carbohydrate metabolic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MVMSDPIADLLTRIRNANVVRHEVVEVPSSNIKKAIANIMLTEGYIRDLEEYRDGSVDMLRITMKYGQNKERIITGLKRISKPGLRVYCRKDETPKVLNGLGVAVVSTSKGIVTDREARKLGVGGEVLCYIW", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MSKASYVKFEVPQDLADKVLEAVRKAKESGKIKKGTNETTKAVERGQAKLVVIAEDVQPEEIVAHLPLLCDEKKIPYVYVSSKKALGEACGLQVATASAAILEPGEAKDLVDEIVKRVNEIKGKTSS", - "output": "cytoplasm ; ribonucleoprotein complex ; ribosome ; ribonuclease P activity ; rRNA binding ; structural constituent of ribosome ; ribosome biogenesis ; translation ; tRNA 5'-leader removal" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MIQMQSTLEVACNSGARRVQCIKVLGGSHRRYAGIGDVIKVSVKEAIPRGKAKKGDVYNAVVVRTKKGVRRPDGSVIRFDRNAAVLLNANLAPIGTRIFGPVTRELRTEQFMKIVSLAPEVL", - "output": "large ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MSQSYINVIGAGLAGSEAAYQIAKRGIPVKLYEMRGVKSTPQHKTADFAELVCSNSLRGDALTNAVGLLKEEMRRLDSVILKSAEATRVPAGGALAVDREGFSQMVTELVTNHPLIEVIREEITEIPNDDITVIATGPLTSDALAEKIHALNGGNGFYFYDAAAPIIDVNTIDMTKIYLKSRYDKGEAAYLNAPMTKQEFMDFHDALVNAEEAPLNSFEKEKYFEGCMPIEVMAKRGIKTMLYGPMKPVGLEYPDDYQGPRDGEYKTPYAVVQLRQDNAAGSLYNIVGFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLEQTFRSKKQPNLFFAGQMTGVEGYVESAASGLVAGINAARLFKGEEALVFPETTAIGSLPHYVTHADSKHFQPMNVNFGIIKELDGPRIRDKKERYEKIAERALQDLAPYLDK", - "output": "cytoplasm ; 5,10-methylenetetrahydrofolate-dependent tRNA (m5U54) methyltransferase activity ; flavin adenine dinucleotide binding ; methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase (FADH2-oxidizing) activity" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MSGKIIDKVKVFMGFDVFEDEEVEEEETVEIEDELVPVMNSKRNKVVNIHTTTQMKVVLYEPTNFEEAPNIVDNLKNRKPVIINLENIEPDLAKKFFDFLNGAIYALDGNIQKVSSGIFILAPNNVDISGNIKEELKNKGVFPWQK", - "output": "cytoplasm ; division septum assembly ; FtsZ-dependent cytokinesis" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MTSSSESTRKGLTKIATNRLQKEFMEWQTNPPSGFKHRVSDNLQRWIIEVHGVPGTLYANETYQLQVEFPEHYPMEAPQVIFQHPAPLHPHIYSNGHICLDVLYDSWSPAMRLSSICLSILSMLSSSSVKQKPKDNDHYLKNCKHGRSPKETRWRFHDDKV", - "output": "nucleus ; ATP binding ; ubiquitin conjugating enzyme activity ; protein polyubiquitination ; response to gibberellin" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MPTINQLVRKGRASETTKSKSPALQDCPQRRGVCTRVYTTTPKKPNSALRKVAKVRLTNGFEVISYIGGEGHNLQEHSVVLIRGGRVKDLPGVRYHMVRGSLDTQGVKDRRQARSKYGAKRAKAAK", - "output": "small ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; tRNA binding ; translation" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MKQYAIQPANLEFNAEGTPVSRDFDDVYFSNDNGLEETRYVFLGGNQLEERFPLHPRPLFVVAESGFGTGLNFLTLWQAFSQFRDAHPEATLQRLHFISFEKFPLTQADLALAHQHWPELAPWAQQLHAQWPLPLAGCHRLILDDGRVTLDLWFGDINELTGKLDESLNQKVDAWFLDGFAPAKNPDMWTQNLFSTMARLARPGGTLATFTSAGFVRRGLQEAGFTMQKRKGFGRKREMLCGVMAHALTFPSPTPWFTRSGSAKRDVAIIGGGIASALLSLALLRRGWQVTLYCSDEQPAQGASGNRQGALYPLLSKHDAAINLFFPSAFTFARRLYDALPVTFDHDWCGVTQLGWDEKSQHKIDQMLSLALPDALAVAVDPDQAQQETGVATHCRGITYPAGGWLCPAQLTAALLALAATQGLRRHYTHTLTALSRQATGWQLQFAEGKAVEHEVVVLANGHQINHVDQTRPLPVYSVAGQVSHIPTTPALSALRQVLCYDGYLTPQNPATHQHCIGASYHRGSEETAYREDDQQQNRQRLIDCFPDAAWAKEVDISEKAARCGVRCATRDHLPMVGNVPDYDATLAQYAALARQKDAAERAPVYPDLFMLGALGSRGLCSAPLCAEILAAQMSEEPIPMDADTLAALNPNRLWVRKLLKGKAVK", - "output": "cytoplasm ; flavin adenine dinucleotide binding ; oxidoreductase activity, acting on the CH-NH group of donors ; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity ; tRNA wobble base modification" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MHLLPELASHHAVSIPELLVSRDERQARQHVWLKRHPVPLVSFTVVAPGPIKDSEVTRRIFNHGVTALRALAAKQGWQIQEQAALVSASGPEGMLSIAAPARDLKLATIELEHSHPLGRLWDIDVLTPEGEILSRRDYSLPPRRCLLCEQSAAVCARGKTHQLTDLLNRMEALLNDVDACNVN", - "output": "holo-citrate lyase synthase activity ; prosthetic group biosynthetic process" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "KGSSGMMSMVAAAIAANRTKKGASAQAIRKYVAAHSSLKGAVLNFRLRRALAAGLKSGALAHPKGSAGWVLVPKK", - "output": "nucleosome ; nucleus ; DNA binding ; cell differentiation ; chromosome condensation ; nucleosome assembly ; spermatogenesis" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MERIKELRDLMSQSRTREILTKTTVDHMAIIKKYTSGRQEKNPALRMKWMMAMKYPITADKRIMEMIPERNEQGQTLWSKTNDAGSDRVMVSPLAVTWWNRNGPTTSTVHYPKVYKTYFEKIERLKHGTFGPVRFRNQVKIRRRVDINPGHADLSSKEAQDVIMEVVFPNEVGARILTSESQLTITKEKKEELQDCKIAPLMVAYMFERELVRKTRFLPVAGGTSSVYIEVLHLTQGTCWEQMYTPGGEVRNDDVDQSLIIAARNIVRRAAVSADPLASLLEMCHSTQIGGIRMVDILRQNPTEEQAVDICKAAMGLRISSSFSFGGFTFKRTSGSSVKREEEVLTGNLQTLKIRVHEGYEEFTMVGRRATAILRKATRRLIQLIVSGRDEQSIAEAIIVAMVFSQEDCMIKAVRGDLNFVNRANQRLNPMHQLLRHFQKDAKVLFQNWGIEPIDNVMGMVGILPDMTPNTEMSLRGVRVSKMGVDEYSSTERVVVSIDRFLRVRDQRGNVLLSPEEVSETQGTEKLTITYSSSMMWEINGPESVLVNTYQWIIRNWETVKIQWSQDPTMLYNKMEFEPFQSLVLKAARGQYSGFVRTLFQQMRDVLGTFDTVQIIKLLPFAAAPPEQSRMQFSSLTVNVRGSGMRILVRGNSPVFNYNKATKRLTVLGKDAGALTEDPNEGTAGVESAVLRGFLILAKEDKRYGPALSINELSNLAKGEKANVLIGQGDVVLVMKRKRDSSILTDSQTATKRIRMAIN", - "output": "host cell nucleus ; virion component ; RNA binding ; RNA-dependent RNA polymerase activity ; 7-methylguanosine mRNA capping ; cap snatching ; DNA-templated transcription ; suppression by virus of host mRNA transcription via inhibition of RNA polymerase II activity ; viral RNA genome replication" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKAGGVKVVKSKEEIRAFAEHWLGKRLVTYQTDANGQPVNQILVEAATDIDKELYLGAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKIAIDPLAGPMPYQGRELAFKLGLEGKQVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQPDLREMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVGGGATKERVTEAFKIILSDDNVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLEGNNAELGAKKLADSGLNIIAAKSLTDAAQQVVAAVEGK", - "output": "cytoplasm ; ATP binding ; magnesium ion binding ; succinate-CoA ligase (ADP-forming) activity ; succinate-CoA ligase (GDP-forming) activity ; tricarboxylic acid cycle" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MTTYSLRLKAKNELTPHPTAQYWRKCQVEELFDLPFMDLVFRAAEIHRQHFDPNAIQLSTLLSIKTGGCAEDCEYCPQSARYDTGVEKQSMLDVNYIVEKAQIAKARGASRFCMGAAWRGPKPKDIETVSAIIKAVKSLGLETCGTFGMLEEGMAEDLKEAGLDYYNHNLDTDPERYHQVIHTRSHDDRMDTLGKVRSAGLKICCGGIVGMNETRAERAGLIASLANLDPQPESVPINQLVKVAGTPLENAEDLDWTEFVRTIAVARITMPKSYVRLSAGRSNMPEAMQALCFMAGANSIFYGDKLLTTENPEEDGDRVLMEKLNLYPLSCSNVE", - "output": "2 iron, 2 sulfur cluster binding ; 4 iron, 4 sulfur cluster binding ; biotin synthase activity ; iron ion binding ; biotin biosynthetic process" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MNPEEAMRPLLMASEMMMFGAGLVALIAGSFLRRQRQWWVGVMAAAAQVGVIGVAVVQMVGPDQMAFEGAFSVDTATGVARIACAAGLLLIWAVAGAEMRASPREAETYALLMFSATGVLVLAGAEDLLLLVAGYFLASIPLYGLVGLARSAAAAEAAMKAYLMGALFGILLMLGVTILYGLTGATRYPQLAMTLSGAPAVAVAAGVVGVLAGLMFEAGGVPAHFWVPDAAQGANATAATFLTTVPKIGALVALYRLTTVLPDTLAWPVLIAVFAVISMTLGNLAAYWQQDPRRLLGWSTVSQVGYLLVPITVAGASELALPSLLFYLGGYTVTNIAAFAVTAALPGRRDLDSYRGLARTRPWLAAALVVALLGLVGTPPTAVFIGKVTTAAAAWDGRYAWLAVVVFVNTLVSLFYYLRWIIPAFGRPHETGDADQSAVQHWPARVAVLAAALSLLLGIIAGPVWQLVT", - "output": "plasma membrane ; NADH dehydrogenase (ubiquinone) activity ; quinone binding ; ATP synthesis coupled electron transport" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MKVGFVGWRGMVGSVLMQRMKEENDFAHIPEAFFFTTSNVGGAAPDFGQAAKTLLDANDVAELAKMDIIVTCQGGDYTKSVFQPLRDSGWNGYWVDAASSLRMKDDAIIVLDPVNRNVIDNGLKNGVKNYIGGNCTVSLMLMALGGLFQNDLVEWATSMTYQAASGAGAKNMRELISGMGAIHAKVADELADPSSAILDIDRKVSDFLRSEDYPKANFGVPLAGSLIPWIDVDLGNGQSKEEWKGGVETNKILGRSDNPTVIDGLCVRIGSMRCHSQALTLKLKKDLPVSEIEAILAGANDWVKVIPNEKEASIHELTPAKVTGTLSVPVGRIRKLEMGGEYISAFTVGDQLLWGAAEPLRRVLRIVLGSL", - "output": "aspartate-semialdehyde dehydrogenase activity ; NAD binding ; NADP binding ; protein dimerization activity ; 'de novo' L-methionine biosynthetic process ; diaminopimelate biosynthetic process ; isoleucine biosynthetic process ; lysine biosynthetic process via diaminopimelate ; threonine biosynthetic process" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MAARAQAWLFAAALVIFHGSEYVLAAAFHGRRNVTATSLLISKQYVLAMSFAMLEHLTEALLFPELKEYWFVSYVGLVMVIIGEVIRKLAVVTAGRSFTHVIRIHYEDQHKLITHGVYRLMRHPGYSGFLIWAVGTQVMLCNPLSTVAFTLVLWRFFSKRIPYEEFFLRQFFGREYEEYAQKVHSGLPFIE", - "output": "endoplasmic reticulum ; endoplasmic reticulum membrane ; protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity ; C-terminal protein methylation" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MRVLLQLGLLALGAVCVCAIPKQSATLRALVRETLTLLSTHRTLLKGNETLRISVPAHKNHQLCIEEIFQGIDTLKNQTTQGEALATLFQNLSLIKKHIDLQKQKCGEERRRVKQFLDYLQEFLAVINTEWTIEG", - "output": "extracellular space ; cytokine activity ; growth factor activity ; interleukin-5 receptor binding ; immune response ; interleukin-5-mediated signaling pathway ; peptidyl-tyrosine phosphorylation ; positive regulation of DNA-binding transcription factor activity ; positive regulation of DNA-templated transcription ; positive regulation of immunoglobulin production ; positive regulation of peptidyl-tyrosine phosphorylation ; positive regulation of podosome assembly" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MHPRFQTAFAQLADNLQSALAPILADHHFPAMLTAEQVSTLKNTAGLDEDALAFALLPLAAACARTDLSHFNVGAIARGVSGNWYFGANMEFLGATMQQTVHAEQSAISHAWLRGEKGLAAVTVNYTPCGHCRQFMNELNSGLDLRIHLPGRAPHTLRDYLPDAFGPKDLEIKTLLMDEQDHGFTLTGDTLTQAAITAANKSHMPYSHSPSGVALECKDGRIFTGSYAENAAFNPTLPPLQGALNLLSLNGYDYADIQRAILAEKGDAALIQWDATAATLKALGCHNIDRVLLG", - "output": "cytidine deaminase activity ; deoxycytidine deaminase activity ; zinc ion binding" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MQRCSVVAALAGVVFLAQACSLSTPSRITHTDKLPVVVTFNALKELTQMVGGEKIHLVSIVPDGVDSHDFEPKAKHMAFISDAKVIVYNGLGMEPWIHSVLHAARNSGSIRVEAAQGIVPLKAHTRGHTAHHVHAHASHGSAYDPHVWLSVCNAQTMLRTIGKALCKADPQHTRFYKRNARNAAARLEALYKEYRSKFAALSHRYFVTTHAAFGYLCRDFDLQQKSIKDVFNTEEPSIKRLVELVEFSKKHSVRTIFSERGPSEKVARVLAQEIGASVETIYTMEKNEENLSYYERMKHNINRIYRACSKQVTPSQ", - "output": "periplasmic space ; metal ion binding ; cell adhesion ; metal ion transport" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MADTVLNSAPSKAAPRISFVSLGCPKALVDSERIVTRLRAEGYELTKTHQGADLVVVNTCGFLDSAKAESLNAIGEALAENGKVVVTGCMGAEPEQIREVHPSVLAITGPQQYESVLAAVHEAVPPAHDPFLDLVPAEGVKLTPRHYAYLKISEGCSNRCTFCIIPKLRGDLVSRPAGDVLREAERLVKAGVKELLVISQDTSAYGVDLRYATSPWGDKEVAARFLDLAGALGDLGAWVRLHYVYPYPHVDAVMELMAAGKVLPYLDIPFQHASPTVLKRMKRPASQEKTLARIQAWRAAVPDLTLRSTFIVGFPGETEAEFEELLGFLEEAEIDRAGCFKFEPVRGADANALENPVPDAVKAERYDRFMRTQQKVSARRLKRKVGTRQSVIIDTVTPDGGIGRTKGDAPEIDGTVKVFARRPLRVGEIATVKIEAAGPYDLSGTAVGF", - "output": "cytoplasm ; 4 iron, 4 sulfur cluster binding ; metal ion binding ; protein methylthiotransferase activity ; peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid ; tRNA modification" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MSYNFTDPYEIARFIKEVKKSTPVKVYLKGNLEGVELGSIECYGNNDFYVLFGESDEVATFLTENKDKIVSFRLENDRRNSAIPMLELLNINARIEPGAIIRDRVSIGDNAVIMMGAVINIGAEIGESTMVDMNAVIGARGKLGKRVHLGAGAVVAGVLEPPSKTPCIIEDDVLIGANAVILEGVKIGKGSVVAAGSVVVEDVPAGVVVAGTPAKIIKSVDEKTKDKTEILDDLRK", - "output": "tetrahydrodipicolinate N-acetyltransferase activity ; diaminopimelate biosynthetic process ; lysine biosynthetic process via diaminopimelate" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MFLLDANVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLATNRRIFEIPSPRAEAFAFVEAVTAQPHHLPTNPGPRHLMLLRKLCDEADASGDLIPDAVLAAIAVGHHCAVVSLDRDFARFASVRHIRPPL", - "output": "magnesium ion binding ; ribonuclease activity ; negative regulation of growth" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MARKPDISAVPVESAACQGPDPRRWWGLVVILAAQLLVVLDGTVVNIALPSVQRDLGMSDTSRQWVITAYTLAFGGLLLLGGRVADAFGRRRIFAVGILGFGLASLLGGAAPDPGTLFLARALQGVFAAALAPAALALINTLFTEPGERGKAFGVYGAVSGGGAAVGLLAGGLLTEYLDWRWCLYVNAPVALLALLGCRLLPRDRRTGRAVRLDLPGTLLGCGGLVAIVYAFAEAESGWGDPLVVRLLVLGVLMLVAFALVERRVQDPLLPPGVVAHRVRGGSFLVVGLPQIGLFGLFLFLTYYLQGILDYSPVLTGVAFLPLGLGIAVGSSLIAARLLPRTRPRTLIVGALLAAAAGMALLTRLEPDTPQVYLTHLLPAQILIGLGIGCMMMPAMHTATARVAPHEAGAAAAVVNSAQQVGGALGVALLNTVSTGATAAYLADHGTSPAATVDGTVHGYTVAIAFAVGVLLLTAVLAWVLIDSRTEAADETGSASVTPARPR", - "output": "plasma membrane ; transmembrane transporter activity ; antibiotic biosynthetic process ; response to antibiotic" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MQTVLIALLRFYKLAVSPLLGSRCRFYPSCSDYAREAIQYHGAARGTYLAARRLCRCHPFSAGGVDLVPPPNSDARNAPHEAEASSHRL", - "output": "plasma membrane" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MNNPSTPKAPLADYLAHLPLAEEERARLGESASFSELHARLAGEGAASEAGGDPALASVRARLQLGSPELDDAEMFGVDAQGRTFLKISPPIRRTKVIPEPWRTNILVRGWRRLTGRSNPPKPKRALPRARWQRVGSLRRFILLLLMLAQTSVATYYMKGILPYQGWAFVDLEELTRQSLLDTVQQVLPYVIQFGILALFAILFCWVSAGFWTALMGFWELLTGRDRYRISGSSAGSEPIAADARTAIVMPICNEDVPRVFAGLRATVESMAATGEMERFDFFVLSDTNDPDIAVAEQQAWLELCRETRGFGKIFYRRRRRRVKRKSGNIDDFCRRWGGDYRYMVVMDADSVMSGDCLAKLVRLMEANPEAGIIQTAPKASGMDTLYARMQQFATRVYGPLFTAGLHFWQLGESHYWGHNAIIRMQPFIDHCALAPLPGKGSFAGAILSHDFVEAALMRRAGWGVWIAYDLDGSYEELPPNLLDELKRDRRWCHGNLMNFRLFLVKGMHPVHRAVFLTGVMSYLSAPLWFFFLVLSTALLAVHQLMEPQYFLEPRQLFPIWPQWHPEKAIALFSTTLTLLFLPKLLSVMLIWAKGAKGFGGVIRVTLSMLLEMFFSVLLAPVRMLFHTRFVLAAFLGWSVQWNSPQRDDDATPWSEAIRRHGMQTLLGLAWTLLVAWLNPRFLWWLSPIVGSLMLSIPVSVISSRVKLGLRARDEKLFLIPEEYDTPRELRATDEYTYENRWHALKDGFLKAAVDPLLNALACAMGTARHNRAQAIETVRGERIGKAIEKGPEQLDGATRLALLSDPVALSRLHAQVWEENRDDWLGRWRKAEADDPHAASVPLAQVVPGDAGLLPAAQS", - "output": "plasma membrane ; hexosyltransferase activity ; glucan biosynthetic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MSGEDDFYLFQNISSVGPWDGPQYHLAPVWAFRLQAAFMGFVFFVGTPLNAIVLVATLHYKKLRQPLNYILVNVSLGGFLFCIFSVFTVFIASCHGYFLFGRHVCALEAFLGSVAGLVTGWSLAFLAFERYVVICKPFGSIRFNSKHALMVVLATWIIGIGVSIPPFFGWSRFIPEGLQCSCGPDWYTVGTKYRSEYYTWFLFIFCFIIPLSLICFSYSQLLRTLRAVAAQQQESATTQKAEREVSHMVVVMVGSFCLCYVPYAALAMYMVNNRNHGLDLRLVTIPAFFSKSSCVYNPIIYCFMNKQFRACILEMVCRKPMADESDVSGSQKTEVSTVSSSKVGPH", - "output": "cell body ; cone photoreceptor outer segment ; cytosol ; intercellular bridge ; nucleoplasm ; perinuclear region of cytoplasm ; photoreceptor inner segment ; photoreceptor outer segment ; plasma membrane ; terminal bouton ; G protein-coupled receptor activity ; photoreceptor activity ; cellular response to UV-A ; G protein-coupled receptor signaling pathway ; phototransduction ; visual perception" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MKYVGAHVSAAGGVENAPLAAARIRARAFALFTKNQRQWRAAPLKEESITAFKRNCADHGYRPDHILPHDSYLINLGHPEADNLKKSRTAFFDEMKRCEQLGLKFLNFHPGSHLGKISEDACLSRIAESVNMALDRTASVCAVIENTAGQGTNLGHRFEHLARVIDQVEDKTRVGVCLDTCHTFAAGYDLRTASTYEATLKAFDRVVGLKYLRAVHLNDSIKGLASRVDRHQSLGQGALGLDVFRRIMNDRRFENMPLILETKDATIWEQEIKLLYGMIKGAK", - "output": "deoxyribonuclease IV (phage-T4-induced) activity ; DNA binding ; zinc ion binding ; DNA repair" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MKPAARETRTPPRSPGLRWALLPLLLLLRQGQVLCAGAAPNPIFDIEAVVSPTSVLLTWKHNDSGASECRIENKMESNLTFPVKNQTSCNITGLSPGTSYTFSIISVTTNETLNKTITTEPWPVSDLHVTSVGVTQARLTWSNANGTASYRMLIEELTTHSSVNISGLKPGTNNSFAFPESNETQADFAVAEEVPDANGTKRIPVTNLSQLHKNSLVSVDPPSGQDPSLTEILLTDLKPDTQYNATIYSQAANGTEGQPRNKVFKTNSTQVSDVRAMNISASSMTLTWKSNYDGSRTSIVYKIHVAGGTHSVNQTVNKTEAIILGLSSSTLYNITVHPFLGQTEGTPGFLQVYTSPDQVSDFRVTNVSTRAIGLAWRSNDSKSFEIFIKQDGGEKHRNASTGNQSYMVEDLKPGTSYHFEIIPRGPDGTEGLSSTVNGSTDPSAVTDIRVVNISTTEMQLEWQNTDDASGYTYHLVLESKSGSIIRTNSSQKWITVGSLTPGTLYNVTIFPEVDQIQGISNSITQYTRPSSVSHIEVNTTTTTAAIRWKNEDAASASYAYSVLILKTGDGSNVTSNFTKDPSILIPELIPGVSYTVKILTQVGDGTTSLVPGWNLFCTEPEPVTSFHCEVVPKEPALVLKWACPFGMYTGFELGVRSDSWDNMTRLENCTSDDDTECRTEVAYLNFSTSYNISIATLSCGKMALPAQNICTTGITDPPTPDGSPNITSVSHNSVKVKFSGFEASHGPIKAYAVILTTGEAAQPSADVLKYTYEDFKRGASDTYVTYLIRIEEKGQSQGLSEVLNYEIDVGNQSTTLGYYNGRLEPLGSYRACVAGFTNITYNLQNDGLINGDESYVSFSPYSEAVFLPQDPGVICGAVFGCIFGALAITAVGGFIFWRKKRTDAKNNEVSFSQIKPKKSKLIRVENFEAYFKKQQADSNCGFAEEYEDLKLIGISLPKYTAEIAENRGKNRYNNVLPYDISRVKLSVQTHSTDDYINANYMPGYHSKKDFIATQGPLPNTLKDFWRMVWEKNVYAIVMLTKCVEQGRTKCEEYWPSKQAQDYGDITVAMTSEVVLPEWTIRDFVVKNMQNSESHPLRQFHFTSWPDHGVPDTTDLLINFRYLVRDYMKQIPPESPILVHCSAGVGRTGTFIAIDRLIYQIENENTVDVYGIVYDLRMHRPLMVQTEDQYVFLNQCVLDIIRAQKDSKVDLIYQNTTAMTIYENLEPVSMFGKTNGYIA", - "output": "cell surface ; cell-cell junction ; immunological synapse ; plasma membrane ; ruffle membrane ; beta-catenin binding ; cadherin binding ; delta-catenin binding ; gamma-catenin binding ; mitogen-activated protein kinase binding ; phosphatase activity ; platelet-derived growth factor receptor binding ; protein kinase binding ; protein tyrosine phosphatase activity ; B cell differentiation ; blood coagulation ; calcium-mediated signaling using intracellular calcium source ; glucose homeostasis ; heart development ; negative regulation of cell growth ; negative regulation of cell migration ; negative regulation of cell population proliferation ; negative regulation of epidermal growth factor receptor signaling pathway ; negative regulation of insulin receptor signaling pathway ; negative regulation of MAP kinase activity ; negative regulation of platelet-derived growth factor receptor signaling pathway ; negative regulation of protein kinase B signaling ; negative regulation of signaling receptor activity ; negative regulation of T cell receptor signaling pathway ; negative regulation of vascular permeability ; oligodendrocyte differentiation ; peptidyl-tyrosine dephosphorylation ; peptidyl-tyrosine dephosphorylation involved in inactivation of protein kinase activity ; platelet-derived growth factor receptor signaling pathway ; positive chemotaxis ; positive regulation of cell adhesion ; positive regulation of cell-matrix adhesion ; positive regulation of Fc-gamma receptor signaling pathway involved in phagocytosis ; positive regulation of focal adhesion assembly ; positive regulation of macrophage chemotaxis ; positive regulation of MAPK cascade ; positive regulation of peptidyl-tyrosine phosphorylation ; positive regulation of platelet activation ; positive regulation of protein kinase B signaling ; positive regulation of tumor necrosis factor production ; protein dephosphorylation ; regulation of cell adhesion ; vasculogenesis" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MEEEERPRKIQKLGSSEAHESEPLITGAIKGSQDDTSPAEQTNSQKAIPGATTDNSKESEEPASSTATDGPETTEQKISKRQLRRQAKLEQWEAKREERKIIRKQKTAARKERRRELWEEAKREGKDPNEELNKLFPMTTRTRHRKSTRLPLTLIIDCGFDDLMQDKERVSLGQQLTRSYSENNKSAFNGHLIISSFNKKLKERFETVLHKTHEGWKGVRFTGEDWLQAAKEASEVMQGPNGGKLVGPFEDKTDAKPEDGEIVYLTSDSSETLTELKPYSTYIIGGLVDKNRHKGICHKRATELGIRTAKLPIGQYIQMNSRPVLATNHVVEIMVRWLQLRDWAEAFMQTLPPRKGGALKDSVKGQRDSTPRDDVESNTEKGTVSETVEDTEATEPAEAVTPKDIDAVQENKQDE", - "output": "cytoplasm ; nucleus ; tRNA (guanine(9)-N(1))-methyltransferase activity ; tRNA (guanine-N1-)-methyltransferase activity ; tRNA binding ; tRNA N1-guanine methylation" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MKRIAVLTSGGDAPGMNAAIRAVVRKAISEGMEVYGINRGYAGMVDGDIFPLGSKEVGDKISRGGTFLYSARYPEFAQLEGQLAGIEQLKKHGIEGVVVIGGDGSYHGAMRLTEHGFPAVGIPGTIDNDIAGTDYTIGFDTAVNTAVEAIDKLRDTSSSHGRTFVVEVMGRNAGDIALWAGIASGADQIIVPEEEFDIEKVASTIQYDFEHKGKNHHIIVLAEGVMSGEAFAQKLKEAGDKSDLRVTNLGHILRGGSPTARDRVIASWMGSHAVELLKEGKGGLAVGIHNEELVESPILGTAEEGALFSLTEEGKIIVNNPHKARLDFAALNRSLSQ", - "output": "cytoplasm ; 6-phosphofructokinase activity ; ATP binding ; metal ion binding ; fructose 6-phosphate metabolic process" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MRLLDDLQAGLAAIDAAHLRRVRRTAYSPTDRSQRISVPGEAPRDILGFCGNDYLGLAAHPALVEAMTQGTQQYGFGSGASHLVSGHSIAHARLEARMAALQGEHIPEADALFFCTGYMANLAVVSAMAQAGGIRPAEECTIFSDALNHASLIDGARLSRAPIKVYPHVDLAALEALLAASTSRNKLIVTDGVFSMDGDIAPLPELLALAERYDAWLIVDDAHGLGVLGENGAGVLSHFGLHSQRIIYVGTFGKAAGGSGAAIVGHRLVIDWLVQRARTYIFTTATPPGIACAVEAALDLIASEEGDERRARLDRHIAVWSAHAQRLAARFGWQWMPSPTAIQPIVIGENAPALALAAALEHEGIRIAAIRPPTVPAGTARLRITLSAAHTDADIERLAQALEAAGQSLQPAKAA", - "output": "8-amino-7-oxononanoate synthase activity ; pyridoxal phosphate binding ; biotin biosynthetic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MQPPPMRERQRWRPEEDAILLAYVRQYGPREWSLVSQRMNRPLHRDAKSCLERWKNYLRPGIKKGSLTDDEQRLVIRLQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQRELRDRDRRRLPPPLDGDERGCAGGRYDWLLEDFADKLVNDHHRRMMAAPILPPWMSSSPSSSSSPSVTLSLASAAVAPAPAAPPPTWGGGGGGEVVVAELMECCREMEEGQRAWAAHRKEAAWRMKRVEMQLETERACRRREATEEFEAKMRALREEQAAAVERVEAEYREKMAGLRRDAEAKEQKMAEQWAAKHARLAKFLDQVAACRRWPPVEINGGGGGGPGGGR", - "output": "nucleus ; DNA binding" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MTTYGSFPGARPRRLRTTPVMRRMVAETRLHPADFILPAFVREGVSEPVPIAAMPGVVQHTRDTLKKAAAEAVEAGVSGIMLFGVPEDGKKDAAGTAGTDPDGILQVALRDVRAEVGDELLVMSDLCLDEFTDHGHCGVLDGQGRVDNDATLERYAEMAQVQADAGAHVVGPSGMMDGQIGVIRDALDQIGREDVAILAYTAKYASAFYGPFREAVGSSLKGDRKTYQQDSANARESLRELALDLEEGADMVMVKPAGPYLDILAKVAEASDVPVAAYQISGEYSMIEAAAEKGWIDRDRAILESLTGIKRAGARNILTYWATEVARTLR", - "output": "cytosol ; porphobilinogen synthase activity ; zinc ion binding ; heme biosynthetic process ; protoporphyrinogen IX biosynthetic process" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MDASKSKALEAALSQIDRQFGKGTVMRLGDKGREKMPAISTGSLGLDVALGIGGLPKGRIVEIYGPESSGKTTLTLQVIAEAQRQGGTCAFVDAEHALDPVYAEKLGVNVDDLIISQPDNGEQALEVADMLVRSGAVDVLVVDSVAALTPKAEIEGDMGDHHVGLQARLMSQALRKITGNIKNANCLAIFINQIRMKIGVMFGNPETTTGGNALKFYSSVRLDIRRIGSVKEGDEVVGSDTRVKVVKNKVAPPFKQAEFQILYGQGINRLGEIVDFGVKLGLIDKAGAWYSYNGDKIGQGKANAMQYLRDNKEVAEFLEQKIKAELLGDIKPVAKEGAEVEEESAEQE", - "output": "cytoplasm ; ATP binding ; ATP-dependent DNA damage sensor activity ; damaged DNA binding ; single-stranded DNA binding ; DNA recombination ; DNA repair ; SOS response" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MSTEYRTGREGEFTYRGHDLDELQEMSLEDVAELLPARQRRTITRGLSEEHHKVLAEARESGTEETANNPIRTHLRDMPVLPEFVGLTFAVYTGQEFERVEVQPEMIGHYLGEFQLTRSSVEHGQAGIGATRSSKFVPLK", - "output": "cytosolic small ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; ribosomal small subunit assembly ; translation" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MKFELDTTDGRARRGRLVFERGTVETPAFMPVGTYGTVKGMTPEEVRATGADILLGNTFHLWLRPGEEIMRKHGDLHDFMNWQRPILTDSGGFQVFSLGDIRKITEEGVHFRSPINGEKIFMDAEKSMQIQYSLGSDVVMIFDECTPYPATHDEARKSMQMSLRWAQRSRDEFDRLENPNSLFGIIQGSVYEDLRDESLKGLLEIGYDGYAVGGLAVGEPKEDMHRILEHVCPQIPADKPRYLMGVGKPEDLVEGVRRGVDMFDCVMPTRNARNGHLFTSEGVIKIRNARHRDDTSPLDAKCDCYTCKNYSRAYLYHLDRCNEILGARLNTIHNLRYYQMLMEGLRGAIETGTLDAFVEEFYTSQGREVPKLSD", - "output": "metal ion binding ; queuine tRNA-ribosyltransferase activity ; queuosine biosynthetic process ; tRNA-guanine transglycosylation" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIYRLSDQPVLSVQRRAKYLLLELPEGWIIIHLGMSGSLRILPEELPPEKHDHVDLVMSNGKVLRYTDPRRFGAWLWTKELEGHNVLTHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKLVVGVGNIYASESLFAAGIHPDRLASSLSLAECELLARVIKAVLLRSIEQGGTTLKDFLQSDGKPGYFAQELQVYGRKGEPCRVCGTPIVATKHAQRATFYCRQCQK", - "output": "class I DNA-(apurinic or apyrimidinic site) endonuclease activity ; damaged DNA binding ; oxidized purine nucleobase lesion DNA N-glycosylase activity ; zinc ion binding ; base-excision repair" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MSGRPRTTSFAESCKPVQQPSAFGSMKVSRDKDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHARIQAAASTPTNATAASDANTGDRGQTNNAASASASNST", - "output": "axon ; beta-catenin destruction complex ; centrosome ; cytoplasm ; cytosol ; dendrite ; glutamatergic synapse ; mitochondrion ; nucleoplasm ; nucleus ; plasma membrane ; postsynapse ; presynapse ; Wnt signalosome ; ATP binding ; beta-catenin binding ; dynactin binding ; kinase activity ; NF-kappaB binding ; p53 binding ; protease binding ; protein kinase A catalytic subunit binding ; protein kinase activity ; protein kinase binding ; protein serine kinase activity ; protein serine/threonine kinase activity ; RNA polymerase II-specific DNA-binding transcription factor binding ; tau protein binding ; tau-protein kinase activity ; ubiquitin protein ligase binding ; beta-catenin destruction complex disassembly ; cellular response to amyloid-beta ; cellular response to interleukin-3 ; cellular response to retinoic acid ; circadian rhythm ; dopamine receptor signaling pathway ; epithelial to mesenchymal transition ; ER overload response ; establishment of cell polarity ; excitatory postsynaptic potential ; extrinsic apoptotic signaling pathway ; extrinsic apoptotic signaling pathway in absence of ligand ; glycogen metabolic process ; heart valve development ; hippocampus development ; insulin receptor signaling pathway ; intracellular signal transduction ; maintenance of cell polarity ; negative regulation of apoptotic process ; negative regulation of calcineurin-NFAT signaling cascade ; negative regulation of canonical Wnt signaling pathway ; negative regulation of canonical Wnt signaling pathway involved in osteoblast differentiation ; negative regulation of dopaminergic neuron differentiation ; negative regulation of extrinsic apoptotic signaling pathway via death domain receptors ; negative regulation of gene expression ; negative regulation of glycogen (starch) synthase activity ; negative regulation of glycogen biosynthetic process ; negative regulation of mesenchymal stem cell differentiation ; negative regulation of neuron death ; negative regulation of phosphoprotein phosphatase activity ; negative regulation of protein acetylation ; negative regulation of protein binding ; negative regulation of protein localization to nucleus ; negative regulation of protein-containing complex assembly ; negative regulation of type B pancreatic cell development ; neuron projection development ; neuron projection organization ; peptidyl-serine phosphorylation ; peptidyl-threonine phosphorylation ; positive regulation of autophagy ; positive regulation of cell differentiation ; positive regulation of cell-matrix adhesion ; positive regulation of cilium assembly ; positive regulation of gene expression ; positive regulation of GTPase activity ; positive regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway ; positive regulation of mitochondrion organization ; positive regulation of neuron death ; positive regulation of proteasomal ubiquitin-dependent protein catabolic process ; positive regulation of protein binding ; positive regulation of protein catabolic process ; positive regulation of protein export from nucleus ; positive regulation of protein localization to centrosome ; positive regulation of protein localization to cilium ; positive regulation of protein ubiquitination ; positive regulation of protein-containing complex assembly ; presynaptic modulation of chemical synaptic transmission ; proteasome-mediated ubiquitin-dependent protein catabolic process ; protein autophosphorylation ; protein phosphorylation ; regulation of axon extension ; regulation of axonogenesis ; regulation of cellular response to heat ; regulation of circadian rhythm ; regulation of dendrite morphogenesis ; regulation of long-term synaptic potentiation ; regulation of microtubule anchoring at centrosome ; regulation of microtubule cytoskeleton organization ; regulation of microtubule-based process ; regulation of neuron projection development ; regulation of protein export from nucleus ; superior temporal gyrus development ; viral protein processing" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MPVNNKDINILGIETSCDETSAAVLRNGCELLSHIISSQIKTHQKYGGVVPEVASREHILHLQSVVEQALQEAKMGFGDLAGIAVTYGPGLVGSLLVGVAGAKAMAYGAGIPLLGVNHLEGHIYANFLHNPGLKFPLLALLVSGGHSHLVYFEGHGKYQVLGQTRDDAAGEALDKVARTLGLGYPGGPYIQKAALEGNPHAYEFPRAMLEPGSLDFSFSGVKSAVLNTLNSARMKGETVNVADVAASFQEAIVDVLVRKTLLALARTKAPTLVLAGGVAANTLLRERLTEATQKRGIAFSYPPPILCTDNGAMIATAGYYRYLDKDYAPWNLNAIPGLNLA", - "output": "cytoplasm ; iron ion binding ; N(6)-L-threonylcarbamoyladenine synthase activity ; tRNA threonylcarbamoyladenosine modification" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MATLIPVNGGHPAASGQSSNVEATYEDMFKEITRKLYGEETGNGLHTLGTPVAQVATSGPTAVPEGEQRSFTNLQQLDRSAAPSIEYESSAAGASGNNVATTQANVIQQQQQQQQQAESGNSVVVTASSGATVVPAPSVAAVGGFKSEDHLSTAFGLAALMQNGFAAGQAGLLKAGEQQQRWAQDGSGLVAAAAAEPQLVQWTSGGKLQSYAHVNQQQQQQQQPHQSTPKSKKHRQEHAAELIYASPSTSANAAQNLAQSTPTSAPSNSSGGSTSSSGGGGGRKKAAQAAAAAAAANGVHIQKRYACTHCPYSTDRRDLYTRHENIHKDEKPFQCYACLKQFNRADHVKKHFLRMHRELQYDINKTRRHVSAGSGSSGSGSSGSGSHHSGGRGNVTINSAGVNIDNAFLEAQRHPTSSSMSIVETIEAVASATDMPLAQLKQEKMDDGAGVVLPLHVGVMQQPVASSSSGSSGSHGGNGNGGSGSGLLKPKREKRFTCCYCPWSGADKWGLKRHLNTHTKPFVCLLCDYKAARSERLATHVLKVHNKRACSKCSYLADTQEEYQAHMSDVHGNVGNANGGGGAVTIYTTTTNEGVAGGGGGGGGGISGNISGGGPLQEIIVNPSSMVGWRLSANGSLIPPHDLLTGGLPNAATQKRGSERLFQYLEAEGSDPEDYARLLKMDAISRNTASVAQDFHKAGGVHELKIPANHQLLFNNKLPSQWTTREAAALLYSLSNMGGGSASSVSGSQRQKFGMRARQHSTGEDDENTPSSASSSSFSGDEFNMSATSPLKLSRHAIKLEKMDEMDAKDMGPTKAMMATAFLEAANYEQTAIELLASKRKIKVENDNDEDQENQQHQPHQQHHSQQQQQQRLQLIKSSPAYKLNNNNNNNSNNNNYYKDKTSHRNAVHHHRQDDKENNKTKSPGTAAVSVAAAAATSPPSISGPSNQTPFLTQMEYQNLNRIGTQFQNYVKDIINKYYAAETPLMLAAAAAALPTATTTGQQQQPELDIENLSPSKRRRLLSETEEYIEYLRNKEDITLTIAPKVQPPAPVTSLLKRQLDLSTPRRSPKKAAPAHSNSASNASRKSLNQLATLLPLLADAASQQEYLAAPLDFSKKSSSRKQAQPKKIRLTPEAVVTLLRDKYLNRMVRQRLGCLKCNQLRKNSSISFNYHTLGSLALHKYWRHGRLGSSSTRREKLQAALQKRISRGQADKC", - "output": "nucleus ; DNA-binding transcription factor activity, RNA polymerase II-specific ; DNA-binding transcription repressor activity, RNA polymerase II-specific ; metal ion binding ; RNA polymerase II transcription regulatory region sequence-specific DNA binding ; sequence-specific DNA binding ; dendrite morphogenesis ; embryonic development via the syncytial blastoderm ; eye development ; larval somatic muscle development ; negative regulation of compound eye cone cell fate specification ; negative regulation of transcription by RNA polymerase II ; peripheral nervous system development ; positive regulation of transcription by RNA polymerase II ; progression of morphogenetic furrow involved in compound eye morphogenesis ; regulation of transcription by RNA polymerase II ; sensory organ development" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MSIVKVRNIFLIGPMGAGKSTIGRALAKELKLEFYDSDEVIEERAGADISWIFDIEGEEGFRRREQKVIDELTQKTNIVLATGGGVVITPENRNALAGRGTVIYLKTSLQQQFERTKRDTKRPLLQTEDLEGRLESLRDEREPFYDELADVSFETDKLTVKAVANNIIKYLYGEV", - "output": "cytoplasm ; ATP binding ; magnesium ion binding ; shikimate kinase activity ; amino acid biosynthetic process ; aromatic amino acid family biosynthetic process ; chorismate biosynthetic process ; phosphorylation" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MSNNSRHYSAIDEAILQGQAMLETLFGKPVAQRENPAKGLSQPALTSAEKKQSIGFMRVNHSGEVCAQALYHGQMATAKNPAVRALFTTAAKEETDHLAWCQERLEELGGHTSYLNAFWYTNSFLIGLLAGLSGDPLSLGFVEETEKQVEIHLADHLRKIPSSDLKSRKIVEYMQQDEIQHGLNARSSGAKELPYLVKKLMAFHAKVMTTLAYWI", - "output": "plasma membrane ; 3-demethoxyubiquinol 3-hydroxylase activity ; metal ion binding ; ubiquinone biosynthetic process" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MKKTVIASSLAVALGVTGYALTTDNSAHASESTTNYAQLANLAQNNPSELNAHPVQAGAYNITFVKDGFKYNFTSDGQSWSWNYTYVGGADTVATTQAAPAAQSTDYSASYSNEASTQSVSSNQQSSNTNVEAVSAPKTTSYSASTSSSSSASTGGSVKEQFLANGGTEAAWNAIVMPESGGNPNAVNPAGYRGLGQTKESWGTGSVASQTKGMINYANSRYGSLDAAIAFRDNHGWW", - "output": "extracellular region ; hydrolase activity, acting on glycosyl bonds ; metabolic process" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MKMMNGEDANDQMIKESFFITHGNPILTVEDTHPLRPFFETWREKIFSKKPKAILIISGHWETVKPTVNAVHINDTIHDFDDYPAAMYQFKYPAPGEPELARKVEEILKKSGFETAETDQKRGLDHGAWVPLMLMYPEADIPVCQLSVQPHLDGTYHYNLGRALAPLKNDGVLIIGSGSATHPLDETPHYFDGVAPWAAAFDSWLRKALINGRFEEVNIYESKAPNWKLAHPFPEHFYPLHVVLGAAGEKWKAELIHSSWDHGTLCHGSYKFTSA", - "output": "ferrous iron binding ; stizolobate synthase activity ; zinc ion binding ; cellular aromatic compound metabolic process" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MNHDFQALALESRGMGELLPTKKFWEPDDSTKDGQKGIFLGDDEWRETAWGASHHSMSQPIMVQRRSGQGFHGNSEVNAILSPRSESGGLGVSMVEYVLSSSPADKLDSRFRKGNFGTRDAETDGPEKGDQKGKASPFEEDQNRDLKQGDDDDSKINGRGLPNGMDADCKDFNRTPGSRQASPTEVVERLGPNTNPSEGLGPLPNPTANKPLVEEFSNPETQNLDAMEQVGLESLQFDYPGNQVPMDSSGATVGLFDYNSQQQLFQRTNALTVQQLTAAQQQQYALAAAQQPHIAGVFSAGLAPAAFVPNPYIISAAPPGTDPYTAAGLAAAATLAGPAVVPPQYYGVPWGVYPANLFQQQAAAAANNTASQQAASQAQPGQQQVLRAGAGQRPLTPNQGQQGQQAESLAAAAAANPTLAFGQGLATGMPGYQVLAPTAYYDQTGALVVGPGARTGLGAPVRLMAPTPVLISSAAAQAAAAAAAGGTASSLTGSTNGLFRPIGTQPPQQQQQQPSTNLQSNSFYGSSSLTNSSQSSSLFSHGPGQPGSTSLGFGSGNSLGAAIGSALSGFGSSVGSSASSSATRRESLSTSSDLYKRSSSSLAPIGQPFYNSLGFSSSPSPIGMPLPSQTPGHSLTPPPSLSSHGSSSSLHLGGLTNGSGRYISAAPGAEAKYRSASSTSSLFSSSSQLFPPSRLRYNRSDIMPSGRSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQVISEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKYYLKNSPDLGPIGGPPNGML", - "output": "cytoplasm ; cytoplasmic stress granule ; cytosol ; nuclear membrane ; perinuclear region of cytoplasm ; lncRNA binding ; miRNA binding ; mRNA 3'-UTR binding ; pumilio-response element binding ; RNA binding ; adipose tissue development ; chromosome organization ; hair follicle development ; miRNA processing ; mitochondrion organization ; positive regulation of miRNA-mediated gene silencing ; positive regulation of RIG-I signaling pathway ; post-transcriptional regulation of gene expression ; regulation of chromosome segregation ; regulation of miRNA-mediated gene silencing ; regulation of mRNA stability ; regulation of translation ; respiratory electron transport chain ; skeletal system development ; stress granule assembly" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MPRALWTAWVWAVISLSTEGASDQASSLSCDPTGVCDGHSRSLNSIPSGLTAGVKSLDLSNNEITHVGNRDLQSCVNLKTLRLGANEIHTVEEDSFFHLRSLEYLDLSYNRLSNLSSSWFRSLYVLKFLNLLGNLYRTLGETSLFSHLSNLRTLKVGNSNSFTEIHEKDFTGLTFLEELEISARNLQIYAPKSLKSIQNISHLILHLKQPVLLLDILVDIVSSLDYLELRDTNLHTFHFSEASISEMNTSVKKLIFRNVQFTDESFVEVVKLFNYVSGISEVEFDDCTHDGIGDFRALALERTRYLGNVETLTIRKLHIPQFFLFQDLSSIYSLTGKVKRVTIENSKVFLVPCLLSQHLKSLEYLDLSENLMSEETLKNSACEHAWPFLQTLVLRQNRLKSLEKTGELLLTLKNLTNLDISKNNFLSMPETCQWPGKMKQLNLSSTRIHSLTHCLPQTLEILDVSSNNLDSFSLILPQLKELYISRNKLKTLPDASFLPVLSVMRISRNIINTFSKEQLDSFQQLKTLEAGGNNFICSCDFLSFMQGQQALARVLADWPDDYWCDSPSHVRGQRVRDARLTLSECHRTAVVSAVCCALFLLLLLTGVLCHRLHGLWYMKMMWAWLQAKRKPRKAPRRDICYDAFVSYSERDSYWVENLMVRELEHFDPPFKLCLHKRDFIPGKWIIDNIIDSIEKSHKTIFVLSENFVKSEWCKYELDFSHFRLFDENNDAAILILLEPIDKKAIPQRFCKLRKVMNTKTYLEWPMDETQQEGFWLNLRAAVRS", - "output": "Golgi apparatus ; membrane raft ; phagocytic vesicle membrane ; NAD(P)+ nucleosidase activity ; NAD+ nucleotidase, cyclic ADP-ribose generating ; transmembrane signaling receptor activity ; cellular response to diacyl bacterial lipopeptide ; cellular response to triacyl bacterial lipopeptide ; inflammatory response ; innate immune response ; toll-like receptor signaling pathway" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MATRGANVIWFRHGLRLHDNPALLAALADKDQGIALIPVFIFDGESAGTKNVGYNRMRFLLDSLQDIDDQLQAATDGRGRLLVFEGEPAYIFRRLHEQVRLHRICIEQDCEPIWNERDESIRSLCRELNIDFVEKVSHTLWDPQLVIETNGGIPPLTYQMFLHTVQIIGLPPRPTADARLEDATFVELDPEFCRSLKLFEQLPTPEHFNVYGDNMGFLAKINWRGGETQALLLLDERLKVEQHAFERGFYLPNQALPNIHDSPKSMSAHLRFGCLSVRRFYWSVHDLFKNVQLRACVRGVQMTGGAHITGQLIWREYFYTMSVNNPNYDRMEGNDICLSIPWAKPNENLLQSWRLGQTGFPLIDGAMRQLLAEGWLHHTLRNTVATFLTRGGLWQSWEHGLQHFLKYLLDADWSVCAGNWMWVSSSAFERLLDSSLVTCPVALAKRLDPDGTYIKQYVPELMNVPKEFVHEPWRMSAEQQEQYECLIGVHYPERIIDLSMAVKRNMLAMKSLRNSLITPPPHCRPSNEEEVRQFFWLADVVV", - "output": "cytoplasm ; cytosol ; nucleoplasm ; nucleus ; perinuclear region of cytoplasm ; blue light photoreceptor activity ; DNA binding ; FAD binding ; flavin adenine dinucleotide binding ; G protein-coupled photoreceptor activity ; photoreceptor activity ; blue light signaling pathway ; cellular response to light stimulus ; circadian behavior ; circadian regulation of gene expression ; circadian rhythm ; detection of light stimulus involved in magnetoreception ; entrainment of circadian clock ; entrainment of circadian clock by photoperiod ; gravitaxis ; locomotor rhythm ; magnetoreception ; negative regulation of DNA-templated transcription ; phototransduction ; regulation of circadian rhythm ; regulation of circadian sleep/wake cycle, sleep ; response to blue light ; response to light stimulus ; response to magnetism ; UV-A, blue light phototransduction" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MDAIKKKMQMLKLDKENALDRAEQAEADKKAAEDRSKQLEDELVSLQKKLKGTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHALNDMTSI", - "output": "actin cytoskeleton ; actin filament ; bleb ; cytoplasm ; cytosol ; muscle thin filament tropomyosin ; myofibril ; protein-containing complex ; ruffle membrane ; stress fiber ; actin binding ; actin filament binding ; cytoskeletal protein binding ; disordered domain specific binding ; identical protein binding ; protein heterodimerization activity ; protein homodimerization activity ; structural constituent of cytoskeleton ; actin filament capping ; actin filament organization ; cardiac muscle contraction ; in utero embryonic development ; muscle filament sliding ; negative regulation of cell migration ; negative regulation of vascular associated smooth muscle cell migration ; negative regulation of vascular associated smooth muscle cell proliferation ; positive regulation of ATP-dependent activity ; positive regulation of cell adhesion ; positive regulation of heart rate by epinephrine ; positive regulation of stress fiber assembly ; regulation of ATP-dependent activity ; regulation of cell shape ; ruffle organization ; sarcomere organization ; ventricular cardiac muscle tissue morphogenesis ; wound healing" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MLKVGLTGGIGAGKSEVSRLLVEHGAVLIDADRIAREVVAPGTPGLAAVVEAFGTDVLAPDGSLDRPKLGSIVFADPDKLAVLNAIVHPLVGARSRELETAAAADAVVIHDVPLLAENGLAPLYDLVVVVDASPETQLDRLVRLRGMTEQDARARMAAQATREKRLAIADIVMDNDVPLEELERRVGDVWADLVHRAHQPGESQE", - "output": "cytoplasm ; ATP binding ; dephospho-CoA kinase activity ; coenzyme A biosynthetic process ; phosphorylation" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MSHPALTQLRALRYFKEIPALEPQLLDWLLLEDSMTKRFEQQGKTVSVTMIREGFVEQNEIPEELPLLPKESRYWLREILLCADGEPWLAGRTVVPVSTLSGPELALQKLGKTPLGRYLFTSSTLTRDFIEIGRDAGLWGRRSRLRLSGKPLLLTELFLPASPLY", - "output": "cytoplasm ; chorismate lyase activity ; pyruvate biosynthetic process ; ubiquinone biosynthetic process" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MANSAQARKRARQAAKANSHNSALRSKFRTAIKAVRKAIDAGDQAKAAELFKAATKTIDTIADKKIVHKNKAARHKSRLSAAVKGLQAQAAQ", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MVNKRMQTLLMQLRQQGIQDERLLQALEAVPRERFVDEALSHKAYENTALPIGSGQTISQPYMVARMTELLQLTPTSRVLEIGTGSGYQTAILAHLVEHVCSVERIKGLQWQAKRRLKQLDLHNVSTRHGDGWLGWASRGPFDAIIVTAAPPEIPNALLEQLDEGGILVLPVGEQAQTLKCVQRRNNEFKVETVEAVRFVPLVKGELA", - "output": "cytoplasm ; protein-L-isoaspartate (D-aspartate) O-methyltransferase activity ; methylation ; protein modification process ; protein repair" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MPKNKGKGGKNRRRGKNENESEKRELVFKEDGQEYAQVIKMLGNGRLEAMLFDGVKRLFHIRGKLRKKVWINTSDIILVGLREYQDNKADVILKYNADEARSLKAYGELPEHAKINETDTFGPGDDDEIQFDDIGDDDEDIDDI", - "output": "RNA binding ; translation initiation factor activity" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MSKVGTGDSKNTLYCSFCGKSQHEVRKLIAGPTVFICDECVELCMDIIREENKSSLVKSRDGIPTPKEICKVLDDYVIGQGHAKKVLSVAVHNHYKRLNHQTKHNDVELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQSADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFSGLEKIISARGRTTSIGFAAQVLAPEDRRTGEIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDEASLKKILTDPKNALVKQYQRLFEMENIELTFADEALGAVARKAIERKTGARGLRSILESILLETMFDLPGLEGVEEVVISREVVEGTARPLYIYADRADRASETSASA", - "output": "ATP binding ; ATP hydrolysis activity ; ATP-dependent protein folding chaperone ; protein dimerization activity ; unfolded protein binding ; zinc ion binding" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MSQTVHFQGNPVTVANSIPQAGSKAQTFTLVAKDLSDVTLGQFAGKRKVLNIFPSIDTGVCAASVRKFNQLATEIDNTVVLCISADLPFAQSRFCGAEGLNNVITLSTFRNAEFLQAYGVAIADGPLKGLAARAVVVIDENDNVIFSQLVDEITTEPDYEAALAVLKA", - "output": "thioredoxin peroxidase activity" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MHRKVILLLTVSLLLRIGFFSYGIFQDSHFDVKYTDIDYFVFHDAAGYVNNGQSPYLRDTYRYTPLLSFLLLPNYYLKWIHMGKVFFVLFDLITGVMIIKLLQGSCQLTKQLILASIWLLNPIVITISTRGNAESVLCFLIICALYFLKRDRLLISGLFYGLSIHFKIYPIIYALPIGIYLLLSSHNRNCIWRLFMIGISTLIGITAPTYFMYKLYGSEFIEHSYMYHLTRTDHRHNFSIWNLVLLLESAGIHLSQSIELSKLAFVPQLTLCAVLPYLLWKSQTFENLMNVLFVQTYAFVTFNKVCTSQYFIWYLVLSPFYFANTTITWRKGVVCIFLWILSQAVWLSQAYLLEFKGQNVFFPNLFFGNIVFFLINVYLLGVFITDIKSRTSFQDNQHKKNI", - "output": "endoplasmic reticulum membrane ; alpha-1,4-mannosyltransferase activity ; glycolipid mannosyltransferase activity ; cell wall organization ; GPI anchor biosynthetic process" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MKYQQLENLESGWKWAYLVKKHREGEAITRHIENSAAQDAVEQLMKLENEPVKVQEWIDAHMNVNLATRMKQTIRARRKRHFNAEHQHTRKKSIDLEFLVWQRLAVLARRRGNTLSDTVVQLIEDAERKEKYASQMSSLKQDLKDILDKEV", - "output": "cytoplasm ; sequence-specific DNA binding ; cell cycle ; cell division ; regulation of DNA-templated transcription" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MNKILLKRQILYNLPKYFKNNIPYTITINKSNQFINNNCKNNNNNFRKLNFTTTTTTTTTAPITNNKPKSNMLYSPKDRSYEEAVNALLTLQSNQTVIISWTKERRDNKEESAKFLMEEMRNYCKTLSIDLERESIIHVAGTKGKGSTCAITESIIREQGFSTGLFTSPHLISPRERIRINGEMISKEMFSQYFWNCWDLLIKDYQTQLPNFFRYLTLMALKIFQDEAIQCTILEVGIGGRMDSTNVFPKPMVTGISALGYDHQNLLGNTLAEIALEKAGIMKVGIPIFTVSSQLPEAINVLIDHSNKVKSPLSIVPSIDQYTISSGGGNNNNNKIESIGLKGTHQLENASLAIALANCWFKKQTFKDVNEIFNSENHKQYNYETNNYNVTQFTPLLKSIELGLKNCEWAGRAQHFTNPSHFPNMDFYLDGAHTVESSIVMLNWWKSIVNTTTTTTTTTTTTTTNNNDDDTIHILIFNSTGGRNPTSFLTPIIQSIDNKEIPIFNKSIIPNIIIEKPIDKKYYINEIIQSNQSSTATTTPIPDNAAVKQTTEIKESSTWEDFVVECYDKLSKKSHPCITADSIESSIEIAKELSENGTKNVKVLITGSLYLVGGVLKVLLKEKSFN", - "output": "cytoplasm ; cytosol ; mitochondrion ; ATP binding ; metal ion binding ; tetrahydrofolylpolyglutamate synthase activity ; one-carbon metabolic process ; tetrahydrofolylpolyglutamate biosynthetic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MRVVVAITGASGTIYGIKLYETLRDLGHEVILLASKTGIKVAKYETGIEVKPDFSEDELFAPIASGSYPFDAMVIAPCSMKTLSAIANGFSNNLITRAADVALKERRKLVLLIRETPLNLIHIQNMLKITQAGGIIMPASPAFYHKPGTIDDMIKFIIGKILDVLGINHNLYKRWGMDYND", - "output": "flavin prenyltransferase activity" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MSLRFVIGRAGSGKSTLCLHEVQEELKQRPRGETILYLVPEQMTFQTQQALIGSEDVRGSIRAQVFSFSRLAWKVLQEVGGASRLHIDEAGVHMLLRKIVESRKDGLSVFQKAAEQNGFFEHLGSMIAEFKRYNVTPSNVYEMWQQLDAHSSSAEQKLLANKVYDLQLLYDDFERALIGKYLDSEDYLQLLVEKLPQSEYVKGAEVYIDGFHSFSPQELEIVRQLMICGARVTITLTIDEKTLAQPVNELDLFYETTLTYEKIKQVAREEKIEIEKTIPLMEQPRFHSPALAHLEMHYEARPNEKFHGEASVTIHTAANLRAEVEGVAREIRRLVAEENYRYRDIAVLLRNGESYYDVMRTLFTDYNIPHFIDEKRPMSHHPLVECIRSALEIISGNWRYDAVFRCVKTELLYPLDVRKETMREEMDEFENYCLAYGVQGKRWTSEDPWMYRRYRSLDDTNGMITDSEREMEEKINRLRDVVRTPVIRMQKRLKRAGTVMQMCEAVYLFLEELDVPKKLEALRIRAEENGDFLFATDHEQVWEEVMSLLDTFVEMLGEEKMSLSMFTDVMSTGLEALQFANIPPSLDQVLIANIDRSRLSNVKATFVIGVNEGVIPAAPMDEGMLSDEERDVLSAAGIELAPTTRQTLLEEQFVMYQMVTRATEKLYISCPLADEEGKTLLASSFIKKIKRMFPDVKDTFITNDVNDLSRLEQISYVATPEVTLSYVMQQLQTWKRYGFEGNLDFWWDVYNFYVTSDEWKQKSSRVLSSLFYRNRAQKLSTAVSRDLYGDKIKGSVSRMELFNRCAYAHFAQHGLSLRERDIFKLDAPDIGELFHAALKRIADRLLRENRTWADLSIKECEHLSAVVIEEIAPLLQRQILLSSNRHFYLKQKLQQIIFRTSIILREHAKSSGFVPVDLEVPFGMGGTGSLPPMEFSLPNGVKMEVVGRIDRVDKAEDENGTFLRIIDYKSSSKALDLTEVYYGLALQMLTYLDVVTSNAQTWMKKGGTASPAGVLYFHIHNPIVEVKGDASEAEIEKEILKKFKMKGLVLGDADVVRLMDNKLSTGSSDIISAGLKKDGSFSARSSIASEQEFNVLQKYVHHTFENIGKDITEGVIDIAPYKKGNKAACTFCNFKSVCQFDESLEDNQFRTLKDMKDSEAMEKIREEVGGE", - "output": "4 iron, 4 sulfur cluster binding ; 5'-3' exonuclease activity ; ATP binding ; ATP hydrolysis activity ; double-stranded DNA binding ; isomerase activity ; metal ion binding ; double-strand break repair via homologous recombination" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "METRYNLKSPAVKRLMKEAAELKDPTDHYHAQPLEDNLFEWHFTVRGPPDSDFDGGVYHGRIVLPPEYPMKPPSIILLTANGRFEVGKKICLSISGHHPETWQPSWSIRTALLAIIGFMPTKGEGAIGSLDYTPEERRALAKKSQDFCCEGCGSAMKDVLLPLKSGSGSSQADQEAKELARQISFKAEVNSSGKTIAESDLNQCFSLNDSQDDLPTTFQGATASTSYGAQNPSGAPLPQPTQPAPKNTSMSPRQRRAQQQSQRRPSTSPDVLQGQPPRAHHTEHGGSAMLIIILTLALAALIFRRIYLANEYIFDFEL", - "output": "endoplasmic reticulum membrane ; nucleus ; ATP binding ; ubiquitin conjugating enzyme activity ; ubiquitin protein ligase binding ; ubiquitin-protein transferase activator activity ; negative regulation of retrograde protein transport, ER to cytosol ; protein N-linked glycosylation via asparagine ; protein polyubiquitination ; regulation of macrophage cytokine production ; regulation of tumor necrosis factor production ; spermatid development ; ubiquitin-dependent ERAD pathway" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MAIERTFSIIKPNAVAKNVIGNIFARFEAAGFKIVGTKMLHLTVEQARGFYAEHDGKPFFDGLVEFMTSGPIVVSVLEGENAVQRHRDLLGATNPANALAGTLRADYADSLTENGTHGSDSVESAAREIAYFFGEGEVCPRTR", - "output": "cytoplasm ; ATP binding ; metal ion binding ; nucleoside diphosphate kinase activity ; CTP biosynthetic process ; GTP biosynthetic process ; phosphorylation ; UTP biosynthetic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MLSPVSRDASDALQGRKCLRPRSRRLPLPAAVRAHGPMAELTDSARGCVVFEDVFVYFSREEWELLDDAQRLLYHDVMLENFALLASLGIAFSRSRAVMKLERGEEPWVYDQVDMTSATEREAQRGLRPGCWHGVEDEEVSSEQSIFVAGVSEVRTLMAELESHPCDICGPILKDTLHLAKYHGGKARQKPYLCGACGKQFWFSTDFDQHQNQPNGGKLFPRKEGRDSVKSCRVHVPEKTLTCGKGRRDFSATSGLLQHQASLSSMKPHKSTKLVSGFLMGQRYHRCGECGKAFTRKDTLARHQRIHTGERPYECNECGKFFSQSYDLFKHQTVHTGERPYECSECGKFFRQISGLIEHRRVHTGERLYQCGKCGKFFSSKSNLIRHQEVHTGARPYVCSECGKEFSRKHTLVLHQRTHTGERPYECSECGKAFSQSSHLNVHWRIHSSDYECSRCGKAFSCISKLIQHQKVHSGEKPYECSKCGKAFTQRPNLIRHWKVHTGERPYVCSECGREFIRKQTLVLHQRVHAGEKL", - "output": "nucleus ; DNA-binding transcription factor activity ; metal ion binding ; RNA polymerase II cis-regulatory region sequence-specific DNA binding ; regulation of transcription by RNA polymerase II" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MRNPNIFLALYVTGSWIWRQRMPMAQCLKSCVCSDYEPLVKDAVQLPVVDEGRVTAAVNVVKLFLPDCLSVDDVLKSRDELKKLAQARNISKILAKSATAIHIARGIKCPKGTENVLRQTLVDNCTVFKSMYSVLAYLYLSPGADTDGMIDQVVAQTADRTIMLGDMTVLSHAMRVDGVDIPHSSQDLAKMGLSAADSDTLDPIQLVGVMEPPSPPPHTADAREDAPHVSPPERRPQSSATLTSLDAKSRRGLAGQVPAS", - "output": "host cell Golgi apparatus ; viral tegument" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MKLNNLPSEFQEALPILEKIKAAGFEAYFVGGSVRDAILGRPIHDVDIATSSYPQETKQIFSRTIDVGIEHGTVLVLEGKKEYEITTFRTEEEYVDFRRPSQVSFVRSLEEDLKRRDFTVNAFALDEEAQIVDLFDGMTDLENRTLRAVGIPAERFNEDALRIMRGFRFAATLDFEIEPTTFEAMVQTAPLLEKISVERSFIEFDKLLMADFWRKGLRAMIDSKAYNFLPDLAGKSDELEAMLTSLTEEFRFSTSEQAWALLFVCLGIDNIKSFLKKWKTSNDFQRSVVKLVEIYQLRQAGPVTKQICFKYGKEFLYLVEELHQAQGFVTDFAAIDKIDQALTIHDKHEIVVNGGHLMKAFDLKPGPVLGELLKEVEFQIVEGQLENEEQAIMTFVKGILENE", - "output": "ATP binding ; CCA tRNA nucleotidyltransferase activity ; magnesium ion binding ; tRNA binding ; RNA repair ; tRNA 3'-terminal CCA addition" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MAVNQEKEKAIELAMSAVERQFGKGSIMRLGNDEPMMRDVQAIPTGSISLDIALGVGGVPKGRIIEIFGPESSGKTTLCLHIVAEAQKRGGICGYVDAEHALDVGYARKLGVRTDDLLLSQPDTGEQALEIAEMLVRSGAIDVLVVDSVAALVPKAELEGEMGDAHMGVQARLMSQALRKLTGTIAKSQTCVIFINQIRMKIGVMFGNPETTTGGNALKFYASQRLDIRRIGAIKNGDNVVGSRTRVKVVKNKVAPPFKEVEFDIMYGTGISREGDLIDLASNENIVEKSGSWFSFNGERIGQGRENVKEYLREHPEIAKDIEGRVLEKYGIGKSGAPSPRRRTSPRRPKVAARSAAV", - "output": "cytoplasm ; ATP binding ; ATP-dependent DNA damage sensor activity ; damaged DNA binding ; single-stranded DNA binding ; DNA recombination ; DNA repair ; SOS response" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MAKRLVLFAAVVIALVALTTAEGEASRQLQCERELQESSLEACRQVVDQQLAGRLPWSTGLQMRCCQQLRDVSAKCRSVAVSQVARQYEQTVVPPKGGSFYPGETTPLQQLQQGIFWGTSSQTVQGYYPSVTSPRQGSYYPGQASPQQPGQGQQPGKWQEPGQGQQWYYPTSLQQPGQGQQIGKGKQGYYPTSLQQPGQGQQIGQGQQGYYPTSPQHTGQRQQPVQGQQIGQGQQPEQGQQPGQWQQGYYPTSPQQLGQGQQPGQWQQSGQGQQGHYPTSLQQPGQGQQGHYLASQQQPAQGQQGHYPASQQQPGQGQQGHYPASQQQPGQGQQGHYPASQQEPGQGQQGQIPASQQQPGQGQQGHYPASLQQPGQQGHYPTSLQQLGQGQQIGQPGQKQQPGQGQQTGQGQQPEQEQQPGQGQQGYYPTSLQQPGQGQQQGQGQQGYYPTSLQQPGQGQQGHYPASLQQPGQGQGQPGQRQQPGQGQHPEQGQQPGQGQQGYYPTSPQQPGQGQQLGQGQQGYYPTSPQQPGQGQQPGQGQQGHCPMSPQQTGQAQQLGQGQQIGQVQQPGQGQQGYYPTSLQQPGQGQQSGQGQQSGQGHQPGQGQQSGQEKQGYDSPYHVSAEQQAASPMVAKAQQPATQLPTVCRMEGGDALSASQ", - "output": "nutrient reservoir activity" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MLSAKGVSLGLGLGLGAWGPVLLGVVGVAGALALYGYYKNRNAEPAAAEAV", - "output": "magnetosome membrane" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MSLMDPLANALNHVSNCEGVGKNVAYLKPASKLIGRVLKVMQDQGYIGNFEYIEDGKAGVYKVDLIGQINKCGAVKPRYAVKYQEFEKFEKRYLPAKGFGLLIVSTPKGLMTHDEARTAGVGGRLISYVY", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MKGLFVTIEGPEGSGKTTLIKSLLPYFEQKAQKVMATREPGGIAISEDIRTILHKQEYTMMEARTEALLYAAARRQHLVEKVMPALNEDYLVLCDRFIDSSLAYQGYARGLGMDKIFEINRFATEDCMPSLTIYLDIEPEVGLARIEKDAGREVNRLDMEDISFHKRVREGYLQVVERFSDRIVLVNADQPMEKLIEEVVQIIEDKLL", - "output": "cytoplasm ; cytosol ; ATP binding ; thymidylate kinase activity ; uridylate kinase activity ; dTDP biosynthetic process ; dTTP biosynthetic process ; dUDP biosynthetic process ; phosphorylation" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MAKRLDLNDVNIYYGDFHAVQDVNLHIPPKAVTAFIGPSGCGKSTVLRTLNRMHEVIPGAYVKGEILLDGEDIYGPKIDPVAVRNTIGMVFQKANPFPTMSIEENVVAGLKLSGEKNKKKLREVAERALRGANLWDEVKDRLDKPGGGLSGGQQQRLCIARAIAVEPEVLLMDEPCSALDPISTLAVEDLIHELKEDFTIVIVTHNMQQAARVSDQTAFYSLEATGKPGQLVEVGPTKQIFENPTKKETEDYISGRFG", - "output": "plasma membrane ; ATP binding ; ATP hydrolysis activity ; ATPase-coupled phosphate ion transmembrane transporter activity ; inorganic phosphate transmembrane transporter activity" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MKNLGNMMKQAQQMQARMQEMQSKLAEVEVNGVSAGGMVSILLNGKGELKQIKLDKSVVDPEDVEVLEDLIVAAFNDAKNKVEAHMAEETAKLMGGLKLPPGFKLPF", - "output": "bacterial nucleoid ; cytoplasm ; DNA binding" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MAAESGKVDPMKQFSIEPMLGSEGWEIAGYNIAFTNSAAWMALTTVLLAVFVWGGMKGQLVPGRWQMMVESFTSFIDDMLEVNIGKAGRKYVPYVFSLFMFILFGNLLGLLPLGVLGIHPFTFTSHFTITGVLAIISFSIVLIVGFWKHGFHFFSLFVPSGTPLPMIPIIFPIELISFLVRPFSLALRLFVAMMAGHVLLKVLSSFVIDGINAGAGFGLLVGAPSFILMIGISALEILVAGIQAYVFALLTSLYINDAENLH", - "output": "plasma membrane ; proton-transporting ATP synthase complex, coupling factor F(o) ; proton-transporting ATP synthase activity, rotational mechanism" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MFINRWLFSTNHKDIGTLYMIFGAWAGMVGTGLSILIRAELGQPGSLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAITQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTIGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFTGYTLNDTWAKIHFTIMFVGVNMTFFPQHFLGLAGMPRRYSDYPDAYTTWNTISSMGSFISLTAVILMVYMIWEALASKRLVKSVPLTTTNLEWMHGCPPPFHTFEEPVFIKSPQL", - "output": "mitochondrial inner membrane ; respiratory chain complex IV ; cytochrome-c oxidase activity ; heme binding ; metal ion binding ; oxidative phosphorylation" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MGESERSEAFGIPRDSPLSSGDAAELEQLRREAAVLREQLENAVGSHAPTRSARDIHQLEARIDSLAARNSKLMETLKEARQQLLALREEVDRLGQPPSGYGVLLATHDDDTVDVFTSGRKMRLTCSPNIDAASLKKGQTVRLNEALTVVEAGTFEAVGEISTLREILADGHRALVVGHADEERVVWLADPLIAEDLPDGLPEALNDDTRPRKLRPGDSLLVDTKAGYAFERIPKAEVEDLVLEEVPDVSYADIGGLSRQIEQIRDAVELPFLHKELYREYSLRPPKGVLLYGPPGCGKTLIAKAVANSLAKKMAEVRGDDAHEAKSYFLNIKGPELLNKFVGETERHIRLIFQRAREKASEGTPVIVFFDEMDSIFRTRGTGVSSDVETTVVPQLLSEIDGVEGLENVIVIGASNREDMIDPAILRPGRLDVKIKIERPDAEAAQDIYSKYLTEFLPVHADDLAEFDGDRSACIKAMIEKVVDRMYAEIDDNRFLEVTYANGDKEVMYFKDFNSGAMIQNVVDRAKKNAIKSVLETGQPGLRIQHLLDSIVDEFAENEDLPNTTNPDDWARISGKKGERIVYIRTLVTGKSSSASRAIDTESNLGQYL", - "output": "proteasome complex ; ATP binding ; ATP hydrolysis activity ; modification-dependent protein catabolic process ; proteasomal protein catabolic process" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MIWNNDDTEHSTGGLYRWTMDALFGRQISPSRKFKEVSQDDTNYNMKSHKDKQWDGHGFQPRTRSSSASFDRSFLQRYELLQDEEEQDIMRPVRSPARPYLSAGHAAGQDAALANDESTDTFSNKRQRFKGKFSGPKYHDESLKFRAPAKNDPFISKLFQRESPEHPSNLPGKFPSPFKQALGLPAGVQVQLDPEEQIPQKMFTDEYLQLLAELDQNGQKLKQLQQGLHQKQQDHILQETSYREKYHVMRQELITELKQSKKLYDNYYRLYEKHKKMRALDTDASRLRQRISDLEAQVVDASIEKAEEVRKLNETIFQLEFREQETQSKHERERIRYQSRIAELESIVESRLSISNGVQNPPLRERIKPVNSSARI", - "output": "cytoplasm ; spindle pole body" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MDVLINKLASCNFSRTRNQVGKPCIINCVPGAGKSTLIRELLNSDSRFRAYTFGEADPKNLSGRRILPASELQNAPQGALIIIDEYTEGSWEPGKICAAFGDPIQSRGPGIVADFVCNKTKRFGSSTCELLNGFGFEIHSEKEDICLVRDFFEVEPEGTVIAFESEVKDILARHFVEFEDICSIRGKTFEEVTFFTASNSIPEHLRADFFQCLTRHKNKLTIACPDATFAPS", - "output": "host cell cytoplasm ; ATP binding ; RNA binding ; transport of virus in host, cell to cell" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MSQVNTSQGPVAQGRQRRLSSLSEFNDPFSNAEVYYGPPTDPRKQKQAKPAKINRTRTMSVFDNVSPFKKTGFGKLQQTRRGSEDDTYSSSQGNRRFFIEDVDKTLNELLAAEDTDKNYQITIEDTGPKVLKVGTANSYGYKHINIRGTYMLSNLLQELTIAKSFGRHQIFLDEARINENPVNRLSRLINTQFWNSLTRRVDLNNVGEIAKDTKIDTPGAKNPRIYVPYDCPEQYEFYVQASQMHPSLKLEVEYLPKKITAEYVKSVNDTPGLLALAMEEHFNPSTGEKTLIGYPYAVPGGRFNELYGWDSYMMALGLLEANKTDVARGMVEHFIFEINHYGKILNANRSYYLCRSQPPFLTEMALVVFKKLGGRSNPDAVDLLKRAFQASIKEYKTVWTASPRLDPETGLSRYHPNGLGIPPETESDHFDTVLLPYASKHGVTLDEFKQLYNDGKIKEPKLDEFFLHDRGVRESGHDTTYRFEGVCAYLATIDLNSLLYKYEIDIADFIKEFCDDKYEDPLDHSITTSAMWKEMAKIRQEKITKYMWDDESGFFFDYNTKIKHRTSYESATTFWALWAGLATKEQAQKMVEKALPKLEMLGGLAACTERSRGPISISRPIRQWDYPFGWAPHQILAWEGLRSYGYLTVTNRLAYRWLFMMTKAFVDYNGIVVEKYDVTRGTDPHRVEAEYGNQGADFKGAATEGFGWVNASYILGLKYMNSHARRALGACIPPISFFSSLRPQERNLYGL", - "output": "cytoplasm ; alpha,alpha-trehalase activity ; calcium ion binding ; trehalase activity ; cellular response to desiccation ; trehalose catabolic process" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MKIRIGHGFDVHKFGEPRPLILCGVEVPYETGLVAHSDGDVVLHAISDAILGAMALGDIGKHFPDTDAAYKGADSRVLLRHCYALAKAKGFELGNLDVTIIAQAPKMAPHIEDMRQVLAADLNADVADINVKATTTEKLGFTGRKEGIAVEAVVLLSRQ", - "output": "2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity ; metal ion binding ; isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway ; terpenoid biosynthetic process" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MAEKFIKHTGLVVPLDAANVDTDAIIPKQFLQKVTRTGFGAHLFNDWRFLDEKGQQPNPDFVLNFPQYQGASILLARENFGCGSSREHAPWALTDYGFKVVIAPSFADIFYGNSFNNQLLPVKLSDAEVDELFALVKANPGIHFDVDLEAQEVKAGEKTYRFTIDAFRRHCMMNGLDSIGLTLQHDDAIASYEEKQPAFMR", - "output": "3-isopropylmalate dehydratase complex ; 3-isopropylmalate dehydratase activity ; leucine biosynthetic process" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MSQSTSVLRRNGFTFKQFFVAHDRCAMKVGTDGILLGAWAPVAGVKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAATQAQENINQSPWAERINIYPADIQQWITQQTARFDLIISNPPYYQQGVECATPQREQARYTTTLDHQSLLTCAAECITEEGFFCVVLPEQIGNGFTELALRMGWHLRLRTDVAENETRQPHRVLLAFSPQAGECYSDRLVIRGPDQSYSEAYTALTQAFYLFM", - "output": "cytoplasm ; nucleic acid binding ; tRNA (adenine-N6-)-methyltransferase activity" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MQPWYHKLGRQGRQLAEQWQTDAEPWGVATPTPLDYLFDELTAPKPSTTPDKVLSYLAYYYPKLKNENNVELLTLCFLRCPLFFNDAQLVSFSDNYRVIECFKYIMDKKFQISQPTLPFYRFYNALFGALAKVVADSACAWKVVPVAVGCLLSVDSRNDYDRYPEHFQLIATVDAKLVDMAAHTLERSMDGPLSNDLLCLNVVALSCVQDKLVDSQLLRILRVRSDILKILTELTFNSPYGLDNGRLLTKSNANTPIVVRHLNRISFLFTKLTSIHPKIVLLADDLDLILNRIQTFSESVLSIPNPSETQWSTLRVVLFAQVMMFEGIMARFFQINNHSLNSTVLPTLCRKILTTLFNFNFVVDRIGTGGFESYNFVYASCLSTLTSYDIPTAETLIKCWTSSVAFKKVDNSATERGKLLFDLQFIENVVNLVSDSLKFEFIIPIVQDLIGNAQDQAVLESAHSVMLKYFTSVDTYNEAQLVDYTNNVKHVGAQLIDYLTLSLDQFPARLSLSQVGIIVETLAKITFPDTAVHECDPELYRELLLLVYNRCLVATSEELPNVQAPPKTRHGAFTSLLIRILPLIPFDEYQSWLERTLSLAFRTVGDERTYLLDLLWDSILGTNRHYPQKGYVGIQWWYEHVNESQEKAKL", - "output": "peroxisomal matrix ; peroxisome organization" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MKQSHFFAHLSRLKLINRWPLMRNVRTENVSEHSLQVAMVAHALAAIKNRKFGGNVNAERIALLAMYHDASEVLTGDLPTPVKYFNSQIAQEYKAIEKIAQQKLVDMVPEELQDIFAPLIDEHAYSDEEKSLVKQADALCAYLKCLEELAAGNNEFLLAKTRLEATLEARRSQEMDYFMEVFVPSFHLSLDEISQDSPL", - "output": "cytoplasm ; 5'-deoxynucleotidase activity ; metal ion binding ; nucleotide binding" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MSSSPSRNPTNAEAPPPPPTSTDAVAEGSSKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKNGTLAHVPPPRPKRKAAHPYPQKASKNAQMPLQVSTSFTTTRNGDMPGYASWDDASMLLNRVISPQHELATLRGAEADIGSKGLLNVSSPSTSGMGSSSRTVSGSEIVRKAKQPPVLHGVPDFAEVYNFIGSVFDPETRGHVEKLKEMDPINFETVLLLMRNLTVNLSNPDLESTRKVLLSYDNVTTELPSVVSLVKNSTSDKSA", - "output": "nucleus ; DNA-binding transcription factor activity ; sequence-specific DNA binding ; circadian regulation of gene expression ; histone H3 acetylation ; photoperiodism, flowering ; positive regulation of circadian rhythm ; positive regulation of gene expression ; positive regulation of transcription by RNA polymerase II ; regulation of circadian rhythm ; regulation of DNA-templated transcription" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MSRRGTAEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRTVKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR", - "output": "chloroplast ; small ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MSVHSILFSSEHVTEGHPDKLCDQVSDAVLDACLAGDPFSKVACESCAKTGMVMVFGEITTKAVLDYQKIVRNTIKDIGFDSADKGLDYESCNVLVAIEQQSPDICQGLGNFDSEDLGAGDQGMMFGYATDETETLMPLTYELARGLAKKYSELRRSGSLEWARPDAKTQVTVEYDYDTREGKQVLTPKRVAVVLISAQHDEHVTNDKISVDLMEKVIKAVIPANMLDAETKYWLNPSGRFVRGGPHGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDPSKVDRSAAYAARWIAKSIVAGGLARRCLVQLAYAIGVAEPLSMHVETYGTGKYDDAKLLEIVKQNFKLRPYDIIQELNLRRPIYYDTSRFGHFGRKDELGTGGFTWEVPKKMVE", - "output": "ATP binding ; metal ion binding ; methionine adenosyltransferase activity ; one-carbon metabolic process ; S-adenosylmethionine biosynthetic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MAKAKFERTKPHVNIGTIGHVDHGKTTLTAAITKVLHDQYPDLNESRAFDQIDNAPEERQRGITINISHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMPQTREHVLLARQVGVPYILVALNKADMVDDEELIELVEMEVRELLAAQDFDEDAPVVKVSALKALEGDEKWVKSVQELMAAVDESIPDPVRETDKPFLMPVEDVFTITGRGTVVTGRVERGVINVNEEVEIVGIRPTVTKTTVTGVEMFRKLLDQGQAGDNVGLLVRGIKREDVERGQVVVKPGTTTPHTEFEGSVYILSKDEGGRHTPFFNNYRPQFYFRTTDVTGVVTLPEGTEMVMPGDNTDIAVKLIQPVAMDEGLRFAIREGGRTVGAGRVTKIIK", - "output": "cytoplasm ; GTP binding ; GTPase activity ; translation elongation factor activity" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MAELTTLARPYAKAAFEHAQAHQQLANWSAMLGLAAAVSQDDTMQRLLKAPRLTSAEKAATFIDVCGDKFNAQAQNFIHVAAENDRLLLLPEIAALFDLYKAEQEKSVDVEVTSAFALNQEQQDKLAKVLSARLGQEVRLHASEDASLIGGVVIRAGDLVIDGSVRGKIAKLAEALKS", - "output": "plasma membrane ; proton-transporting ATP synthase complex, catalytic core F(1) ; proton-transporting ATP synthase activity, rotational mechanism" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MSPIAVTSQTPATEVPSVKEIPQVITKSSPVENLILTTYPEDSSPIPLQWGAPSTDSRGPIIATRYKEGLAKHNAIGAHSGSYCVYHALAVGTKQLDPEHVADYTNSQPAFAVPEQKTWYNDEDIVAMDPFGHLTPYLFDEVSTKENVEIRPTIAVTKATMQLFEMKDAVEKGRLEVDGEVVINKNGDLNVSKVAVEPVWYLPGVAKRFGVTEEELRKALFEDTNGMYPELVTRPDIKVFLPPIGGLTVYIFGNPDFVSDPSKKLALRVHDECNGSDVFGSDICTCRPYLMFGIEEAVKEAQNGGSGVVVYFRKEGRALGEVTKYLVYNARKRGGDTADEYFHRTECIAGVRDMRFQQLMPDVLKWLGISKIDRMLSMSNMKHDAIVDQGIPIIERIPIPDELVPPDSRVEIDAKINSGYFTNGKVMDKNELKSVQGRTWNDVK", - "output": "cytoplasm ; nucleus ; GTP binding ; GTP cyclohydrolase II activity ; metal ion binding ; riboflavin biosynthetic process" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MNKGRVTQIMGPVVDVKFDGGKLPEIYNALTVKQSNENGTSINLTFEVALHLGDDTVRTVAMSSTDGLVRGTEVEDTGKAISVPVGDATLGRVFNVLGDAIDLDGEVPADVRRDPIHRQAPAFEELSTKVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHEMSDSGVIKKTAMVFGQMNEPPGARQRVALTGLTMAEHFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERITSTNKGSITSIQAVYVPADDYTDPAPATTFAHLDATTNLERRLTQMGIYPAVDPLASTSRALSPEIVGEEHYEVARQVQQTLQRYKELQDIIAILGMDELSEEDKLVVHRARRIQFFLSQNFHVAEQFTGQKGSYVPVKETVRGFKEILEGKYDDLPEDAFRLVGGIEEVIENAKKMMA", - "output": "plasma membrane ; proton-transporting ATP synthase complex, catalytic core F(1) ; ATP binding ; proton-transporting ATP synthase activity, rotational mechanism ; proton-transporting ATPase activity, rotational mechanism" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MERSLALANMTRVQQFILLGLSTRLDIRDALFAVFLTLYLLTLLENTLIIYLICSHKELHKPMYFFLGNLSCLEMCYVSVTMPTLLMGLWNGLYHIPFIACMTQLFFFIVLVGTECILLASMAYDRYVAICRPLHYPVLMRPQVCLGLAMISWLGGLLVSMIKTTCIATLSYCGPNVLNHFFCDVSPLLNLSCTHVALTELVDFISAIVILWGCFLTTMASYVAIGRAVLRMPSTTARYKAFSTCASHLVVVGIFYSVTIFIYARPKRIEAMDLNKVLSVIYTVVTPMCNPVIYCLRNKEVQVALHRTMHWS", - "output": "membrane ; plasma membrane ; G protein-coupled receptor activity ; olfactory receptor activity ; G protein-coupled receptor signaling pathway ; sensory perception of smell" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MSYQEQQCKQVCQPPLVCPPRSAQSPVLCQSAPSLVLLQSAQSPIHCQSALSHAHLSHASRNALLCNLLHHASKSAHPRANKGFSSLQNQKKRTESILHKSIATPPSSI", - "output": "cytoplasm ; keratinization" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MGVSLRHLSPSSFWVSRRPRVSSSILSFLVPRRRILCTRKVAIIKGNAGYSTATDCGGSHGFHHSGHQRSSSVEFSGEWKLNLGSKTARMVPPTVKQAGAVSAWREEVNNKLRGRNREYANNQDDAFGNGSYILKGFVPKIDDVHSYGNGQNFDYNLKPGTDITTLGRELNGFMQTNSIRGSVVALPSKDIEVGETTDVTLKPLNSDTTLDNASYKKTATISKVEKCTNLSQVRANLKKIYNRVRVVDNVSSAKETVALLMNQYRNLVHACDTEVSRIDVKTETPVDHGEMICFSIYCGSEADFGDGKSCIWVDVLGENGRDILAEFKPFFEDSSIKKVWHNYSFDNHIIRNYGIKLSGFHGDTMHMARLWDSSRRISGGYSLEALTSDPKVLGGTETKEEAELFGKISMKKIFGKGKLKKDGSEGKLVIIPPVKELQMEDREAWISYSALDSISTLKLYESMKKQLQAKKWFLDGKLISKKNMFDFYQEYWQPFGELLAKMESEGMLVDRDYLAQIEIVAKAEQEIAVSRFRNWASKHCPDAKHMNVGSDTQLRQLFFGGISNSCNDEDLPYEKLFKVPNVDKVIEEGKKRATKFRNIKLHRISDRPLPTEKFTASGWPSVSGDTLKALAGKVSAEYDYMEGVLDTCLEENIGDDDCISLPDEVVETQHVNTSVESDTSAYGTAFDAFGGGESGKEACHAIAALCEVCSIDSLISNFILPLQGSNVSGKDGRVHCSLNINTETGRLSARRPNLQNQPALEKDRYKIRQAFIASPGNSLIVADYGQLELRILAHLASCESMKEAFIAGGDFHSRTAMNMYPHIREAVENGEVLLEWHPQPGQEKPPVPLLKDAFASERRKAKMLNFSIAYGKTAIGLSRDWKVSREEAQDTVNLWYNDRQEVRKWQELRKKEAIQKGYVLTLLGRARKFPEYRSRAQKNHIERAAINTPVQGSAADVAMCAMLEISNNQRLKELGWKLLLQVHDEVILEGPSESAENAKDIVVNCMSEPFNGKNILSVDLSVDAKCAQNWYAGK", - "output": "chloroplast ; mitochondrion ; 3'-5' exonuclease activity ; DNA binding ; DNA-directed DNA polymerase activity ; double-strand break repair ; mitochondrial DNA replication ; plastid DNA replication" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MTYALLKKIDAPADLRKLDRRELRTLADELRAYVLESVSQTGGHLSSNLGTVELTIALHYVFHTPDDRVVWDVGHQSYPHKILTGRRERMNTLRQFGGISGFPRRSESQYDTFGTAHSSTSISAALGMALGARTLGEQRVSIAVIGDGAMTAGMAFEALNNAGVYKDLPLVVVLNDNDMSISPPVGALNKHLARLLSGQFYAATKKGIEKVLSVAPPVLEFAKRFEEHAKGMMVPATLFEEFGFNYIGPIDGHDLDSLVPTLQNIRKRALEGAGPQFLHVVTKKGQGYKLAEADPILYHGPGKFNPAEGIRPAAKPARKTYTQVFGEWLCDMAAADKRLIGITPAMREGSGMVEFEKRFPERYYDVGIAEQHAVTFAGGMACEGLKPIVAIYSTFLQRGYDQLIHDVALQNLPVVFALDRAGLVGADGATHAGAYDIAYLRCIPNMMVMTPSDENECRQLLTTAFHQNCPTAVRYPRGAGQGVATEAVLKDVPVGKGVMRRTGGARSGQRVAFLGFGSMVHPALGAAQALDASVADMRFVKPLDVELVKRLAEEHNYLVTVEEGSVMGGAGSAVLEALAEAGIDIPVLVLGLPDRFIDHGDPALLLSQCGLDAAGIERSVRERFGIGQAPVAVASRVA", - "output": "1-deoxy-D-xylulose-5-phosphate synthase activity ; magnesium ion binding ; thiamine pyrophosphate binding ; 1-deoxy-D-xylulose 5-phosphate biosynthetic process ; terpenoid biosynthetic process ; thiamine biosynthetic process" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MPVPGDDMGETPLTRTPIPMPAYFSQAEQSFSLKKRGRSLCYTLPPRPPVKSALPVSRIFPNKQRSWSQPRPQSVSFRSPQNKTPASKLYDQSKGDTFFKQCFKSICKLGRGSFGEVYKVQSLEDGCFYAVKRSVSPFRGESDRQRKLQEVRKHERVGEHPNCLRFVRAWEEKRMLYLQTELCAGSLQQHSEEFAGSLPPRRVWNITCDLLHGLKHLHDRNLLHLDIKPANVFISFSGVCKLGDFGLMVELDGTEGSGEAQEGDPRYMAPELLDGIFSKAADVFSLGMSLLEVACNMELPKGGDGWQQLRQGHLPTEFTSDLPPDFLKVLSAMLEPDYRRRATVDWLLSLPAIRNAERWRMVTLAQERTLGKIIAVYQFIVWLLSFVFQWLNRPVIGFLHYCGLRALPRSPPCSPFPNHLGESSFSSDWDDESLGDDVFEVPPSPLATHRNLTYHGQELIGRHSPDLLSRPSLGSTSTPRNLSPEFSMRKRSALPLTPNVSRISQDSTGKSRSPSTSHSSSGFVDAEVQRTLFLPRNLLGMFDDATEQ", - "output": "endoplasmic reticulum membrane ; Golgi membrane ; ATP binding ; metal ion binding ; protein serine kinase activity ; protein serine/threonine kinase activity ; cell cycle ; protein phosphorylation" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MTAIVDVHARQIIDSRGNPTVEVDITLEDGSFGRAAVPSGASTGAYEAVEKRDGDKSRWLGKGVQDAVDAVNDEIADAIIGMEAEDQSEIDARLIELDGTPNKGRLGANAILGASLSVARAAAEARALPLYRYVGGVSAQVLPVPMMNIINGGAHADNPIDFQEFMIMPVGAPTLFDAVRAGSEIFHTLKKALHDKGLATAVGDEGGFAPNLASAPDALDFIMQSIEKAGYKPGDDVVLALDCAATEFFKDGVYDFHGEGVKRSPAEMADYLADLCARYPIVSVEDGMGEDDFEGWKILTDKIGHKVQLVGDDLFVTNPKRLAQGIKDGLANSLLVKVNQIGTLSETLEAVNMAQRAGYTAVMSHRSGETEDSTIADLAVATNCGQIKTGSLARSDRLAKYNQLIRIEEELGPVAVYAGRSAIKALG", - "output": "cell surface ; extracellular region ; phosphopyruvate hydratase complex ; magnesium ion binding ; phosphopyruvate hydratase activity ; glycolytic process" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MEKQVEIPEVELNSGHKMPIVGYGTCVPEPMPPLEELTAIFLDAIKVGYRHFDTASSYGTEEALGKAIAEAINSGLVKSREEFFISCKLWIEDADHDLILPALNQSLQILGVDYLDLYMIHMPVRVRKGAPMFNYSKEDFLPFDIQGTWKAMEECSKQGLAKSIGVSNYSVEKLTKLLETSTIPPAVNQVEMNVAWQQRKLLPFCKEKNIHITSWSPLLSYGVAWGSNAVMENPVLQQIAASKGKTVAQVALRWIYEQGASLITRTSNKDRMFENVQIFDWELSKEELDQIHEIPQRRGTLGEEFMHPEGPIKSPEELWDGDL", - "output": "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor ; alkaloid metabolic process" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MMETQLYIGIMSGTSMDGADAVLIRMDGGKWLGAEGHAFTPYPGRLRRQLLDLQDTGADELHRSRILSQELSRLYAQTAAELLCSQNLAPSDITALGCHGQTVRHAPEHGYSIQLADLPLLAERTRIFTVGDFRSRDLAAGGQGAPLVPAFHEALFRDNRETRAVLNIGGIANISVLPPDAPAFGFDTGPGNMLMDAWTQAHWQLPYDKNGAKAAQGNILPQLLDRLLAHPYFAQPHPKSTGRELFALNWLETYLDGGENRYDVLRTLSRFTAQTVCDAVSHAAADARQMYICGGGIRNPVLMADLAECFGTRVSLHSTADLNLDPQWVEAAAFAWLAACWINRIPGSPHKATGASKPCILGAGYYY", - "output": "ATP binding ; kinase activity ; phosphotransferase activity, alcohol group as acceptor ; 1,6-anhydro-N-acetyl-beta-muramic acid catabolic process ; amino sugar metabolic process ; carbohydrate metabolic process ; peptidoglycan turnover ; phosphorylation" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MAPTTPATHDPALSHGAPPTQGSQAPANAAPNLTPADISGMQLNGLDQSQIMNLLRSLPGMFTGAKIPDQGQGNPKEDAAQTLSNLAQASSPFGGQHLPIHYQTGAAGGLPGINDPGPSTHPRGPPNLGQLSAVAMQAAPATIQHQDQQQSGRQEDGEQAGNTSIDSPSAKDGENGTGEFNQTSTSTPSGGRRGGRSATMGSDEWSRQRKDNHKEVERRRRGNINEGINELGRIVPSGSGEKAKGAILSRAVQYIHHLKENEARNIEKWTLEKLLMDQAMGDLQAQLEEIKRLWEEERMARTRLEAELEVLRNMNGVSTAGAGSGAAKDESAAGTKRRSTDGADAAGTNVEGGNNDNAEGERDGKRQRTE", - "output": "nucleus ; DNA binding ; DNA-binding transcription factor activity ; protein dimerization activity" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MSQSYINVIGAGLAGSEAAYQIAERGIPVKLYEMRGVKSTPQHKTDNFAELVCSNSLRGDALTNAVGLLKEEMRRLGSVILESAEATRVPAGGALAVDRDGFSQMVTEKVANHPLIEVVRDEITELPTDVITVIATGPLTSDALAEKIHALNDGAGFYFYDAAAPIIDVNTIDMSKVYLKSRYDKGEAAYLNAPMTKQEFMDFHEALVNAEEAPLSSFEKEKYFEGCMPIEVMAKRGIKTMLYGPMKPVGLEYPDDYTGPRDGEFKTPYAVVQLRQDNAAGSLYNIVGFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLEQTYRSKKQPNLFFAGQMTGVEGYVESAASGLVAGINAARLFKEESEAIFPETTAIGSLAHYITHADSKHFQPMNVNFGIIKELEGERIRDKKARYEKIAERALADLEEFLTV", - "output": "cytoplasm ; 5,10-methylenetetrahydrofolate-dependent tRNA (m5U54) methyltransferase activity ; flavin adenine dinucleotide binding ; methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase (FADH2-oxidizing) activity" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MPINLYSKAVFLKSAARVNQLPEDSGYEVAFAGRSNAGKSSALNCLTNNKNLARTSKTPGRTQLINLFSLDEQRRLVDLPGYGYAKVAMEVKLEWQKNLAHYLEARQCLRGLILLMDVRHPLKDLDQILVNWALHRELPVHILLTKADKLSRSEVKNAVLKVRQYYELAEHLVSVQAFSSVKKDGVEELISVLDRWYEWN", - "output": "GTP binding ; metal ion binding ; division septum assembly" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MNEQSPALRNFTINFGPQHPAAHGVLRLVLELDGEVVERVDPHIGLLHRGTEKLIETKTYLQAMPYFDRLDYVAPMNQEHAFCLAAERLLGIEVPRRGQLIRVLYSEIGRLLSHLLNVTTQAMDVGALTPPLWGFEEREKLMVFYERASGSRMHANYFRIGGVHQDLPPKLVDDIDAFCDPFLKVVDDLDQLLTGNRIFKQRNVDIGVVTLKQAWEWGFSGVMVRGSGAAWDLRKSQPYDVYAEMEFDIPIGKNGDCYDRYLIRMEEMRQSVRIMKQCIAKLRAPDGQGPVLITDNKIAPPRRGEMKRSMEALIHHFKLYTEGVHVPAGEIYAAVEAPKGEFGVYLVADGTNKPYKCKIRAPGFAHLQAMDFLCRGHLLADVSAILGSLDIVFGEVDR", - "output": "plasma membrane ; NAD binding ; NADH dehydrogenase (quinone) activity ; quinone binding" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MKDIATPNRTKDIVEKYGFSFKKSLGQNFLIDTNVLNRIVDYAEIGPKGGAIEIGPGIGALTEQLAKRAKKVVAFEIDQRLLPILDETLAPYDNVTIINKDVLKANVHEVFQEQFEEGQDVMVVANLPYYVTTPILFKLLEEKLPVRGFVVMMQKEVGDRLAAKPGTKDYGSLSIAIQYYTEVETVMTVPRTVFVPQPNVDSSVIRLLKRPKPIVEVIDEKFFFEVVRASFAQRRKTLMNNLSNNLNDFPKDKELLERILTEIGIDPKRRGETLSIEEFAMLSNALVPHKMK", - "output": "cytoplasm ; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity ; RNA binding" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MIWLTLVFASLLSVAGQLCQKQATCFAAVNKRRKHIVLWLGLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSLRHWCGLAFIIGGIVILGSTV", - "output": "plasma membrane ; carbohydrate derivative transmembrane transporter activity ; lipid A biosynthetic process ; lipopolysaccharide biosynthetic process ; response to chemical" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MKTYTAKPETVQRDWFVVDAAGQTLGRLATEIARRLRGKHKPEYTPHVDTGDYIVVINAEQVRVTGAKTTDKMYYHHSGFPGGIKSINFEKLIAKAPERVIETAVKGMLPKNPLGRDMYRKLKVYKGASHPHTAQQPQELKI", - "output": "cytosolic large ribosomal subunit ; ribosome ; mRNA binding ; structural constituent of ribosome ; negative regulation of translation ; translation" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MKDILILGIETSCDETSASVVKNGRQVLSNVISSQVALHQKYGGVVPEIASRKHVELIMPVIHQSLEEAGIKIEQVDAIGVTYGPGLVGALLVGLSAAKALAFALDKPLIGVHHIEGHIAANYIEHSLLEPPFVCLVASGGHSHIVYVQDYDKFEIMGKTRDDAAGEAFDKVARAVGLGYPGGPIIDKTAKLGNSKAIDFPRVHFGDQSLDFSFSGLKTAVLNYINSMEQKGEKYSVEDVCASFQAAVVDVLTDNLISAARIKGVKKVALAGGVAANSLLRSELVEKAKGLGLEVFYPKPVLCTDNAAMIACAAYYEFLRGHTSDVYLNAIPGLKLGER", - "output": "cytoplasm ; iron ion binding ; N(6)-L-threonylcarbamoyladenine synthase activity ; tRNA threonylcarbamoyladenosine modification" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MLARRIIAALDIKDGRVVKGIKFKNIRDAGDPIELAKRYESEGIDEIVFLDITASYEKRKILLDLVERVAEEIYVPFTVGGGIRTVEEAREIIRRGADKIFINTAAVENPSLIKEIADLIGSANLVVAIDAKWNGKFWEVYTHGGRKPRGMDAVEWAKRVEELGAGEILLTSMDTDGTKQGFDIPLTKAVVDAVNIPVIASGGAGKPEHFLEVFRIGSDAALAASIFHYGEYTVRELKMFLAKNGIPVRLD", - "output": "cytoplasm ; imidazoleglycerol-phosphate synthase activity ; lyase activity ; histidine biosynthetic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MASANPETAKPTPATVDMANPEELKKVFDQFDSNGDGKISVLELGGVFKAMGTSYTETELNRVLEEVDTDRDGYINLDEFSTLCRSSSSAAEIRDAFDLYDQDKNGLISASELHQVLNRLGMSCSVEDCTRMIGPVDADGDGNVNFEEFQKMMTSSSLLNSNGSAAPPST", - "output": "cytosol ; nucleus ; plant-type vacuole ; calcium ion binding" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MWIALLGIPILLAVLTLLLKHINKTYFILSLTKRVRTEDGSPLESKVAIMPGKTRFGNNLDILNFTPASVFNFVRESTAKAKGQNYLWYFLYAPMYNVVRPEEAEEVFQSTKLITKNVVYELIRPFLGDGLLISTDHKWHSRRKALTPAFHFNVLQSFLGIFKEECKKFLNVLEKNLDAELELNQVIPPFTLNNICETALGVKLDDMSEGNEYRKAIHAIEEVLIQRVCNPLMYYNWYFFVYGDYRKHLQNLRIVHDFSSRIIERKRQQFQQKQLGEVDEFGRKQRYAMLDTLLAAEADGQIDHQGICDEVNTFMFEGYDTTSTCLIFTLLMLALHEDVQKKCYEEVENLPEDSDDISMFQFNKLVYLECVIKESLRMFPSVPFIGRQCVEETVVNGMVMPKDTQISIHIYDIMRDPRHFPKPDLFQPDRFLPENTVNRHPFAYVPFSAGQRNCIGQKFAILEMKVLLAAVIRNFKLLPATQLEDLTFENGIVLRTQENIKVKLSKRVK", - "output": "endoplasmic reticulum membrane ; heme binding ; iron ion binding ; monooxygenase activity ; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MAIVSSTTSIIPMSNQVNNNEKGIEDNDHRGGQESHVQNEDEADDHDHDMVMPGFRFHPTEEELIEFYLRRKVEGKRFNVELITFLDLYRYDPWELPAMAAIGEKEWYFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRSETSRPIGLKKTLVFYSGKAPKGTRTSWIMNEYRLPHHETEKYQKAEISLCRVYKRPGVEDHPSVPRSLSTRHHNHNSSTSSRLALRQQQHHSSSSNHSDNNLNNNNNINNLEKLSTEYSGDGSTTTTTTNSNSDVTIALANQNIYRPMPYDTSNNTLIVSTRNHQDDDETAIVDDLQRLVNYQISDGGNINHQYFQIAQQFHHTQQQNANANALQLVAAATTATTLMPQTQAALAMNMIPAGTIPNNALWDMWNPIVPDGNRDHYTNIPFK", - "output": "nucleus ; DNA binding ; DNA-binding transcription factor activity ; flower development" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MANQKIRIRLKAYDYALIDRSAQEIVETAKRTGAVVKGPIPLPTKIERFNILRSPHVNKTSREQLEIRTHLRLMDIVDWTDKTTDALMKLDLPAGVDVEIKVQ", - "output": "small ribosomal subunit ; structural constituent of ribosome ; tRNA binding ; translation" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MTSVVVVGTQWGDEGKGKITDFLSADAEVIARYQGGDNAGHTIVIDGKKFKLHLIPSGIFFPQKISVIGNGVVVNPKSLVKELAYLHDEGVTTDNLRISDRAHVILPYHIQLDQLQEDAKGDNKIGTTIKGIGPAYMDKAARVGIRIADLLDKDIFAERLRINLAEKNRLFEKMYDSTPLDFDAIFEEYYAYGQEIKQYVTDTSVILNDALDAGKRVLFEGAQGVMLDIDQGTYPFVTSSNPVAGGVTIGSGVGPSKINKVVGVCKAYTSRVGDGPFPTELFDEVGERIREVGHEYGTTTGRPRRVGWFDSVVMRHSRRVSGITNLSLNSIDVLSGLDTVKICVAYDLDGKRIDYYPASLEQLKRCKPIYEELPGWQEDITGVRSLDELPENARNYVRRVGELVGVRISTFSVGPGREQTNILESVWASI", - "output": "cytoplasm ; adenylosuccinate synthase activity ; GTP binding ; magnesium ion binding ; 'de novo' AMP biosynthetic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MRIAMISMHTSPLEQPGSGDAGGMNVYVLNTARQLARLGVEVDIFTRATRPSQGEVVDVEERLRVINIVAGPYEGLSKEELPTQLAAFTGGIFNFARCFEVDYDVIHSHYWLSGQVGWLLRDLWDIPLVHTAHTLAAVKNVHRTLDDTPETEARRICEQQLVDNADILVVNTAQETRDLIEHYDASPDNIVVVSPGADTDLYTPGTDRMTERARRQLGIPLHTKVVAFVGRLQKFKGPDVLIRATAELMERDPDRRLRVVICGGASGANSSPDTYHNLARELGVERVVRFLSPRPPQELVAIYQAADIVAVPSYNESFGLVAMEAQASGTPVVAAAVGGLPIAVADGDTGLLVHSHSAQDWADALEQLLDDDPRRISMGEAAVDHAQQFSWAAAATQLENIYADAMSIEIPDCHARRAIGY", - "output": "acetylglucosaminyltransferase activity ; D-inositol-3-phosphate glycosyltransferase activity ; magnesium ion binding ; mycothiol biosynthetic process" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MNPLIFTTIVLTIIMGTMIVMTSSHWLTVWIGFEMNMLAVIPILMKNYNPRSMEASTKYFLTQATASMLLMLAIIINLLYSGQWSITKPLNQTASIIMTLAMAMKLGLSPFHFWVPEVTQGIQLSSGLILLTWQKLAPMSILYQIFPTINLNLMLLMSVLSVAIGGWGGLNQTQLRKIMAYSSIAHMGWMTAIMAYNPTMTLLNLVIYILLTTTTFMMFMLNSSTTTLSLSHTWNKAPLLTMTILTIMLSMGGLPPLSGFLPKWMIIQEMVKNDNIITPTIMAVTALLNLYFYMRLTYSTSLTMFPSTNNMKMKWQLNNTKSTAHVSPLIILSTLALPLSPILMLLE", - "output": "mitochondrial inner membrane ; respirasome ; NADH dehydrogenase (ubiquinone) activity ; mitochondrial electron transport, NADH to ubiquinone ; mitochondrial respiratory chain complex I assembly" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MEVRVQNIRKEFGRFPALEDVSLDIRSGELIALLGPSGSGKTTLLRLVAGLESPTEGTIFFGDEDASKKTVQQRNIGFVFQHYALFRHMTVLDNVAFGLKVRPAKRRPSAADIRRRAVDLLELVQLSGLERRYPAQLSGGQRQRVALARAMAVEPNVLLLDEPFGALDAQVRKELRRWLREIHDRTGHTTIFVTHDQEEALELADRVVVMSKGAIEQVGTPDEIYDHPVSPFVYGFIGQSNCLDVTLANGEIWHEDRPIGLRAGNEPDGAATLYFRPHDVELIDGCGGCLAGLVTASRRVAGTRHLELDLGRKHPPVEIELPPERAASTDHTRIAFRPTRWKLFRKGGQKEAPLIEAEAPVLAATGT", - "output": "ATP-binding cassette (ABC) transporter complex ; ABC-type sulfate transporter activity ; ABC-type thiosulfate transporter activity ; ATP binding ; ATP hydrolysis activity" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MYLLIDVGNSRIKWLYGNKVPSTIEAVSYKQDWQMKLIRAWHLLPEPEAIALSSVNKAEITTTIEEIVRQLWHKTVKIFVSQKQTNHTLTVVYQKPEKLGSDRYLAMLGARSLCHDPLCVVGCGTAITLDAVDGDGRHLGGFILPGMRLAENALLQNTQKLVPMRWTPHLLGNDTASCISAGIHHALPAGVDHIIDELEGQCGYYFKRFAFGGDAQILFGNRPTYRIEPDLIFGGMFAHLSPPKQV", - "output": "cytoplasm ; ATP binding ; pantothenate kinase activity ; coenzyme A biosynthetic process ; phosphorylation" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "METATIIVIFVSSLLLGITTYSVYTAFGPASKNLRDPFEEHED", - "output": "chloroplast thylakoid membrane ; photosynthesis" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MAKPTRKRRVKKNIESGVAHIHATFNNTIVMITDVHGNALAWSSAGALGFKGSRKSTPFAAQMAAEAAAKSAQEHGLKTVEVTVKGPGSGRESAIRALAAAGLEVTAIRDVTPVPHNGARPPKRRRV", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MEEVPRRQPGGLVEVEGVFQFYEDWECWDYVSQRVPGERLQRWLAMLTNNQLRRQVIREAQIWMWKHKGAAVRRNCGCRLCNPGWGSQVRNVEL", - "output": "host cell nucleus ; virion component ; cell cycle" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MKPLIIIVGPTAVGKTALGVALAQALQGEIISGDSVQVYRKLDIGSAKPTLAEQGNVPHYLLDALDPAEPFTVAQFQTLANQSIQNIQSRGKVPIVVGGTGLYIRSLIDPFQFAEHGSESIRSFWTAFLSEQGKEALHRELAKRDPLSAQRLHPNDTVRIIRALEMCQLTGKPFSEIRGNQDMNYPPLPPSLLYVGLTAPREIIYERINRRCEQMVAAGLIEETHNLIKEGYSPKLKPLQSIGYRHALLYLYGKVTLPEMMRIFQRDTRHFAKRQLTWFRRDPRVVWYDTYSGNLTNILESLIGTCSGMESRVE", - "output": "ATP binding ; tRNA dimethylallyltransferase activity ; tRNA processing" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MEARRSGNFKASIWDDDFLQSLTSPYTAKEYLKQADKLKWQVKVIIKETKQRLDQLDLIDNIQRLGISHHFRDEIQRVLQNIYEKMRVECPDRMLMEKDLYSTSLQFRLLRQHGYHVSQDVFCSFMDGAGNFQAVDDLKGILALYEASFLSREGENILGSARDFSTRHLKQKLEEITDPILAEKIRRALELPLHWRLQKLEAIWFINIYESRFDANLILLQLAKLEFNMVQAQYQEDLKWLSRWYKETGLPEKMNFARDRLAECFLWALGFIPEAHLGQARKILTKIAVLIVIMDDFYDIYGTLDEIKVFTEELQRWDINALDNLPEYMRICFLAIFNTANEIAYDILRDQGINIISNLRRLWAELGRVYYTEAKWYHSGYFPSTEEYLNVAWISITGPVLLFHAYFSIMNPIDMKELQYLEQYPGIIRWPSTVLRLADDLGTASDEIKRGDVPKSIQCYMHETGCSEEEAREYVKQLIDTTLKKMNKEILMEKPTNDFGATAMNLARISLFFYQYGDGFGVPHNQTKENLVSLIVKPICLT", - "output": "magnesium ion binding ; sesquiterpene synthase activity ; (-)-exo-alpha-bergamotene biosynthetic process ; diterpenoid biosynthetic process ; farnesyl diphosphate catabolic process" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MSTLRLLISDSYDPWFNLAVEECIFRQMPATQRVLFLWRNADTVVIGRAQNPWKECNTRRMEEDNVRLARRSSGGGAVFHDLGNTCFTFMAGKPEYDKTISTSIVLNALNALGVSAEASGRNDLVVKTAEGDRKVSGSAYRETKDRGFHHGTLLLNADLSRLANYLNPDKKKLAAKGITSVRSRVTNLTELLPGITHEQVCEAITKAFFAHYGERVEAEIISPDKTPDLPNFAEIFARQSSWEWNFGQAPAFSHLLDERFSWGGVELHFDVEKGHITRAQVFTDSLNPAPLEALAGRLQGGLYRADMLQQECEALLVDFPDQEKELRELSTWIAGAVR", - "output": "cytoplasm ; ATP binding ; lipoate-protein ligase activity ; protein lipoylation" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MHLPRRRRLQRNRIFFFLAVVSLLSVYQLQFSPSAIPALLTAHQHEDPVKVTSREPFRNKTSKTGNVTAAPKIRHCVYIDPEPTVPITASEDTTQRENVNESYPDEKPVYESKGEYPQDLFSVEERRQGWVVLHIFGMMYVFVALAIVCDEYFVPALGVITEKLQISEDVAGATFMAAGGSAPELFTSLIGVFISHSNVGIGTIVGSAVFNILFVIGTCALFSREILHLTWWPLFRDISFYIVDLLMLILFFLDSVIDWWESLLLLTAYATYVFTMKHNVSLEQWVKEELSKKLNAVQAASAEHMRKKSSVAVAEDGTKPADGKKLQPTTALQRGTSSASLHNSQMRSTIFQLMIHTLDPLAGAKFKDRVDILSNIAKVKADSLTGQGTKPEAEEEKQASQNTVQVTPASDSEPSKDKQKEDTPQDGQPPSDSDNSEDSSSDSEDDSDDDSTDDEENDEPLSLEWPETRKKQAIYLFLFPIVFPLWSTIPDVRNPDSKKFFVITFFGSIIWIAAFSYLMVWWAHQVGETIGISEEIMGLTILAAGTSIPDLITSVIVARKGLGDMAVSSSVGSNIFDITVGLPVPWFLYSVFNGFSPVAVSSNGLFCAIVLLFLMLLFVIISIALCKWKMNKILGVTMFALYFVFLIISVMLEDRIISCPVSV", - "output": "neuronal cell body ; plasma membrane ; calcium channel activity ; calcium, potassium:sodium antiporter activity ; symporter activity ; calcium ion import across plasma membrane ; calcium ion transmembrane transport ; intracellular calcium ion homeostasis ; long-term synaptic depression ; long-term synaptic potentiation ; response to stimulus ; visual perception" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MFKVLIITLLVNKIHLEKIYNVPVNCGELHPVKAHEIKCPQRLNELSLQAHHNLAKDEHYNKICRPQLKDDAHLEGFICRKQRWITKCSETWYFSTSIEYQILEVIPEYSGCTDAVKKLDQGALIPPYYPPAGCFWNTEMNQEIEFYVLIQHKPFLNPYDNLIYDSRFLTPCTINDSKTKGCPLKDITGTWIPDVRVEEISEHCNNKHWECITVKSFRSELNDKERLWEAPDIGLVHVNKGCLSTFCGKNGIIFEDGEWWSIENQTESDFQNFKIEKCKGKKPGFRMHTDRTEFEELDIKAELEHERCLNTISKILNKENINTLDMSYLAPTRPGRDYAYLFEQTSWQEKLCLSLPDSGRVSKDCNIDWRTSTRGGMVKKNHYGIGSYKRAWCEYRPFVDKNEDGYIDIQELNGHNMSGNHAILETAPAGGSSGNRLNVTLNGMIFVEPTKLYLHTKSLYEGIEDYQKLIKFEVMEYDNVEENLIRYEEDEKFKPVNLNPHEKSQINRTDIVREIQKGGKKVLSAVVGWFTSTAKAVRWTIWAVGAIVTTYAIYKLYKMVKSNSSHSKHREADLEGLQSTTKENMRVEKNDKNYQDLELGLYEEIRSIKGGSKQTGDDRFFDH", - "output": "membrane ; viral envelope ; virion membrane ; viral entry into host cell ; virion attachment to host cell" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MKVRILTVGNKMPKWVQTGFDEYHKRIQPMLTTEVVEIAAAKRAKNPSDANLAQYREQEGQAILAAHAVAGREQLWVLDVKGKMLSTENLADKLSDGMQQGDDIALVIGGADGVSPEVLAKADVKWSLSALTLPHPLVRVVLMEQLYRAMSINHNHPYHRGN", - "output": "cytoplasm ; rRNA (pseudouridine-N3-)-methyltransferase activity" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MKGQQKTAETEEGTVQIQEGAVATGEDPTSVAIASIQSAATFPDPNVKYVFRTENGGQVMYRVIQVSEGQLDGQTEGSGAISGYPATQSMTQAVIQGAFTSDDAVDTEGAAAETHYTYFPSTAVGDGSGGTTSGSTTAVVTTQGSEALLGQATPPSTGQFFVMMSPQEVLQGGSQRSIAPRTHPYSPKSEAPRTTRDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGILSKACDYIQELRQSNHRLSEELQGLDQLQLDNDVLRQQVEDLKNKNLLLRAQLRHHGLEVVIKNDSN", - "output": "chromatin ; Golgi apparatus ; nucleoplasm ; nucleus ; transcription regulator complex ; bHLH transcription factor binding ; DNA binding ; DNA-binding transcription factor activity ; DNA-binding transcription factor activity, RNA polymerase II-specific ; double-stranded DNA binding ; enzyme binding ; histone deacetylase binding ; identical protein binding ; protein heterodimerization activity ; protein homodimerization activity ; protein kinase binding ; protein-containing complex binding ; RNA polymerase II cis-regulatory region sequence-specific DNA binding ; sequence-specific DNA binding ; sequence-specific double-stranded DNA binding ; cellular response to insulin stimulus ; glucose metabolic process ; late viral transcription ; lipid homeostasis ; positive regulation of DNA-templated transcription ; positive regulation of transcription by RNA polymerase II ; positive regulation of transcription from RNA polymerase II promoter by glucose ; regulation of DNA-templated transcription ; regulation of transcription by RNA polymerase II ; response to hypoxia ; response to UV" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MDGVGKSVKLCGGPIGYIYATPKCSVPVDELAILAAKSNDCDDAVLPLVAGLTVESDFVWNVAAVAGTKTTGLGSGGTTLKLVPTHYHPCVFVFYGGDCIKPCTKAPNLTKACDLARERFGYSAYSSPAPTAFETTGQQICEALEMDAQNVMLYLVVTELFKEVIYLCNSFLHFGGSDVVTINNADVRRIPIYPLHLVLPDFNRITNEPFSEKPRALGEGAIMPKAFYNDSLCRLLHGYVLSTTAVGLRVRNIDAIARGAAHLCFDENHEGTLLPADTTFTAFTPAAETTKGQSKMGKREGSDVSGGGYERRTASLMASDATLAIENVISASVYEDPIPDVNKWPIYCNPVGYADRIEALSAYMARVAGLVGAMVFSSNSVIYMTEVGEAGSTEGKETSTTAPSFYRFFQIAAPHLSANPLVDRDGKPVSGENLSKSTSASQSEYSLDYLILACGFCPQLLARFLFYLERCDGGAKACHHDLDTVKFVSSAIDADMPCELCDKTSRIYCAHTTIKRLVYRLPKFGYQMRGAMGLFGAMTNNYCDVNALGSYAQFSTLKRSEGEASRSVMQDTYRLTVERMMKALEKEGLLTCDDPTNMASADANIRDGNSFIRAISTMKNIIESEASQLMRNLTEIREYNIREGLGDANHTLSLAVEPYASGICPVLAFLSRRTIIAVVQDMALSQCSIVMQGQQVEARNFRTQFQAVLKRRVLELQNAGFITSKTITVTLEDQQICVPDPSKSQYDSVISNMEGDLVKVTVEIFRELKVKNKVLFGGGIAGAASEATKSRLAGMVEAYQRPTKTMHVLNGPLGFAVKRYHTLLFPDVKMPNGATPNALWFWILLLRNQLPAGILSKEEEDKSLFIKKFTKSYADMNYINISPTCFGDLAQFYLANTILKYCSHKHFFINTISALVAVSRRPRDPAIVLPWIERPITKGQDVAPAAQQLIASMSDHKDIWCATFSSTNLVGSIMTTKPFVVIGISISKYHGMAGSTKVFQSGNWGNIMGGRNVCSLMSFDRTHRYVMTCPRVGFVAEQPIFSSGIKETTLIDRVRMVLSEESAAPHAAVYMLALKMVGDRVRQMELEDWMEITNDEYISSLIDELNKQVEEAEGGWNADAAMTLAKEMVNMAMSIPTDGPTFDFDACDENLEGHADGQTISETNLKRPNMNVFDLEPIPEKRVPVLSVDML", - "output": "host cell nucleus ; metal ion binding ; single-stranded DNA binding ; bidirectional double-stranded viral DNA replication ; DNA replication" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MNHIHEHLKLVPVDKIDLHETFEPLRLEKTKSSIEADDFIRHPILVTAMQHGRYMVIDGVHRYTSLKALGCKKVPVQEIHETQYSISTWQHKVPFGVWWETLQQEHRLPWTTETRQEAPFITMCHGDTEQYLYTKDLGEAHFQVWEKVVASYSGCCSVERIAQGTYPCLSQQDVLMKYQPLSYKEIEAVVHKGETVPAGVTRFNISGRCLNLQVPLALLKQDDDVEQLRNWKQFLADKFANMRCYTEKVYLVEQ", - "output": "chromosome ; ATP binding ; DNA binding ; kinase activity ; phosphotransferase activity, alcohol group as acceptor ; chromosome segregation ; phosphorylation ; positive regulation of sporulation resulting in formation of a cellular spore ; siderophore biosynthetic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MDSNTVSSFQDILMRMSKMQLGSSSEDLNGMITQFESLKLYRDSLGEAVMRMGDLHSLQNRNGKWREQLSQKFEEIRWLIEEVRHRLKITENSFEQITFMQALQLLLEVEQEIRTFSFQLI", - "output": "host cell nucleus ; virion component ; exit of virus from host cell nucleus through nuclear pore" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MSRKGSTPQRTVLPDPKHGSETIARFINMVMQSGKKSVAEKIVYGAMDVIGEKNPNAIELVQKALDNVAPAVEVKSRRVGGATYQVPVEVRSSRRMALAMRWLIDSARKRGENTMPRKLAAELLDAAESRGGAIKKREETHRMAEANKAFAHYRW", - "output": "small ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; tRNA binding ; translation" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MESAITISNHVNLAFSLSRNPSLSTKNSAGISCIKWQRPCLRNLGHVRLNQQRKGTRRKSTLVQAVAVPVAQPSAFPPTDNTEHLKQLAERYGFQQIGEPLPDDVTMRDIITSLPKQVFEINDTKAWGTVLISVTSYALGIFMIAKAPWYLLPLAWAWTGTAITGFFVIGHDCAHKSFSKNKLVEDIVGTLAFMPLIYPYEPWRFKHDQHHTKTNMLREDTAWLPIMKEDIESSPGLRKALIYAYGPLRTWMSIAHWLKVHFNLKDFRQSEVKRATISLAAVFAFMVIGWPLIIYKTGIVGWIKFWLMPWLGYHFWMSTFTIVHHTAPHIPFKSSKEWNAAQAQLSGTVHCDYPRWIEILCHDISVHIPHHISPKIPSYNLRAANQSLNENWGEYLNKPKSNWRLMRTIMTTCHIYDKDGNYVSFEKAVPEESQPISIPKRVMPDYA", - "output": "chloroplast membrane ; 1-18:1-2-16:0-digalactosyldiacylglycerol desaturase activity ; 1-18:1-2-16:0-monogalactosyldiacylglycerol acyl-lipid omega-6 desaturase activity ; 1-18:1-2-16:0-phosphatidylglycerol omega-6 desaturase activity ; 1-18:1-2-16:1-monogalactosyldiacylglyceroldesaturase activity ; 1-18:1-2-16:2-monogalactosyldiacylglycerol desaturase activity ; 1-18:1-2-16:2-monogalactosyldiacylglycerol synthase activity ; 1-18:1-2-trans-16:1-phosphatidylglycerol desaturase activity ; 1-18:2-2-16:1-monogalactosyldiacylglycerol desaturase activity (SN2-16:2 forming) ; unsaturated fatty acid biosynthetic process" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MTITQVKIKKLENFSGSLPEYATEHSAGMDLIAANEQPITIKAAAIQLIPTGIAIALPDSFEAQIRPRSGLAVKHGITVANSPGTIDADYRGEIKVILINLGKEDFIIEKGMRIAQMIIAKYERILWEESISLMETMRGSGGFGSTSV", - "output": "dUTP diphosphatase activity ; magnesium ion binding ; dUMP biosynthetic process ; dUTP catabolic process" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MSESPKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGIELHTVNFAAEYWDNVFELFLEEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIATGHYVRRADVNGKSRLLRGLDGNKDQSYFLYTLGHEQIAQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFRDFLGRYLPAQPGKIITVDGDEIGEHQGLMYHTLGQRKGLGIGGTKDGSEDPWYVVDKDVENNVLIVAQGHEHPRLMSVGLIAQQLHWVDREPFTGTLRCTVKTRYRQTDIPCTINALDDDRIEVIFDEPVAAVTPGQSAVFYSGEVCLGGGIIEQRLPLTV", - "output": "cytoplasm ; ATP binding ; sulfurtransferase activity ; tRNA binding ; tRNA modification" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MQFHSSSALITPFKKDLSVDEAAYESLIKRQIFQGMDACVPVGTTGESATLTHKEHMRCIEIAIETCKNTKTLSNSRMKVLAGVGSNATSESLSLAKFAQKIGADAILCVSPYYNRPTQQGLFEHYKTIAQSVEIPVMLYDVPSRTGVSIEISTALKLFREVPNIKAIKEASGSLKRVTELHYHEKDFKIFSGEDSLNHSIMFSGGCGVISVTGNLMPNLISQMVNCALKLEYQQALEIQNKLFHLHQALFVETNPIPIKMAMHLAGLIENPSYRLPLVAPSKETIQLLEKTLQQYEVIA", - "output": "cytoplasm ; 4-hydroxy-tetrahydrodipicolinate synthase activity ; diaminopimelate biosynthetic process ; lysine biosynthetic process via diaminopimelate" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MDLARSDIIPHLLCLFQEIIQANIQKVSEAYDLELKIMNILTLWRNGSDNLISDNDDYMKKGLFFSRSNDPLALQARYARMYDDLFKLNNYEVPDDVVRRHDNKILDIILKESSVPFWYDISDDEAHESMLPEFRLQDIHEFRLNLKRVRVVPDESEEIQMDESQSDKRRRKKRMEKSRPVWLSGSESDRRIELNDSLKPSQKFETKLSSYLLNRLMNEMNPHYCGHPLPALFVTLIMLKAYSIKNKFFSYGIRYMELVCNEIAGPDLNTRTFPVLFGSDGSFVGTRVYSHYPIKLRMILNDLTYLLTYSDLHKFQEFELDVNDEVLLHMLRTPNDGRQLKKAVTRLNHYYGLKFNPKTTDCGVVNGMDFTHKHPITKTADFTSPVLPMTNSFNKAEICYGHNSKILNRAVFTDTVRGHIREDLKNVADLDLPKLYEHVSKLVDMRVNYTIIYDLMFLRVMLNLGGYSRSNQITDFRKTIDEITKMNEGFLSGADPEKNIDTLNAWMAPTMEDCGYRLTKSILFGKFRKAKYPSDLEAKSNIDYYVTARSAGIGNLRISIETDKRKYKVRTTSKSAFVNAMGSGILDVNPVSNEPMMLTDYLLTQTPETRANLEAAIDSGSKSDSELMRILGQNSIGSRSTTAWRPVRPIYINVLQAHLAQAFIIGPHINATVNQHEYQPTSLWFTGDDLGVGFATLYQSGTADIIVPAIEASSTGKALSVLADCSSWDQTYLTATMIPYYNGIKRALLEYQQADMRNFYMIDSGRTGVPGMKLSEIVDWFNSFQTKRIFNASYLKERHSFVVKYMWSGRLDTFFMNSVQNALITRRIAEEVSLRVSNTGLSWFQVAGDDAIMVYDGSSISTTEQVTRINEITVRNYEESNHIINPQKTVISHISGEYAKIYYYAGMHFRDPSIQLHESEKDSGASDVTESLREFGQVIYEYNKRAIGTLRVNALYGRLIAGLAYSVNCPQYDASKRTYANMKYYPPPTSVIAPAAFKGGLGLSFTGLSLNEVLFIKLHLHEAVSQGLHVISMISFEANEVVSNSLSAYYLKDQKDLLRDMKLGKHLEKVKGISFKSSDLAFSGSDFSQGLNLKRESIDKVKLEVSRKSIRDLRSSGISVPSTHAYENLPYASLHQSFKSLKVDRDTSKFTNERLLVSLLEYKSDIPRVSVTSQYPVYDLINISKVDELNVRSGGPVRFISAPIEGKLLEENIGTRQGVQFKNRGYGGSQEVLHFIRSNGLVITEQALIDLIIKSGVLLMINPQRGLIDLFQSLSGDTASSMHLANFFMAEKPHWEDNAISLTIAGSLLENCDSRIENVKNFVSVLATGMQKDLQRMFYYVGFVYYAQRLIWSGGHSSKIFVSIDEDKLADFLRGSKPITRRRKAMAGTKREPINLSANFSYEISEPDREISEYDPLILCHPLSMPFFGNWQEKYSVMQSDEQM", - "output": "host cell cytoplasm ; virion component ; nucleotide binding ; RNA binding ; RNA-dependent RNA polymerase activity ; viral genome replication" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "LKCHQLIPPFWKTCPEGKNLCYKMYMVATPMIPVKRGCIDVCPKNSALVKYMCCNTDKCN", - "output": "extracellular region ; membrane ; other organism cell membrane ; toxin activity ; killing of cells of another organism" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MSTPARRRLMRDFKRMQQDPPSGVSASPLPDNVMKWNAVIIGPSDTPFEDGTFRLLLSFDEQYPNKPPQVKFISEMFHPNVYASGELCLDILQNRWSPTYDVSSILTSVQSLLNDPNISSPANVEAANLYKDHRSLYVKRVRETVENSWNDDDDEEEEEEDEDEAEDEDDDDDDNIDED", - "output": "Bre1-Rad6 ubiquitin ligase complex ; chromosome, telomeric region ; cytoplasm ; HULC complex ; MUB1-RAD6-UBR2 ubiquitin ligase complex ; nucleus ; Rad6-Rad18 complex ; RAD6-UBR2 ubiquitin ligase complex ; UBR1-RAD6 ubiquitin ligase complex ; ATP binding ; proteasome binding ; single-stranded DNA binding ; single-stranded DNA helicase activity ; ubiquitin conjugating enzyme activity ; ubiquitin-protein transferase activity ; cellular response to UV ; cytoplasm protein quality control by the ubiquitin-proteasome system ; DNA damage response ; DNA repair ; DNA-templated transcription termination ; double-strand break repair via homologous recombination ; error-free postreplication DNA repair ; error-free translesion synthesis ; error-prone translesion synthesis ; filamentous growth ; histone monoubiquitination ; histone ubiquitination ; meiotic DNA double-strand break formation ; mitotic G1 DNA damage checkpoint signaling ; negative regulation of SREBP signaling pathway ; proteasome-mediated ubiquitin-dependent protein catabolic process ; protein K63-linked ubiquitination ; protein polyubiquitination ; regulation of dipeptide transport ; sporulation resulting in formation of a cellular spore ; stress-induced homeostatically regulated protein degradation pathway ; subtelomeric heterochromatin formation ; telomere maintenance via recombination ; transcription by RNA polymerase II ; ubiquitin-dependent ERAD pathway ; ubiquitin-dependent protein catabolic process via the N-end rule pathway" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MNQLEFVKLHGNGNDFILIDELNGERIPEDEKSEASRILCHRNFGIGGDGVLFLVPSERADIGMRLFQPDGSEAEMCGNGIRCLAKHAWESGYVGERFSVETLAGVIPIQVRRDRKGFWARVEMGIPRFERSEIPADGEGTFLKVPLHGFEVSAVNTGVPHAVIFVENLDIPVEQIAPKIRHSSCFPEGANVNFVRLGNHLEVRTFERGVEAETLSCGTGSVAAAAVARRLGLVGETVEVMTKGGPLRISFAGEKAFMEGPAVTVCRGVVSDEILQTLQ", - "output": "cytoplasm ; diaminopimelate epimerase activity ; lysine biosynthetic process via diaminopimelate" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MRKLALAAIQFYRYAISPLMANHCRFHPSCSCYAHEAISTHGLLRGGWLSLRRLGRCHPWNPGGYDPVPPIKTSRSSSMAE", - "output": "plasma membrane" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MASSSCFLRSILFSSPTNLRSNHHLPTFFPKNYLICSHSTSSRFESLSVSSIGTGSTKKSSDTRRKVKSMATTNIGKEEKKRVEIYDLEENLVIDLAKFTADLSDKFCKERGAFTVVVSGGSLIKSLRKLVESPYVDSIDWARWHFFWVDERVVPKNHDDSNYKLAYDSFLSKVPIPPGNVYAINEALSAEAAADDYETCLKHLVNTNILRVSESTGFPKFDLMLLGMGPDGHVASLFPGHGLCNESKKWVVSISDSPKPPSERITFTFPVINSSAHVALVVCGSGKAEAVEAALKKTGNVPPAGSVSAEDELVWFLDKPASSKL", - "output": "chloroplast ; chloroplast stroma ; cytosol ; peroxisome ; plastid ; 6-phosphogluconolactonase activity ; carbohydrate metabolic process ; cellular response to redox state ; defense response to bacterium ; defense response to oomycetes ; nitrate assimilation ; pentose-phosphate shunt, oxidative branch" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MEIKNKTRIGHVISDKMEKTIVVGIDVVKRHPLYKKTYRRTMKYLVHDEKNEAKIGDMIEIVECRPISKGKYWRLSKIITKGHIVAAQEA", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MREILHIQGGQCGNQIGAKFWEVICDEHGIDQTGKYAGDSDLQLERINVYYNEASGGRFVPRAVLMDLEPGTMDSLRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPTGLSMSSTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATADEEEEYDEEEEEEAA", - "output": "cytoplasm ; microtubule ; GTP binding ; GTPase activity ; metal ion binding ; structural constituent of cytoskeleton ; microtubule cytoskeleton organization ; mitotic cell cycle" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MDYIVGFVSISLVALLYFLLFKPKHTNLPPSPPAWPIVGHLPDLISKNSPPFLDYMSNIAQKYGPLIHLKFGLHSSIFASTKEAAMEVLQTNDKVLSGRQPLPCFRIKPHIDYSILWSDSNSYWKKGRKILHTEIFSQKMLQAQEKNRERVAGNLVNFIMTKVGDVVELRSWLFGCALNVLGHVVFSKDVFEYSDQSDEVGMDKLIHGMLMTGGDFDVASYFPVLARFDLHGLKRKMDEQFKLLIKIWEGEVLARRANRNPEPKDMLDVLIANDFNEHQINAMFMETFGPGSDTNSNIIEWALAQLIKNPDKLAKLREELDRVVGRSSTVKESHFSELPYLQACVKETMRLYPPISIMIPHRCMETCQVMGYTIPKGMDVHVNAHAIGRDPKDWKDPLKFQPERFLDSDIEYNGKQFQFIPFGSGRRICPGRPLAVRIIPLVLASLVHAFGWELPDGVPNEKLDMEELFTLSLCMAKPLRVIPKVRI", - "output": "endoplasmic reticulum membrane ; berbamunine synthase activity ; heme binding ; iron ion binding ; monooxygenase activity ; aromatic compound biosynthetic process ; berbamunine biosynthetic process" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MKVMDALQSGRRKPLPVALLCILVTVFCVLECHGADLTSPTKKSAPLRITKPQPTSQQAKPISITTRAPTTVASTTDDEVSSSVDGQLAPLISSTTEGPSSGTTASLVPEICLNGLQLTVNSADEGTVIRKQEEFVKILEGDVVLSVLTKDPDSALFVINRVNQANLIMADFEIGIRAISIDNASLAENLLIQEVQFLQQCTTYSMGIFVDWELYKQLESVIKDLEYNIWPIPGTRAHLFPKVAHLLHQMPWGEKIASVEIATETLEMYNEFMEAARQEHMCLMHFKSDDNVYIMFGNKLASHFKENGTLFSVPTDRTDDEFLADLPNRAFVLMENEIDLSTAVELDATPTALDEILIGKSVLPSRVLSFAGSIIDLMNWLRGSLSKHCKRGEEHDLYVLESCFNFLNFIEDWRTSEYRQAHDTAEILSLLLMRKLGTAMNFQMYQKKVLTLDKITGESRTELREIASQNFVTNVTTYYHYNRDNHTSLELKTKFGQVFNCQYSAGDNRRYPFLFDGESVMFWRIKMDTWVATGLTAAILGLIATLAILVFIVVRISLGDVFEGNPTTSILLLLSLILVFCSFVPYSIEYVGEQRNSHVTFEDAQTLNTLCAVRVFIMTLVYCFVFSLLLCRAVMLASIGSEGGFLSHVNGYIQAVICAFSVVAQVGMSVQLLVVMHVASETVSCENIYYGRWLWGLLAYDFALLCCVGALIPSIYRSQRNYREGILIVIGSVLIMVIWVAWIALSLFGDEWRDAAIPLGLQASGWAVLVGILIPRTFLIVRGIERSDIAQALPSLTSLAFAQNNQYSSEQSVYECVNPAMRHCSQDEVNHQSPSEIPTLPLRGGGPRRQQFFANLRQANANINPQRPPPRPQQSPSRSSVSSLPPSPDHNKITRF", - "output": "plasma membrane ; postsynapse ; rhabdomere microvillus membrane ; adenylate cyclase inhibiting G protein-coupled glutamate receptor activity ; receptor ligand activity ; sevenless binding ; germ-line stem-cell niche homeostasis ; glucose homeostasis ; lipid homeostasis ; R7 cell fate commitment ; R8 cell-mediated photoreceptor organization ; response to glucose ; sevenless signaling pathway ; visual perception" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MAKVNLYISNDAYEKINAIIEKRRQEGAREKDVSFSATASMLLELGLRVYEAQMERKESAFNQAEFNKLLLECVVKTQSTVAKILGIESLSPHVSGNPKFEYSNMVEDIREKVSVEMERFFPKNDDE", - "output": "cytoplasm ; DNA binding" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MADKEATVYIVDLGESMADCHNGRDESDLDFGMRYVWDKISTTVAASRKTWTLGVVGLNTEETNNAQDSEGLEGYEHISVLQDIGPMTMTQLRELRSSIQTSHTYGGDAISGIVVALAMIELFTKKLKYNRRIILVTNGESPIDDESSEDVANRLNYSNIELIVIGVDFDDADYGFKEEDKSKGKARNEKTLRKLVEQCNNGVFGTMQQAVEELAIPRIKPVRPFKAYDGALTLGDPEKYKSALSIHVERYFKTKRAPAPPASTVVVNSEPGGASQSETLNEDTEMGDAEFSGVKHMRTYRVNDPDAPGGKRDVEFEDLAKGYQYGRTVVPFSESDFSITKLETKKSFTILGFIPFSSYNPFLNLGETGIVVAQKHNEEAELGLSALIHALHELESYAVARYVQKDGAQPQLVLLKPNPAIEDDFECLYDVPLPFAEDLRSYQFPPLDKVLTVTGNIIKEHRLLPSEDLKQAMSDFVDAMDLSGFDVDEDGKPTEYAPIDETYNPTIHRMNQAIRARAVDPDAPIKPPAEILLRFSKPPEKLIEKAKPEIEALIDAAEIKKVPAKAQGRGSRKEPVKPLSGLDIDSLLGESKRTTISLDNAVPEFKQILATAADDATIESAAKQMGQIVRKLIQDSFADLFYARAAENLRVMREELISLEVPGLYNKFLTGLKKSILSGELDGDRREMWFKHIVGGHLSLITQDESEVSEVTAEEAKALCAWSRPNITYRYFRDTA", - "output": "chromosome, telomeric region ; Ku70:Ku80 complex ; ATP binding ; ATP hydrolysis activity ; damaged DNA binding ; helicase activity ; telomeric DNA binding ; DNA recombination ; double-strand break repair via nonhomologous end joining ; telomere maintenance" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MTTEPGYLSPSVAVATSMPKRGVGAAVLIVPVVSTGEEDRPGAVVASAEPFLRADTVAEIEAGLRALDATGASDQVHRLAVPSLPVGSVLTVGLGKPRREWPADTIRCAAGVAARALNSSEAVITTLAELPGDGICSATVEGLILGSYRFSAFRSDKTAPKDAGLRKITVLCCAKDAKKRALHGAAVATAVATARDLVNTPPSHLFPAELAKRAKTLSESVGLDVEVIDEKALKKAGYGGVIGVGQGSSRPPRLVRLIHRGSRLAKNPQKAKKVALVGKGITFDTGGISIKPAASMHHMTSDMGGAAAVIATVTLAARLRLPIDVIATVPMAENMPSATAQRPGDVLTQYGGTTVEVLNTDAEGRLILADAIVRACEDKPDYLIETSTLTGAQTVALGTRIPGVMGSDEFRDRVAAISQRVGENGWPMPLPDDLKDDLKSTVADLANVSGQRFAGMLVAGVFLREFVAESVDWAHIDVAGPAYNTGSAWGYTPKGATGVPTRTMFAVLEDIAKNG", - "output": "cytoplasm ; manganese ion binding ; metalloaminopeptidase activity ; proteolysis" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MTIAFQLAVFALIATSSVLVISVPLVFASPDGWSNNKNVVFSGTSLWIGLVFLVAILNSLIS", - "output": "chloroplast thylakoid membrane ; photosystem II reaction center ; photosynthesis ; photosystem II stabilization" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MAIQTQLPCDGDGVCMRCQVNPPSEETLTCGTCVTPWHVSCLLPESLASSTGDWECPDCSGVVVPSAAPGTGISGPESSGSVLVTAIRAIQADVTLTEAEKAKKRQRLMSGGGDDGVDDEEKKKLEIFCSICIQLPERPVTTPCGHNFCLKCFEKWAVGQGKLTCMICRSKIPRHVAKNPRINLALVSAIRLANVTKCSGEATAAKVHHIIRNQDRPDKAFTTERAVKTGKANAASGKFFVTIPRDHFGPIPAANDVTRNQGVLVGESWEDRQECRQWGVHFPHVAGIAGQAAVGAQSVALSGGYDDDEDHGEWFLYTGSGGRDLSGNKRVNKIQSSDQAFKNMNEALRLSCKMGYPVRVVRSWKEKRSAYAPAEGVRYDGVYRIEKCWSNVGVQGLHKMCRYLFVRCDNEPAPWTSDEHGDRPRPLPDVPELENATDLFVRKESPSWGFDEAEGRWKWMKSPPVSRMALDTEERKKNKRAKKGNNAMKARLLKEFSCQICRKVLSLPVTTPCAHNFCKACLEAKFAGITQLRDRSNGVRKLRAKKNIMTCPCCTTDLSEFLQNPQVNREMMEIIENFKKSEEEAEVAESSNISEEEGEEESEPPTKKIKMDKNSVGGTSLSA", - "output": "nucleus ; histone binding ; metal ion binding ; methyl-CpG binding ; methyl-CpNpG binding ; methyl-CpNpN binding ; ubiquitin protein ligase activity ; ubiquitin-protein transferase activity ; negative regulation of gene expression via CpG island methylation ; positive regulation of DNA methylation-dependent heterochromatin formation ; protein ubiquitination" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MFAIFQTGGKQYKVQQGEKIYVEKLDLEVGSKISFDQVIMVEGSVGTPFVKNAVVNATVIKQGKQKKINIIKFKSKKHHLKRQGHRQPYTQLVIDSISVK", - "output": "cytoplasm ; ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MAGTGHTPEEALALLKRGAEEIVPEEELLAKLKEGRPLTVKLGADPTRPDLHLGHAVVLRKMRQFQELGHKVVLIIGDFTGMIGDPSGRSKTRPPLTLEETRENAKTYVAQAGKILRQEPHLFELRYNSEWLEGLTFKEVVRLTSLMTVAQMLEREDFKKRYEAGIPISLHELLYPFAQAYDSVAIRADVEMGGTDQRFNLLVGREVQRAYGQSPQVCFLMPLLVGLDGREKMSKSLDNYIGLTEPPEAMFKKLMRVPDPLLPSYFRLLTDLEEEEIEALLKAGPVPAHRVLARLLTAAYALPQIPPRIDRAFYESLGYAWEAFGRDKEAGPEEVRRAEARYDEVAKGGIPEEIPEVTIPASELKEGRIWVARLFTLAGLTPSNAEARRLIQNRGLRLDGEVLTDPMLQVDLSRPRILQRGKDRFVRVRLSD", - "output": "cytoplasm ; ATP binding ; RNA binding ; tyrosine-tRNA ligase activity ; tyrosyl-tRNA aminoacylation" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MAEAAPQDAQQNFAIQRIFLKDVSFEAPNSPVMFQKEWNPDVKLDLDTQSRELGEGVYEIVLRLTVTVKNEEETAFLCEVQQGGIFTAEKMEAGQLAHCLGAFCPNILFPYARETISSLVVKGTFPQLNLAPVNFDALFMNYLQQQAQQGEAEA", - "output": "cytoplasm ; unfolded protein binding ; protein folding ; protein tetramerization ; protein transport" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MTDMNKWRHIFKLDPAKPISDEDLMKICTSDTDAIMIGGTDDITEENVAHLMHKVKCYSLPIVLEISNLESVVPGFDLYFIPTVLNSRDVKYHNGLLLEALKSYGTLIDFNEVVFEGYVVLNPDCKVAKLTQADTMIDDEDIEAYAQMINDMYQLPVMYIEYSGVYGETNLVKAAADMLTETQLFYGGGISNYEEAEMMASIADTIIVGNIIYEDINKALKTVKVKETH", - "output": "magnesium ion binding ; polyprenyltransferase activity ; glycerophospholipid biosynthetic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MMRGGMGNMNNMMKQMQKMQKEMAKAQEELGEKTVEGTAGGGMITVIANGHKQILEVKVKEEVVDPEDIEMLQDLVLAATNDALKKADELSNSTMGKFTKGLNLPGGMF", - "output": "bacterial nucleoid ; cytoplasm ; DNA binding" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MKRVAILGSTGSIGVQALDVVGRFPDRFEVVGLAAGRNAPRLLEQIRRFRPRVVSVCDEAAARAVRAEAPPGTEVLSGDAGAVAVASHPDAAFVLAAISGGAGLRSTAAAIEAGKPVGLANKESMVLAGELLMARAAAKGVPILPVDSEHSAIHQSLVGHNRGEVRRLILTASGGPLRCTPEAELATVTPERALKHPNWSMGDKITIDSATLMNKGLEVIEARWLFGVEQQRIDIVVHPESVVHSMVEYVDGSIVAQLGISDMRGPISYAMGHPERMPLDLPPLDLGRLGKLTFEPPDPARFPAYTLAYRALELGGTAPAVLSGADEAAVAAFLARRCSFTGIAEVCADVLEAHVVEPVRSVEQALAASEHGRREAEKRVGARAHAPAGR", - "output": "1-deoxy-D-xylulose-5-phosphate reductoisomerase activity ; metal ion binding ; NADPH binding ; isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway ; terpenoid biosynthetic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MSGVNEIRSTFLNFFAANGHEIVPSSPLVPRNDPTLMFTNAGMVQFKNVFTGVEKRPYHRATTSQKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKENAIELAWKLVTKEFGLPKDKLTATVYIDDDEAFGLWKKIAGLPESRIIRIAGSDNFWQMGDTGPCGPCSEIFYDHGDKVWGGPPGSPEADGDRFIEIWNLVFMQYEQLEGGVRNPLPKPSIDTGAGLERVAAVLQGKHDNYDIDLFVALIRAIADLTNADPQGPQKASLRVIADHLRASSFLISDGVLPSNEGRGYVLRRIMRRAMRHAQLLGAREPLMHKLVGALTREMGQAYPELIRAEALIKETLRLEETRFRKTLERGLAILDEKSSTLKKGDMFDGDVAFTLYDTYGFPLDLTQDALKSRGISVDQASFTDAMERQRAKARAAWAGSGEAATENVWFPLREKLGATEFLGYETETAEGAVTALVKDGAEVEGLKAGESGAIVLNQTPFYGESGGQVGDTGVMSGDGVRVRITDTQKKAGDLFVHIGTVEQGTLKLGAALQLEVDHGRRSAIRANHSATHILHEALRQVLGDHIAQRGSLVSPDRLRFDFAHPKPISAEELARVEDIANDVVLENAEVTTRLMALDDAREAGARALFGEKYGDEVRVVSMGNAARDQASNAQASNAMGWSVELCGGTHVKRTGDIGLIAVTSESAVSSGVRRIEALTARGARAHANHNLSLAKAAAAELRTTVDEVPARIAALMEERKKLERELSDARKKLAMGGGAAAGGSASGIREVAGVKLMARAVEGVEMKDLKSLVDEAKKQLGSGVVAIVGRAEDGKAGVVVGVTADLTARFNAVELVRAASEALGGKGGGGRPDMAQAGGPDGSKAEAALAAIESAISRAG", - "output": "cytoplasm ; alanine-tRNA ligase activity ; ATP binding ; tRNA binding ; zinc ion binding ; alanyl-tRNA aminoacylation" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MTVSENSVLETEVLVGGSAMPNERPGAMEPQNLSKMPEGFPRRSTVANGVRSRASRRFLVVGGALLLSLFAIYEMGAVFSIGGITPLEYLVLALFAVNFCWIALAFCSGIAGFLILLRKPRAKDLQVTELHTRTAILMPTYNESPDRVFSAVSVMAETLSQTGHGHAFDWFILSDTTDPDIALLEEQAFLVLRQETHKHSRVYYRRRRKNVARKAGNVADFCRRWGSRYDHLLVLDADSLMESSTITGLAQRMQADPDAGLIQTIPSLINGTTLMARLQQFAARIYGPVIGTGLGWWVQKEGNFWGHNAIIRTEAFMTAAGLPNLKGKPPFGGHIMSHDFVEAALIRRAGWSVVIAYDLPGSYEECPPSIIDLAVRDRRWCQGNLQHSRILPTKGLHWVSRLHLLTGIMAYLSSPFWLMLILTGLMLALQAHFIRPEYFTDQFSLFPTWPIMDSDRALRLFYITMGVLFGPKVFGVLLLLKDGEFARSVGGRIKAIFSVIFEVILSALIAPIMMFIHCGAVMSILMGRDSGWSPQRRDDGSMPWMTLIYRHRWHMLAGVMLGYAAILDSLTLLAWMSPALIGLWIAVPISAWTGSVKIGEVFKRAGILATPEERNPAQICLQAHEARAAYQKHIAEPWTLAQVLKDPALMELHLAMVDKQPLRAAGTPIEAMEAIVHVKVHEARCQQSALAVLNRQEMAMVLANPLMLRSLQKLPEQFVEEDLVSFC", - "output": "plasma membrane ; hexosyltransferase activity ; glucan biosynthetic process" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MTEPVTQPALVIPQLIVGLGNPEPKYDQTRHNIGFAAVDALARAWNISLAENRKFQGQYGEGTAPGGVKIRLLKPLTYMNRSGQAIQAVTSWYKLSGESVLVIYDDLDLPLGKTRLRLSGSAGGHNGMKSAIAHLSTQNFPRLRIGIGKPKNAVNGDNSETVSHVLGKFSATETQLMSLVLQFVVECVELSLKQGVEKAMNRCNSYTVEAPKS", - "output": "cytoplasm ; aminoacyl-tRNA hydrolase activity ; translation" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MWFKNLTLYRFNKPFAVETEALETALADFTFSPCSSQDVSKFGFSNALGKKGSSLVHSADNRHLICVTKEEKILPGQVIKEALEEKVALIEDEENRKMAKKEKDALKDEIITSLLPRAFSRRSQTHALILPELEMILVDSSSATKAEELLALLRKALGSLPVIPLSFKAPVESNLTEWLKLGSAPLPFEMQDEAELKSEADEGGIVRFKQQDLKEDEVLAHLATGKQVHKLALHFGQSIALLLQSDASVKRLKFSEEFRAGNDEVGTDDPMARLDADFALMGSELVALMHALVAALGGLEEAQV", - "output": "cytoplasm ; nucleoid ; DNA recombination" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MKYPTLLDRFLVYVKENTRSDENSTTTPSTQNQVEFAQNILLPEMERIGLQNVHYLPNGFAVGTLPANDPSLTRKIGFIAHMDTADFNAEGVNPQIIENYDGNPIALGTSGYELHPKDFPQLANYHGQILITTDGTTLLGSDDKSGIAEIMTAIEFLIQNPDIKHCEIRVGFGPDEEIGVGADKFDVKDFDVDFAYTMDGGPLGELQYETFSAAGAKIDFLGRNVHPGSAKDQMINAFQMAIDFHNALPETDRPEKTEGYEGFFHLMNMEGSVDTASTTYIIRDFEEEDFQARKQLMLDIAEKMNANFDTPRVIVNLHDQYYNMKKIIEKDMTPINIAKDVMENLGIKPLIEPVRGGTDGSKISFMGIPTPNIFAGGENMHGRFEFVSLETMEKAVDVILGIVAYK", - "output": "cytoplasm ; metallopeptidase activity ; tripeptide aminopeptidase activity ; zinc ion binding ; peptide catabolic process ; proteolysis" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MSGNIGANPIGKKVNISCSLDEAIDELLMESALKSGWSKKREAELRLEDHLRRFSLVPAEEQYIEKKVD", - "output": "cytoplasm ; DNA binding" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MSTPRIALIAHDAKKDDIVALAGAYRATLAQCRLVATGTTGGRIAQAHGLDVERKLSGPLGGDLQIGAELADGRVDIVIFLRDPMTAQPHDPDITALVRACDVHDVPVATNVATARVLLDDLARRLTANA", - "output": "methylglyoxal synthase activity ; methylglyoxal biosynthetic process" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "KKGVTLREDDRFPCNAGNCACLPLDSYSYTCQSPTSSTANCEGNECRSEADW", - "output": "extracellular region ; ion channel regulator activity ; toxin activity" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MLHKKTLLFAALSAALWGGATQAADAAVVASLKPVGFIASAIADGVTETEVLLPDGASEHDYSLRPSDVKRLQNADLVVWVGPEMEAFMQKPVSKLPGAKQVTIAQLEDVKPLLMKSIHGDDDDHDHAEKSDEDHHHGDFNMHLWLSPEIARATAVAIHGKLVELMPQSRAKLDANLKDFEAQLASTETQVGNELAPLKGKGYFVFHDAYGYFEKQFGLTPLGHFTVNPEIQPGAQRLHEIRTQLVEQKATCVFAEPQFRPAVVESVARGTSVRMGTLDPLGTNIKLGKTSYSEFLSQLANQYASCLKGD", - "output": "ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing ; periplasmic space ; zinc ion binding ; cell adhesion ; zinc ion import across plasma membrane ; zinc ion transport" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MGSGSSSYRPKAIYLDIDGRIQKVIFSKYCNSSDIMDLFCIATGLPRNTTISLLTTDDAMVSIDPTMPANSERTPYKVRPVAIKQLSAGVEDKRTTSRGQSAERPLRDRRVVGLEQPRREGAFESGQVEPRPREPQGCCQEGQRIPPEREELIQSVLAQVAEQFSRAFKINELKAEVANHLAVLEKRVELEGLKVVEIEKCKSDIKKMREELAARSSRTNCPCKYSFLDNHKKLTPRRDVPTYPKYLLSPETIEALRKPTFDVWLWEPNEMLSCLEHMYHDLGLVRDFSINPVTLRRWLFCVHDNYRNNPFHNFRHCFCVAQMMYSMVWLCSLQENFSQMDILILMTAAICHDLDHPGYNNTYQINARTELAVRYNDISPLENHHCAVAFQILAEPECNIFSNIPPDGFKQIRQGMITLILATDMARHAEIMDSFKEKMENFDYSNEEHMTLLKMILIKCCDISNEVRPMEVAEPWVDCLLEEYFMQSDREKSEGLPVAPFMDRDKVTKATAQIGFIKFVLIPMFETVTKLFPMVEEIMLQPLWESRDRYEELKRIDDAMKELQKKTDSLTSGATEKSRERSRDVKNSEGDCA", - "output": "endoplasmic reticulum ; Golgi apparatus ; perinuclear region of cytoplasm ; ruffle membrane ; sarcolemma ; 3',5'-cyclic-GMP phosphodiesterase activity ; metal ion binding ; cGMP catabolic process ; cGMP metabolic process ; cGMP-mediated signaling ; positive regulation of cardiac muscle hypertrophy" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MQLTVTNDVNGEVYGPLELSGDMMLMDLVALLEVDCAFESGKQQLYFNGKELKPDVEKTLEELGIGNDDLIVIRGQPVSSNSIANSTSAIELDDDAYVEQFRLQLLSNSALRNSLRMPFADIDSLVNDPQQFKTHMGPVIIQRRRMQSAMPTNPYGIPDEEYKKLMTNPEDPEHKKRLQELQDKQLIDEQLRNALEYTPEVFAQVSMLYINMEINGHPVKAFVDSGAQMTIISPRLAEKTELKRFIDNRFIGEARGVGTGKILGRVHQVQVKIETQFIPCSFVVLDSNVDLLLGLDMLKRHQACIDLEKNVLRIAGTETKFLGEAEIPKGTSFDAVGNPQPPVEIKESADHSKKKMKTSFTITPKVKPVKADNLLNNSSPMGNTGRTFPEKTIKQLMDLGFSRQEVIQALVSTNGNAEFAASLLFQ", - "output": "cytoplasm ; plasma membrane ; aspartic-type endopeptidase activity ; polyubiquitin modification-dependent protein binding ; proteasome regulatory particle binding ; protein-macromolecule adaptor activity ; SNARE binding ; ubiquitin binding ; positive regulation of DNA replication ; protein secretion ; protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MADGTHSTHRNPSTAQLIELALSRGEGELTANGALVAKTGERTGRSPNDRFIVKEPGSEADIDWGTVNKPFEQTVFTALWNRVESYLGDKELFVSDLEVGADPEHYQPVRVTTETAWHQLFARNLFIVPEQFNAADKPIWQIMNAPGFECIPERDGTHSDATVIINFAERKVLLAGLKYAGEMKKSMFSVQNFLLPAKGVLPMHCSANVGIKGDTTLFFGLSGTGKTTLSADPKRFLIGDDEHGWAPGGVFNIEGGCYAKCIDLSQKNEPVIWNAIRFGTVLENVTMDENRVPDYTDSTLTENSRAAYPLEHIELRKEENLGAEPHAVVFLTCDVSGVLPPVSILTKEQAAYHFLSGYTAKVGSTEMGSSSAIQSTFSTCFGAPFFPRPAGVYAELLMKRIESFGSQVYLVNTGWTGGPHGIGKRFDIPTTRAIVDAIVNDDLKGVETEHLAKLNLNVPLAIPGVETKLLNPVNTWEDKAKYAEYAQQLAESFTENFAKYQVPDSIKNAGPNA", - "output": "cytoplasm ; ATP binding ; metal ion binding ; phosphoenolpyruvate carboxykinase (ATP) activity ; gluconeogenesis" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MTGGQSCSSNMIVWIPDEKEVFVKGELMSTDINKNKFTGQEEQIGIVHPLDSTEVSNLVQVRISDVFPVNPSTFDKVENMSELTHLNEPSVLYNLEKRYDCDLIYTYSGLFLVAINPYHNLNLYSEDHINLYHNKHNRLSKSRLDENSHEKLPPHIFAIAEEAYENLLSEGKDQSILVTGESGAGKTENTKKILQYLASITSGSPSNIAPVSGSSIVESFEMKILQSNPILESFGNAQTVRNNNSSRFGKFIKIEFNEHGMINGAHIEWYLLEKSRIVHQNSKERNYHIFYQLLSGLDDSELKNLRLKSRNVKDYKILSNSNQDIIPGINDVENFKELLSALNIIGFSKDQIRWIFQVVAIILLIGNIEFVSDRAEQASFKNDVSAICSNLGVDEKDFQTAILRPRSKAGKEWVSQSKNSQQAKFILNALSRNLYERLFGYIVDMINKNLDHGSATLNYIGLLDIAGFEIFENNSFEQLCINYTNEKLQQFFNNHMFVLEQSEYLKENIQWDYIDYGKDLQLTIDLIESKGPPTGVLPLLDEEAVLPKSTDESFYSKLISTWDQNSSKFKRSRLKNGFILKHYAGDVEYTVEGWLSKNKDPLNDNLLSLLSSSQNDIISKLFQPEGEKSSSAGVEANISNQEVKKSARTSTFKTTSSRHREQQITLLNQLASTHPHFVRCIIPNNVKKVKTFNRRLILDQLRCNGVLEGIRLAREGYPNRIAFQEFFQRYRILYPENSTTTTFSSKLKASTKQNCEFLLTSLQLDTKVYKIGNTKLFFKAGVLADLEKQKDVKLNNIMIKLTATIRGYTVRKEITYHLQKLKKTRVIGNTFRLYNRLVKEDPWFNLFIRIKPLLTSSNDMTRTKKFNEQINKLKNDLQEMESKKKFLEEKNQKTVNELENTQDLLNQEKENLRKNESLLNRVKTSSETLQKQFDDLVSEKDEISREKLEVAQNLEEAHQKIQGLQETIREREATLEKLHSKNNELIKQISDLNCDISKEQSSQSLIKESKLKLENEIKRLKDVINSKEEEIKSFNDKLSSSEEDLDIKLVTLEKNCNIAMSRLQSLVTENSDLRSKNENFKKEKAALNNQLKNKESELLKMKEKIDNHKKELATFSKQRDDAVSEHGKITAELKETRIQLTEYKSNYQKIKEEYSNFQRETKEQEQKKRNSLVESLNDSKIKELEARLSQEISLNQYLNKRISGNSVETNISSTRRSTSYSDDPLDKEDIIKKYYDLQLAFTEITRNLENEIEEKKNLISRLRFTETRLASSSFEDQKIKAQMKKLKKLIQDMDPSIPLDSILNEPLDNCPDKESDINKLMLEVDYLKRQLDIETRAHYDAENAISALHSKFRKIQGESSLSSSDIYKLKFEASEERVKSLEDKLKTMPLRDRTNLPVGDIIKNRDSISKYEEEIRYYKLENYKLQEILNESNGKLSQLTLDLRQSKSKEALLSEQLDRLQKDLESTERQKELLSSTIKQQKQQFENCMDDLQGNELRLREHIHALKQAEEDVKNMASIIEKLKTQNKQKEKLIWEREMERNDSDMQLQETLLELKRVQDVKKILSDDLAHLKERLSAVEDRSQYTDEINRLKEELNCSLKAETNLKKEFATLKYKLETSTNDSEAKISDLLKQLDHYTKVVEMLNNEKDAISLAEKELYQKYEALNTECESLKGKIVSLTKIKQELESDLNQKTDALQISNAALSSSTQKNKEITEKIKYLEETLQLQMEQNSRNGELVKTLQASCNGYKDKFDDEKQKNIDLYEENQTLQKLNTDLQLQLKNLHERLSDTTEKNAWLSKIHELENMVSLETDLKYEEMKKNKSLERAVEELQTKNSQQTDVIELANKNRSEFEEATLKYEAQISDLEKYISQQELEMKKSIRDNSSYRDKVQEMAQEIEFWKSRYESTMIGSKNIDSNNAQSKIFS", - "output": "cellular bud neck ; cellular bud neck contractile ring ; cytoplasm ; incipient cellular bud site ; mitotic actomyosin contractile ring ; myosin filament ; myosin II complex ; actin filament binding ; ATP binding ; microfilament motor activity ; myosin II light chain binding ; myosin light chain binding ; mitotic actomyosin contractile ring assembly ; mitotic actomyosin contractile ring contraction ; primary cell septum biogenesis ; protein localization to mitotic actomyosin contractile ring ; septum digestion after cytokinesis" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MEQQNKRGLKRKALLGGVLGLGGLAMAGCEVAPPGGVLGDFLRMGWPDGITPEAVAMGNFWSWVWVAAWIIGIIMWGLFLTAIFAWGAKRAEKRGEGEFPKQLQYNVPLELVLTIVPIIIVMVLFFFTVQTQDKVTALDKNPEVTVDVTAYQWNWKFGYSEIDGSLAPGGQDYQGSDPERQAAAEASKKDPSGDNPIHGNSKSDVSYLEFNRIETLGTTDEIPVMVLPVNTPIEFNLASADVAHSFWVPEFLFKRDAYAHPEANKSQRVFQIEEITEEGAFVGRCAEMCGTYHAMMNFELRVVDRDSFAEYISFRDSNPDATNAQALEHIGQAPYATSTSPFVSDRTATRDGENTQSNA", - "output": "plasma membrane ; respirasome ; copper ion binding ; cytochrome-c oxidase activity" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MQVTETTSEGLKREFQVLLPANELEDRLNTELSNIKGKVQIKGFRPGKVPVAHLRKVYGKSVMADVLQNAVNEANQQIVSDKGLRLALEPQIEFPKDEEQTIIERALDAKGDLAFKVKLEVLPSFELADLSDVSIKKLVLKPSDEEVNETLERMAKDSRSFEPREEGAEAQSGDRVTIDFVGRIDGTEFEGGKGEDVDLELGSNTFIPGFEDQLVGAKVGDARLVKVAFPADYQAEQLAGKDAEFDVTVKAVAAPGETKIDDELAKRFGMDDLEKLKEAVSKAVGADYEAQSRRKLKKELLDALDGKYAFDLPPSLVHQEFAAVWAQVEQDLKNRGKTFEDEGTTEEASQAEYRKIAERRVRLGLVLAQVGETADIKVSDDEVNQALFARIRQFPGQEKQVYDFYRNNPQALAELRAPLFEEKVVDHVLGQVQVVEEPVSKEALFAEDDEADAVTGAAATDEKPSESSNEAAADKAAG", - "output": "cytoplasm ; peptidyl-prolyl cis-trans isomerase activity ; cell cycle ; cell division ; protein folding ; protein transport" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MDMKKRIHLELRNRTPSDVKELVLDNCRSNEGKIEGLTDEFEELEFLSTINVGLTSVTNLPKLNKLKKLELSDNRISGGLEVLAGKCPNLTHLNLSGNKIKDLSTIEPLKKLESLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYDKEDKEAPDSDAEAYVEGLDDEDDEEDEGEEEDYDEDAAPGEEDEEEGEEDDEEEGEEEEEEDISGEEEEEEELNDGEVDDEEDFEEERGLKRKRELDEEGEEDDD", - "output": "cytoplasm ; endoplasmic reticulum ; nucleus ; perinuclear region of cytoplasm ; histone binding ; nucleocytoplasmic transport ; regulation of apoptotic process" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MNPLLELLDVHRTYQIGETTVNALRGVSLTIDRGEFVAIMGASGSGKSSLLQILGLLDNPDKGEFKILGNNVNTLSEDEQAGVRNNVAGFVFQQFHLLKRMTIVDNVRLPHIYSGLKGDFRQEAIARLKLVGLEERIDHTPNQLSGGEQQRVAIARALVRDPLIIFADEPTGNLDSKNSAEIMKIFTALHEEGKTIIMVTHENDIAAYACRVIIMKDGLIVSDERKAEMQPSRAVTGESAFDISGSGKGSIWQDGRFTGFMAQAFQSILANKMRTFLSVLGIFVGVASVIAMMALGEGAKSAMQEQLKSMGSNMLSIRGGSAKIRGAAQGAGAVARFSFNDVNDIASLGKLVKNASGVVNGSARIVYGNKNWSSTLTGVGFDYGTMRASIPAIGRWFTREEIQIREKSAIIGVTVVKEIFGSSNPIGKTIKINRINFKVIGIAPAKGFSGPQDEDDVVIIPVTTAMYRVLGKDYLSSIFVEVASPGLMGQAKTAITELIRKKHRLEEGDDSFNIRDMTEIQKMLSSTTQTMSLLLGSIAAISLLVGGIGIMNIMLVSVTERTREIGLRKAIGARKNDIMLQFLIESVGMTISGGLIGVFAGVGISLILAFFAGWAVKTSLLSVVLATTFSALIGVFFGLWPARKAAALKPVEALRYE", - "output": "plasma membrane ; ATP binding ; ATP hydrolysis activity ; response to antibiotic" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MIKVAVNGAAGRMGGRLITAIKETEGLQLTGALEHAESPMLGQDAGLTAGCGPLDVLISSDLDEVLKATDVLIDFTFPEVSLRNLEACVRHDKSIVIGSTGFTPEQRARVDEMAQNIPVVLAPNMSVGVNACFKLLKEAAQILGDGFDVEIVELHHNKKKDSPSGTAVRMGEIVADALGRDYNKSAVYHREGMCGARTPEEIGMQTVRGGDIVGEHTVYFIGMGERIEITHRAMSRDMFARGAVRAASWLAGKAPGLYDMQDILGLK", - "output": "cytoplasm ; 4-hydroxy-tetrahydrodipicolinate reductase ; NAD binding ; NADP binding ; oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor ; diaminopimelate biosynthetic process ; lysine biosynthetic process via diaminopimelate" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MLNPPLNQLTSQIKSKYLIATTAAKRAREIDEQPETELLSEYHSFKPVGRALEEIADGKIRPVISSDYYGKE", - "output": "DNA-directed RNA polymerase complex ; DNA binding ; DNA-directed 5'-3' RNA polymerase activity ; DNA-templated transcription" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MIVEPTVATYNTSDFRKGLKVQIDGEPYLITEMNFVKPGKGNAMYKCKMKNLIRGTTLDRTYKGGDSLEAADVETTTVQFLYRQGQDYVFMDGTTFEQYEVPNEVAGDIWKYLKDGTECSMTLYNGAAIIVEPPQHVQLEVTECGPGTKGDTATNVTKPAMVETGAEFNVPGFIKEGNIIKINTLNNEYVERVNN", - "output": "cytoplasm ; translation elongation factor activity" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MTSETRTLYSQLPAIDRLLHDSAFLSLRDRYGHTQVVDLLRRMLDDARDVIRNTQTLPDWYADWAQEAKLRLENAAQSALRPVINLTGTVLHTNLGRALQAQEAIEAVTQAMRAPVTLEYDLDGAGRGHRDRALATLLCRITGAEDACIVNNNAAAVLLMLAATASGKEVVVSRGELVEIGGAFRIPDVMRQAGCTLHEVGTTNRTHAKDYRQAVNENTGLLMKVHTSNYSIEGFTKTVEEAELAEIGRELDIPVVADLGSGSLVDLSQYGLPKEPMPQQLIAAGVSLVSFSGDKLLGGPQAGIIVGKKAMIAQLQSHPLKRALRADKMTLAALEATLRLYLHPEALAEKLPTLRLLTRSEASIREQAQRLQARLAARYGDEFALEVKPCLSQIGSGSLPVDRLPSAAMTFTPHDGRGSRLEALAARWRTLPVPVIGRIYDGRLWLDMRCLEDESRFMEMMLK", - "output": "cytoplasm ; L-seryl-tRNASec selenium transferase activity ; selenocysteine incorporation" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MGSLSSSDYSKKPHAVCIPYPAQGHINPMLKLAKLLHYKGFHITFVNTEFNHKRLLKSRGSDSLKGLHSFQFKTIPDGLPPSDVDATQDIPSLCESTTTHCLVPFKQLLQKLNDTSSSEVPPVSCVVSDAVMSFTISAAQELDIPEVLFWTPSACGVLGYMHYAQLIDKGLTPLKDASYFSNGFLDQVLDWIPGMEGIRLRDLPTFLRTTNPDEYMIKFILQETERSKKASAIVLNTFQELESEVIDSLSTLLPPIYPIGPLQILQNQVDDESLKVLGSNLWKEEPECLEWLDTKDPNSVVYVNFGSITVMTNDQLIEFAWGLANSKQNFLWIIRPDLISGESSILGEEFVEETKERGLIASWCHQEQVINHPAIGGFLTHNGWNSTIESISSGVPMICWPFFAEQQTNCRFCCNKWGIGMEINSDVKRDEVESLVKELMVGEKGKEMKKKALEWKNIAEVTTTKPDGSSYSNLEKLIKVLKSKPSH", - "output": "UDP-glucosyltransferase activity ; (-)-secologanin biosynthetic process" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "VAVGNNVLDTLGRSRQSFGGKVRQAMNVPKGKGSRGVVKAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGENNEVTANVGGGSGTNKMPTLEEYGTNLTKLAEEGKLDPVVGRHPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGVVRETSEGKKVITLDMGLLAAGTKYRGEFEERVKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVDETIQILKGLRERYEIHHKLRYTDESLVAAAQLSYQYISDRFLPDRAIDLMDEAGSRVRLRHAQVPEEARELEKELRQITKENEAVRGQDFEKAGTLRDREIELRAEVSAIQAKGKEMSKAESETGDEGPMVTESDIQHIVSSWTGILVEKVSTDESDLLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFFGPTGVGKSELAKALAAYYFGCEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEPPQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTNSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYEKDSSYNRIKSLVTQELKQYFRPEFLNRLDEMILFRQLTKLEVKEIADILLQELFERLKKKEVELQVTERFKERVVDEGYNPSYGARPLRRAIMRLLEDSMEEKMLAREIKEGDSVIVDVDSEGKVTVLNGGSGTPTTSLEEQEDSLPVA", - "output": "chloroplast ; ATP binding ; ATP hydrolysis activity" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MSIRVTQKSYKMSTSGPRAFSSRSFTSGPGARISSSSFSRVGSSSSSFRGSMGTGVGLGGFGGAGVGGITAVTVNQSLLSPLKLEVDPNIQAVRTQEKEQIKSLNNKFASFIDKVRFLEQQNKMLETKWSLLQQQKTSRSNMDNMFESYINNLRRQLEALGQEKLKLEAELGNMQGLVEDFKNKYEDEINKRTEMENEFVLIKKDVDEAYMNKVELESRLEGLTDEINFLRQIHEEEIRELQSQISDTSVVLSMDNSRSLDMDGIIAEVRAQYEDIANRSRAEAETMYQIKYEELQTLAGKHGDDLRRTKTEISEMNRNINRLQAEIEALKGQRASLEAAIADAEQRGEMAIKDAQTKLAELEAALQRAKQDMARQLREYQELMNVKLALDIEITTYRKLLEGEESRLESGMQNMSIHTKTTSGYSGGLSSSYGGLTSPGFSYGMSSFQPGFGSAGGSNTFSRTTKAVVVKKIETRDGKLVSESSDVVSK", - "output": "apicolateral plasma membrane ; cell periphery ; cell-cell junction ; costamere ; cytoplasm ; dystrophin-associated glycoprotein complex ; intermediate filament ; intermediate filament cytoskeleton ; keratin filament ; nuclear matrix ; nucleoplasm ; sarcolemma ; Z disc ; protein-containing complex binding ; scaffold protein binding ; cell differentiation involved in embryonic placenta development ; extrinsic apoptotic signaling pathway ; hepatocyte apoptotic process ; response to hydrostatic pressure ; response to other organism ; sarcomere organization ; tumor necrosis factor-mediated signaling pathway" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MDPNQTNVVPPALHLVDPQIQLTITRMEDAMGQGQNSADPKVYPIILRLGSQLSLSMARRNLDSLEARAFQSTPIVVQMTKLATTEELPDEFVVVTAK", - "output": "host cell cytoplasmic vesicle membrane ; host cell endoplasmic reticulum ; host cell mitochondrion ; host cell nucleus ; mitochondrial outer membrane ; outer mitochondrial membrane protein complex ; virion component ; identical protein binding ; negative regulation of defense response to virus ; negative regulation of mitochondrial fission ; positive regulation of autophagosome assembly ; suppression by virus of host type I interferon-mediated signaling pathway ; suppression by virus of host viral-induced cytoplasmic pattern recognition receptor signaling pathway via inhibition of MAVS activity" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "ALWKNMLKGIGKLAGQAALGAVKTLVGA", - "output": "extracellular region ; defense response" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MHNESPIIRRKSTRIYVGDVPIGDGAPIAVQSMTNTRTTDVAATVAQIKALENVGADIVRVSVPTMDAAEAFKLIKQQVSIPLVADIHFDYRIALKVAEYGVDCLRINPGNIGNEERIRSVVDCARDKNIPIRIGVNGGSLEKDLQMKYGEPTPEALVESAMRHVDILDRLNFDQFKVSVKASDVFLAVDSYRLLAKKIDQPLHLGITEAGGARAGAVKSAVGLGMLLAEGIGDTLRISLAANPVEEIKVGFDILKSLRIRSRGINFIACPSCSRQEFDVISTVNALEERLEDIITPMDVSIIGCVVNGPGEAEVSHLGLAGSNKKSAFYEDGKRQKERFDNEDLVNQLEAKIRAKAARMDESNRIDIKVQN", - "output": "4 iron, 4 sulfur cluster binding ; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity ; iron ion binding ; isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway ; terpenoid biosynthetic process" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MPRRRVAAKREILDDPKYGSQILAKFMNHVMESGKKAVAERIVYGALDTVKARKNSDPLEIFEKALDAIAPLVEVKSRRVGGATYQVPVEVRPSRRNALAMRWLVDYARKRGEKSMALRLAGELLDAAEGKGAAVKKREDVHRMAEANKAFSHYRF", - "output": "small ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; tRNA binding ; translation" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MGVGSSLRMQLTAQKPRVDRFVVPRYSLPEIHRRMTWSDRCEKYNGEIWSSKYLQQKRYINFLDEAFGLAPLKAQQRNSDTFDDWCWPCAPRKKSYLSTADNVLDLPSYSITSFPDVLDWSHDDILVAALGKKYHKWSWRTQSPVDQGQTMFDIRCCKFDPKGKRLLLGTDMRVEVHNELSKCQFVQYCKCNIQICTITAIDWSPTGNSFVTGCSRGRICAMNEKDFPIKSLVLIEGAMLVVKISPNARYVAVAGVHKHRVWILSWPDLIRFRFMKTNEIVKDLNWHPWQTALLGVATLSSDRHASMIIWEPHATDKLRQQDVGRGRYSIDAMRFNNKTGELLLSLWSLDVNVPYPKSSELVVMSNFDTVVDHWGESHTGLNRIRTMVFSPDGTKLATATADEDLIIWNFLPNDYKKILARKKFTAFPQFLDICSYGYTIR", - "output": "cytoplasm ; anaphase-promoting complex binding ; ubiquitin-protein transferase activator activity ; positive regulation of ubiquitin protein ligase activity" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MDSNTVSSFQVDCFLWHVRKRFADQELGDAPFLDRLRRDQKSLRGRGSTLGLDIGTATRAGKQIVERILEEESDEALKMTIASVPASRYLTDMTLEEMSRDWFMLMPKQTVAGSLCIRMDQAIMDKNIILKANFSVTFDRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAIGGLIGGLEWNDNTVRVSETLQRFAWRSSNEDGRPPLPPKQKRKMARTIESEV", - "output": "host cell cytoplasm ; host cell nucleus ; protein serine/threonine kinase inhibitor activity ; RNA binding ; suppression by virus of host mRNA processing ; suppression by virus of host PKR signaling ; suppression by virus of host type I interferon-mediated signaling pathway ; suppression by virus of host viral-induced cytoplasmic pattern recognition receptor signaling pathway via inhibition of host RIG-I activity" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MAFTLPELPYAPNALEPFFDEATMRLHHGKHHQTYVNNLNAAIEKHNELDDLSLEELLTDLSAIPEDIRTAVRNNGGGHLNHSQFWLWLRPNTDGSENHADGEIGDAIAKEFGSFETFKTEFKAAATGRFGSGWAWLVVDEAGKLKVVSTANQDNPISEGLTPVLGLDVWEHAYYLKYHNVRPDYIEAFFNLVNWDKVNELYAKAK", - "output": "metal ion binding ; superoxide dismutase activity" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MLQALQKLLGDPNERKIRKYLPVVKLINSLEIEIASLSDAELRAKTTEFRQRLDRGESLDDLLPEAFAVVREAAKRVLNLRHYDVQLIGGMVLHEGQIAEMKTGEGKTLVATLPAYLNGLTGKGVHIVTVNGYLARRDSEWMGQVHRFLGLTVGLVQEGMSTDEKRRSYHCDITYCTNSELGFDYLRDNMATDIKEVMQRPFNYCIIDEVDSILIDEARTPLIISGQMARPSEKYLKAAQVARELIRDEHYEVDEKARNVILTDEGFEAAERLLGVSDLFDPKDPWAHFVFNAVKAKELFIRDVHYIVRNQEVVIVDEFTGRVLPGRRWSDGLHQAVEAKEGVPIQNESQTLATITYQNLFLLYPKLSGMTGTARTEEAEFSKTYNLEVTVIPTNRPIRRKDAPDLVYKTENAKWKAVAEEIAHMHAQGRPVLVGTTSVEKSERLSAMLKEMGIPHNLLNAKPENVEREAEIIAQAGRKGAVTIATNMAGRGTDIILGGNAEYMARLKLRERLMPKLVQLDPDNPLGSASTTSRGGGQGFGPASPKPKKSWTVVSPNFYPCELSARTSQALDEVVAAAVAKYGLNRLPELVVEDLIAVASEKAPVQDPLILQLREVYNSIKAEYEKVTEAEHEEVVRLGGLHVIGTERHESRRIDNQLRGRAGRQGDPGSSRFFLSLEDNLLKIFGGERVAKLMDMFRVDEDMPIEHPLLSSSLENAQRKVEVYYFDLRKQVFEYDEVMNNQRRAIYSERRRILEGENLKPKILDYMRKTVEEIVRAHVNPELPPEEWEIDKLTAKMQEFVPLLKENLKADDLRDLSYQEILDHLIKQAELAYEAKEAFLDTFEPGLMRKAERFFLLQQVDTLWREHLQQMEALREAVGLRGYGQRDPLIEYKNEGYELFLEMMDNIRRNTVYNLFVFTPQLVQVPQVAQAVPAQAVAASPETGGVVEADFAED", - "output": "plasma membrane-derived thylakoid membrane ; ATP binding ; protein-exporting ATPase activity ; intracellular protein transmembrane transport ; protein import ; protein targeting" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MPLTWKDSGLRWYWVVVLVFLADQLSKQWVLANFDLFESVQLLPFFNFTYVRNYGAAFSFLSEAGGWQRWLFTIVAVGFSSLLTVWLRKQSASLLKLNLAYTLVIGGALGNLVDRLMHGFVVDFIDFYWGKSHYPAFNIADSAIFIGAVLIIWDSFFNSQSEQDKTEEVK", - "output": "plasma membrane ; aspartic-type endopeptidase activity ; proteolysis" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MNIHEYQAKAIFADNGILTLKGKVAFSVDEAVSNAKELGGSVWAVKAQIHAGGRGLGGGVKIAKNLDEVKDYASKILGMNLVTHQTGPEGKLVQKLYIESGANIVKEYYLAILFNRMAEQITIIASSEGGMDIEKVAKESPGKIAKVGIDPQIGFKMFHGLEVARVLGLDKDEGKKLISMIAKLYKLYMDKDMNMLEINPLIKTAEGDFYALDAKCSFDDSALYRHPEIAELRDITEENPAEREAAEFGLSYVKLDGDVACMVNGAGLAMATMDIINYSGAKPANFLDVGGGASPETVAKAFEIILRDKNVKVIFINIFGGIVRCDRIANGILEATKNVEVNIPIVVRLDGTNAAEAKTILDNSNLKNIKAATNLKNGAELVKSLVG", - "output": "cytoplasm ; ATP binding ; magnesium ion binding ; succinate-CoA ligase (ADP-forming) activity ; succinate-CoA ligase (GDP-forming) activity ; tricarboxylic acid cycle" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MKLSRRSFMKANAVAAAAAAAGLSVPGVARAVVGQQEAIKWDKAPCRFCGTGCGVLVGTQQGRVVACQGDPDAPVNRGLNCIKGYFLPKIMYGKDRLTQPMLRMKDGSYHKDGEFTPVSWEQAFDVMEEKFKTSLKEKGPEAIGMFGSGQWTIWEGYAAAKLFKAGFRSNNIDPNARHCMASAVVGFMRTFGMDEPMGCYDDIEQADAFVLWGSNMAEMHPILWSRITNRRLSDPNVKVAVLSTFQHRSFELADNGIVFTPQSDLVILNYIANYIIQNNAVNQDFFTKHVNLRKGATDIGYGLRPTHPLEKAAKNPGSDASEPMSFDEYKAFVAEYTLDKTAEMTGVPKDQLEQLAQLYADPNKRVISYWTMGFNQHTRGVWANNLVYNLHLLTGKISQPGCGPFSLTGQPSACGTAREVGTFSHRLPADMVVTNEKHRDICEKHWQIPAGTIPAKVGLHAVAQDRALKDGKLNVYWVMCNNNMQAGPNINEDRMPGWRDPRNFIIVSDPYPTVSALSADLILPTAMWVEKEGAYGNAERRTQFWRQQIKAPGEAKSDLWQLVQFSRRFKTEEVWPEALLAQKPELRGKTLYDVLFATPAVSKFPLSELKEDQLNDESRELGFYLQKGLFEEYAWFGRGHGHDLAPFDDYHNARGLRWPVVEGKETQWRYSEGNDPYVKAGEGYKFYGKPDGKAVIFALPFEPAAESPDNEYDLWLSTGRVLEHWHTGSMTRRVLELHRAFPEAVVFIHPLDAKARDLRRGDKVKVSSRRGEVISIVETRGRNRPPQGLVYMPFFDAAQLVNNLTLDATDPLSKETDFKKCAVKLAKV", - "output": "periplasmic space ; 4 iron, 4 sulfur cluster binding ; electron transfer activity ; iron ion binding ; molybdenum ion binding ; molybdopterin cofactor binding ; nitrate reductase (cytochrome) activity ; nitrate reductase activity ; Mo-molybdopterin cofactor biosynthetic process ; nitrate assimilation" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MTRSLKKNPFVANHLLRKINKLNTKAEKNLIVTWSRASTIIPTMIGHTIAIHNGKEHLPIYITDRMVGHKLGEFAPTLNFRGHAKNDNKSRR", - "output": "chloroplast ; small ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MSLKAIATTLGISVTTVSRALGGFSDVAASTRERVEAEARRRGYRPNTQARRLKTGKTDAIGLVYPENDVPFNSGVFMDMVSCISRELAYHDIDLLLIADDEHADCHSYMRLVESRRIDALIIAHTLDDDPRITHLHKAGIPFLALGRVPQGLPCAWFDFDNHAGTWQATQKLIALGHKSIALLSENTSHSYVIARRQGWLDALHEHGLKDPLLRLVSPTRRAGYLAVMELMSLPAPPTAIITDNDLSGDGAAMALQLRGRLSGKEAVSLVVYDGLPQDSIIELDVAAVIQSTRSLVGRQISDMVYQIINGASPESLQITWTPIFYPGSTVHSPSF", - "output": "DNA binding ; regulation of DNA-templated transcription" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MKMKAYAKINIALDAIGKREDNYHLLRMIMQTVDLYDVIDIEKSNDSNISISCNKHYVSTDERNLAYKAAVLFRDEFNIKDGVKINIKKNIPVAAGMAGGSTNAAAVLVIMNKLFNVNASLEVLKEIGLKIGADVPYCIEGGTALCEGIGEIITPLKPFENKILVVLKPNFGVSTKEVYTNLDINKIRKHVNIEGLIQAMENDDLDYVSKNMKNVLENVTLKKHTILKNIKEDMRKSGALGAMMSGSGPTVFAFFDDMLTAQRAFEFLKGKYKYSDVYITRTINSNNL", - "output": "4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity ; ATP binding ; isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway ; phosphorylation ; terpenoid biosynthetic process" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "ATVPAGTSVYQQPAVQYQQYQPYQTVVQSQPQQVVAGRVVPAVYPATVGSQVYPSGVVPATVYNSGIVRNVYPAGVVPAVAGAYQYFPTD", - "output": "structural constituent of cuticle" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MNILVIKSSVNEKKGSYSSHLSDLFIKFYLEIHPEDQIEVYDLNQFGLANTNLTMKNFEDKTFYQKAESDFWINKLRNADKIVFSTSMTNFNYSATTKNFFDAITVPNKTFLLDKNTGKYTGLLKNIQNVQILTAQGAPLGWYPFGNHSALIKQIFEFLGAKVRSDFFVLDGTKVAPNNQKPIADFVAQRQNQIKILAENF", - "output": "electron transfer activity ; FMN binding ; oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor ; oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MNKKELFDAFDGFSQNLMVTLADIEAMKKQVQGLVEENTILRLENTKLRERLSQLEHENLAKTSSKQGKDHLEGIYDEGFHICNFFYGQRRENDEECMFCRELLDRK", - "output": "DNA replication" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MRTIKEIALESGYSPATVSRLLNNDPNLSITADTKNKILEIANKLGYWEDHQEKKIKPTIALLYRVNHNEQLQDEYFTSLKQALVSTVERDALKMKTFYDIEDLIKNASLFQGFIGVGAEPIENAQLVKLHKVLPNGVFVDTNPAPELFDSIRPNLPFTVKNAIDLFIKNGINKIGFIGGVGPKHDHIQENDLRSITFVEYMKTRGMDTKWTCVEGPVSVENGYKLGKMVLAKYKNDLPEAFLIASDTLAVGVLQAFNEENVNVPKDTKILSINNSNVVKYVSPPLSSFNINQQEMIDMALDTLTHLIIRPDRPNIDIRMNTNLVVRKSFVPQEK", - "output": "DNA binding ; lactose catabolic process ; regulation of DNA-templated transcription" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MISLNSIFLLSLVGLSRAAPSRSETSPDRTIKPRAACTPTAGGSSSTDDVPAIQEAITSCGDGGTIVIPADTTYYLNSVLDFKGCSNCDFQVEGLLQFTSSTDYWNGKTAMISVSDIDGLKLRSVTGSGVIDGNGQESWDKFAEDSSYKRPTLLYITGGSNIEVSGLRQKNPPNVFISVKGDTSNAQFTSLTMDATSNSDNLPKNTDAFDIGASTYVTISSVAITNDDDCVAFKPGANYVTVENVSCTGSHGISVGSLGKSSDDTVQNVYARNITMINSSKAAGIKTYPSGGDHGLSTVKNATFEDFIVDGCDYAFQIQSCYGEDDTYCEENPGDAVLEGIVVKGFTGTTSDKEDPVVANLNCGSKGTCDVTISGFEVKAPSGDAKILCGNTPSDLGVTCSSGASG", - "output": "extracellular region ; polygalacturonase activity ; cell wall organization ; polysaccharide catabolic process" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MAPKRKLSDSDAPEVVHPSRQVQVYGDEPKPAKKRKSEPAFNKKQAHASSVNTIKKKIRDITRKLERAQDLPADVRVEDERALAAYQQELASAEAEKIRQKMIKKYHMVRFFERQKATRQLKKLRKRLLDSESTEEVEQLKDEMHILEVDLNYTQYHPLSETYISLYPPKGSGEDAEVKATKEKPPMWKEVEKCMEEGTLDRLRNRKPEATVSTTKPVRLPERKLVKPKSIPKPKPVEQAPAIDTTGMNRRQRRAQRGVKDSRATKIAKNKSTGFSKNQAFGAVEGARADEAQDGNVSDGGFFEE", - "output": "nucleolus ; rRNA processing" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MVLSNVKIFRLKSHRAFRIGPMIKAVAGNLLVKRFYQPKLERIPPASLLLKQKIRLAQNGSTTSTENPISFSQTMSEIFSVLQPSAPDLDEDKTSGLKRDHLLTERLNNGELGVIMNKFFNPSSTHNNQLIDTNILLQNFPKLSGNDLDLLDFAINEKMRGNWNDLKQDFIQLWYYKSFGFLGPRTQFVLTNSSPSLRSQFLKLPFTEYNWFLLQNNKNANILPADVQNVVKVFHLDDKRFTWKSIDPFSKAIISFVVFVSIYVWLDESAKQKTKELPAQKSTVISE", - "output": "mitochondrial membrane" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MWQFRIFLLFASTWGISGVSAHPDPVFSSSEGAHQVLRVRRANSFLEEVRAGSLERECMEEICDFEEAQEIFQNVEDTLAFWIKYFDGDQCSTPPLDHQCDSPCCGHGTCIDGLGGFSCSCDKGWEGRFCQQEMGFQDCRVKNGGCYHYCLEETRGRRCRCAPGYELADDHMHCRPTVNFPCGKLWKRTDKKRKNFKRDIDPEDEELELGPRIVNGTLTKQGDSPWQAILLDSKKKLACGGVLIHTSWVLTAAHCLESSKKLTVRLGEYDLRRRDPWELDLDIKEVLVHPNYTRSNSDNDIALLRLSQPATLSKTIVPICLPNSGLAQELSQAGQETVVTGWGYQSDKVKDGRRNRTFILTFIRIPLAARNDCMQVMNNVVSENMLCAGIIGDTRDACDGDSGGPMVVFFRGTWFLVGLVSWGEGCGHLNNYGVYTKVGSYLKWIHSYIGERDVSLKSPKL", - "output": "endoplasmic reticulum ; extracellular space ; Golgi apparatus ; serine-type endopeptidase complex ; calcium ion binding ; oligopeptidase activity ; peptidase activity ; protein self-association ; serine-type endopeptidase activity ; blood coagulation ; liver development ; negative regulation of apoptotic process ; negative regulation of blood coagulation ; negative regulation of coagulation ; negative regulation of inflammatory response ; positive regulation of establishment of endothelial barrier ; protein catabolic process ; proteolysis ; regulation of circulating fibrinogen levels" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MKISANSIRTGNILVYNNDLWVVSKQPEHTQPGKGGAYVQVEMKNLKTGTKRNERFSSSDHLEKAELEQKDYQFLYFEDNNIVLMDNQTFEQISVNKEILDEKLPFLTENMIVKVEFYNEKPLSIELPATVILEIIETDPVIKGATATASYKPATLANGVKVKVPQYLEIGEKIVVKTEDLTYVERSK", - "output": "cytoplasm ; translation elongation factor activity" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MNIALIAHDEKKEDMIQFTTAYTHVLSKHRLFATGTTGMKISNATGLQIHRFQSGPLGGDQQIGAMIANGEMDMIIFFRDPLTAQPHEPDVSALMRLCDVHQIPLVTNIAGAEIFIHGLSRGDLKWREIIKERQEKEGTP", - "output": "methylglyoxal synthase activity ; methylglyoxal biosynthetic process" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MGEQLKKQPVLRGGGFTFKQFFVAHDRCAMKVGTDGVLLGAWVPVLHARRVLDIGCGSGLIALMIAQRSLPQVQIDGVELEPAAAQQASSNVELSPWAERIHIHQQDIHQFAENHPHQYDLIVSNPPYFAPAIACRDEARDTARYTGSLTHDALLNCAEKLITEDGMFCVVLPHELGIEFARLAGQQGWFVRCQVDIRDRPGKPLHRMLLTLSRQAGETVYQHLALRQSEGVYSPEFCQLISDFYLNY", - "output": "cytoplasm ; nucleic acid binding ; tRNA (adenine-N6-)-methyltransferase activity" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MPKKNEAPASFEKALSELEQIVTRLESGDLPLEEALNEFERGVQLARQGQAKLQQAEQRVQILLSDNEDASLTPFTPDNE", - "output": "cytoplasm ; exodeoxyribonuclease VII complex ; exodeoxyribonuclease VII activity ; DNA catabolic process" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MDTAGIRLTPKEIVSKLNEYIVGQNDAKRKVAIALRNRYRRSLLDEESKQEISPKNILMIGPTGVGKTEIARRMAKVVGAPFIKVEATKFTEVGYVGRDVESMVRDLVDVSVRLVKAQKKSLVQDEATAKANEKLVKLLVPSMKKKASQTNNPLESLFGGAIPNFGQNNEDEEEPPTEEIKTKRSEIKRQLEEGKLEKEKVRIKVEQDPGALGMLGTNQNQQMQEMMNQLMPKKKVEREVAVETARKILADSYADELIDQESANQEALELAEQMGIIFIDEIDKVATNNHNSGQDVSRQGVQRDILPILEGSVIQTKYGTVNTEHMLFIGAGAFHVSKPSDLIPELQGRFPIRVELDSLSVEDFVRILTEPKLSLIKQYEALLQTEEVTVNFTDEAITRLAEIAYQVNQDTDNIGARRLHTILEKMLEDLSFEAPSMPNAVVDITPQYVDDKLKSISTNKDLSAFIL", - "output": "HslUV protease complex ; ATP binding ; ATP hydrolysis activity ; peptidase activity ; proteasome-activating activity ; protein unfolding" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPRLSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLESTFAVK", - "output": "DNA repair complex ; 3'-5'-DNA exonuclease activity ; ATP binding ; ATP hydrolysis activity ; DNA exonuclease activity ; double-stranded DNA endonuclease activity ; single-stranded DNA endodeoxyribonuclease activity ; DNA recombination ; DNA repair ; DNA replication ; double-strand break repair" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MTTTLTTDLNADAGESFGHWPLGDDARLFPLLTSVNLALGFHAGDPVTLHSAVRLARQHGLGIGAHPGYPDLVGFGRRELALTPLEIQAATLYQIGALQAFLTVEGGTLQHVKAHGALYMRIHEDRAAGEAFCHAVQQLVPQAYLIVLAGAAGSDLALTAAAHGLRVRREAFPERAYTGDGRLASRQLPGSSIHDPAEAARRAVGMAQGWVQTLGGERLALEMDTLCIHGDNPQAVAIAGAIRAALAENGVTLARLHD", - "output": "5-oxoprolinase (ATP-hydrolyzing) activity ; ATP binding ; carbohydrate metabolic process ; nitrogen compound metabolic process" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MSEPRQILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKLRGNQCIYVCADDAHGSAIMLRAEKEGITPEQLIANVQAEHSSDFADFLVDFDNFHSTHSDENRELSSLIYSRLREAGHIATRSVTQYFDPEKGMFLADRFIKGTCPKCAAEDQYGDNCEKCGATYAPTELKNPKSAISGATPVLRDSQHFFFKLPDFQAMLQQWTRSGTLQDAVANKLAEWLDSGLQEWDISRDAPYFGFEIPGEPGKYFYVWLDAPIGYMASFKNLCARRPELDFDAFWHEGSKAELYHFIGKDIVNFHALFWPAMLEGAGFRKPTAVNVHGYLTVNGAKMSKSRGTFIKARTYLDHLQPEYLRYYYAAKLGRGVDDLDLNLEDFVQKVNSDLVGKVVNIASRCAGFIHKGNEGVMVGGDAAPELTEAFLAAAPSIAEAYEARDFGRAMREIMALADRANAWIADKAPWSLAKQEGKQDEVQAICAQGINLFRQLVIFLKPVLPVLAADAEAFLNVAPLTWNDHLTRLENHQLNPFKALMSRIEPAKVEAMVAASKEDLLAAEAKAPAGNGELAKDPLSAEIEFDTFAAVDLRVALIVKAEAVAGADKLLQLTLDIGDERRNVFSGIKSAYPDPSKLEGRLTMMVANLKPRKMRFGVSEGMVMAAGPGGEEIYLLSPDSGAKPGQRIK", - "output": "cytoplasm ; ATP binding ; metal ion binding ; methionine-tRNA ligase activity ; tRNA binding ; methionyl-tRNA aminoacylation" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MKNIRNFSIIAHIDHGKSTLSDRLIQTCGGLSDREMEAQVLDSMDLERERGITIKAQSVTLNYKAKNGETYQLNFIDTPGHVDFSYEVSRSLAACEGALLVVDAGQGVEAQTLANCYTAIEMNLEVVPILNKIDLPAADPERVAEEIEDIVGIDAMEAVRCSAKTGVGIEDVLEEIVAKIPAPKGDPNAPLQALIIDSWFDNYLGVVSLVRVKNGVLRKGDKIKVMSTGQTYNVDRLGIFTPKQVDKNELECGEVGWVVCAIKDILGAPVGDTLTSQHNPASSVLPGFKKVKPQVYAGLFPVSSDDYEAFRDALGKLSLNDASLFYEPETSTALGFGFRCGFLGLLHMEIIQERLEREYDLDLITTAPTVVYEVELTNGDVIYVDSPSKLPPLNNISEIREPIAECNMLVPQEYLGNVITLCVEKRGVQTNMVYHGNQIALTYEIPMGEVVLDFFDRLKSTSRGYASLDYSFKRFQAADMVRVDIMINGERVDALALIVHKDNAPYRGRELVEKMKELIPRQQFDIAIQAAIGNHIIARSTVKQLRKNVLAKCYGGDVSRKKKLLQKQKEGKKRMKQLGNVEVPQEAFLAILHVGKDSK", - "output": "plasma membrane ; GTP binding ; GTPase activity ; guanosine tetraphosphate binding ; ribosome binding ; translation elongation factor activity ; positive regulation of translation" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MQAINPIWAEVQKSLQKTLSKPSFETWIRPAKFNCFENGLLTLIAPNTFSSDWLRKNYCETIEKTAKEICGYDVKVIFKSETNINSYLTNKENLDEKKVDHKTKSFSNNSQDISSKNRSKKPNGLNLRYVFKRFVVGPNSRLAHAAALAVAESPGREFNPLFICGGVGLGKTHLMQAIGHYRVEIDPEAKVKYVSTETFTNDVISGIRRDGMTAIRDKYRNVDLILIDDIQFLEGKEYTQEEFFHTFNALHESGSQIVIASDRPPNQLSGIQERLISRFSMGMTADIQPPDLETRTAILQKKAEQERMNLPRDLIQFIAGRFTSNIRELEGAFTRAVAFASITGLPMTVQSIAPMLDPNSVGVVVTPKQVINKVSDFFKVSTDELISSSRRKPVSQARQIGMYLMRQGTDLSLPRIGDEFGGKDHTTVMYAIEQVEKKLSIDPNIASQVQKIRDLLQIDSRKNL", - "output": "cytoplasm ; ATP binding ; DNA replication origin binding ; DNA replication initiation ; regulation of DNA replication" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MQLPISQYNELLQKKLEKLTALLRPFNAPDIQVFDSPTSHYRMRAEFRIWHEQDDFYHIMFDQATLQRYRVDEFPIASTQINRMMQTLLPLLKQQEVLHKKLFQIDYLSTLSNKIIVSLLYHKTLTEEWESAAKNLKDLLEKQGFNVQIIGRASKQKICFEQDYVDEVLPVNGRNYVYRQVENSFTQPNATVNCKMLEWAIDCTQNSEGDLLELYCGNGNFSIALAQNFRKVLATEIAKPSVAAAQFNIAENKVDNLQIIRMSAEEFTQAMNGVRAFNRLKGIDLKSYECNTIFVDPPRAGLDPDTVKLVQNYDRILYISCNPHTLCDNLVELSKTHRIEKAALFDQFPYTDHMESGVWLIRK", - "output": "S-adenosylmethionine-dependent tRNA (m5U54) methyltransferase activity" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MAKVQAYVSDEIVYKINKIVERRRAEGAKSTDVSFSSISTMLLELGLRVYEAQMERKESAFNQAEFNKVLLECAVKTQSTVAKILGIESLSPHVSGNPKFEYANMVEDIRDKVSSEMERFFPENDEE", - "output": "cytoplasm ; DNA binding" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MQVILLDKVANLGSLGDQVNVKAGYARNFLVPKGKAVPATKKNVEYFEARRAELEAKLADVLAAANARAEKINALETVTIASKAGDEGKLFGSIGTRDIADAVTAAGVDVAKSEVRLPNGVLRTTGEHEVNFQVHSEVFAKVIINVVAE", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MAESVERLLQRVEELEQELARERSRRIAGDGHCGRTRIQKMSDEVVDSNPYSRLMALKRMGVVSDYEKIRTYAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPYQAGMSKVQAAEHTLRSINPDVLFEVHNYNITTVEHFEHFMNRISNGGLEEGQPVDLVLSCVDNFEARMAINTACNELGQTWMESGVSENAVSGHIQLMVPGESACFACAPPLVVASNIDEKTLKREGVCAASLPTTMGVVAGILVQNVLKFLLKFGTVSFYLGYNAMQDFFPTMFMKPNPQCDDKNCRKQQEEYKKRAPAQPTQETAPQEEEEVVHEDNEWGIELVSEVSEEELKNSSGPVPTLPEGITVAYTVPKKREDSVSEVTVEDSGESLEDLMARMKKM", - "output": "cytoplasm ; cytosol ; endoplasmic reticulum membrane ; Golgi apparatus ; nucleus ; ATP binding ; protein homodimerization activity ; UFM1 activating enzyme activity ; zinc ion binding ; erythrocyte differentiation ; localization ; megakaryocyte differentiation ; neuromuscular process ; protein K69-linked ufmylation ; protein ufmylation ; regulation of intracellular estrogen receptor signaling pathway ; response to endoplasmic reticulum stress ; reticulophagy ; selective autophagy" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MSALQALSTSRLDGKVALVTGSGRGIGAAIATELANRGASVVVNYANSPDAAQTVVDAIKKNGGDAIALQADVSDVKQTIKLFDDAVAHYGQLDIAVSNSGVVSFGHLKDVTEEEFDRVFAINTRGQFFVAREAYKHLSVGGRIILMGSITGQAKGVPKHTVYSGTKGAIETFVRCMAIDCGDKRITVNCVAPGGIKTDMYHAVCKEYIPNGENLTNEQVDEYAATWSPLNRVGQPIDVARVCGFLASQDGEWINGKVLGIDGAACM", - "output": "oxidoreductase activity ; cellular biosynthetic process ; organic substance biosynthetic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MTTQLRVVHLLPLLLACFVQTSPKQEKMKMDCHKDEKGTIYDYEAIALNKNEYVSFKQYVGKHILFVNVATYCGLTAQYPELNALQEELKPYGLVVLGFPCNQFGKQEPGDNKEILPGLKYVRPGGGFVPSFQLFEKGDVNGEKEQKVFSFLKHSCPHPSEILGTFKSISWDPVKVHDIRWNFEKFLVGPDGIPVMRWSHRATVSSVKTDILAYLKQFKTK", - "output": "extracellular region ; glutathione peroxidase activity ; cellular response to oxidative stress ; lipid metabolic process" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MLLPRDLLLLPWRRATAAGEAIARRLNHHRAPPFSDPDDDPPFTRLAERPPRAPSKKKKKEEEDQGGRIRPPEPASSDLPFDFRYSYSETDPAWRPIGFREPTRFSPFGPGRLDRPWDGVAAAAARGEGAGAAATSREEVLGEPLAEEEVAQLVERYRHSDCSRQINLGKGGVTHNMIDDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKTGGKVIYRNINILILYRGRNYDPKQRPQIPLMLWKPLAPIYPRLVQNVADGLTFEKTKELRNTGLNSSPLMKLTRNGVYVNVVDRVREAFKTVEVVRLDCSHVGSSDCKKIGVKLRDLVPCVPLLFKDEQIILWRGKVKQENSVSLQFSPEPS", - "output": "mitochondrion ; ribonucleoprotein complex ; RNA binding ; Group II intron splicing ; mRNA processing" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MVPYEYYVVLSGLLMVLGLIGIIIRKNLIAMLLSTELMLNAVNIAFVAFDMKLYDVSGQVFVFFILTIAAAEAAVGLGLIMAIYRLRKDVDVNTLTELKL", - "output": "plasma membrane ; NADH dehydrogenase (quinone) activity ; quinone binding ; ATP synthesis coupled electron transport" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MNWITNYVRPKINSMLGRRTDMPENLWIKDPETGEMVFHKDLESNQFVIPSSGHHMKISAKERLKYFLDDGRYEQLENPKVVLDPLKFRDEKRYTDRLKDAKAKTGLEDAIVNALGTIEGLPVVVTVQDFAFMGGSLGMAAGDAIVHAFEVALQRKRPLILFAASGGARMQEGILSLMQLPRTTVGVDRLKEAGLPYIVVLTNPTTGGVTASYAMLGDVHIAEPGALIGFAGPRVIEQTIREKLPDGFQRSEYLMEHGMVDMVVSRLEMRQTIARLLKMLLKMPGEQKPLEPEILPPAVVAAEARPQA", - "output": "acetyl-CoA carboxylase complex ; acetyl-CoA carboxylase activity ; ATP binding ; carboxyl- or carbamoyltransferase activity ; fatty acid biosynthetic process ; malonyl-CoA biosynthetic process" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MAIMSDKWIKEAVINHSMIRPFAEKQVRVHNKEKIISYGLSSYGYDARVSNEFKIFTNINSTTVDPKNFSEYNLVDREVDVCIIPPNSFALGRTIEYFKIPRDVLVICVGKSTYARCGIIVNVTPLEPEWEGHVTLEFSNTTPLPAKIYANEGACQFLFLKSDQICDTSYADRQGKYMKQVGVTLPLT", - "output": "dCTP deaminase activity ; nucleotide binding ; dUMP biosynthetic process ; dUTP biosynthetic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MRIVFMGTPSFAEVILRALVENEDKKIEVVGLFTQRDKPFGRKKELKAPETKTYILENHLNIPIFQPQSLKEPEVQILKGLKPDFIVVVAYGKILPKEVLTIAPCINLHASLLPKYRGASPIHEMILNDDRIYGISTMLMDLELDSGDILESASFLREDYLDLDALSLKLARMGATLLLSTLKNFHSITRKPQDHMQASFCKKIAKADGLVGFKDAKNLFLKSLAFKSWPEIFLENSLKLLEVELVENEKSHKEGEILAIDERGVLVGCLKGSVRIARLQAVGKKPLKAKDYLNGRRLKVGGILT", - "output": "methionyl-tRNA formyltransferase activity" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MSWISPELIEILLTILKAVVILLVVVTCGAFMSFGERRLLGLFQNRYGPNRVGWGGSLQLVADMIKMFFKEDWIPKFSDRVIFTLAPMIAFTSLLLAFAIVPVSPGWVVADLNIGILFFLMMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTLSYEVFLGLSLMGVVAQAGSFNMTDIVNSQAHVWNVIPQFFGFITFAIAGVAVCHRHPFDQPEAEQELADGYHIEYSGMKFGLFFVGEYIGIVTISALMVTLFFGGWQGPLLPPFIWFALKTAFFMMMFILIRASLPRPRYDQVMSFGWKICLPLTLINLLVTAAVILWQAQ", - "output": "plasma membrane ; oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor ; quinone binding" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MEDDAPVIYGLEFQARALTAQTAETDAIRFLVGTQSLKFDNQIHIIDFDDENNMINKSVLLHDAGEIWHISGSPADKAVLTTCYNKTSESRVLTCAAVWRMPPEWESGNHESPDDSSNNPQTLELLCHLDNSAHGSMACVLWEPMGDGKRVISLAENHVLLWDLQESSAKATISSSATLEGKGQLKFTAGKWSPHHNCTQLATANDTAIRGWDLRSMSQIYCIENAHGQLVRDLDFNPNKQYYLASCGDDCKVKFWDVRHISEPVKCLEEHSHWVWSVRYNHSHDQLLLTASSDSRVILSNMVSISSEPFGHLVDDDDLSDPEENQQEDKGKEPLQDSIISTYEEHEDSVYAVEWSAADPWLFASLSYDGRLVINRVPRALKYRILL", - "output": "Golgi apparatus ; endocytic recycling ; protein ubiquitination" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MIRVILTDIEGTTSSISFVHDVLFPYASEHLPEFIRANHHTLPAVAEQLVRVAEISGTDRKDIDGLINVLQEWIAEDRKEGALKALQGMVWEQGYHSGELKGHIYPDAADYLKRWHDRGLRLFVYSSGSVKAQKLIFGHSNEGDFTVFFSGYFDTAVGGKKESQSYRNILAELGVDAGTVLFLSDVEEELRAAEEAGLKTAWLVREGELPDTARVVARDFSEVDALLRKR", - "output": "2,3-diketo-5-methylthiopentyl-1-phosphate enolase activity ; 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase activity ; acireductone synthase activity ; magnesium ion binding ; L-methionine salvage from methylthioadenosine ; L-methionine salvage from S-adenosylmethionine" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MKTISVVTLLCVLPAVVYSTCTVPTMNNAKLTSTETSFNDKQKVTFTCDQGYHSSDPNAVCETDKWKYENPCKKMCTVSDYISELYNKPLYEVNSTMTLSCNGETKYFRCEEKNGNTSWNDTVTCPNAECQPLQLEHGSCQPVKEKYSFGEYMTINCDVGYEVIGASYISCTANSWNVIPSCQQKCDMPSLSNGLISGSTFSIGGVIHLSCKSGFILTGSPSSTCIDGKWNPVLPICVRTNEEFDPVDDGPDDETDLSKLSKDVVQYEQEIESLEATYHIIMVALTIMGVIFLISVIVLVCSCDKNNDQYKFHKLLP", - "output": "host cell Golgi apparatus ; membrane ; virion membrane ; complement binding ; negative regulation of complement activation" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MKYNIVFLFAIIASLACLQLTFAAPAASPLANPGASPDAAPNADPLADPFLPIIGKLLSGLLGKK", - "output": "extracellular region ; chemotaxis ; defense response to bacterium ; defense response to fungus ; killing of cells of another organism" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MASEAPHASAPDCAPASSDIPQQDGGSTNGHGHDLKGHGFFALALGSVGVVFGDIGTSPLYAFKEALAAASHDGVTRSEIFGVVSLALWALILIVTIKYVVFIMRADNKGEGGVLSLMALAQHAMGKRTTLVFVLGVAGAALFYGDAVITPAMSVLSAVEGLRTIPALEHGVTNEVVLLIATVMLLGLFFIQSRGTASVGKLFGPVCAVWFGVMFSLGLMNLAANPGILMAISPYYAVEFLAEHGLTGFIVLGAVFLTVTGVEALTADMGHFGRWPIQAAWLFFVLPCLAMNYLGQGAFALTTLETAQAAGKAMPELNWFFEMAPEALRLPLVLLAGAATVIASQAVITGAFSLTQQAIQLGLLPRLDVRRTSETQSGQIFVPQLNTMLLLGVLAIMFTFQTSSALAHAYGLAVTGTMIVTTCMAFIVMRKLWKWSMPMALLFLVPFLALDITFLSANALRFFSGGWLPVLIGAALFTIMATWVRGSQILTDKTRRDSLPVADLMDILRARAPHRAPGTAIFLTSDPDMTPVALMHNLKHNKVLHERNVILTVRTAETPRVSEEERVKIEKVNDDFKKVVVNYGFMESPNIPKALAVCRKQGLKFDIMATSFFLGRRSIVPSANSGMPLWQDRLFIYLMRNAANPTDFFKIPPGRVVELGAQVTV", - "output": "plasma membrane ; potassium ion transmembrane transporter activity ; symporter activity" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MSRLQTRFAQLKQENRAALVTFVTAGDPDYASSLEILKGLPAAGADVIELGMPFTDPMADGPAIQLANIRALDGGQTLARTLQMVREFRSGDSETPLVLMGYFNPIHHYGVERFIAEAKEVGVDGLIVVDLPPEHNEDLCHPAQAAGIDFIRLTTPTTGDQRLPTVLEGSSGFVYYVSVAGVTGANAATLEHVEEAVARLRRHTDLPIGIGFGIRSAEHAAAVARLADGVVVGSALIDRIAKARDNAQAVKDVLALCGELAEGVRNAR", - "output": "cytosol ; tryptophan synthase activity ; tryptophan biosynthetic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MPVITLPNGSKREFSNPITVLDVAADIGPGLAKATLAGIVDGKEVDAGFTIEQDAALSIVTEKSPEGLEVIRHSTAHLLAQAVKSLFPEAQVTIGPVIDDGFYYDFAYSRAFTPEDLAAIEKKMTELSEQDIPVSRRVLPRDEAVAFFRGIGEDYKAEIIESIPANEDLSLYKQGDFEDLCRGPHVPSTGKLKYFKLMKVAGAYWRGDAKNEMLQRIYGTAWANKKDLKAYLHRLEEAEKRDHRKLGKKFDLFHLQEEAPGMVFWHPKGWSVYTAIEQYMRKVQRENGYKEIKTPQVVDRSLWERSGHWDKFRDGMFTVESESRDYAVKPMNCPCHIQVFNQGLKSYRDLPLRFAEFGSCHRNEASGTLQGIMRVRAFTQDDGHIFCAEDAIQSEVSIFTDLLYEVYRDFGFEDVIIRLSTRPEQRVGSEEVWDKSEKALADALNAKGLAFEYLPGEGAFYGPKIEFSLKDCIGRVWQCGTIQVDFSMPARLDAQFVAEDGSRQVPVMLHRAILGSFERFIGILIENYEGAFPPWLAPEQVVVMNITDNQAEYAEKVRNSLQNEGFRVVSDLRNEKIGFKIREHTIQKVPYLLVVGDQEMENNSVAVRTREGKDLGTYSVDDFATLLADSVAKRGRA", - "output": "cytoplasm ; ATP binding ; metal ion binding ; threonine-tRNA ligase activity ; tRNA binding ; threonyl-tRNA aminoacylation" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MVHFSDSLSRLLAELQKLPGVGEKTALRLAFHLLKSPDNAAALADSLRDVMSRVRFCSVCFGITEDDPCRFCSDARDDGAICVVEEPQDLLAVERTRAFRGRYHVLQGALSPLNGVTPDRLRVAELMKRLEGGGVREVVIATNFTVEGEATALYLARMIKPLGVRVTRLAHGIPLGSDLEFVDAATVQRALEGRSEL", - "output": "DNA binding ; metal ion binding ; DNA recombination ; DNA repair" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MNIKIVCVGKLKEKYFKDGIAEYVKRMGRFAKVKIIQVPDEKAPEKLSPAEMEQVKEIEGKRILDKIKDKEYVYVTAIKGKERTSEDFAKELADLTTYGHSDITFVIGGSLGTSNAVNKRADDLISFGKFTMPHQLMRLVLVEQIYRAFMINSGSPYHK", - "output": "cytoplasm ; rRNA (pseudouridine-N3-)-methyltransferase activity" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MSASVAAPPPALSRKAEFKAAKAELLARFQTATNVTPLMHALSRATDDALRRLWHECGLPATLALVAVGGFGRGELSPHSDVDILVLLPDAHARELDERIERFIGMAWDLGLEIGSSVRTVDQCIEEASQDVTVQTSLLEARRIVGSTALFERFMLRYREALDARAFFQAKVLEMRQRHAKFQDTPYSLEPNVKESPGGLRDLQTILWIARAAGFGSSWRELDTRGLITDREARELRRNEGFLKTLRARLHVIAGRRQDILVFDLQTQAAESFGYRPTPAKRASEQLMRRYYWAAKAVTQLATILIQNIEAQLFPATSGVTRVLSPGRFVEKQGMLEIAADDVFERHPDAILEAFLLYEATRGVKGLSARTLRALYNSRDVMNNAWRRDPRNRHTFMQILQQPEGITHAFRLMNQTSVLGRYLLNFRRIVGQMQHDLYHVYTVDQHILMVLRNIRRFAVAEHAHEYPFCSQLIVNFERPWVLYVAALFHDIAKGRGGDHSALGMTDARRFCREHGIEGGDAALVVWLVQHHLTMSQVAQKQDTSDPEVIKRFADLVGNERRLTALYLLTVADIRGTSPKVWNTWKGKLLEDLYRATLAVLGGAQPDAHSELKTRQEEALALLRLETVPPDAHRALWDQLDVGYFLRHDAADIAWQTRVLYRHVAADTAIVRARPSPVGDALQVLVYVKDRSDLFAGICAYFDRNGLSVLDARVNTTRHGYALDNFIVTQTERDVQYRDIANLVEQQLAARLAESAPLPEPSKGRLSRLSRTFPITPRVDLRADERGQYYILSVSANDRPGLLYSIARVLAEHRVGVHAARINTLGERVEDVFMLDGTGLSDNRLQIQVETELLRAIAV", - "output": "uridylyltransferase activity ; phosphoric diester hydrolase activity ; nitrogen compound metabolic process ; regulation of nitrogen utilization" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MQVIKKVEELMGDAKWLVFQEEYNNKLNGKYETLFTLTNGYMGIRGTFEEGSEGERPGSFIAGIFNRGEAQVRELVNVQNWMRLKIYIEGEEIRLDRCELLEFQRILDMKKGVLFRKTVVKDDKGRVTKIEGYRFVSRSNRHRSAIRFFITPLNYEGVIGVENLIEGTVLNSATHPKYRVKHLKVVKNESICKSGIYLETATTDENKRIAVGSTLRIYNLEDINRENIAFFRRFIPLGENSAEYLEFKGEREKTVVVDKFAVTYTSRDVEKDLLKNAVENDLFDFVSRGFDEELEKHIAEYDKLWSVADITIEGDEEADIALRFNIFHLMSSVNEKDPWVSIGAKGLHGEGYKGHVFWDTEIFMLPFFIYVYPEAARTLLMYRYNMLDAARRNAALNGYKGAQYPWESADTGMEETPKWGFDYKGNPVRIWTGDLEHHITADVAFAVWEYFRATNDIDFMLNFGAEIILETARFWASRCEYVEELDRYEINNVIGPDEFHEHVNNNAYTNYFAKWNIKKGLEIIGELKENYPDYYYAITHKISLTPEEVEKWKEVEKKIYIPYDKDKKLIEQFEGYFEKKDYVIEKFDENNMPVWPEGVDVTKLGDTQLIKQADVVMLMLLMPEEFDEETKRINYEYYEKRTMHKSSLSPSMYAIMGLKVGDHRNAYQSFIRSAKVDLADNQGNAVEGIHAASCGGTWQVAVFGFGGLEIDREGVLNINPWLPEKWEKLSYKIFWKGSLLEVTVAKEEVSVKKLKGRETVKIKVKGKEMAL", - "output": "carbohydrate binding ; kojibiose phosphorylase activity ; carbohydrate metabolic process" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MEHYISLFVKSVFIENMALSFFLGMCTFLAVSKKVSTSFGLGIAVIVVLGIAVPVNQLVYTHILKENALVDGVDLSFLNFITFIGVIAALVQILEMFLDKFVPSLYSALGIFLPLITVNCAIFGGVSFMVQREYNFTESVVYGIGAGTGWMLAIVALAGLTEKMKYADVPAGLRGLGITFITVGLMALGFMSFSGIQL", - "output": "Gram-negative-bacterium-type cell wall ; plasma membrane ; oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor ; respiratory electron transport chain ; sodium ion transport" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MKHRPVHERQCSTETKNWKENTQLIMQSSSGHTHHQPGSNDSPSVCMSLPVPQLSAEGSCTAGDVTIDLSSPESHHGARSSSRRVRPGNGRSLSRHGHTHSHDANGPEDANDADSREQSNSISEVFHFYKWLEKSFPYILIFSAKLVVQHITGISVGIGLLTTFLYANKCIVNQVFLRDKCSKLQCLWILVFLLFSSLLLYYTFSSQALYYSLVFMNPSLGPLHFFDALWVVGITDFIGKFFFMGLKCIILLVPSFVMSHKSKGYWYMALEEVAQCYCMLVSTPVWFRYLIDYGNQNSGAEWHFGILLALLYLILKLLIIFGQRKTSSNSLRLFLTQPNYGAAATKSQCSEVDGMCAICQAEFIKPIVLVCQHVFCEECISLWFNKEKTCPLCRTVISNQSHKWKDGATSLQLRIF", - "output": "endoplasmic reticulum membrane ; metal ion binding ; ubiquitin protein ligase activity ; positive regulation of ERAD pathway ; protein ubiquitination" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MAQETLVDTSIQGKIVQCIGAVVDVEFARNQMPKIYDALKMEGSSLTLEVQQQLGDGIVRTIALGTSDGLRRGNIVYNTGANITVPVGKATLGRIMDVLGAPIDERGPVDQTLTAPIHRKAPAYDELSPSQELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEMADSGVVNLDKLEDSKVAMVYGQMNEPPGNRLRVALTGLTIAESFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERITSTKVGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLSPAVVGEDHYNTARAVQGTLQRYKELRDIIAILGMDELAPEDKLAVARARKIQRFLSQPFHVAEVFTGSPGKYVSLAETIRGFKMIVAGECDHLPEQAFYMVGTIDEAFEKAKKM", - "output": "plasma membrane ; proton-transporting ATP synthase complex, catalytic core F(1) ; ATP binding ; proton-transporting ATP synthase activity, rotational mechanism ; proton-transporting ATPase activity, rotational mechanism" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "VRDGYIADDKDCAYFCGRNAYCDEECKKGAESGKCWYAGQYGNACWCYKLPDWVPIKQKVSGKCN", - "output": "extracellular region ; sodium channel inhibitor activity ; toxin activity ; defense response" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MRVRKRKGAEEHLANNPHYVILNPEDAKGRWHDVFGNDRPIHIEVGSGKGGFITGMALKNPDINYIGIDIQLSVLSYALDKVLASEVPNVKLLRVDGSSLTNYFEDGEVDMMYLNFSDPWPKTKHEKRRLTYKDFLDTYKRILPEHGEIHFKTDNRGLFEYSLASFSQYGMTLRQIWLDLHASNYEGNVMTEYEEKFSNKGQVIYRVEANF", - "output": "tRNA (guanine-N7-)-methyltransferase activity" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MSCLPALDKFLQNYHQSYLSTLGELPRYYPQGEPSLCIQGEFDESSDEAVSWLPVKREQLGSFANVEHALELTLWPDINHFYGEYFAAPVLFDSPWGTGELLQVWNEADFDALQQNIIGHLMMKQKLKQPATWFIGLLDEGDKMLTVDNADGSVWVEIPGELPSTQLAPSLAEFIEALSPRIAPPVKHEELPMPALEHPGIFASFKRMWHNLIGKR", - "output": "cytoplasmic side of plasma membrane" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MKDPIETYMNLVPMVVEQTSRGERAYDIFSRLLKERIIFLNGPVHDGMSSLIVAQLLHLEAENPAKEISMYINSPGGVVTSGLSIYDTMQYIKPKVSTLVIGQAASMGSLLLTAGEAGMRFSLPNSRVMVHQPSGGYQGQATDIMIHAAETQKLKDRLNEIYVKHTGQTMKKVVDALERDNFMSPEEAKEFGLIDEIVENRSKDDAET", - "output": "cytoplasm ; ATP-dependent peptidase activity ; serine-type endopeptidase activity ; proteolysis" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MIVAVPNSGASRINQSGVEALREFPNFPIGGILFKDIAPMLAGRGALGEVVSTVASQVSGTEIDAILAVDARGFILGASLADRLGCGFIMVRKPGKLPGDVLSFEYSCEYCSGTLEVTAGLIGDGLRCLIADDLLATGGTARATGNFVKSQGGEIAGYAFILEIEVLKGRRQLDDAPVISAMTC", - "output": "cytoplasm ; adenine phosphoribosyltransferase activity ; adenine salvage ; AMP salvage ; purine ribonucleoside salvage" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MKKADNEHLARMRVEYGSVEKDGSADLDVDWLADGWVALLRRWLADAEAAGIAEPNAIVLGTVDAGGRPVTRTVLCKSVDDTGITFFTNYGSAKGEDLASTPYASATFPWFALGRQVHVRGPVTKVSAEETADYWSKRPRGSQLGAWASQQSRPIASRAELLDQLAEVTERFADHDTVPVPPDWGGYRITAEVVEFWQGRESRVHNRIRVHDGRIERLQP", - "output": "FMN binding ; pyridoxamine-phosphate oxidase activity ; pyridoxine biosynthetic process" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MLSAASQVLLRSEELLEQGKWLLVNPTDGHVFSALSNPEVYGFHQFFDIYEQSIASAKAQGRDTQHQFVAAYDTDASFDGAVLYLPKAKAHGQMLLANIVACLKPGGTLLVVGENKGGIKSAAKLLTPYSDNVNKIDSARHCAMFAAVVDKPVASFDITKWQDVSEHQVADISFKVCSLPGVFSHGELDTGTQLLLDNIDRVVSGRILDFACGAGIIGCFAGLKNPQAQVVMSDVSALAIYCSQKSAELNGVKAQVIPSNGLGALTGKFAQVFTNPPFHTGIKTDYSVTEGFMQQLKNHLQDRGSLILVANKFLRYADELDKQFKSVQTLTETTKFSVYCCRR", - "output": "cytoplasm ; 16S rRNA (guanine(1207)-N(2))-methyltransferase activity" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MVDKIERIKELVEILNKYSYDYYVLDNPSVSDKDYDKKYDELKLLEKETGVVLPYSPTLRIGDIVLDGFNKYTHKGKLWSLDKAQSLDEIKDWHNRNIKFVNDMRAQGEDLPDLKYIATKKFDGLTVNLTYNEEGMLEVSATRGNGEIGENVTAQVKTIKSIPLKLQENHDLFEVHGEAIMTQEAFEKYNSSADSPLKNLRNGAAGALRNLNVKETARRDLSAFFYDVGYKEGYQFKTYLEMMDFIKEKGLPVDDYLKVCVSIEDIKNEIDYIEKIRFDLNYDIDGLVIAIDDIRTRELLGYTVKFPKWAIAYKFEAQEATTKLVDVEWNVGRSGRIGPTAILEPVELAGVTVKRATLNNMDDIKRKGVRIGADVFIRRSNDVIPEIMGTLENTLENSEEIFPPTECPACGSHVVLNGAHYFCENTLSCKPQLVKTIVHYASRDAMNIAGFSEKTAEQLFEKLNIKSISDLYKLKKEDLINLEKFGDKKAENLLNAVEGSKECKLYSFIYALGIPNVGVKTAKDIVNKFKSIDGLKNATFEELVSVQDVGDIVAQDIIEFFKEEKVISTIDELLSLGVNPIFDEVKIVESIFKDKTVVATGTLQNYSRTEIKTKLESLGAKVSGSVSKKTDYVIAGESAGSKLTKAEELGVEVISEEEFEKMLGRES", - "output": "DNA binding ; DNA ligase (NAD+) activity ; metal ion binding ; DNA repair ; DNA replication" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MSDNLKIGLQYLTPKHALTRLAGKLASAKMGWLTTAVIKWFIKQYNVNMDEAKNPDPEAYSTFNNFFVRELEDGARPINEDDSVISHPADACVSQFGPIMDGKLVQAKGHVYSAQELLGGDEALAAEFMGGEFATLYLSPSDYHRVHMPCDATLRKMIYVPGDLFSVNPLTAENVPNLFARNERVVCIFDTEFGPMAQILVGATIVGSIETTWAETVTPPTGPAVKTWHYPLSGDDMICFKKGEEMGRFKLGSTVINLFAPNSIKFDDSMENGTPTRMGTPFAHIVK", - "output": "plasma membrane ; phosphatidylserine decarboxylase activity ; phosphatidylethanolamine biosynthetic process" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MAFIAKSFYDLSAISLDGEKVDFNTFRGRAVLIENVASLUGTTTRDFTQLNELQCRFPRRLVVLGFPCNQFGHQENCQNEEILNSLKYVRPGSGYQPTFTLVQKCEVNGQNEHPVFAYLKDKLPYPYDDPFSLMTDPKLIIWSPVRRSDVAWNFEKFLIGPEGEPFRRYSRTFPTINIEPDIKRLLKVAI", - "output": "cytosol ; glutathione peroxidase activity ; response to oxidative stress" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MQGSVTEFLKPRLVDIEQVNSTRAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVEIDGVLHEYSSKEGVQEDILEILLNLKGLAVTIEGKDEAMLTLSKSGAGPVIAADITHDGDVTIVNPDHVICHLTGNNDISMRIRVERGRGYVPASARAQTEDDDRPIGRLLVDASFSPVARIAYNVEAARVEQRTDLDKLVIDMTTNGTIDPEEAIRRSATILAEQLDAFVELRDVTEPELKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSLTEIKDVLASRGLSLGMRLENWPPASLADDL", - "output": "cytoplasm ; DNA-directed RNA polymerase complex ; DNA binding ; DNA-directed 5'-3' RNA polymerase activity ; protein dimerization activity ; DNA-templated transcription" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MWLERLELQHFRNYNQLDIEFHKGLNVFLGENAQGKTNILESIYVLALTRSHRTRTDKDLLQFQEKELSISGLLHRTSGKVPLDIHLTDKGRVTKVNHLKQAKLSNYIGHMNVVLFAPEDLQLIKGAPALRRKFIDVELGQIKPLYLSDLSNYNHVLKQRNTYLKSTDKIDENFLSVLDQQLAEYGSRVIQHRIDFLKKLEEFGNRKVQEISGNREELTIEYQTSIELTDDVNLIDKFLTELEKSRKRDLFKKNTGVGPHRDDVAFFINGMNAHYASQGQHRSLVLSLKLAEIELMKEVTREYPILLLDDVMSELDNNRQIKLLETITDTIQTFITTTSLDHLHKLPDSLKIFHIESGKVTESE", - "output": "cytoplasm ; ATP binding ; single-stranded DNA binding ; DNA repair ; DNA replication ; SOS response" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MSSAALVPADDILEPTLQSILDQKSLRWIFVGGKGGVGKTTTSCSLAIQLAKVRKSVLLISTDPAHNLSDAFGQKFGKEARLVDGFDNLSAMEIDPSASMQDLLAAGGEQGEDMGFGLGGMMQDLAFSIPGVDEAMSFAEVLKQVKSLSYEVIVFDTAPTGHTLRFLQFPTVLEKGLAKLSQLSNQFGPMLNSVLGARGGLPGGQNLDEVLSKMESLRETISEVNAQFKDADLTTFVCVCIAEFLSLYETERMIQELTSYQIDTHAIVVNQLLFPGKDSTCEQCKARRKMQKKYLDEIAELYEDFNVVRMPLLVEEVRGKEKLERFSDMLVHPYQPPQE", - "output": "endoplasmic reticulum ; ATP binding ; ATP hydrolysis activity ; metal ion binding ; protein insertion into ER membrane" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MEMASAFTLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIAGADINMIGNCKTAQEAEALARQGQQLMAEIHALPVPVIAAIHGACLGGGLELALACHGRMCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVDDVVPQSILLEAAVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPGSDAPPAPLNSVGILGGGLMGGGIAYVTACKAGLPVRIKDINPQGINHALKYSWDQLEGKVRRRHLKASERDRQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGERFSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDPAIYPLIGTQGQGRLSAPQVAERCVMLMLNEAVRCLDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMSKRGESFWKTTATDLQ", - "output": "cytoplasm ; 3-hydroxyacyl-CoA dehydrogenase activity ; 3-hydroxybutyryl-CoA epimerase activity ; enoyl-CoA hydratase activity ; NAD+ binding ; fatty acid beta-oxidation" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MSIDDLKSKIPDFAKDVRLNLSSMASDETLTPQQKYGLFVACGIASRNADVRKALVAEAAGKVDASVIQAAKAAASIMGMNNVYYRFVHLASNKDYRTMPARLRMNVISNPGVDKIDFELWSLAVSAINGCGMCIDAHEDVLRKANVTAEAIQAAVRFASIIQSAAIALEAADTE", - "output": "alkyl hydroperoxide reductase activity ; hydroperoxide reductase activity ; peroxiredoxin activity ; response to oxidative stress" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MNAMSRISRRIFLALALSLAGLAQAQLSIEITGAGANRIPVTIVDFPGDPTAARVVTATVRADLERSGLFKLVDNGTAAFDENAPVNHAEWKGKGADALAAGSIARSTDGRMEARFRLYDTQKGVSLGGAAYVTNNSQLRAAGHRIADFIYEKLTGEKGVFSTRIAYVVKARGQFLLQIADSDGQNAATALSSTEPIISPVWSPDGGRLAYVSFEKKKPVIYVHTLASGQRHIVANFKGSNSAPAWSPDGRKLAVVLSKDGNSQIYSVNADGSGLQRITQSSGIDTEPRYSADGGTIYFTSDRGGSPQVYQVGASGGDAKRVTFEGSYNVSPRPAPDGKSLAFISRREGRFQLAVMDLASRQVQVVSDSNKDESPSFAPNSRMILIATEIGGRGVLSAVSSDGRIKQRLSVAAGDVREPAWGPYYQ", - "output": "periplasmic space ; cell cycle ; cell division ; protein import" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MSDERYAASDGGGTEVGSGTRGRTTVVTKPATRPQRPTGKRSRQRAANASNTGANVEVEESSTQAAIAKEGKVKKPKKSADRSANPIVFIYNYLKQVVGEMRKVIWPNRKQMLTYTSVVLAFLAFMVALVGLADFGLAKLVLLVFG", - "output": "plasma membrane ; protein transmembrane transporter activity ; intracellular protein transmembrane transport ; protein secretion ; protein targeting ; protein transport by the Sec complex" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MSDLSHIRNFSIIAHIDHGKSTLADRFIQMCGGLTAREMEAQVLDSMDLERERGITIKAHSVTLHYKAQDGKTYQLNFIDTPGHVDFTYEVSRSLAACEGALLVVDAGQGVEAQSVANCYTAIEQGLEVMPVLNKMDLPQADPDRVKDEIEKIIGIDATDAVACSAKSGMGVDEVLERLVQSIPAPEGEIDAPLQALIIDSWFDNYLGVVSLVRVRQGRVKKGDKILVKSTGKVHLVDSVGVFTPKHTQTADLKAGEVGFIIASIKDIHGAPVGDTLTLSNTPEVEVLPGFKKIQPQVYAGLFPVSSDDFEDFRDALQKLTLNDSSLQYMPESSDALGFGFRCGFLGMLHMEIIQERLEREYDLDLITTAPSVIYELELKTGETITVDNPSKLPDVSAVNDFREPIVTATILVPQEHLGNVITLCIEKRGVQRDMQFLGSQVQVRYDLPMNEVVLDFFDRLKSTSRGYASLDYHFDRYQSANLVKLDVLINGDKVDALALIVHRDNAAYKGRALTEKMKELIPRQMFDVAIQAAIGGQIIARTTVKALRKNVLAKCYGGDVSRKKKLLEKQKAGKKRMKQVGNVEIPQEAFLAVLRLDS", - "output": "plasma membrane ; GTP binding ; GTPase activity ; guanosine tetraphosphate binding ; ribosome binding ; translation elongation factor activity ; positive regulation of translation" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "HSEGTFTSDYSKYLDNRRAKDFVQWLMNT", - "output": "extracellular region ; hormone activity" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MIAKGSEPWLFTAASVTALFAILSRATDGLPFLNYIANVGMALTFVMVIFFRDPERKVETSDTYMISPADGTVIDIRDRKICIFMFLQNVHVNRAPISGKISEIIYKKGGYLPAFCKDSERNERNEFIIHSKYGDVRVTQIAGIIARRIVTYSNVNDTVEQGQRIGMIRFGSRVDVTIPHDFDITVEKGERVLAGKTIIATIKNDRDF", - "output": "plasma membrane ; phosphatidylserine decarboxylase activity ; phospholipid biosynthetic process" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MEVLESGEQGVLQWDRKLSELSEPGDGEALMYHTHFSELLDEFSQNVLGQLLNDPFLSEKSVSTEVEPSPMSPAPLIQAEHSYSLCEEPRAQSPFTHITTSDSFNDDEVESEKWYLSTDFPSTTIKTEPITDEPPPGLVPSVTLTITAISTPFEKEEPPLEMNTGVDSSCQTIIPKIKLEPHEVDQFLNFSPKEAPVDHLHLPPTPPSSHGSDSEGSLSPNPRLHPFSLPQTHSPSRAAPRAPSALSSSPLLTAPHKLQGSGPLVLTEEEKRTLIAEGYPIPTKLPLTKSEEKALKKIRRKIKNKISAQESRRKKKEYMDSLEKKVESCSTENLELRKKVEVLENTNRTLLQQLQKLQTLVMGKVSRTCKLAGTQTGTCLMVVVLCFAVAFGSFFQGYGPYPSATKMALPSQHSLQEPYTASVVRSRNLLIYEEHSPPEEPSSPGSAGELGGWDRGSSLLRVSGLESRPDVDLPHFIISNETSLEKSVLLELQQHLVSAKLEGNETLKVVELDRRVNTTF", - "output": "endoplasmic reticulum ; endoplasmic reticulum membrane ; nucleus ; DNA-binding transcription factor activity ; transcription cis-regulatory region binding ; cartilage development ; chondrocyte differentiation ; response to endoplasmic reticulum stress ; response to unfolded protein" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MALRSAQGDGPTSGHWDGGAEKADFNAKRKKKVAEIHQALNSDPTDVAALRRMAISEGGLLTDEIRRKVWPKLLNVNANDPPPISGKNLRQMSKDYQQVLLDVRRSLRRFPPGMPEEQREGLQEELIDIILLILERNPQLHYYQGYHDIVVTFLLVVGERLATSLVEKLSTHHLRDFMDPTMDNTKHILNYLMPIIDQVNPELHDFMQSAEVGTIFALSWLITWFGHVLSDFRHVVRLYDFFLACHPLMPIYFAAVIVLYREQEVLDCDCDMASVHHLLSQIPQDLPYETLISRAGDLFVQFPPSELAREAAAQQQAERTAASTFKDFELASAQQRPDMVLRQRFRGLLRPEDRTKDVLTKPRTNRFVKLAVMGLTVALGAAALAVVKSALEWAPKFQLQLFP", - "output": "endoplasmic reticulum ; endoplasmic reticulum membrane ; endoplasmic reticulum-Golgi intermediate compartment membrane ; Golgi membrane ; nuclear membrane ; GTPase activator activity ; small GTPase binding ; acrosome assembly ; COPII-coated vesicle cargo loading ; endoplasmic reticulum to Golgi vesicle-mediated transport ; Golgi organization ; lens fiber cell morphogenesis ; lipid droplet organization ; positive regulation by host of viral genome replication ; positive regulation by virus of viral protein levels in host cell ; positive regulation of ER to Golgi vesicle-mediated transport ; positive regulation of GTPase activity ; seminiferous tubule development ; virion assembly" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MRCDATQEKRAHSESGESVFFQKFLETRQILLSGEISKDLAEGIVRQLFVLESLSVSKPIYMYVDSPGGDVDAGYAIFDVIRFVKTPVYTIGMGLVASAGVLVLLAAKKDCRFGLRNSRYLIHQPLSGMRGVATDIEIHARELEKTRSKLNALIASETGVSLDKVAQDTNRDYWLDASQALEYGLISNLIEKRADLPKK", - "output": "cytoplasm ; ATP-dependent peptidase activity ; serine-type endopeptidase activity ; proteolysis" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MNSGPLEFTVSANTNPATDAVRESILANPGFGKYYTDHMVSIDYTVDEGWHNAQVIPYGPIQLDPSAIVLHYGQEIFEGLKAYRWADGSIVSFRPEANAARLQSSARRLAIPELPEEVFIESLRQLIAVDEKWVPPAGGEESLYLRPFVIATEPGLGVRPSNEYRYLLIASPAGAYFKGGIKPVSVWLSHEYVRASPGGTGAAKFGGNYAASLLAQAQAAEMGCDQVVWLDAIERRYVEEMGGMNLFFVFGSGGSARLVTPELSGSLLPGITRDSLLQLATDAGFAVEERKIDVDEWQKKAGAGEITEVFACGTAAVITPVSHVKHHDGEFTIADGQPGEITMALRDTLTGIQRGTFADTHGWMARLN", - "output": "branched-chain-amino-acid transaminase activity ; L-isoleucine transaminase activity ; L-leucine transaminase activity ; L-leucine:2-oxoglutarate aminotransferase activity ; L-valine transaminase activity ; pyridoxal phosphate binding ; branched-chain amino acid metabolic process ; isoleucine biosynthetic process ; leucine biosynthetic process ; protein-pyridoxal-5-phosphate linkage via peptidyl-N6-pyridoxal phosphate-L-lysine ; valine biosynthetic process" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MAITKYKAAAVTSEPGWFDLEGGVRKTIDFINEAGQAGCKFVAFPEVWIPGYPYWMWKVTYLQSLPMLKRYRENSMAVDSEEMRRIRRAARDNQIFVSLGFSEIDHATLYLSQVLIGPDGAVINHRRKIKPTHVEKLVYGDGAGDTFMSVSETEIGRVGQLNCWENMNPFLKSLNVSAGEQVHVAAWPVYPGKERQVYPDPATNYADPASDLVTPEYAIETGTWTLAPFQRLSVEGLKINTPEGVEPETDPSVYNGHARIYRPDGSLVVKPEKDFDGLLFVDIDLNECHLTKVLADFAGHYMRPDLIRLLVDTRRKELITEADPNGSIATYSTRQRLGLDKPLEKKEGEDTPDVL", - "output": "cyanide hydratase activity ; nitrilase activity ; cyanide catabolic process" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MASSGPERAEHQIILPESHLSSPLVKHKLLYYWKLTGLPLPDECDFDHLILSRQWKKILESASPDTERMIKLGRAVHQTLNHNSRITGVLHPRCLEELASIEVPDSTNKFRKIEKKIQIHNTRYGELFTRLCTHIEKKLLGSSWSNNVPRSEEFNSIRTDPAFWFHSKWSTAKFAWLHIKQIQRHLIVAARTRSAANKLVMLTHKVGQVFVTPELVIVTHTNENKFTCLTQELVLMYADMMEGRDMVNIISTTAVHLRSLSEKIDDILQLIDALAKDLGNQVYDVVSLMEGFAYGAVQLLEPSGRFAGHFFAFNLQELKDILIGLLPNDIAESVTHAIATVFSGLEQNQAAEMLCLLRLWGHPLLESRIAAKAVRSQMCAPKMVDFDMILQVLSFFKGTIINGYRKKNAGVWPRVKVDTIYGKIIGQLHADSAEISHDIMLREYKSLSALEFEPCIEYDPVTNLSMFLKDKAIAHPNDNWLASFRRNLLSEDQKKHVKEATSTNRLLIEFLESNDFDPYKEMEYLTTLEYLRDDDVAVSYSLKEKEVKVNGRIFAKLTKKLRNCQVMAEGILADQIAPFFQGNGVIQDSISLTKSTLAMSQLSFNSNKKRITDCKERVSSNRNHDPKSKNRRRVATFITTDLQKYCLNWRYQTIKLFAHAINQLMGLPHFFEWIHLRLMDTTMFVGDPFNPPSDPTDCDLSRVPNDDIYIVSARGGIEGLCQKLWTMISIAAIQLAAARSHCRVACMVQGDNQVIAVTREVRSDDSPEMVLTQLHQASDNFFKELIHVNHLIGHNLKDRETIRSDTFFIYSKRIFKDGAILSQVLKNSSKLVMVSGDLSENTVMSCANIASTVARLCENGLPKDFCYYLNYIMSCVQTYFDSEFSYNNNSHPDLNQSWIEDISFVHSYVLTPAQLGGLSNLQYSRLYTRNIGDPGTTAFAEIKRLEAVGLLSPNIMTNILTRPPGNGDWASLCNDPYSFNFETVASPNIVLKKHTQRVLFETCSNPLLSGVHTEDNEAEEKALAEFLLNQEVIHPRVAHAIMEASSVGRRKQIQGLVDTTNTVIKIALTRRPLGIKRLMRIVNYSSMHAMLFRDDVFSSNRSNHPLVSSNMCSLTLADYARNRSWSPLTGGRKILGVSNPDTIELVEGEILSVSGGCTRCDSGDEQFTWFHLPSNIELTDDTSKNPPMRVPYLGSKTQERRAASLAKIAHMSPHVKAALRASSVLIWAYGDNEVNWTAALTIAKSRCNINLEYLRLLSPLPTAGNLQHRLDDGITQMTFTPASLYRCHLTFTYPMILKGYSLKKESKRGMWFINRVMLLGLSLIESIFPMTTTRTYDEITLHLHSKFSCCIREAPVAVPFELLGVAPELRTVTSNKFMYDPSPVSEGDFARLDLAIFKSYELNLESYPTIELMNILSISSGKLIGQSVVSYDEDTSIKNDAIIVYDNTRNWISEAQNSDVVRLFEYAALEVLLDCSYQLYYLRVRGLDNIVLYMGDLYKNMPGILLSNIAATISHPVIHSRLHAVGLVNHNGSHQLADTDFIEMSAKLLVSCTRRVISGLYSGNKYDLLFPSVLDDNLNEKMLQLISRLCCLYTVLFATTREIPKIRGLSAEEKCSVLTEYLLSDAVKPLLSPDQVSSIMSPNIITFPANLYYMSRKSLNLIREREDKDSILALLFPQEPLLEFPSVQDIGARVKDPFTRQPAAFLQELDLSAPARYDAFTLSQIHPELTSPNPEEDYLVRYLFRGIGTASSSWYKASHLLSVPEVRCARHGNSLYLAEGSGAIMSLLELHVPHETIYYNTLFSNEMNPPQRHFGPTPTQFLNSVVYRNLQAEVTCKDGFVQEFRPLWRENTEESDLTSDKAVGYITSAVPYRSVSLLHCDIEIPPGSNQSLLDQLAINLSLIAMHSVREGGVVIIKVLYAMGYYFHLLMNLFAPCSTKGYILSNGYACRGDMECYLVFVMGYLGGPTFVHEVVRMAKTLVQRHGTLLSKSDEITLTRLFTSQRQRVTDILSSPLPRLIKYLRKNIDTALIEAGGQPVRPFCAESLVSTLADITQITQIIASHIDTVIRSVIYMEAEGDLADTVFLFTPYNLSTDGKKRTSLKQCTRQILEVTILGLRVEDLNKIGDVISLVLKGMISMEDLIPLRTYLKHSTCPKYLKAVLGITKLKEMFTDTSVLYLTRAQQKFYMKTIGNAVKGYYSNCDS", - "output": "host cell cytoplasm ; virion component ; ATP binding ; GTPase activity ; mRNA (guanine-N7-)-methyltransferase activity ; RNA-dependent RNA polymerase activity ; negative stranded viral RNA transcription" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MSRRRVIGQAEILREPKFGNLDVAKFMNVVMLSGKKSIAESIVYGAFEAIQNKTGKDPIEIFSQALSNVKPMVEVKSRRVGGANYQVPVEVRPQRRAALAMRWIREAAKKRGEKSMAQRLANELVEASEGRGAAMKRRDEVHRMAEAHKAFSHFRF", - "output": "small ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; tRNA binding ; translation" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MTSFMSRVWCKVESTGRQLPIVLNAVLVFSITAEVSYLVLVEAPFEPEQKKTDWSTIWTGLHLFAQYFMLGNITWNASLFVKTNPSIRGVFLGGDTLGQGWRYCYNCETHTPPRCSHCYDCNVCVLRRDHHCVFFGQCVGFHNYRYFLTCLLFMWAGLLYAVVMNAEVFIFILKEGVTFHSVMLLLVPWIMLVSGQVTTRAFAFAFIADTCVVGFLLVAAFLFFHVALMLRGQTTREWYSTRRPYSLGTMANIRECLGKNWYFCWLCPLIPSPLPGDGINFKVTASLEPKKQAVH", - "output": "endoplasmic reticulum ; Golgi apparatus ; membrane ; protein-cysteine S-palmitoyltransferase activity ; peptidyl-L-cysteine S-palmitoylation ; protein targeting to membrane" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MVEAEELAQLRLLNLELLRQLWVGQDAVRRSVARAASESSLESSSSYNSETPSTPETSSTSLSTSCPRGRSSVWGPPDACRGDLRDVARSGVASLPPAKCQHQESLGRPRPHSAPSLGTSSLRDPEPSGRLGDPGPQEAQTPRSILAQQSKLSKPRVTFSEESAVPKRSWRLRPYLGYDWIAGSLDTSSSITSQPEAFFSKLQEFRETNKEECICSHPEPQLPGLRESSGSGVEEDHECVYCYRVNRRLFPVPVDPGTPCRLCRTPRDQQGPGTLAQPAHVRVSIPLSILEPPHRYHIHRRKSFDASDTLALPRHCLLGWDIFPPKSEKSSAPRNLDLWSSVSAEAQHQKLSGTSSPFHPASPMQMLPPTPTWSVPQVPRPHVPRQKP", - "output": "negative regulation of cell migration ; negative regulation of G2/M transition of mitotic cell cycle" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MTMKLIWDKFYVSIIFVLTCIILGIILMCTVVGGGNDYSEVNVSEGDSLWALADQYAGKSDMAKADFVSWVEKENNLADGHVEAGDSVVIPVHKTKLIKSDSTIQLANQ", - "output": "cytoplasm ; division septum assembly ; DNA repair ; negative regulation of cell division ; SOS response" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MHEVKQPRRIMVVTGEASGDLHGAHLIEAAGKVDPGLSFFGVGGACMAKAGCEILIPGEDLAVMGLVEVLGHFPTIWRAFRKLKKILHGPQRPDALVLIDFAEFNLLLAAQAKKAGVPVLYYVSPQVWAWRRGRVRRIASVVDRLAAIFPFEPELYQGLDIDVEYVGHPLLDEFAITCERDAFLRRLGLDPARQVIGLFPGSRKNELKYIAETILQSAVKLREKHPDAQFLLPVASSFRRQDIEALVAPYGLPVTVVDEPIYDVINACDAVISVSGTVTLQVALVGTPMAIVYKMAPLSFAIGKRLIRVPHIGLANIVAGRGVVKEFIQEDATPAMISREIDAILTDAEYNRSIRGGLATVQQRMGEGGCAARVARMVSELCREIPGKERMV", - "output": "lipid-A-disaccharide synthase activity ; lipid A biosynthetic process" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MRHYEIVFIVHPDQSEQVPAMIERYKTTITSHGGQIHRIEDWGRRQLAYMIEKLAKAHYVCMNIECDQATLDELEHAFKFNDAVLRHLIVKMKKAETGPSPMMKEVQREEAKKAAAAQPTEAQA", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MSANMHIFENPSALAEALADDVGARLAAAIAARGTASLAVSGGSTPKAFFRSLSRRELDWSKVTVTLVDERFVPPENDRSNHRLVADNLLKDGAAEARFVPLYQAAETAEAAAAIASGRTASLGAPLDVVVLGMGTDGHTASFFPGGTRLEEALDPTTPRGVITMEAEGAGEPRLTFTFSSLQDAGYLVLHIEGSGKKEVLAQAEASGDEAEMPIRAMLRRAASPLQIYWAP", - "output": "6-phosphogluconolactonase activity ; carbohydrate metabolic process ; pentose-phosphate shunt" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MSKVAKQYAGAQVYGRLLSYLKPLWKVFALAVLGNVIYALASAAMADATKYIVAAIETPSPEGRLLVPMLIIGIFALRGLGSFCGGYFMARVARGIVHRMRLELFRHLTVLPCRFFDSNSTGHLVSRITYNVDQVTGAATNAITVVLREGFTVIGLMGYMIYVSWKLTLLFLVLGPIIGVLIGYVSKRFRRISRRIQSSMGDVTHVASESIGGYRVMRTFGGEEYEFNRFMKASEYNITQALKMSLTQALSTPIIQLVISVFIALLVWLALSPEVRGNMSTGEFLAYITAATTCAKPIRQLTEVNAVIQRGISAAQDVFMQLDEPVEKDEGSYVADRVQGRLEFKSLGFAYSDEGKPALQEINLVIEPGETVALVGRSGSGKSTLVNLLPRFYDYEQGEILLDGKPLKDFALTSLRRQISIVTQQVVLFNDTVTNNIAYGALADATPEQVREAAKSADALGFIEQLEQGFDTLLGENGTRLSGGQRQRMVIARALLKDSPILILDEATSALDTHAERNIQSALETLMKGRTTLVVAHRLSTIENADKIVVMDQGRIVEVGSHRELIEKDGAYAALHKLQFSEADA", - "output": "plasma membrane ; ABC-type transporter activity ; ATP binding ; ATP hydrolysis activity ; ATPase-coupled lipid transmembrane transporter activity" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MEWWASSPLRLWLLLFLLPSAQGRQKESGSKWKVFIDQINRSLENYEPCSSQNCSCYHGVIEEDLTPFRGGISRKMMAEVVRRKLGTHYQITKNRLYRENDCMFPSRCSGVEHFILEVIGRLPDMEMVINVRDYPQVPKWMEPAIPVFSFSKTSEYHDIMYPAWTFWEGGPAVWPIYPTGLGRWDLFREDLVRSAAQWPWKKKNSTAYFRGSRTSPERDPLILLSRKNPKLVDAEYTKNQAWKSMKDTLGKPAAKDVHLVDHCKYKYLFNFRGVAASFRFKHLFLCGSLVFHVGDEWLEFFYPQLKPWVHYIPVKTDLSNVQELLQFVKANDDVAQEIAERGSQFIRNHLQMDDITCYWENLLSEYSKFLSYNVTRRKGYDQIIPKMLKTEL", - "output": "endomembrane system ; endoplasmic reticulum ; endoplasmic reticulum lumen ; EGF-domain serine glucosyltransferase activity ; EGF-domain serine xylosyltransferase activity ; glucosyltransferase activity ; UDP-glucosyltransferase activity ; UDP-xylosyltransferase activity ; axial mesoderm development ; circulatory system development ; gastrulation ; muscle tissue development ; paraxial mesoderm development ; positive regulation of Notch signaling pathway ; protein O-linked glycosylation ; protein O-linked glycosylation via serine ; regulation of gastrulation ; somitogenesis" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MSLKQHTQTIFRQQFDRESDITIKAPGRVNLIGEHTDYNDGFVLPCAINYETVISCGKRGDRQIRVIAADYENQQDIFSLDAPIVPHPEYRWADYVRGVVKHLQMRNADFGGADLVICGNVPQGAGLSSSASLEVAVGQALQSLYQLPLSGVELALNGQEAENQFVGCNCGIMDQLISALGKKDHALLIDCRTLETRAVPMPENMAVVIINSNIQRGLVDSEYNTRRQQCEAAARFFGVKALRDVEPSLFFSIQDELDPVVAKRARHVISENARTLAAADALAAGNLKLMGQLMQESHISMRDDFEITVPPIDRLVEIVKSVIGDQGGVRMTGGGFGGCIVALMPLELVEQVRTTVAQEYPAHSGGKKETFYVCQASQGAGLC", - "output": "cytoplasm ; ATP binding ; galactokinase activity ; magnesium ion binding ; galactose metabolic process" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MAVVAAAAATGSTTRSGGGGGEGTRSGRKKPPPPPLQERVPLGRRAAWAWRLAGLAVLLLLLALLALRLLRHHGGAGGDGGVWRVALVCEAWFAALCALNVSAKWSPVRFVTRPENLVAEGRTPSTTAAEYGELPAVDMLVTTADPALEPPLVTVNTVLSLLALDYPRAGERLACYVSDDGCSPLTCHALREAAGFAAAWVPFCRRYGVAVRAPFRYFSSSSSPESGGPADRKFLDDWTFMKDEYDKLVRRIKNTDERSLLRHGGGEFFAEFLNVERRNHPTIVKTRVSAVMTNAPIMLNMDCDMFVNNPQAVLHAMCLLLGFDDEASSGFVQAPQRFYDALKDDPFGNQMECFFKRFISGVQGVQGAFYAGTGCFHRRKAVYGVPPNFNGAEREDTIGSSSYKELHTRFGNSEELNESARNIIWDLSSKPMVDISSRIEVAKAVSACNYDIGTCWGQEVGWVYGSLTEDILTGQRIHAMGWRSVLMVTEPPAFMGSAPIGGPACLTQFKRWATGQSEIIISRNNPILATMFKRLKFRQCLAYLIVLGWPLRAPFELCYGLLGPYCILTNQSFLPKASEDGFSVPLALFISYNTYNFMEYMACGLSARAWWNNHRMQRIISVSAWTLAFLTVLLKSLGLSETVFEVTGKDKSMSDDDDNTDGADPGRFTFDSLPVFIPVTALAMLNIVAVTVGACRVAFGTAEGVPCAPGIGEFMCCGWLVLCFFPFVRGIVWGKGSYGIPWSVKLKASLLVAMFVTFCKRN", - "output": "Golgi membrane ; plasma membrane ; cellulose synthase (UDP-forming) activity ; mannan synthase activity ; cell wall organization ; cellulose biosynthetic process ; plant-type primary cell wall biogenesis" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MLQPARTKYRKMQKGRMRGKAYRGSDLAQGEYGLQATECGRLTSRQIEAARVAITRYVKRGGKLWIRVFPDKPITKKPAETRMGTGKGNVEFYVAVIKPGRVLYELAGVDDASAKKAFHLAAHKLPVATKMVKRGETL", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; tRNA binding ; translation" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MPKYYCEYCDIYLTHSSPVGRRQHNQGRKHISAKIEYFQNLLREEGITPQNFLGFLGNQGYNNTLANPMMNNFMPGNYNAYMKYNPMRNYHHSNRNSNYQHSIGMHNNKYSRAGYVPPGSNKYPNNHFHNNKRINNIPKPYNNYTNKPITNSSYKNDKQDYRNNNESNDNMNSNNFSNYQVNKENANFVNKNNEQPN", - "output": "commitment complex ; U1 snRNP ; U2-type prespliceosome ; mRNA binding ; U1 snRNA binding ; zinc ion binding ; mRNA 5'-splice site recognition ; spliceosomal snRNP assembly" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MASDGARKQFWKRSNSKLPGSIQHVYGAQHPPFDPLLHGTLLRSTAKMPTTPVKAKRVSTFQEFESNTSDAWDAGEDDDELLAMAAESLNSEVVMETANRVLRNHSQRQGRPTLQEGPGLQQKPRPEAEPPSPPSGDLRLVKSVSESHTSCPAESASDAAPLQRSQSLPHSATVTLGGTSDPSTLSSSALSEREASRLDKFKQLLAGPNTDLEELRRLSWSGIPKPVRPMTWKLLSGYLPANVDRRPATLQRKQKEYFAFIEHYYDSRNDEVHQDTYRQIHIDIPRMSPEALILQPKVTEIFERILFIWAIRHPASGYVQGINDLVTPFFVVFICEYIEAEEVDTVDVSGVPAEVLCNIEADTYWCMSKLLDGIQDNYTFAQPGIQMKVKMLEELVSRIDEQVHRHLDQHEVRYLQFAFRWMNNLLMREVPLRCTIRLWDTYQSEPDGFSHFHLYVCAAFLVRWRKEILEEKDFQELLLFLQNLPTAHWDDEDISLLLAEAYRLKFAFADAPNHYKK", - "output": "14-3-3 protein binding ; GTPase activator activity ; protein homodimerization activity ; activation of GTPase activity" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MEVDINGESRSTLTTLPFPGAEANSPGKAEAEKPRCSSTPCSPMRRTVSGYQILHMDSNYLVGFTTGEELLKLAQKCTGGEESKAEAMPSLRSKQLDAGLARSSRLYKTRSRYYQPYEIPAVNGRRRRRMPSSGDKCTKSLPYEPYKALHGPLPLCLLKGKRAHSKSLDYLNLDKMIKEPADTEVLQYQLQHLTLRGDRVFARNNT", - "output": "ciliary transition zone ; cytoplasm ; cilium assembly ; epithelial cell migration ; fibroblast migration ; inflammatory response ; negative regulation of cytokine production involved in inflammatory response ; negative regulation of epithelial cell migration ; negative regulation of fibroblast migration ; negative regulation of inflammatory response ; protein transport" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MAAAMMNKSVLLNKQCGKPAAVPKVVMSKGGFARTSAVNKNRDMMVWQPFNNKMFETFSFLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYWTMWKLPMFGCTDGSQVLSEIQACTNAFPDAYIRLVCFDANRQVQISGFLVHRPPSATDYRLPADRQV", - "output": "chloroplast ; ribulose-bisphosphate carboxylase activity ; photorespiration ; reductive pentose-phosphate cycle" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "YYTPDYDTKDTDILAAFRMTPQPGVPPEEAGAAGAAESSTGTWTTVWTDGLTSLDRYKGRCHDIEPVAGEVNQYIAYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPAYSKTFIGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFVAEALFKAQAETGEIKGHYLNATAGTCEEMLKRAIFARELGAPIVMHDYLTGGFTANTSLAFYCRDNGLLLHIHRAMHAVIDRQRNHGIHFRVLAKALRMSGGDHIHAGTVVGKLEGEREVTLGFVDLLRDDYIEKDRSRGIYFTQDWVSMPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNE", - "output": "chloroplast ; magnesium ion binding ; monooxygenase activity ; ribulose-bisphosphate carboxylase activity ; photorespiration ; reductive pentose-phosphate cycle" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA", - "output": "nucleosome ; nucleus ; DNA binding ; protein heterodimerization activity ; structural constituent of chromatin" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MSRSFFATVLGLALAAMTVMAAPADAKSRIKDIVAFEGVRDNQLIGYGIVVGLNGSGDSLRNAPMTKQSLEAMLERQGVNVRDGNLNTKNTAAVMVTANLPPFSAAGARMDVTVSTLGDAKSLLGGTLLVTALQGADGQTYAVAQGSVQTGSVSAGGASGSSVTKGVPTAGRIAAGGIIEKETGFQMVSMDVLRMTLRNPDFTTSRRIADVINGRFPGCAQAQNPTIVAVRPPAGMDMISFVTAIENLEVEPDAPAKVIIDEVAGVIVMGDDVRISQVAIAQGNLTISVQENPAVSQPTPFSRGGQTVVVPQSAVSIEEEKGKKLLTLGGGASLKSLIGGLNALGVTPRDMISILQAIKASGALQAEIEVM", - "output": "bacterial-type flagellum basal body, distal rod, P ring ; outer membrane-bounded periplasmic space ; structural molecule activity ; bacterial-type flagellum-dependent cell motility" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MYPRGVKRSQHDRHKQTAFRTIKRSITHRPTSKFISHFAKNFRGKLAPLKQLDESRLDALSLTELEQLKTIIEEKQQEKRAQNNAITFLPNLPTVPFADTNFSIKSLGLRPYNGDARDPKQRIRDRFPQTHERICLLTNDILETDLLLRYRQCLDSLTREENQQLMGDRIFSLTNSPCLAFTVATVEEACSYFKFHDLHNLPVNPQDLFMYTITVMKFEFFNKLNMAKLTCVFNDNGHGDIEYRKLRQLCGKPVLDREMPNSEFEVQQQTPDSFRHPIQQAMSIVVTFARILRQIKEHIIRTKKPQFIRDFDTERVAERYECGLISRLIGKQFSNHKCDDVSCQNRIERIMAPWKPSLFFCTYFAKDAPKFKLFPNLPHEYRNLSFTCPKVDMEPSCSYSTSRDLPQTSHRSHKNQGTPKVKSKVCVEKPDTSNLTTTKTTTEILIEESMETDNKIPDPRELNFNQAKQDEIVIININENVNSKHESESSVEMDLDLDYEADTCETNLNTYSSDSE", - "output": "host cell cytoplasm ; host cell nucleus ; viral tegument ; metal ion binding ; regulation of DNA-templated transcription" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MPKQKIRIRLKAFDHAILDQSAQKIVETAKRTGAEVSGPIPLPTEKDIITILRAPHKYKDSREQFEIRTHKRLIDILNPTPKTVDALMRLDLPSGVDIEIKL", - "output": "ribonucleoprotein complex ; ribosome ; structural constituent of ribosome ; tRNA binding ; translation" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MAKTRVYELAKELKVTNKDLIDTMARLGIYTRSHMSVLENGEVIKVRNHYRQQWRAAKLARMHREQATLKGEGPVPTRGVPDAPRAEEVPSRQVPAPETGAPAQATGATRQPATGSARPANTDETRVQEHKPATAARQAGDAPAAEGTAAAGQPLDGKELRQAVANGQGTEEPRQQPAATGQRAQGGEAGRGQQSRQKKKRRGEGRSRQDENKGSAREDQANRFATRDKEAAPSAGQQSPAEKGQRRPAHSKPLRIPKPPEAVTKDLPEKRRDRSNARPGAKPAESGRSRKREMENQLEERLMRRDKNKGKAQKHKETPKVVFKITLTGSITVQELAKRIGKTAAEVIKYLMGQGIMATINQELDLETAALVAQDLGAIVEIKAEKPITELEDLVDPPETLRERPPVVTVMGHVDHGKTSLLDAIRRTNVTASEAGGITQHIGAYQVRLKNRKITFLDTPGHAAFTAMRARGAQATDIAILVVAADDGVMPQTIEAINHAKAAGVPIVVAINKIDRPEANPERVKQQLTEYGLVPEEWGGDTIMVPVSAVTKEGINDLLEMVLLTADVAELKANPDRPARGIVIEAKLDRGRGPVATMLVQKGTLKIGDNLVAGSVYGRVRAMIDDRGERVNSAPPSTPVEVLGLSELPEAGDIFQVVEDEKLARQIASSRQEEKRQEELKAASKTTLDDLFKQMEAGEVKELNLVIKGDVQGSVEALRGALEQLSTSEVKVNLLHGGVGAITETDVMLAAASKAIIIGFNVRPEANVRKAAEEAGVEIRLYRVIYEVIDDVKAAMSGLLEPEEREVILGRAEVRATFKVPKAGTVAGCFVTEGKIQNRALARVIRDGVVVFEGRIESLKRFKDDVREVAQGYECGVGLEKFNDIKEGDVIEAYTIEEIQREL", - "output": "cytoplasm ; GTP binding ; GTPase activity ; translation initiation factor activity" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "METQLSNGPTCNNTANGPTTVNNNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGVKSRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNKTHKA", - "output": "cerebellar granule cell to Purkinje cell synapse ; ribonucleoprotein complex ; synapse ; RNA binding ; cellular response to leukemia inhibitory factor ; regulation of synapse assembly" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MSWHQAVWNEPLIFEYKGKGRIGFKIPEEEELKKEISINIPEKLRRKEIDLPELSELEVIRHFIRLSQMSFGVDNGMVPLGSCTMKYNPKIEEEAELLTQNLHPLQDDSTVQGILEVLYYMQKWLAEITGMDLCSLQVPAGAAGELAGVLMIKKYHETKGRGNRDEMLVADTAHGTNPASASMENFKVIYIKSNSEGLVDVDILKEIVSERTAGFMLTNPNTLGLFEENILDIAKYIHSVDAKLYYDGANLNGILGVVRPGDMGFDIVHLNLHKTFAVPHGGGGPGAGAICAKGEMVNFLPYPLVEKKDGKYSLSYIPKYSIGKIATFYGNVGNVVRAYTYILGLGAEGISMIGKMSTLATNYLISQLKNVRGLELIAPYRPRKHEVVFSAKTLAKETGVTANDVAKALLDRGFYAPTIYFPPNVEEALMIEPTETEPKEVLDSFAIAIKEIINTAYSNPKEILDTPKNTSVKRLDQVIANHPSSVTPTYRVKRLREEGKIGSLK", - "output": "glycine dehydrogenase (decarboxylating) activity ; glycine decarboxylation via glycine cleavage system" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MEVVIVPDAADAAALVADTIGALLEREPEPVLGLATGSSPLAVYDELAARYERGEVSFANARAFMLDEYVGLPADHPERYRTVIEREFAGRVDFAPGAVQGPDGTAEDVAAACAAYEQAITASGGVDLQILGIGTDGHIAFNEPGSSLASRTRIKTLTEQTRRDNARFFGGDVDAVPTHCLTQGLATIMAAKHIVLLASGRGKAEAIHHLVEGAVSAMWPATILQHHPHVSVLVDPAAASRLQLADYYRQTYAAKPDWQGL", - "output": "glucosamine-6-phosphate deaminase activity ; carbohydrate metabolic process ; N-acetylglucosamine metabolic process ; N-acetylneuraminate catabolic process" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MELKEKRVFVAGLGVSGVALCRVLVNLGANVIAYDRKNEIALKEALEELKDLPVEIKLGEFKEEFLKGIELVVLSPGISLESEIVKKAKDMGLEILGEVELAYRLSKAPIYAITGTNGKTTTTSLLGEMFRNAGRKVYVAGNIGYPLIYAALEAGPNDHIVAEISSFQLETVKEFRPKISCIINITPDHLDRHKTFENYANIKGRIFENQREEEYVVLNYDDPVTWGLKERAKAKVFPFSRKKVLENGAYVKEGFLYLQNKKVIKVEDIYIPGEHNLENALAASSVAYLSGIEVDAIETTLRTFKGVEHRIEFVAEIEGIKFYNDSKGTNPDASIKAIQALKTPIVLIAGGYDKGSEFDEFVKTFDKKVRKLILIGQTAQKIKKTALKYSYPEEDIFLVDSLEEAVRKAYEVAEKGDSVLLSPACASWDMFKNFEERGKAFKKAVMDLRR", - "output": "cytoplasm ; ATP binding ; UDP-N-acetylmuramoylalanine-D-glutamate ligase activity ; cell cycle ; cell division ; cell wall organization ; peptidoglycan biosynthetic process ; regulation of cell shape" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MDNFLKQISSNVKKPIAELEDPDAVIKFHYMNISFNFPDLYYCNNNLFDKPENNLLDISKSLLMLNSFSHECFILQDILRVIRRYGHVYDVYFLPIGWLVGHGEAPKYHASIKLIRSNTQEIIDGIIRRQLSQYGIQGDNLSIFVDSSNEVAINRHSIIGARQLNPICVVSFYPFDPEHKVFFVIYVGRYKDKYCGISYVADREDMYKVINRIYPYVSCFYLVSDGIINFHTTPVANHTRNIKPLPVNYCNTLCEIVYDFEYLKFEQGVMSIPVFMPFVPKQFVSIINLPDDILITCTASSNIEYITHIDNKKLKRILIIIKDKFLKGTIMQGTFKKVNIIRHKKYTYTITYSSFDCPKLEDTKSSLPSTCNKAILDGRRYVTKTFNDTI", - "output": "virion component ; DNA binding ; viral process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MMSNDRKVTEIENSPVTEVRPEEHAWYPDDSALAAPPAATPAAISDQLPSDRYLNRELSWLDFNARVLALAADKSMPLLERAKFLAIFASNLDEFYMVRVAGLKRRDEMGLSVRSADGLTPREQLGRIGEQTQQLASRHARVFLDSVLPALGEEGIYIVTWADLDQAERDRLSTYFNEQVFPVLTPLAVDPAHPFPFVSGLSLNLAVTVRQPEDGTQHFARVKVPDNVDRFVELAAREASEEAAGTEGRTALRFLPMEELIAAFLPVLFPGMEIVEHHAFRITRNADFEVEEDRDEDLLQALERELARRRFGSPVRLEIADDMTESMLELLLRELDVHPGDVIEVPGLLDLSSLWQIYAVDRPTLKDRTFVPATHPAFAERETPKSIFATLREGDVLVHHPYDSFSTSVQRFIEQAAADPNVLAIKQTLYRTSGDSPIVRALIDAAEAGKQVVALVEIKARFDEQANIAWARALEQAGVHVAYGLVGLKTHCKTALVVRREGPTIRRYCHVGTGNYNSKTARLYEDVGLLTAAPDIGADLTDLFNSLTGYSRKLSYRNLLVAPHGIRAGIIDRVEREVAAHRAEGAHNGKGRIRLKMNALVDEQVIDALYRASRAGVRIEVVVRGICALRPGAQGISENIIVRSILGRFLEHSRILHFRAIDEFWIGSADMMHRNLDRRVEVMAQVKNPRLTAQLDELFESALDPCTRCWELGPDGQWTASPQEGHSVRDHQESLMERHRSP", - "output": "polyphosphate kinase complex ; ATP binding ; metal ion binding ; polyphosphate kinase activity ; phosphorylation ; polyphosphate biosynthetic process" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MKILYSLRRFYHVETLFNGTFVLAGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVLDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGLGAFLLVLKALYFGGVYDTWAPGGGDVRKITNLTLSPGVIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICVLGGIWHILTKPFAWARRAFVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFFFVGHLWHAGRARAAAAGFEKGIDRDLEPVLYMTPLN", - "output": "chloroplast thylakoid membrane ; photosystem II ; chlorophyll binding ; electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity ; metal ion binding ; photosynthetic electron transport in photosystem II" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYDQEMETAKTSSSVEKSYELPDGQVITIAADRFRCPEVLFQPSFIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMRQGNHCLAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF", - "output": "cytoplasm ; cytoskeleton ; ATP binding ; hydrolase activity" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MNLFEKLTNQMKETLDSAASLALHSSNQEISLAHIYWALLSNHQSVLNQALNKMNIDKTALELQARSEVDKLPKSSQVQKENLSISKELSSALNLAQGEAIKNGDSFIAVDMFLIANLKESTFVAIFKPLVDIAEFKKTLLSLRGESKIESQSGDDNLESLSKFGIDLTQKALENTLDPVIGRDDEINAMMQILIRKSKNNPILLGEPGVGKTAVVEGLAQRIVAKAVPTSLQNKKLIALDMSALIAGAKYRGEFEERLKNVVDEVKKAGNIILFIDEIHTIVGAGASEGSMDAANILKPALARGELHTIGATTLKEYRKYFEKDAALTRRFQPINVNEPSINEALQILRGIKPNLEAHHNVNITDAALVAAAKLSSRYITDRFLPDKAIDLIDEAAAELKMQIESEPLELSKIKKHIANLEVEKQALNMEKTNVNEARVLEIDKELENLREEKMSLEGKFEQEKSVFTRIATIKAELDSLKRESELAKRSGDYNKAAEIDYGKIPDIQAQEAALHKQWEEMQQNGTLLKNAVTQESIAGVVSRWSGIPIKKMLQSQKERILGIESELAKSVVGQDDAIKAIARAIKRNKAGLNDASRPIGSFLFLGPTGVGKTQCAKTLAEFLFDNAKSLVRIDMSEYMEKHAVSRLVGAPPGYVGYEEGGVLTEAIRRKPYSIVLFDEVEKAHPDVFNILLQVLDDGRLTDSKGVSVDFSNTIIILTSNIASDKIMEIGDKQERQKAVKEALKMYFKPEFLNRLDDVVVFNPLGLADITQIVDIMFKSLAKRALEKGINVTLSQEAREHIAQVGFDSVYGARPLKRALYEEVEDRLADLILRDEIKEGDRVNFALKNGEICTHIEKE", - "output": "cytoplasm ; ATP binding ; ATP hydrolysis activity" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MSIRAEEISALIKQQIENYQSEIEVSDVGTVIQVGDGIARAHGLDNVMAGELVEFSNGVMGLAQNLEENNVGIIILGPYTEIREGDEVRRTGRIMQVPVGKELIGRVVNPLGQPVDGLGPINTTNTRPIESPAPGVMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTAVALDTIINQKDEDMICIYVAIGQKESTVRNVVETLRKHGALEYTIVVTASASQPAPLLYLAPYAGVTMGEEFMYNGKHVLVVYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSDAKGGGSLTALPFIETQAGDVSAYIPTNVISITDGQIFLQSDLFFSGVRPAIDAGTSVSRVGGSAQIKAMSKVSGTLRLDLASYRELEAFAQFGSDLDKATQAKLNRGARTVEVLKQGLHKPLRVEKQVIILYALTRGFLDDIPVVDITRFEEEFHAWLDSNATDLLEEIRTTKKLADDDKFAAAINGFKKVFVASE", - "output": "plasma membrane ; proton-transporting ATP synthase complex, catalytic core F(1) ; ATP binding ; proton-transporting ATP synthase activity, rotational mechanism ; proton-transporting ATPase activity, rotational mechanism" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MSKFIVIEGLEGAGKSTAIKNVLATLAKHGITAPVTTREPGGTPLAEKMRELVKQGHPDEPLTDMAELLLLYAARAQLVGNVIKPALAAGNWVVGDRHDLSSQAYQGGGRGFDRELMATMKRTVLGDFTPDLTIYMDIDPKLGLQRASARGELDRIEQMKLDFFERSRERYLEFANNDESIITIDAGQDLDTVTASIIAALEIWLATNGN", - "output": "ATP binding ; thymidylate kinase activity ; dTDP biosynthetic process ; dTTP biosynthetic process ; phosphorylation" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MKGLVIKNTGSWYQVKTDNGQLVECKIKGNFRLKGIRSTNPVAVGDRVQIILNQEGTAFISEIEDRKNYIIRRSSNLSKQSHILAANLDQCMLVVTVNYPETSTTFIDRFLASAEAYRVPVKILFNKVDAYDEDELHYLDSLITLYTQIGYPCFKISALTGEGVDTIREELKGRVTLFSGHSGVGKSTLINALVPGLEVKTAEISAYHNKGMHTTTFSEMFPVPGDGYIIDTPGIKGFGTFDMEEEEIGHYFPEIFKTSANCKYGNCTHRQEPGCAVRKAVEEHYISESRYTSYLSMLEDKEEGKYRAAY", - "output": "cytoplasm ; GTP binding ; GTPase activity ; metal ion binding ; rRNA binding ; ribosomal small subunit biogenesis" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MVLSAADKGNVKTVFGKIGGHAEEYGAETLQRMFQTFPQTKTYFPHFDLQPGSAQIKAHGKKVAAALVEAANHIDDIAGALSKLSDLHAQKLRVDPVNFKFLGHCFLVVLAIHHPSLLTPEVHASMDKFLCAVATVLTAKYR", - "output": "hemoglobin complex ; heme binding ; iron ion binding ; oxygen binding ; oxygen carrier activity" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MGTDNHSVRVSVRGIYATALTKRLLDADYEIVQASPVIRERFDIDFDTVYNTVTVTTTDDHQGVGIHGTESAVRSVADVLTSCGRDTLAWDDLTPPGVIFTAQITETQGSGAICALIPAENPDTESKTEPDLNDVHIPDESVATGYLPYDSTDKHIEQGDIMTVQSHRSMPPWDNTDQRADAVVGTTLRANGGLATLIQGHEGVTVDTYDDEDARELAGMIELIDIDLPTGWGIEVNHAATQASLTALKSGLERAIDRAEDISDGAVAEEVTSTGRWLWFGRESRFALDEIRRSVITTIHGHHRIKAAGETASAGVDLAEALCGDIGDGNVQIQHNEFPFEVVTQQFGPTEGERVELYHGKPEGHAFSLGQGEVTDWDANGTIEVTRRISGHGSGTYDELGTPRESGDTAVTRVREGRWWYPTVYRSRDGEHKGTYVNICTPIECFPKSIRYVDLHVDVVKYPDGTVERVDDDELNTAVTAGHIPPALAEKAQSVASSLERALDK", - "output": "mRNA 3'-UTR AU-rich region binding ; RNA endonuclease activity, producing 5'-phosphomonoesters ; rRNA processing" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MFTDMVSKLTSLQQELLSALLDSGVTKDVLVQALEDLCPCPAEFGIKIEKPLSPSSANGGSDCGDSKPVFLTLTGAQGKGGKLSGDEGSEDGDDFDTPPILRELQSLNTEEAAEQRAEVDRMLSEDPWRVARTIKGYMQQHNIPQREVVDVTGLNQSHLSQHLNKGTPMKTAKRAALYTWYVQKQREIDRQFDRVQGSDPSDSASQDQVLFFFPEFNHGGHSSGAAGGSGAAVGDEGEPGSKRMRRNRFKWGPASQEILYQAYERQKNPSKEEREALVEECNRAECVQRGVSPSKAHGLGSNLVTEVRVYNWFANRRKEEAFRQKLAMDTYTPHMNPLLSHTASLSHHHSSESKLRYSQQAASEVTSSTTISHPSVLQQVSPGGLDHCHGLLSTDAKMISVSGGVLPPVSTLTNIHSLSQSSHHHHHHHHQQAQSLIMSLAAQSLTSPQSQSVPVINSVSGLTTLQPMQFPQSSSLTQLTTAHISQQPFAQSHMYSPKQEAGQFSHPSRYSTMDSSTITHLGSSKQCPLQAW", - "output": "nucleus ; DNA-binding transcription factor activity, RNA polymerase II-specific ; RNA polymerase II cis-regulatory region sequence-specific DNA binding ; anterior/posterior pattern specification involved in pronephros development ; insulin secretion ; liver development ; pancreas development ; positive regulation of DNA-templated transcription ; regulation of transcription by RNA polymerase II" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MAATMMNKTVVLSKGCTKPSAVPKVSINRKGFLNTAMNKKREMMVWQPFNNKMFETFSYLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYWTMWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDANRQVQISGFLVHRPPSATDYRLPADRQV", - "output": "chloroplast ; ribulose-bisphosphate carboxylase activity ; photorespiration ; reductive pentose-phosphate cycle" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MQETFKFLRCNSQGEAVEDKYSLKTLKNHFVVRDEYNNLFRVFSSRDDFWEWEADQPFEQKCFHEVVFGFFPQRLKFDIDFPVNKSYSEEDNDDNVYNILDIIINVIMDVFYETYSLPYNINLTREQILLTDSIGLNKKRELKYSFHIILYTYSVLNNNEAKAFTSKVLENLPKHVYPFVDPQVNKSIQNFRIIGSHKKGSMRVKMFNEELADVFETSMTTKKSDTLITTPFETTCLPCILTHVKEMTNSCDSIQQNELEEVLKFAGVLCKNHCFLRVHKNLVLFKRTSPSYCEICKRMHDKDNTLILRVAGNKVYQHCRHDNKHSLLMGSLSGTTNFVEIYVDQVMTKSIEVHESILFEELPDTQKHIYDESSMREYERVPTLVVKAQMKIGKTIQLRNYLQKYYGNDSISKQQTIRFVTFRQIFSKNIQTRLPNFTLYSEVTGDLDSYERVIIQVESLFRLTSTAEPVDLLILDEVESIFNQFNSGLHKYFAPSFAIFMWMLETANHVICLDANLGNRTYNILQRFRGDVPIFFHWNQYQKAQNDMYYFTSSREIWLNNLLKDLLEDKKIVIPTNSLMEARLLQTFIQKKFPEKKIGFYSSKSTAHERESHFNNVSYYWGLIDILIYTPTISAGVSYEDKRFDVLYGFFNNMSCDVETCCQMLGRVRELKSKTYKICLQGKQNYFPETIEDIETFTLQKRDTLFQTINNHQLSFTYSKETGRPIYYKTPYYHLWLETMRIQHLSKNHFITRFINQVADTGAKVFILTGEKLETVKQYTSIKMEIKHQDYVNIASAETIDANKALLIKQNLKEGITVDQQDLFAYEKYKLLEFYAWHGNKITPKFVEQYNSFMTKQNYTGRVQISRGKTVHESLTMLQTQELNFHQWAMQHAEHHDLQFNYSFQSHMYAIMLLTKCGFKCVQDPNILTNEQLMTKLVDEFVQYDLSAVSFEFKLKKPNKMDPQTILKFINKVLGIRYGLKIHHNKGNYYIKNTKAGSLIPFVRQQIKQSPCVVSNLLPITETFSTKEESSPTREETSSIKEKTFTET", - "output": "ATP binding ; DNA replication origin binding ; DNA replication" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MTKFVFVTGGVVSSLGKGIASASLAAILESRGLKVTLIKLDPYINVDPGTMSPFQHGEVFVTDDGAETDLDLGHYERFIETRMKQANNFTTGRIYQSVLEKERRGDYLGKTVQVIPHVTNEIQEFIKRGAGIGTPDAVDVAICEVGGTVGDIESLPFLEAVRQLSLKLGPNNSAFVHLTYLPWIAAAGELKTKPTQHTVQKLREIGIQPDALLCRALHAVPEEEKEKISLFTNVAEWGVISMWDVDTIYKVPRMLHEQGLDGLICDKLRLNTPPANLKRWDDLVYETEHPRGEVQIAMVGKYVELSDAYKSVNEALKHAGMQSHVRVKITHLDSETITDDNAAQQLAQYDAILVPGGFGSRGVEGKISTARYAREHKVPYLGICLGMQVATIEYARHVAGLAGANSTEFDAHCKHPVIALITEWKDEDGTIKTRDANSDLGGTMRLGAQSSDVQPGTLAHSIYGDVVTERHRHRYEANVQYLDKLRTAGLVISALTQREHLTEIVELPKSVHPWYIGVQFHPEFKSTPWSGHPLFNAFIKAAVEHQKPAAKA", - "output": "ATP binding ; CTP synthase activity ; glutaminase activity ; metal ion binding ; 'de novo' CTP biosynthetic process ; glutamine metabolic process" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MESQQLSNYSPISHGSACASVTSKEVHTNQDPLDVSASKTEECEKASTKANSQQTTTPASSAVPENPHHASPQPASVPPPQNGPYPQQCMMTQNQANPSGWSFYGHPSMIPYTPYQMSPMYFPPGPQSQFPQYPSSVGTPLSTPSPESGNTFTDSSSADSDMTSTKKYVRPPPMLTSPNDFPNWVKTYIKFLQNSNLGGIIPTVNGKPVRQITDDELTFLYNTFQIFAPSQFLPTWVKDILSVDYTDIMKILSKSIEKMQSDTQEANDIVTLANLQYNGSTPADAFETKVTNIIDRLNNNGIHINNKVACQLIMRGLSGEYKFLRYTRHRHLNMTVAELFLDIHAIYEEQQGSRNSKPNYRRNLSDEKNDSRSYTNTTKPKVIARNPQKTNNSKSKTARAHNVSTSNNSPSTDNDSISKSTTEPIQLNNKHDLHLGQELTESTVNHTNHSDDELPGHLLLDSGASRTLIRSAHHIHSASSNPDINVVDAQKRNIPINAIGDLQFHFQDNTKTSIKVLHTPNIAYDLLSLNELAAVDITACFTKNVLERSDGTVLAPIVQYGDFYWVSKRYLLPSNISVPTINNVHTSESTRKYPYPFIHRMLAHANAQTIRYSLKNNTITYFNESDVDWSSAIDYQCPDCLIGKSTKHRHIKGSRLKYQNSYEPFQYLHTDIFGPVHNLPKSAPSYFISFTDETTKFRWVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEKNGITPCYTTTADSRAHGVAERLNRTLLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSLASPKSKKSASQHAGLAGLDISTLLPFGQPVIVNDHNPNSKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQGKESRLDQFNYDALTFDEDLNRLTASYHSFIASNEIQESNDLNIESDHDFQSDIELHPEQPRNVLSKAVSPTDSTPPSTHTEDSKPISEINLRAPREVDPNISESNILPSKKRSSTPQISNIESTGSGGMHKLNVPLLAPMSQSNTHESSHASKSKDFRHSDSYSNNETNHTNVPISSTGGTNNKTVPQISDQETEKRIIHRSPSIDASPPENNSSHNIVPIKTPTTVSEQNTEESIIADLPLPDPPPEPPTELSDSFKELPPINSRQTNSSLGGIGDSNAYTTINSKKRSLEDNETEIKVSRDTWNTKNMRSLEPPRSKKRIHLIAAVKAVKSIKPIRTTLRYDEAITYNKDIKEKEKYIEAYHKEVNQLLKMKTWDTDRYYDRKEIDPKRVINSMFIFNKKRDGTHKARFVARGDIQHPDTYDTGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIRPPPHLGMNDKLIRLKKSHYGLKQSGANWYETIKSYLIKQCGMEEVRGWSCVFKNSQVTICLFVDDMILFSKDLNANKKIITTLKKQYDTKIINLGESDNEIQYDILGLEIKYQRGKYMKLGMENSLTEKIPKLNVPLNPKGRKLSAPGQPGLYIDQDELEIDEDEYKEKVHEMQKLIGLASYVGYKFRFDLLYYINTLAQHILFPSRQVLDMTYELIQFMWDTRDKQLIWHKNKPTEPDNKLVAISDASYGNQPYYKSQIGNIYLLNGKVIGGKSTKASLTCTSTTEAEIHAISESVPLLNNLSHLVQELNKKPITKGLLTDSKSTISIIISNNEEKFRNRFFGTKAMRLRDEVSGNHLHVCYIETKKNIADVMTKPLPIKTFKLLTNKWIH", - "output": "cytoplasm ; nucleus ; retrotransposon nucleocapsid ; aspartic-type endopeptidase activity ; ATP binding ; DNA binding ; DNA-directed DNA polymerase activity ; metal ion binding ; peptidase activity ; ribonuclease activity ; RNA binding ; RNA-directed DNA polymerase activity ; RNA-DNA hybrid ribonuclease activity ; DNA integration ; DNA recombination ; proteolysis ; transposition, RNA-mediated" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "METLLGGLLAFGMAFAVVDACPKYCVCQNLSESLGTLCPSKGLLFVPPDIDRRTVELRLGGNFIIHISRQDFANMTGLVDLTLSRNTISHIQPFSFLDLESLRSLHLDSNRLPSLGEDTLRGLVNLQHLIVNNNQLGGIADEAFEDFLLTLEDLDLSYNNLHGLPWDSVRRMVNLHQLSLDHNLLDHIAEGTFADLQKLARLDLTSNRLQKLPPDPIFARSQASALTATPFAPPLSFSFGGNPLHCNCELLWLRRLERDDDLETCGSPGGLKGRYFWHVREEEFVCEPPLITQHTHKLLVLEGQAATLKCKAIGDPSPLIHWVAPDDRLVGNSSRTAVYDNGTLDIFITTSQDSGAFTCIAANAAGEATATVEVSIVQLPHLSNSTSRTAPPKSRLSDITGSSKTSRGGGGSGGGEPPKSPPERAVLVSEVTTTSALAKWSVSKSTPRVKMYQLQYNCSDDEVLIYRMIPASNKAFVVNNLVSGTGYDLCVLAMWDDTATTLTATNIVGCAQFFTKADYPQCQSMHSQILGGTMILVIGGIIVATLLVFIVILMVRYKVCNHEAPSKMAAAVSNVYSQTNGAQPPPPSSAPAGAPPQGPPKVVVRNELLDFTASLARASDSSSSSSLGSGEAAGLGRAPWRLPPSAPRPKPSLDRLMGAFASLDLKSQRKEELLDSRTPAGRGAGTSARGHHSDREPLLGPPAARARSLLPLPLEGKAKRSHSFDMGDFAAAAAGGVVPGGYSPPRRVSNIWTKRSLSVNGMLLPFEESDLVGARGTFGSSEWVMESTV", - "output": "postsynaptic membrane" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MSRKVLLVGDGAVGSNFANDLLQTTQVDELVICDLNKDRAAGDCLDLEDMTYFTGQTKLRAGDYSDAADADVVVITAGVPRKPGESRLDLIKKNEAILRSIVDPVVASGFSGIFVVSANPVDILTTLTQKLSGFPKKRVIGTGTSLDSARLRVELAKRLQVPIESVNAWVLGEHGDSSFENFSSAVVNGKPLLDYPGMTEAALDEIEAHVREKGSEIIVKKGATYYGVAMMLAKIVTAILENNDLALPLSAPLHGEYGIKDEIYLGTLAIINGQGISHVLELPLNDSELAKMRASAATIKATLDSLG", - "output": "cytoplasm ; L-lactate dehydrogenase activity ; glycolytic process" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MLNAAGGAGCDPSSPTATSPMRILILLLAAALAGAFTLFAFAPYRLFWLMPLCLAALVELLQREPRRAFWLGYAWGLGAYVSNFRWIYDSLHDVAGLPAWIAAPLVLLLPAYLALYPGLASWLACRIDPRPGVRWLLAFPAAWELGEWLRGWVMTGFPWGAAGYSQITESPLAGYAPLGGIHLVNYLVALSAAALAMLARAGMRQRIGILIAAALAWGSGVWLRDIEWTTPAGKPITVALAQGNIAQELKWSPENLENSLLTYYRQVAMTRADLMILPETALPLFLDDLPSGYLSMMRGEASRAGMALASGIPRRTDDGRGYLNSVVALSDPKMPYYAKDHLVPFGEFVPLPGLIGWIYQHMDMPLSGFTRGGADQPPLTLAGQKVAFNVCYEDSFGEELIGPASRAGMLANVSNLAWFGKSEAMSQHLQLSQARSLETGRYMLRATNNGMTAIIRPDGEISAVAAPFTAQVLTGFAQSRQGLTPYMRFGNLPVVLGCGALLLLALLLGWRRRGQH", - "output": "plasma membrane ; N-acyltransferase activity ; lipoprotein biosynthetic process" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MLDFEKPLFEIKNKIESLKESQEKNDVDLQEEIDMLEASLARETEKVYTNLKPWDRVQLARLQERPTSLDYIPHIFDSFIELHGDRNYRDDPAMIGGIGYLNGQAVTVVGQQRGKDTKDNIYRNFGMAHPEGYRKALRLMKQAEKFNRPIFSFIDTKGAYPGKAAEERGQSESIARNLVEMASLTVPVISIVIGEGGSGGALGLGITNRILMLENSTYSVISPEGASALLWKDSNLAKIAAETMKITAEDLYELNIADEVIKEPLGGAHHDVETQAQSIKRTFESHLSELNQLTQEELVEDRYQKFRTIGSYTE", - "output": "acetyl-CoA carboxylase complex ; acetyl-CoA carboxylase activity ; ATP binding ; carboxyl- or carbamoyltransferase activity ; fatty acid biosynthetic process ; malonyl-CoA biosynthetic process" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MKKIGLFGGTFDPIHNGHLHIARAFADEIGLDAVVFLPTGGPYHKDAASASAADRLAMVELATAEDARFAVSDCDIVREGATYTFDTVQIFRQQFPSAQLWWLMGSDSLMKLHTWKKWQMLVRETNIAVAMRQGDSLHQTPRELHAWLGKSLQDGSVRILSAPMHNVSSTEIRRNLAGQGVSDGIPPAAARYIREHGLYEK", - "output": "ATP binding ; nicotinate-nucleotide adenylyltransferase activity ; NAD biosynthetic process" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MLILTRRVGETLMIGDEVSVTVLGVKGNQVRIGVDAPKDIAVHREEIYQRIQHERTIQSQMQHLEQGSFAPSFDDEDYFNR", - "output": "cytoplasm ; mRNA 5'-UTR binding ; mRNA catabolic process ; negative regulation of translational initiation ; positive regulation of translational initiation ; regulation of carbohydrate metabolic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MSAVPHATPSPTTIACLLGPTASGKTAAALALAARRPIEIVSVDSALVYRDMDIGTAKPSRDERASVPHHLIDIIDPADAYSAASFRADTLRLIGEIAARGRTPLLAGGTMLYYKALTQGLNDLPGADPDVRATLDAEAERDGWPALHARLAQVDPDTAARLAPNDSQRIQRALEVFMLSGQPMSVLLAAPRRTDDAAAAYRFVPVALEPSDRAVLHKRIAQRFDAMLDAGFIDEVERLRRREDLHPDLPSMRCVGYRQAWEFLDGDTDYRTMRDKGIFATRQLCKRQITWLRAMPERIVVDCIAPDSTARALDALERVLDGRTPG", - "output": "ATP binding ; tRNA dimethylallyltransferase activity ; tRNA processing" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MKPAARRRARECAVQALYSWQLSQNDIADVEYQFLAEQDVKDVDVLYFRELLSGVATNSAYLDGLMKPYLSRLLEELGQVEKAVLRIALFELSKRSDVPYKVAINEAIELAKTFGAEDSHKFVNGVLDKAAPVIRPNKK", - "output": "RNA binding ; DNA-templated transcription termination ; transcription antitermination" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MVFRRFVEVGRVAYVSFGPHAGKLVAIVDVIDQNRALVDGPCTQVRRQAMPFKCMQLTDFILKFPHSAHQKYVRQAWQKADINTKWAATRWAKKIEARERKAKMTDFDRFKVMKAKKMRNRIIKNEVKKLQKAALLKASPKKAPGTKGTAAAAAAAAAAKVPAKKITAASKKAPAQKVPAQKATGQKAAPAPKAQKGQKAPAQKAPAPKASGKKA", - "output": "cytoplasm ; cytosol ; cytosolic large ribosomal subunit ; cytosolic ribosome ; extracellular exosome ; membrane ; postsynaptic density ; cadherin binding ; RNA binding ; structural constituent of ribosome ; cytoplasmic translation ; ribosomal large subunit biogenesis ; rRNA processing ; translation" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MAQQSPYSAAMAEQRHQEWLRFVDLLKNAYQNDLHLPLLNLMLTPDEREALGTRVRIVEELLRGEMSQRELKNELGAGIATITRGSNSLKAAPVELRQWLEEVLLKSD", - "output": "cytoplasm ; DNA-binding transcription factor activity ; sequence-specific DNA binding ; negative regulation of DNA-templated transcription" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MTEPTFPRRPQAIFLMGPTASGKTVLAMALHQHLPVEIISVDSALIYRGMDIGTAKPGADELARAPHRLIDIRDPAEAYSAADFRRDALKEMAEITEAGRIPLLVGGTMLYFKALLEGLSPLPSADPEVRARIEREAETVGWQALHRQLQQIDPIAANRIHPNDPQRLLRALEVFFVSGNTLTELTKISGEALAYRVHQFAIVPLDRALLHQRIAQRFHQMLAAGFEHEVSTLFARGDLHREMPSIRCVGYRQMWSYLADETDYDDMVFRGICATRQLAKRQMTWLRGWHDVHWLDSDEPAALDRVLQVVSA", - "output": "ATP binding ; tRNA dimethylallyltransferase activity ; tRNA processing" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MERDNGTIQAPGLPPTTCVYREDFKRLLLPPVYSVVLVVGLPLNVCVIAQICASRRTLTRSAVYTLNLALADLLYACSLPLLIYNYARGDHWPFGDLACRLVRFLFYANLHGSILFLTCISFQRYLGICHPLAPWHKRGGRRAAWVVCGVVWLVVTAQCLPTAVFAATGIQRNRTVCYDLSPPILSTRYLPYGMALTVIGFLLPFTALLACYCRMARRLCRQDGPAGPVAQERRSKAARMAVVVAAVFVISFLPFHITKTAYLAVRSTPGVSCPVLETFAAAYKGTRPFASANSVLDPILFYFTQQKFRRQPHDLLQKLTAKWQRQRV", - "output": "apical plasma membrane ; basolateral plasma membrane ; plasma membrane ; G protein-coupled ADP receptor activity ; G protein-coupled UDP receptor activity ; G protein-coupled UTP receptor activity ; cellular response to organic cyclic compound ; cellular response to prostaglandin E stimulus ; cellular response to purine-containing compound ; cellular response to pyrimidine ribonucleotide ; G protein-coupled receptor signaling pathway ; phagocytosis ; positive regulation of ERK1 and ERK2 cascade ; positive regulation of inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity ; positive regulation of inositol trisphosphate biosynthetic process ; positive regulation of smooth muscle cell migration ; positive regulation of vascular associated smooth muscle cell proliferation ; transepithelial chloride transport" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MECKLVNLSNNDVGTTQLNPLIFSVEQKLSILHDIVRWQLAKRRAGTHKVKGISDVSGTTAKPYSQKRTGRARQGSLRSPQFRGGGVIFGPIVRSHAYSLNKKVRKFGLKVALSLKYLNNQVIILNNLNINVKKTSEMCKYIQNFKFSSFLIVGDYEDSLLRAARNLHYVNLIKPIGLNVFDILNHECIMLTSDALRYLEGRLL", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MKGLFIRIVLAICLSLWAIDMVFPWQQIVRSKQNYHTTIQERQKLIVGTINNPVSYFIGTNGETGLEYELSKAFANYLNVDLEMFPLNSADALFQALAQGKIDIAAASLFYQQDRSEKFKLGPAYHAASWQLTYRKGERRPITLENLSGKLVIPANSALNNILLAKKEKYPSLTWETSELSQEELLFQVAEGKIDYTIATSTEVSVNQQIKPQIAIAFNVTDEFTVHWYLSDKGSSELQAALLDFMNSAIENGLIARIEEKYFNHLNQFDYVDTRSYLNAIETVLPKYAPLFEKYKGDLDWRLLAAISYQESHWNPEATSPTGVRGMMMLTKATADRMNITNRLDPEQSIKAGSEYLHLLLKQMPDTILKEDRIWFALAAYNMGLGHLLDVRRLTKQLGGNPDNWLEVKKNLPLLAQKRYFTHLKYGYARGYEAFQYVENIRRYMNSIMNYYRLQQNQQDRQDRYENENNDVISTQTQQEQR", - "output": "cell outer membrane ; lytic transglycosylase activity ; cell wall macromolecule catabolic process ; cell wall organization ; peptidoglycan metabolic process" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MPDLPSAFLPLLLLSKFVTPVTFRHHRYDDLVRTLYKVHNQCPDITRLYNIGRSVKGRYLYVLEFSDYPGIHEPLEPEVKYVGNMHGNEVLGRELLLQLSEFLCEEFRNRNQRILRLIQDTRIHILPSMNPDGYEVAAAQGPNMSGYLVGRNNANGVDLNRNFPDLNTYFYYNSKNGGPNHHLPLPDNWKSQVEPETRAVIQWIRSLNFVLSANMHGGAVVANYPYDKSLEHRFRGPHRTSNSPTPDDELFQTLAKVYSYAHGWMHQGWNCGDYFPDGITNGASWYSLSKGMQDFNYLHTNCFEITLELSCDKFPRQEELQREWLGNREALIQFLEQVHQGIKGMVLDENSNNLTGAVISVTGINHDVTSGEHGDYFRLLLPGTYSVTAKAPGYDPKTVTVTVGPAGPTVVDFQLKRSSSQVYPVQRAPGRGQGGRAKQPRTSRKKDPATKRHRGPA", - "output": "extracellular space ; carboxypeptidase activity ; metallocarboxypeptidase activity ; zinc ion binding ; bradykinin catabolic process ; peptide metabolic process ; protein catabolic process ; protein processing ; response to glucocorticoid" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MSTPTTPPRDAWARLRALTPARIALGRAGTSLPTASHLEFQLAHAQARDAVHLAFDPAPLQAVLQQRGRRSVLLHSAASDRHLYLQRPDLGRRLSDEAAEQLRGTTAVHGGGADLAVVVADGLSALAVHRHAGAMLEQIDALAAHEGWSLAPVTLIAQGRVAIGDEVGELLQARAVIVLIGERPGLSSPDSLGLYLTYAPRVGHTDAARNCISNIRGEGLSYAEAGHKLGYLLREAFRRKLSGVQLKDEADRPLLGTDTASQAAPRNFLLPE", - "output": "ethanolamine ammonia-lyase complex ; ethanolamine degradation polyhedral organelle ; cobalamin binding ; ethanolamine ammonia-lyase activity ; amino acid metabolic process ; ethanolamine catabolic process" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MRVVFFGTPEFALPSLQILLQPQSPFEVVGLVCQPDRPQGRGQKVLPPPTKILAQAHGIPVWQPGRLRRDPEVLAALEALAADVFVVVAYGQILPPAVLQMPKLGCINVHASLLPAYRGAAPIQWAIANGETETGVTTMLMDEGMDTGAILLQAKLPIEPEQTGLELASQLAQRGAELLVETLVKLEKGELTPIPQDDSRATYAPLLKKQDFQLDWQRPAQALHNQIRAFSPDCFTGLQGQRIKIVRSAAPQLHPPPAELPPGSPGEVVGLARGEGVYVATGEGSLLIRRAQLPGRKEQSACDLVNGGQLRVGMRFEVLPDP", - "output": "methionyl-tRNA formyltransferase activity" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MDSSVPGGQRTLQKRRNAQLQKEKKANQTPASPRQAGFGGSSSSILKLYTDEANGLRVDPLVVLFLAVAFVFSVVALHVVAKVSGKIF", - "output": "Sec61 translocon complex ; intracellular protein transport" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MPQQNLLILYGSQTGTAEDLAGRLSREAKRHHFNCRTEALDEYRVANLINEHLVIFVCATTGQGDPPDNMKNFWRFIFRRNLPHNALCQMDYAVLGLGDSSYPKFNFIAKKLHKRLNQLGACPLLPAALGDDQHELGPDAVVDPWLKDLWSKVLSMFPLRPGLEIISEDVLLPPKYSLRLLEEKVGQSELSGDAYERDFISNNTTPPSEIHPFLAPVLSNERVSAHDHFQDVRLIEFNITGSAIQFYPGDVVMVQPRNSLLHVEQFCSLLHLDPLNKVVVEPSDPESPVPMHLAALCSVQQLVERYLDICSIPRRSFFQLFCHFSPDEMEREKLKEFSCAAGQEELYSYCNRPRRTILEVLVDFPHTTRCIPATFLLELIPQIRPRAFSIASSMEALPNTIQILMAVVQYKTKLIEPRRGLCSTWLASLPPHGTERVPIWVKKGSMKFPCDPDTPVVMVGPGTGVAPFRAAIQERVANGRPGNCLFFGCRGKSKDFYFEKEWEDLGNRGYLTLFTAFSRDQEDKIYVQHRIKENSKLLWDLIGTKQGYVYIAGNAKLMPNEVTDALKWVLQLEGGMSAPDAEQYLASMEKSCRFQSETWS", - "output": "cytosol ; perinuclear region of cytoplasm ; electron transfer activity ; flavin adenine dinucleotide binding ; FMN binding ; NADP binding ; NADPH-hemoprotein reductase activity ; oxidoreductase activity, acting on iron-sulfur proteins as donors, NAD or NADP as acceptor ; oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor ; cell death ; cellular response to menadione ; iron-sulfur cluster assembly" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MSAKIIDGKAIALSVRQRVAARVAERKAKGLRAPGLAVVLVGEDAASQVYVGSKRRACEEVGFISKSYDLAPTITQDELLALIDQLNADPTIDGVLVQLPLPAHLDSTQVIERILPNKDVDGFHPYNVGRLAQRIPALRPCTPKGMMTLLENTGVKIKGMHAVVVGASNIVGRPMTLELLLAGCTTTTCHRFTKGLEQFVRQADILVVAVGKAEFIPGEWIKPGAIVLDVGINRLSNGKLVGDVEYPTAAQHASFITPVPGGVGPMTVATLIENTLQACEQYHS", - "output": "methenyltetrahydrofolate cyclohydrolase activity ; methylenetetrahydrofolate dehydrogenase (NADP+) activity ; histidine biosynthetic process ; methionine biosynthetic process ; purine nucleotide biosynthetic process ; tetrahydrofolate interconversion" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MDLASLRAQQIELASSVCREDRLDKDPPAFIGGADVGFEQGGEVTRAAMVLLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALLAAWEQLSQKPDLLFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKKRLCGKFEPLSAEPGALSPLMDKGEQLAWVWRSKARCNPLFIATGHRVSTDSALAWVQRCMKGYRLPEPTRWADAVASGRPAFVRWQEIQR", - "output": "cytoplasm ; deoxyribonuclease V activity ; magnesium ion binding ; DNA repair" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MTVTVKMLVQKVKLDVVYATDNLLSKEITTSDISRPGLEMTGYFDYYAPERLQLFGMKEWSYLTQMTSHNRYSVLKEMFKKDTPAVVVSRNLAIPKEMVQAAKEEGISLLSSRVSTSRLAGEMSYFLDASLAERTSVHGVLMDIYGMGVLIQGDSGIGKSETGLELVKRGHRLVADDRVDVYAKDEETLWGEPAEILRHLLEIRGVGIIDVMSLYGASAVKDSSQVQLAIYLENFEAGKVFDRLGNGNEEITFSGVRIPRIRIPVKTGRNVSVVIEAAAMNHRAKEMGFDATKTFEDRLTQLITKNEVSQ", - "output": "ATP binding ; magnesium ion binding ; phosphorelay sensor kinase activity ; protein serine/threonine kinase activity ; protein serine/threonine/tyrosine kinase activity ; carbohydrate metabolic process ; regulation of carbohydrate metabolic process" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MPKPIFISFEGPEGAGKTSVLEALISELKTKLGDDLVTTREPGGNPISEAIRSILQPEEDNGMDKRTEALLYTAARRQHLVENIKPALDQNKIVISDRYVDSSLAYQGGGRGLGIDNIWEINQFAIDGLLPDMTIYLDVPVEIGLARVNENRQGKIDRLDKESISFHQKVRETYLKLQSEFSDRIKIVDATQPLNKVIDDTRILINQILEDKS", - "output": "ATP binding ; thymidylate kinase activity ; dTDP biosynthetic process ; dTTP biosynthetic process ; phosphorylation" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MLDNTRLRIAIQKSGRLSDDSRELLARCGIKINLHTQRLIAMAENMPIDILRVRDDDIPGLVMDGVVDLGIIGENVLEEELLNRRAQGEDPRYLTLRRLDFGGCRLSLATPVDEAWDGPAALDGKRIATSYPHLLKRYLDQKGVSFKSCLLNGSVEVAPRAGLADAICDLVSTGATLEANGLREVEVIYRSKACLIQRDGEMAQSKQELIDKLLTRIQGVIQARESKYIMMHAPSERLEEVIALLPGAERPTILPLAGEQQRVAMHMVSSETLFWETMEKLKALGASSILVLPIEKMME", - "output": "cytoplasm ; ATP binding ; ATP phosphoribosyltransferase activity ; magnesium ion binding ; histidine biosynthetic process" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MTNGKYAARKLKKDRQQRRWSDSEYARRERGLGKKSDPLEGAPQGRGIVLEKVGIEAKQPNSAIRKCVRVQLIKNGKQVTAFCPGDGAISFIDEHDEVTIAGIGGAKGRAMGDLSGVNYKVEKVNGVSLIELVRGNAEKPVR", - "output": "small ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MEYRSLTLDDFLSRFQLLRPQINRETLNHRQAAVLIPIVRRPQPGLLLTQRSIHLRKHAGQVAFPGGAVDDTDTSVIAAALREAEEEVAIPPSAVEVIGVLPPVDSVTGYQVTPVVGIIPPDLPYRASEDEVSAVFEMPLAQALHLGRYHPLDIYRRGDSHRVWLSWYEQYFVWGMTAGIIRELALQIGVKP", - "output": "CoA pyrophosphatase activity ; magnesium ion binding ; manganese ion binding ; nucleoside diphosphate metabolic process" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MQSWYCPPVPVLPGRGPQLRLYDSADRQVRPVAPGSKATMYVCGITPYDATHLGHAATYVTFDLIHRLWLDLGHELHYVQNITDIDDPLFERADRDGVDWRDLAQAEVALFCEDMAALRVLPPQDYVGATEAIAEMVELIEKMLACGAAYVIDREMGEYQDIYFRADATLQFGYESGYDRDTMLRLCEERGGDPRRPGKSDELDALLWRAARPGEPSWPSPFGPGRPGWHVECAAIALSRIGSGLDIQGGGSDLIFPHHEFTAAHAECVSGERRFARHYVHAGMIGWDGHKMSKSRGNLVLVSALRAQDVEPSAVRLGLLAGHYRADRFWSQQVLDEATARLHRWRTATALPAGPAAVDVVARVRRYLADDLDTPKAIAALDGWVTDAVEYGGHDAGAPKLVATAIDALLGVDL", - "output": "ATP binding ; cysteine-glucosaminylinositol ligase activity ; zinc ion binding ; mycothiol biosynthetic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MVRKKIALIGSGMIGGTLAHIIGLKELGDVVLFDISEGMPQGKALDIAESSPIDGFDVHLKGANAYEAIEGADVVIVTAGVARKPGMSRDDLLGINLKVMEQVGAGIKKYAPSAFVICITNPLDAMVWALQKFSGLPVHKVVGMAGILDSARFRYFLSEEFKVSVKDVTAFVLGGHGDSMVPLVRYSTVGGISLPDLVKMGWTTQERIDQIIQRTRDGGAEVISLLKTGSAYYAPAASAVSMAEAYLKGTKRVVPVAAYLSGEYGVNDTYVGVPVVLGSGGVERVIEIDLDKEERDAFDYSVNAVKKLCEACIALVPSLK", - "output": "L-malate dehydrogenase activity ; carboxylic acid metabolic process ; tricarboxylic acid cycle" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MANSAQAKKRARQNVKARKHNASLRSMVRTYIKRTLSAIAGGDYAVATEAYKKAVPVIDRMADKGIIHKNKAARHKSRLNAQVKALAN", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "METIDKIKQQINENPILLYMKGSPKFPSCGFSARAVEAIIQCQVPFGYVDILTNPDIRSELPKFANWPTFPQLWVEGELIGGCDIILEMFQKGELHTLLKETATKHG", - "output": "cytoplasm ; 2 iron, 2 sulfur cluster binding ; disulfide oxidoreductase activity ; metal ion binding" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MDYRPSDSSGTDDDLPPSHQGRYQRNARPTGNGRPSVLNSAPLSRVHNEMETQIHLIEQEAYSSILRAFKAQSDAITWEKESLITELRKELRVSDEEHRELLSRVNADEMIRRIREWRKANSLQSSVPQLVHDAPSPAVSGSRKKQKTSQSIASLAMGPPSPSLHPSMQPSSSALRRGGPPPGPKTKKPKTSMQYPSTGIAGRPQAGALTNEPGESGSYDPLVGRKVWTKWPDDNQYYEAVITDYNPVEGRHALVYDINSANETWEWVNLKEISPGDIRWEGEDPGISRKGGHPGQGRGTKTMARGGPASNAGGRGRGSMRMQQPKTQNGIGKKALGEIEILHTETLLKEVEKVFGSVNPNPAEVEKAKRVLRDHELALMDAIAKLEEISDGESGNI", - "output": "nucleus ; chromatin binding ; nucleosome binding ; defense response to fungus ; regulation of transcription by RNA polymerase II" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MRETSVHIVSLGCPKNLIDSEVMAALLEQAGCRIVSGPEEADILLLNTCAFILPAREESIDEIFRLAEWKKAGKCRHLIVTGCLPQRYGAELAAELPEVDLFLGISEVPNIADHLRVLMEGKHSEKNRVIVTNPLFLMDAGHPRLLSTPPYSAYLKIAEGCSNRCSYCIIPRLRGKARSRPIEDILREAEDLVDRGVRELILVAQDTTAYGRDLEGKPTLALLLRELAGLNTLAWIRILYTYPTGLTDELLNVIANQDRICSYLDVPIQHIDDDILAAMKRRGDSHLIRNSLERARAVIPDLALRTSLITGFPGETPAKFHRLIAFVQETRFDHLGVFPYSPEEGTPAEKLPRQVSQRTKETRRNLLMEEQAVISHEINQTLVGSLQEVLIEGPSSSPDYPMIGRCRRQAPDIDGLTYVKGGKQPFLPGSLVQCRIVAADDYDLFAEVISSPD", - "output": "cytoplasm ; 4 iron, 4 sulfur cluster binding ; metal ion binding ; protein methylthiotransferase activity ; peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid ; tRNA modification" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MIITLARVDDRLIHGQVTTVWSKESNADRIIIVSSEVYKDDIRKTLLKQAAPPGMKVNIVDVPKAIAVYNNPKYQNEKVFYLFTNPREVVDLVKGGIPLEKLNIGGMQFKQGKTQISKAVSLDADDVAAFRELHQLGVKLDLRVVKTDPSSDILAKIDEVFGKE", - "output": "cytoplasm ; kinase activity ; protein-N(PI)-phosphohistidine-sorbose phosphotransferase system transporter activity ; phosphoenolpyruvate-dependent sugar phosphotransferase system ; phosphorylation" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MSIITDVYAREVLDSRGNPTLEVEVYTESGAFGRGMVPSGASTGEHEAVELRDGDKSRYGGLGTQKAVDNVNNVIAEAIIGYDVRDQQAIDRAMIALDGTPNKGKLGANAILGVSIAVARAAADYLEVPLYSYLGGFNTKVLPTPMMNIINGGSHSDAPIAFQEFMIMPVGAPTFKEALRWGAEVFHALKKILKERGLETAVGDEGGFAPKFEGTEDGVETILKAIEAAGYEAGENGIMIGFDCASSEFYDAERKVYDYSKFEGEGGAVRTAAEQIDYLEELVNKYPIITIEDGMDENDWDGWKALTERLGGRVQLVGDDFFVTNTDYLARGIKEEAANSILIKVNQIGTLTETFEAIEMAKEAGYTAVVSHRSGETEDSTIADIAVATNAGQIKTGSLSRTDRIAKYNQLLRIEDQLGEVAQYKGIKSFYNLKK", - "output": "cell surface ; extracellular region ; peptidoglycan-based cell wall ; phosphopyruvate hydratase complex ; magnesium ion binding ; phosphopyruvate hydratase activity ; glycolytic process" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MASNLPLQLPAGVSDLLPPEAAALRQLEQRLLNCFRSWGYQEVMTPTFEFATTFQAGSPAGEEGALYKFIDRQGRVLALRPEMTAPIARLVATSLRRRELPLRLGYSARVFRYEEPQAGRRREFHQAGVELIGAGGVAGDVEIIALAVESLAQAGLEDFRLGLGQVAVTKGVLQDLALPPEAVAGIKSALASKDLVALERIYDEYHLEGERRRRLELLATIHGGREALEEARACFGRTAAAASLAELSRVWEALGAAGLEKWLFIDLGILRDFDYYTGIVFEGYVPGLGAPVCGGGRYDGLLAQFGYPCPATGFALGLERLLLARGETAPASLAGGYLVAGRDLAALLKRARELRSKGTAVVLDGESRSRQEAAARAAARGLNLEWIGE", - "output": "cytoplasm ; transferase activity ; histidine biosynthetic process" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MITKQSSNVLRKKRHLRLRKIVSGTSQRPRLNVFRSNKFLYVQIIDDTQQTTLCSANSKESNVLGSNIKAAEAVGALIAKKALAQGIKNVVFDRSGYLYHGKIKALADACRKSGLQF", - "output": "cytoplasm ; ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MEVSNSCSSFSSSSVDSTKPSPSESSVNLSLSLTFPSTSPQREARQDWPPIKSRLRDTLKGRRLLRRGDDTSLFVKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSIICGNRDRKHHVLTYEDKDGDWMMVGDIPWDMFLETVRRLKITRPERY", - "output": "nucleus ; DNA-binding transcription factor activity ; identical protein binding ; transcription cis-regulatory region binding ; auxin-activated signaling pathway ; gravitropism ; response to auxin ; root development ; shoot system development" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MSADGRSGRLRFTKMHGAGNDFVVLDLRDGTPPPDAALAAQLADRHFGVGCDQILTIEAPRSEGAVAAYGIWNSDGSAARQCGNGARCVAAWLVRDGTAQGERFIIDSPMSAHAVERLDGDRYAVAMGVPQFEPAQIPLAGFAHARDEYALPVHGETVRFGAVSMGNPHAVVEVGRVDAAPVERVGALLQQNAAFPDSVNVGFVQVVDPAHVRLRVFERGVGETLACGSGACAAAVVLMQRGRVERDVQVSLPGGELRIRWPGDQEQVVMSGPAVFVFDGEWNR", - "output": "cytoplasm ; diaminopimelate epimerase activity ; lysine biosynthetic process via diaminopimelate" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MIDITLPLTDIHRHLDGNIRAQTILDLGRQFNIALPAQTLETLIPHVQVTSTEPDLVSFLTKLDWGVKVLASLDACRRVAFENIEDAARNGLHYVELRFSPGYMAMAHQLPIAGVVEAVIDGVRDGCNTFGVEARLIGIMSRTFGEAACLQELDALLAHREKITALDLAGDELGFPGSLFLSHFNRARDAGWHITVHAGEAAGPESIWQAIRELGAERIGHGVKAVEDRALMDFLAQQRIGIESCLTSNIQTSTVASLADHPLKTFLEHGVLASLNTDDPAVQGVDIIHEYHVAAPAAGLSREQIRQAQINGLEIAFLSDDEKRALREKVAAA", - "output": "2'-deoxyadenosine deaminase activity ; adenosine deaminase activity ; zinc ion binding ; nucleotide metabolic process ; purine ribonucleoside monophosphate biosynthetic process" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MAALRVQPEAQAKVDVFREDLCTKTENLLGSYFPKKISELDAFLKEPALNEANLSNLKAPLDIPVPDPVKEKEKEERKKQQEKEDKDEKKKGEDEDKGPPCGPVNCNEKIVVLLQRLKPEIKDVIEQLNLVTTWLQLQIPRIEDGNNFGVAVQEKVFELMTALHTKLEGFHTQISKYFSERGDAVAKAAKQPHVGDYRQLVHELDEAEYRDIRLMVMEIRNAYAVLYDIILKNFEKLKKPRGETKGMIY", - "output": "cytoplasm ; nucleoplasm ; proteasome activator complex ; endopeptidase activator activity ; positive regulation of endopeptidase activity ; regulation of G1/S transition of mitotic cell cycle ; regulation of proteasomal protein catabolic process" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MTRFQRVAVLGSTGSIGDSTLDVIARHPDRLGVYALSAYSRMDKLAAQAAACGAAVVVVPDDAAAARFRAAWRGKAAMPEVRVGPRALAETAAAPECTTVMAAIVGAAGLPAALAAAQAGKRVLLANKEALVAAGSLFMAAVRENGAELLPIDSEHNAIFQCMPQGARAAAPTAPAPGVRRLLLTASGGPFRRQDPADLHEVTPAQACAHPNWSMGRKISVDSATMLNKGLEVIEAHWLFAMPSERIDVLIHPQSVVHSMVEYDDGSVLAQLGQPDMRTPIAYGLGFPERLASGVGLLDLTRWGRLDFEQPDLQRFPCLALSFAALRAGQPACVALNAANEVAVAAFLEGRLRYTWIARVIEAVLEWQAKQASVTLTSLDDVLDLDARARSFAGNLGLA", - "output": "1-deoxy-D-xylulose-5-phosphate reductoisomerase activity ; metal ion binding ; NADPH binding ; isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway ; terpenoid biosynthetic process" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MSTAALLTLVRSGGNQVRRRVLLRARGLQDDRWVMPTCHSSTSEPKWSRFDPDGSGRPATWDNFGIWDNRLEEPILLPPSIKYGKPIPKVSLQNVGSASQIGKRKENEDRFGFAQLTNEVLYFAVYDGHGGPAAADFCHTHMEKCILDLLPKEENLETVLTLAFLEIDKTFARHAHLSADATLLTSGTTATVALLRDGIELVIASVGDSRAILCRKGKPMKLTIDHTPERKDEKERIKKCGGFVAWNSLGQPHVNGRLAMTRSLGDLDLKTSGVIAEPETKRIKLHHADDSFLVLTTDGINFMVNSQEICDFVNQCHDPNEAAHAVTEQAIQYGTEDNTTAVVVPFGAWGKYKNSEITFSFSRSFASSGRWA", - "output": "mitochondrial matrix ; metal ion binding ; myosin phosphatase activity ; protein serine/threonine phosphatase activity ; peptidyl-threonine dephosphorylation" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MDKKQARLRRARKTRARIAELKMARLSVHRTNCHIYAQIIDETGSRVLAQASTLEAEVKKELANGGNAGAAALIGKRIAEKAKAAGVEKVAFDRSGFQYHGRIKALADAARENGLAF", - "output": "cytoplasm ; ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MIAGSMVALVTPMDAQGRLDWDSLSKLVDFHLQEGTNAIVAVGTTGESATLDVSEHIEVIRRVVAQVAGRIPVIAGTGANSTREAVELTTNAKTAGADACLLVTPYYNKPTQEGLFQHFSHIANAVDIPQILYNVPGRTACDMLPETVARLSTVKNIIGIKEATGNLQRAKDILASVSSDFLVYSGDDATAVELMLLGGKGNISVTANVAPRLMSDLCAAAMRGDAETARAIHEKLMPLNNTLFIESNPIPVKWALHEMGKMPAGIRLPLTWLSEACHEPLRQALRQSGVLV", - "output": "cytoplasm ; 4-hydroxy-tetrahydrodipicolinate synthase activity ; diaminopimelate biosynthetic process ; lysine biosynthetic process via diaminopimelate" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MSEKLLYEALNEGIHEEIERDPKVFVIGEDIGHYGGSYKVTKGLFEKYGNLRILDTPIAENSFTGIAIGAAMTGLRPIIEGMNMGFLLLAFNQIANNAGMLHYTSGGNFTTPLVVRGPGGVGRQLGAEHSQRLESYFQSVPGLQMVACSTPYNAKGLIKSAIRSQNPIIFFEHVLLYNIKENIPQKEYLVPLEKAELVRSGNQITILTYSRMRYHVLQAAKTLIEKGYDPEIIDIISLKPLDMGTISTSLRKTHKVLIVEECMKTGGIGTTLKSAILESLFDFLDTPIMSLSSQDVPTPYNGFLEDLTVIQPSQIVEAAEKIILYS", - "output": "chloroplast ; pyruvate dehydrogenase (acetyl-transferring) activity ; acetyl-CoA biosynthetic process from pyruvate ; glycolytic process" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MCRRPDCGFSFSPGPVILLWCCLLLSIVSSAAVNVAPTAAEKVPAECPELTRRCLLGEVFQGDEYESWLRPLVNVTGRDGPLSQLIRYRPVTPEAANSVLLDEAFLDTLALLYNNPDQLRALLTLLSSDTAPRWMTVMRGYSECGDGSPAVYTCVDDLCRGYDLTRLSYGRSIFTEHVLGFELVPPSLFNVVVAIRNEATRTNRAVRLPVSTAAAPEGITLFYGLYNAVKEFCLRHQLDPPLLRHLDKYYAGLPPELKQTRVNLPAHSRYGPQAVDAR", - "output": "host cell Golgi apparatus ; host cell plasma membrane ; membrane ; viral envelope ; virion membrane ; entry receptor-mediated virion attachment to host cell ; fusion of virus membrane with host plasma membrane ; viral entry into host cell" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYEGDNVLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSLRSGTYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEDGYEYEDEEEVGEEDA", - "output": "cytoplasm ; microtubule ; GTP binding ; GTPase activity ; metal ion binding ; structural constituent of cytoskeleton ; microtubule-based process" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MSQLTHINAAGEAHMVDVSAKAETVREARAEAFVTMRSETLAMIIDGRHHKGDVFATARIAGIQAAKRTWDLIPLCHPLMLSKVEVNLQAEPEHNRVRIETLCRLTGKTGVEMEALTAASVAALTIYDMCKAVQKDMVIGPVRLLAKSGGKSGDFKVEADD", - "output": "cyclic pyranopterin monophosphate synthase activity ; Mo-molybdopterin cofactor biosynthetic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MSAFEKPQIISHIQKSLSYTVFDCKWMPCSAKFVTMGNFARGTGVIQLYEIQQGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFAGNLHIWNLEAPEVPVYSVKGHKEIINTIDGVGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMSLRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNREVFLTAGGAGSLHLWKYEYPIQRSKKDSEGVEMGVAGSVSLLQNVTLSTQPVSSLDWSPDKRGLCICSSFDQMVRVLIVTKLHKI", - "output": "dynein axonemal particle ; RPAP3/R2TP/prefoldin-like complex ; ubiquitin binding ; apoptotic process ; axonemal dynein complex assembly" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MISINMTIENAEWGDEKILYTITEKALIATIDRLSLTQVTSELSLLFTNNMRMAQINTQWRNKNKPTNVLSFPAFPLKAGQNPGPMLGDIVLARETIVYEAEEEGKSFHDHLTHMIVHGILHLLGYDHETDDEAYQMEELEKEILQKIAIKNPYTELL", - "output": "cytoplasm ; metalloendopeptidase activity ; RNA endonuclease activity ; zinc ion binding ; rRNA processing" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MDAYELVTRNTAEIVTEDELRALLNKPTKRVYTGYEPSGEIHLGHLVTINKLMDMKAAGFDVVVLIANLHAYLNRKGTFEQIKELADYNKACIEAVGLKGAEFVLGTDVQLTPKYQTEVLTLCQQITLNRATRSMDEVGRAMDNPMVSQMVYPVMQVVDIPTLNVDAAVGGIDQRKIHMLAREHLPTLGYKPPVCIHTPIVNGLDGEKMSSSKGNVVSVADSPEEIKKKMKKAFCPPETEGNPILQIFRYNVFPRMDTIAIRRPEKFGGDLEFHSYAELEAAYAGGKIHPMDLKAACGDALTELLADAYAYVQSYKN", - "output": "cytoplasm ; ATP binding ; tyrosine-tRNA ligase activity ; tyrosyl-tRNA aminoacylation" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MFKFNEEKGQLKCSFCGKTQDQVRKLVAGPGVYICDECIELCTEIVEEELGSEEEVEFKDVPKPKEIREILDEYVIGQDQAKKSLAVAVYNHYKRINSNSKVDDVELSKSNISMIGPTGSGKTLLAQTLARILNVPFAIADATSLTEAGYVGEDVENILLKLIQAADYDVEKAEKGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQGGRKHPHQEFIQIDTTNILFICGGAFDGIEQIIKRRLGQKVIGFGSDNKHEDLEKEALLSKVLPEDLLRFGLIPEFIGRLPIIASLEPLDEKALVEILTKPKNALVKQYRKMLELDDVELVFEDEALTEIAKKAIERKTGARGLRSIIEGIMLDVMFDLPSREDIEKCVITGKTVTDGEPPRLIMKDGTVVNKDKKTSA", - "output": "ATP binding ; ATP hydrolysis activity ; ATP-dependent protein folding chaperone ; protein dimerization activity ; unfolded protein binding ; zinc ion binding" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MLHSSIYWKNLINTFESGCFSIAEVKFIFSNIHIYKNICNPYKNYQLPELARNLQSSKKLDNAILKQDKKNIIDILSPISGIFYSSSKPGASPFVAVGSVVSKGQTLCIIEAMKTMNEIESDSIGKIHQICARNGDFVTKNQVLMKIILEQS", - "output": "acetyl-CoA carboxylase complex ; chloroplast ; acetyl-CoA carboxylase activity ; fatty acid biosynthetic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MRKPCYAVYHPALRLKCLVRKGLGKIKGDTDMCDKQQLKKKEKEKQRAQKVACGPRDPPCTFSRSYTDQKRKEIHLGSTEWGLKESFTLTRGPNRRGNVGKGVKRPMVNKKLGQLELTSLDLRWQKEGKGN", - "output": "mitochondrion ; nucleus ; meiotic cell cycle" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MTEAKPVRVAVVYGGRSSEHSVSCISAGAIMEHLDPEKYEVVPIGITREGTWTQGNRAGLNIVDGRLPEVELHDELALSLNPATRGRIHNVTRHEHYTEVDVIVPVLHGPYGEDGTVQGLFELSGIPYVGAGVLASAVGMDKEFTKKLLVAEGLPVAPQEVLTGEATLDDLQKERLGLPVFVKPARGGSSIGVSKVSAWEDLEAALTLAYESDDKVLIEPEISGAEVEVGVLERPDGSLQASVPAKILGTTESEEGFYDFDAKYIDEGVSAAIPAPLSEELTAELRQRAIEAFRALGASGLSRVDFFVSDYSYCINEVNTFPGFTPISMYPQVFAAVGVGYAELLDTLIQTALARS", - "output": "cytoplasm ; ATP binding ; D-alanine-D-alanine ligase activity ; metal ion binding ; cell wall organization ; peptidoglycan biosynthetic process ; regulation of cell shape" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "FNALGLSTRDLVALSGAHTIGQAR", - "output": "extracellular region ; heme binding ; lactoperoxidase activity ; metal ion binding ; hydrogen peroxide catabolic process ; response to oxidative stress" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MRKPVRIGVLGCASFAWRRMLPAMCDVAETEVVAVASRDPAKAERFAARFECEAVLGYQRLLERPDIDAVYVPLPPGMHAEWIGKALEADKHVLAEKPLTTTASDTARLVGLARRKNLLLRENYLFLHHGRHDVVRDLLQSGEIGELREFTAVFGIPPLPDTDIRYRTELGGGALLDIGVYPARAARHFLLGPLTVLGASSHEAQESGVDLSGSVLLQSEGGTVAHLGYGFVHHYRSAYELWGSRGRIVVDRAFTPPAEWQAVIRIERKGVVDELSLPAEDQVRKAVTAFARDIRAGTGVDDPAVAGDSGESMIQQAALVEAIGQARRCGST", - "output": "nucleotide binding ; oxidoreductase activity" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MARVKRAKNARKNHKKVLKLAKGYYGGKSKLFKTANESVIRALRNSYVGRKNKKRDYRRLWIARINAATRINGLSYSKFMNGIKLAGIDINRKMLSEIAINDAKAFADLVEVAKKQLNA", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; ribosomal large subunit assembly ; translation" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MKTFTPKPADLTHDWYVIDATDVVLGRLATQAAILLRGKNKPTYAPHADSGNHVIIINADKIALTGNKMGKELYSHSGRPGGLRRDSYAELLEKNPERIIKNAVKGMLPKNRLAKVQLDRLRIFRGAEHPHTPQKPQVFEIAQVSQQAK", - "output": "ribonucleoprotein complex ; ribosome ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MPKTMHFLFRFIVFFYLWGLFTAQRQKKEERTEEVKIEVLHRPENCSKTSKKGDLLNAHYDGYLAKDGSKFYCSRTQNEGHPKWFVLGVGQVIKGLDIAMTDMCPGEKRKVVIPPSFAYGKEGYAEGKIPPDATLIFEIELYAVTKGPRSTETFKQIDMDSDRQLSKAEINLYLQREFEKDEKPRDKSYQDAVLEDIFKKNDHDGDGFISPKEYNVYQHDEL", - "output": "endoplasmic reticulum lumen ; calcium ion binding ; peptidyl-prolyl cis-trans isomerase activity" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MYEGVQVSSKLEQLQGLLAPVVVALGYQCWGIDFSSQGKHSVLRIYIDKEGGVLVDDCAIVSRQISGVLDVEDPISTEYTLEVSSPGMERPLFTIEQFALYAGEQVRIKLRSPFEGRRNFQGLLRGVEEQDVVVQVEDHEFLLPIDLIDKANIIPTFD", - "output": "cytoplasm ; ribosomal small subunit biogenesis" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "METNLLLVKCVLLASCLIHPRACSPSCNFPAIFNFGDSNSDTGGLSASFGQAPYPNGQTFFHSPSGRFSDGRLIIDFIAEELGLPYLNAFLDSIGSNFSHGANFATAGSTVRPPNATIAQSGVSPISLDVQLVQFSDFITRSQLIRNRGGVFKKLLPKKEYFSQALYTFDIGQNDLTAGLKLNMTSDQIKAYIPDVHDQLSNVIRKVYSKGGRRFWIHNTAPLGCLPYVLDRFPVPASQIDNHGCAIPRNEIARYYNSELKRRVIELRKELSEAAFTYVDIYSIKLTLITQAKKLGFRYPLVACCGHGGKYNFNKLIKCGAKVMIKGKEIVLAKSCNDVSFRVSWDGIHFTETTNSWIFQQINDGAFSDPPLPVKSACTR", - "output": "extracellular region ; lipase activity ; lipid catabolic process" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MKRILIVTGQSGSGKSSALQVLEDLGYYCIDNLPLALLPEIVAKLDHENNLEQLALGVDVRSTRADMQEFDLVFEQLQKHGTVDVIYLTTQDQELIARFSASRRPHPLASRFKSLNECIQEEKQLLLPIQFRSTVHIDTTDKSVHDLKHTLLSKLGQSDKLILILQSFGYKHGIPLDADYVFDVRHLPNPHWDLELRRFSGLDEPVRRFLESSDQTNEMFDDIFHFLDKWLPVFAEGHRHYMTVSIGCTGGQHRSVYIVDRLKKALEAKWSIQVLHREMKHWS", - "output": "ATP binding ; GTP binding" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWDGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY", - "output": "chloroplast thylakoid membrane ; photosystem I ; 4 iron, 4 sulfur cluster binding ; electron transfer activity ; metal ion binding ; photosynthetic electron transport in photosystem I" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "WIMGHMVNKIEQINEFLDLGANSIEVDITFDNLGYAEYTYHGFPCDCKRWCTNQENVKEYLNALSDITTPGNPKFRKELTLVVFDLKTGGIDANRMYEGGKDFAGKILFDYWKGSENAGRAYIIISVPSIDHYKFMKGFRERFDGSAFKDLLLEKDGWDFSGNDDLDATRTAYQNAGIEALNHIWQSDGITNCIPRGLGRVNKAVSNRDSPDAFINKVYVWTVEKYSSVKDALNADVDGIMTNHPNVINGVLKEDEFKDRFKLATYGDNPWTKFKR", - "output": "extracellular region ; lyase activity ; metal ion binding ; phosphoric diester hydrolase activity ; toxin activity ; killing of cells of another organism ; lipid catabolic process" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MYAIIETGGKQLKVEEGQEIYIEKLDANEGDTVTFDKVLFVGGETVKIGNPTVEGATVTARVQKHGRQKKIIVFKYKAKKNYRRKQGHRQPYTKVVIEKINA", - "output": "cytoplasm ; ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MAVPNRVEAKQMRDHPHRIHEFRLANLVTDPFAISSLSLALIAWIIAFAGSVVAASNSKKYPAFSWWGIVYQILLMVLVLILYCYDLIDYYKSFLSGALAVAFVYTTNSAAEMLYQDGSRMGAASAGVILLSMINIIWMFYFGSDNASPSNRWIDSYSLRGIRHSVLESSIAMSSRPPLVSRNVSKYSASPQMDLYNATPAPHSQGFYPDTHSQHYVSSTALNGFENAGPPTAPALHGNMGHGNNTSTFVTDTTNGNTETTMGDTLGLYSDAGDELTSFPYVAKALYTYTADSNDAYEVSFEQGEMLRVGDIEGRWWKAKRANGETGIIPSNYVELVGENSI", - "output": "plasma membrane" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MIGRIAGTLLEKNPPHILVDCNGVGYEVDVPMSTFYNLPHTGEKVVLLTQLIVREDAHLLYGFLTPPERSTFRELLKITGVGARMALAVLSGMSVAELSQAVTLQDAARLTRVPGIGKKTAERLLLELKGKLGADLGPLAGAASPSDHATDILNALVALGYSEKEALAAIKNVPAGTGVSEGIKLSLKALSKA", - "output": "cytoplasm ; Holliday junction helicase complex ; ATP binding ; DNA binding ; four-way junction helicase activity ; DNA recombination ; DNA repair ; SOS response" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MLLVDVATASVDVGAMSSRLAKTARIADLLSRAGTEQDARLVAVTVAWLSGELPQRQIGVGWAALRSLPAPAAAPTLTVTAVDAVFSEIGAVAGKGSQARRAGLIAELFAAATDVEQTFLRRLLTGELRQGALIGVMADAVAKAADVPAARVRRAAMLAGDLPAVAAAVLAGGDAALARFTLQVGRPVGPMLAQTATGVADALDRLGGTAVFEAKLDGARVQIHRRGSDVSVYTRSLDDVTARLPEVVEAALALPVTDLIADAEAIALRPDGRPHRFQVTASRFGRAAARATQPLSVFMFDLLHVDGADLLDQPTSDRVRVLDDLVPAAHRVDRLVTDDGAAAQRFLEATLAAGHEGVMAKSPNAPYEAGRRGAGWLKVKPVHTLDLVVLAVEWGSGRRTGKLSNIHLGARDPATGGFVMLGKTFKGMTDAMLDWQTARFLELADPAAQPATSGRDPTDGHTVKVRPEQVVEIAFDGVQGSTRYPGGMALRFARVLRYRDDKSPAEADTVDTVRAFYEHG", - "output": "ATP binding ; DNA binding ; DNA ligase (ATP) activity ; metal ion binding ; cell cycle ; cell division ; DNA biosynthetic process ; DNA recombination ; DNA repair ; DNA replication" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MAVKVAINGFGRIGRLAFRRIQEVEGLEVVAVNDLTDDDMLAHLLKYDTMQGRFTGEVEVVDGGFRVNGKEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPATGDLKTIVFNTNHQELDGSETVVSGASCTTNSLAPVAKVLNDDFGLVEGLMTTIHAYTGDQNTQDAPHRKGDKRRARAAAENIIPNSTGAAKAIGKVIPEIDGKLDGGAQRVPVATGSLTELTVVLEKQDVTVEQVNEAMKNASNESFGYTEDEIVSSDVVGMTYGSLFDATQTRVMSVGDRQLVKVAAWYDNEMSYTAQLVRTLAYLAELSK", - "output": "cytoplasm ; glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity ; NAD binding ; NADP binding ; glucose metabolic process ; glycolytic process" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MATETERVGAKGGMEHSFGFTRVDETQKQSMVDSVFHSVAENYDKMNDILSLGLHRVWKNSMVAWLSPPALSHWKVLDVAGGTGDIAFRILKASRQKAHATVLDINGSMLSVGKQRAQKNGLAPLIDFVEANAEHLPFEDQSFDAYTIAFGIRNVPHIDQALREAFRVLKPGGRFLCLEFSNVEMPWLDKIYDLWSFHAIPKLGQFIANDGDAYRYLVESIRKFPKQNDFAHMIKQAGFSRVSYRNLTGAIAALHSGWKI", - "output": "2-octaprenyl-6-methoxy-1,4-benzoquinone methylase activity ; demethylmenaquinone methyltransferase activity ; S-adenosylmethionine:2-demethylmenaquinol methyltransferase activity ; S-adenosylmethionine:2-demethylmenaquinol-7 methyltransferase activity ; S-adenosylmethionine:2-demethylquinol-8 methyltransferase activity ; aerobic respiration ; menaquinone biosynthetic process ; methylation ; ubiquinone biosynthetic process" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MSKVLIVAKGMGLKSTPSKLNLVADLIRGKDVSVAMMYLKFCRKKSAGYISKVLKSAVANAQANYNIDLDNLYVKEVLVGKSFSLRRIHARARGKACRVYKHYGNVIIKLFERI", - "output": "large ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MKGYLVAIFLSSIFLYYVLYCILWGTNGYWFPAEEMRTRNNVNNCFKKPAFANLLRFPQLYPFLCRADFIKVAAMSGTNNFPLPYGIKTFETYFSSALSKLQSCDLFDEFDRVPCKRCVVVGNGGVLKNKTLGATIDSYDVIIRMNNGPVLGHEEEVGTRTTFRLFYPESVFSDSSHYDPNTTAVLVVFKPQDLRWLVEILLGKKINTQGFWKTPALKLIYKQYQIRILDPYITSEAAFQMLRFPRVFPKDQKPKHPTTGIIAITMAFHICSEVHLAGFKYNFYSPNSPLHYYGNATMSLMKQNAYHNLTAEQLFLNDIIKKKMVINLT", - "output": "Golgi membrane ; beta-galactoside alpha-2,3-sialyltransferase activity ; sialyltransferase activity ; cellular response to interleukin-6 ; glycolipid biosynthetic process ; glycolipid metabolic process ; oligosaccharide metabolic process ; protein glycosylation ; protein modification process" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MKNFNLLAVSSILLVDLFRTHWGHNVDFSKAINLNGVSFSNVDASSLGAAQVRQSASRGRGLGENPKEEDGADKKKKKDEKQVEPKKPRENKLKQPVENADGNAGGNAGGNAGGNAGGNAGGNADGNAGGNAGGNAGGNAGGNAGGNADGNAGGNADGNAGGNADGNAGGNAGGNAGGNADGNAGGNAGGNAGGNAGGNAGGNAGGNAGGNADGNAGGNAGGNAGGNADGNAGGNAGGNAGGNAGGNAGGTAGGNADGNAGGNAGGNAGGNAGGNAGGNAGGNAGGNAGGNAGGNAGGNAGGNAGGNAGANAGNKKAGDAGAGQGQNNEAANMPNVKLVKEYLDKIRSTISTEWSPCSVTCGKGVRMRKKVSAANKKPEELDVNDLETEVCTMDKCAGIFNVVSNSLRLVILLVLALFN", - "output": "cell surface ; cytoplasm ; plasma membrane" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MKPIKIALIGAGNVGNSFLYAAMNQGLASEYGIIDINPDFADGNAFDFEDASASLPFPISVSRYEYKDLKDADFIVITAGRPQKPGETRLELVADNIRIIREIALKVKESGFSGISIIVANPVDIITRAYRDASGFSDQKVIGSGTVLDTARLQFAIAKRAKVSPNSVQAYVMGEHGDSSFVAYSNIKIAGECFCAYSKLTGIDSSNYEKELEYPVSRRAYEIINRKRATFYGIGAAIAKIVSNIIKDTKNIMIAGANLRGEYGFHGVNIGVPVVLGANGIEKIIEISLNDKEKEKFAKSVAIIDKIYQDAIKNI", - "output": "cytoplasm ; L-lactate dehydrogenase activity ; glycolytic process" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MSDLFAKLMDQIEMPLDMRRSSAFSSADIIEVKVHSVSRLWEFHFAFAAVLPIATYRELHDRLIRTFEAADIKVTFDIQAAQVDYSDDLLQAYYQEAFEHAPCNSASFKSSFSKLKVTYEDDKLIIAAPRFVNNDHFRNNHLPNLVKQFEAFGFGTLTIDMVSDQEMTEHLTKDFVSSRQALVKKAVQDNLEAQKSLEAMMPPVEEATPAPKFDYKERAAKRQAGFEKATITPMIEIETEENRIVFEGMVFDVERKTTRTGRHIINFKMTDYTSSFALQKWAKDDEELRKFDMIAKGAWLRVQGNIETNPFTKSLTMNVQQVKEIVHHDRKDLMPEGQKRVELHAHTNMSTMDALPTVESLIDTAAKWGHKAVAITDHANVQSFPHGYHRARKAGIKAIFGLEANIVEDKVPISYDPVDMDLHEATYVVFDVETTGLSAMNNDLIQIAASKMFKGNIVEQFDEFIDPGHPLSAFTTELTGITDKHLQGAKPLVTVLKAFQDFCKDSILVAHNASFDVGFMNANYERHNLPKITQPVIDTLEFARNLYPEYKRHGLGPLTKRFQVSLDHHHMANYDAEATGRLLFIFLRDAREKHGIKNLLQLNTDLVAEDSYKKARIKHATIYVQNQVGLKNMFKLVSLSNIKYFEGVPRIPRTVLDAHREGLLLGTACSDGEVFDAVLTKGIDAAVDLAKYYDFIEIMPPAIYQPLVVRELIKDQAGIEQVIRDLIEVGKRAKKPVLATGNVHYLEPEEEIYREIIVRSLGQGAMINRTIGRGEGAQPAPLPKAHFRTTNEMLDEFAFLGKDLAYQVVVQNTQDFADRIEEVEVVKGDLYTPYIDKAEETVAELTYQKAFEIYGNPLPDIIDLRIEKELTSILGNGFAVIYLASQMLVNRSNERGYLVGSRGSVGSSFVATMIGITEVNPMPPHYVCPSCQHSEFITDGSVGSGYDLPNKPCPKCGTPYQKDGQDIPFETFLGFDGDKVPDIDLNFSGDDQPSAHLDVRDIFGDEYAFRAGTVGTVAEKTAYGFVKGYERDYGKFYRDAEVDRLAAGAAGVKRTTGQHPGGIVVIPNYMDVYDFTPVQYPADDVTASWQTTHFNFHDIDENVLKLDILGHDDPTMIRKLQDLSGIDPITIPADDPGVMALFSGTEILGVTPEQIGTPTGMLGIPEFGTNFVRGMVNETHPTTFAELLQLSGLSHGTDVWLGNAQDLIKEGIATLKTVIGCRDDIMVYLMHAGLEPKMAFTIMERVRKGLWLKISEEERNGYIDAMRENNVPDWYIESCGKIKYMFPKAHAAAYVLMALRVAYFKVHHPIMYYCAYFSIRAKAFELKTMSGGLDAVKARMEDITIKRKNNEATNVENDLFTTLEIVNEMLERGFKFGKLDLYKSDAIEFQIKGDTLIPPFIALEGLGENVAKQIVKARQEGEFLSKMELRKRGGASSTLVEKMDEMGILGNMPEDNQLSLFDDFF", - "output": "cytoplasm ; 3'-5' exonuclease activity ; DNA binding ; DNA-directed DNA polymerase activity ; DNA-templated DNA replication" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MLSGILIAALLMTLWGGWQPDIAHASDEFDALRIKWATLLTGGPALDPADSDIAARTDKLAQDANDYWEDMDLSSSRTYIWYALRGNGTSDNVNAVYERLRTMALAATTVGSSLYGNADLKEDILDALDWLYVNSYNSTRSRSAYNWWHWQLGIPMSLNDIAVLLYDDISAARMATYMDTIDYFTPSIGLTGANRAWQAIVVGVRAVIVKDAVKLAAARNGLSGTGIFPYATGGDGFYADGSFVQHTTFAYTGGYGSSVLETTANLMYLLSGSTWSVSDPNQSNVWQWIYEAYRPLLYKGAMMDMVRGREISRSYAQDHAVGHGIVASIVRLAQFAPAPHAAAFKQIAKRVIQEDTFSSFYGDVSTDTIRLAKAIVDDPSIAPAAAPNLYKQYAAMDRAVLQRPGFALGLALYSTRISSYESINSENGRGWYTGAGATYLYNQDLAQYSEDYWPTVDAYRIPGTTVASGTPIASGTGTSSWTGGVSLAGQYGASGMDLSYGAYNLSARKSWFMFDDEIVALGSGISSTAGIPIETVVDNRKLNGAGDNAWTANGAALSTGLGVAQTLTGVNWVHLAGNTADGSDIGYYFPGGATLQTKREARTGTWKQINNRPATPSTAVTRNYETMWIDHGTNPSGASYGYVLLPNKTSAQVGAYAADPAIEIVVNTSGVQSVKEKTLGLVGANFWTDTTQTADLITSNKKASVMTREIADERLEASVSDPTQANNGTIAIELARSAEGYSADPGITVTQLAPTIKFTVNVNGAKGKSFHASFQLGEDTSGPVDPGEPELPSVIVDNADSAGVTRTGTWKTASTQTDRYGANYLHDDNAGKGTKSVTFTPNLPIAGSYEVYLMWPAHFNREDAVQVDVGHASGTTRTAVDQRSGGGVWHSIGTYEFLAGSGGSVTIRNDALGSPDGYVVADAVKFVAVG", - "output": "extracellular region ; calcium ion binding ; mannose binding ; xanthan lyase activity ; polysaccharide metabolic process" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MEFVAKLFKFFKDLLGKFLGNN", - "output": "killing of cells of another organism" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MSEIIQDLSLEDVIGDRFGRYSKYIIQERALPDVRDGLKPVQRRILFAMYSSGNTYDKNFRKSAKTVGDVIGQYHPHGDSSVYDAMVRLSQDWKLRHVLIEMHGNNGSIDNDPPAAMRYTEAKLSQLSEELLRDINKETVSFIPNYDDTTLEPMVLPARFPNLLINGSTGISSGYATDIPPHNLAEVIQGTLKYIDQPDITINQLMKYIKGPDFPTGGIIQGIEGIKKAYETGKGKVVVRSRVDEEPLRSGRKQLIVTEIPYEVNKSSLVKKIDELRADKKVDGIVEVRDETDRTGLRIAIELKKDANSESIKNYLYKNSDLQISYNFNMVAISEGRPKLMGLREIIESYLNHQIEVVTNRTRYDLEQAEKRMHIVEGLMKALSILDEVIALIRNSKNKKDAKDNLVAEYDFTEAQAEAIVMLQLYRLTNTDIEALKKEHEELEALIKELRNILDNHEALLAVIKDELNEIKKKFKVDRLSTIEAEISEIKIDKEVMVPSEEVILSLTQHGYIKRTSTRSFNASGVTEIGLKDGDRLLKHESVNTQDTVLVFTNKGRYLFIPVHKLADIRWKELGQHISQIVPIDEDEEVVNVYNEKDFKNEAFYIMATKNGMIKKSSASQFKTTRFNKPLINMKVKDKDELINVVRLESDQLITVLTHKGMSLTYSTNELSDTGLRAAGVKSINLKDEDYVVMTEDVNDSDSIIMVTQRGAMKRIDFNVLQEAKRAQRGITLLKELKKKPHRIVAGAVVKENHTKYIVFSQHHEEYGNIDDVHLSEQYTNGSFIIDTDDFGEVESMILE", - "output": "chromosome ; extrinsic component of plasma membrane ; ATP binding ; DNA binding ; DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity ; chromosome segregation ; DNA topological change" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MTCSQTLGNNNTNKYQICEEIGRGRFGTVSRVYAPATGDFFACKTIDKASLSDDLDRACLDNEPKLMALLSYHPNIVQIHDLIDTDSTLSIFMELVHPSVSIYDRLVSSGTFFEPQTASFAKQILQALSHCHRYGVVHRDIKPENILVDLRNDTVKICDFGSGIWLGEGETTEGVVGTPYYVAPEVLMGYSYGEKVDLWSAGVVLYTMLAGTPPFYGETAEEIFEAVLRGNLRFPTKIFRGVSSMAKDFLRKLICKDASRRFSAEQALRHPWIQRAGETEERFI", - "output": "cytoplasm ; nucleus ; ATP binding ; calcium-dependent protein serine/threonine kinase activity ; calmodulin binding ; calmodulin-dependent protein kinase activity ; protein serine kinase activity ; protein serine/threonine kinase activity ; intracellular signal transduction ; peptidyl-serine phosphorylation ; protein autophosphorylation ; response to cycloheximide ; response to light stimulus" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MATKFPSFSQGLAQDPTTRRIWYGIATAHDFESHDGMTEEQLYQKLFSTHFGHLAIIGLWVAGNLFHIAWQGNFEQWVLDPLHTRPIAHAIWDPHFGQGLTDALTQAGATSPVNIAYSGLYHWWYTIGMRTNEQLFQGAIFINILVCWLLFAGWLHLQPKYRPSLAWFKNAESQLNHHLAVLFGFSSIAWTGHLIHVAIPESRGIHVGWENWLTVMPHPEGLTPFFSGNWGAYAQNPDSIDAVFGTSQGAGTAIFTFLGGLHPQSESLWLTDIAHHHLAIGVVFIIAGHMYRTNFGIGHSLKEIIEAHNTSHPKDPHRGYFGIKHNGLFETVNNSLHFQLGLALASLGVACSLVAQHMGALPSYAFIARDYTTQSALYTHHQYIAMFLMVGAFSHGAIFFVRDYDPELNKDNVLARILSTKEALISHLSWVTMLLGFHTLGIYVHNDVVVAFGTPEKQILIEPVFAQFAQAASGKMMYGFNALLANASSSASIAANSMPGNHYWMDMINRPDALTNFLPIGPADFLVHHAIALGLHTTALILIKGALDARGTKLIPDKKDLGFAFPCDGPGRGGTCDSSSWDATYLAMFWALNTIAWITFYWHWKHLAIWMGNTAQFNESGTYLMGWFRDYLWLNSSQLINGYNPFGVNALSPWAWMFLFGHLIWATGFMFLISWRGYWQELIETLVWAHQRTPIANLVGWRDKPVALSIVQARLVGLTHFTVGNFVTFGAFVIASTSGKFG", - "output": "photosystem I ; plasma membrane-derived thylakoid membrane ; 4 iron, 4 sulfur cluster binding ; chlorophyll binding ; electron transfer activity ; magnesium ion binding ; photosynthesis" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MSGRGKGGKGLGKGGAKR", - "output": "nucleosome ; nucleus ; DNA binding" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MLLTKRFSKLFKLTFIVLILCGLFVITNKYMDENTSVKEYKEYLDRYVQSYSNKYSSSSDAASADDSTPLRDNDEAGNEKLKSFYNNVFNFLMVDSPKGSTAKQYNEACLLKGDIGDRPDHYKDLYKLSAKELSKCLELSPDEVASLTKSHKDYVEHIATLVSPKGTYKGSGIATVGGGKFSLMAFLIIKTLRNMGTTLPVEVLIPPGDEGETEFCNKILPKYNSKCIYVSDILPRETIEKFVFKGYQFKSLALIASSFENLLLLDADNFPIKPLDNIFNEEPYVSTGLVMWPDFWRRTTHPLYYDIAGIAVDKKKRVRNSRDDITPPAVYTKDLKDLSDVPLSDLDGTIPDVSTESGQLMINKTKHLATALLSLFYNVNGPTWYYPIFSQKAAGEGDKETFIAAANFYGLSFYQVRTRTGVEGYHDEDGFHGVAMLQHDFVQDYGRYLNAMESIGNKYGGTKSADAIKFDKNYSLEKYTEEFFDNEDLNAKNHVDVMFIHSNFPKFDPYDLSKSNFLTTNGKPARSYTALKKVKNYDIELENFKVLNEYVCVNKNPFKYLDDLLGQDKTEWKRVCGYITDRLAFLESTHDKAIAGK", - "output": "Golgi apparatus ; Golgi membrane ; alpha-1,2-mannosyltransferase activity ; mannan biosynthetic process ; protein glycosylation ; protein mannosylation" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MMKRQFEDVTRIVIKIGTSSLVLPTGKINLEKIDQLAFVISSLMNKGKEVILVSSGAMGFGLDILKMEKRPTNLAKQQAVSSVGQVAMMSLYSQIFAHYQTNVSQILLTRDVVVFPESLANVTNAFESLISLGIVPIVNENDAVSVDEMDHATKFGDNDRLSAVVAGITKADLLIMLSDIDGLFDKNPTIYEDAQLRSHVAVVTQEIIASAGGAGSKFGTGGMLSKIQSAQMVFENKGQMVLMNGANPRDILRVLEGQPLGTWFKQIEEVTHD", - "output": "cytoplasm ; ATP binding ; glutamate 5-kinase activity ; L-proline biosynthetic process ; phosphorylation" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MWGRKRPNSSGETRGILSGNRGVDYGSGRGQSGPFEGRWRKLPKMPEAVGTDPSTSRKMAELEEVTLDGKPLQALRVTDLKAALEQRGLAKSGQKSALVKRLKGALMLENLQKHSTPHAAFQPNSQIGEEMSQNSFIKQYLEKQQELLRQRLEREAREAAELEEASAESEDEMTHPEGVASLLPPDFQSSLNRPELELSTHSPRKSSSFSEEKGESDDEKPRKGERRSSRVRQAKSKLPEYSQTAEEEEDQETPSRNLRVRADRNLKIEEEEEEEEEEEDDDDEEEEEVDEAQKSREAEAPTLKQFEDEEGEERTRAKPEKVVDEKPLNIRSQEKGELEKGGRVTRSQEEARRSHLARQQQEKETQIVSLPQEENEVKSSQSLEEKSQSPSPPPLPEDLEKAPVVLQPEQIVSEEETPPPLLTKEASSPPTHIQLQEEMEPVEGPAPPVLIQLSPPNTDAGAREPLASPHPAQLLRSLSPLSGTTDTKAESPAGRVSDESVLPLAQKSSLPECSTQKGVESEREKSAPLPLTVEEFAPAKGITEEPMKKQSLEQKEGRRASHALFPEHSGKQSADSSSSRSSSPSSSSSPSRSPSPDSVASRPQSSPGSKQRDGAQARVHANPHERPKMGSRSTSESRSRSRSRSRSASSSSRKSLSPGVSRDSNTSYTETKDPSCGQEAAAPSGPQLQVLEPKEKAPTFSASVRGRHLSHPEPEQQHVIQRLQPEQGSPKKCEAEEAEPPAATQPQTSETQISHLLESERTHHTVEEKEEVTMDTSENRPENEVPEPPLPVADQVSNDERPEGGAEEEEKKESSMPKSFKRKISVVSATKGVQAGNSDTEGGQPGRKRRWGASTAATQKKPSISITTESLKSLIPDIKPLAGQEAVVDLHADDSRISEDETERNGDDGTHDKGLKICRTVTQVVPAEGQENGQREEEEEKEPEAELPAPPQVSVEVALPPPVEHEVKKVTLGDTLTRRSISQQKSGVSITIDDPVRTAQVPSPPRGKISNIVHISNLVRPFTLGQLKELLGRTGTLVEEAFWIDKIKSHCFVTYSTVEEAVATRTALHGVKWPQSNPKFLCADYAEQDELDYHRGLLVDRPSETKAEEQGAPRPLHPPPPPPVQPPPHPRAEQREQERAVREQWAEREREMERRERTRSEREWDRDKVREGPRSRSRSRDRRRKERAKSKEKKSEKKEKAQEEPPAKLLDDLFRKTKAAPCIYWLPLTESQIVQKEAEQAERAKEREKRRKEREEEEQKEREKEAERERNRQLEREKRREHSRERERDRERERDRGDRERERERDRDRGRERDRRDTKRHSRSRSRSTPVRDRGGRR", - "output": "ASAP complex ; cytosol ; exon-exon junction complex ; nuclear speck ; nucleolus ; nucleoplasm ; nucleus ; plasma membrane ; nucleic acid binding ; apoptotic chromosome condensation ; apoptotic process ; erythrocyte differentiation ; mRNA processing ; negative regulation of mRNA splicing, via spliceosome ; positive regulation of apoptotic process ; positive regulation of monocyte differentiation ; RNA splicing" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MDNTSKINKITKIEVQKRNKKRVNLYINDEYAMAFSTELAFKHNLKIGQEVDYKELKVIAEEDNYIKCKGDALKFIEKSYKTERQVYDKLLSKGYDNKTIERVIDFLTEYKFIDDWRFGELYIEERLKREGRNKIKYSLMQKGISESIIDEKLNCVDRDKEKDALNKIAEKKYKSILKNEEDKTKIYNKLGRFLMSKGYLWEDVKSVLNKLLYSDG", - "output": "cytoplasm ; regulation of DNA repair" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MATTNSQSHYSYADNMNMYNMYHPHSLPPTYYDNSGSNAYYQNTSNYQGYYPQESYSESCYYYNNQEQVTTQTVPPVQPTTPPPKATKRKAEDDAASIIAAVEERPSTLRALLTNPVKKLKYTPDYFYTTVEQVKKAPAVSTKVTASPAPSYDQEYVTVPTPSASEDVDYLDVYSPQSQTQKLKNGDFATPPPTTPTSLPPLEGISTPPQSPGEKSSSAVSQEINHRIVTAPNGAGDFNWSHIEETLASDCKDSKRTRQTYTRYQTLELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKKDRTLDSSPEHCGAGYTAMLPPLEATSTATTGAPSVPVPMYHHHQTTAAYPAYSHSHSHGYGLLNDYPQQQTHQQYDAYPQQYQHQCSYQQHPQDLYHLS", - "output": "nucleus ; DNA-binding transcription activator activity, RNA polymerase II-specific ; DNA-binding transcription factor activity, RNA polymerase II-specific ; RNA polymerase II cis-regulatory region sequence-specific DNA binding ; anterior/posterior pattern specification ; cell fate specification ; central nervous system development ; germ cell migration ; gonadal mesoderm development ; negative regulation of transcription by RNA polymerase II ; periodic partitioning by pair rule gene ; positive regulation of transcription by RNA polymerase II ; regulation of DNA-templated transcription ; segmentation" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MAPARQELQHESRCRPSRTVDAWRAAVATRGRHMETPGYRRRTRCGGWGLPRSVSSLAAVGLLCTALTTFICWGQLPPLPWASPAPQRLVGVLLWWEPFRGRGGYPKSPPDCSLRFNISGCRLLTDRAAYGEAQAVLFHHRDLVKELHDWPPPWGARERTDKALVLRVFDDQEGAVTLTGKALETVGSRPPGQRWVWMNFESPSHTPGLRGLAKDLFNWTLSYRTDSDVFVPYGFLYSRSDPTEQPSGLGPQLARKRGLVAWVVSNWNEHQARVRYYHQLSRHVSVDVFGRTGPGRPVPAIGLLHTVARYKFYLAFENSRHVDYITEKLWRNAFLAGAVPVVLGPDRANYERFVPRGAFIHVDDFPNAASLAAYLLFLDRNVAVYRRYFRWRRSFAVHITSFWDEQWCRTCQAVQTSGDQPKSIHNLADWFQR", - "output": "cell periphery ; cell surface ; Golgi cisterna membrane ; trans-Golgi network ; 4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase activity ; alpha-(1->3)-fucosyltransferase activity ; fucosylation ; glycosphingolipid biosynthetic process ; inflammatory response ; lymphocyte migration into lymph node ; oligosaccharide metabolic process ; positive regulation of leukocyte tethering or rolling ; positive regulation of neutrophil migration ; protein N-linked glycosylation ; protein O-linked glycosylation ; regulation of leukocyte cell-cell adhesion" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MEGTGLLTAVLVFLFAAVVAVPIAQRLGIGAVLGYLIAGIAIGPWGLGFIRDVDEILHFSELGVVFLMFIIGLELNPAKLWQLRRSIFGVGAGQVVITAAVLGALLYFTQFAWQAAVIGGVGLAMSSTAMALQLMREKGMNRNEGGQLGFSVLLFQDMAVIPALALIPILAGNEGGANDWVKIGLKIAAFAGMLIGGRYLLRPLFRYIVASGVREVFTAAALLVVLGSALFMDALGLSMALGTFIAGILLAESEFQHELEIAIEPFKGLLLGLFFISVGMALDLGVLFTHLLDVLLGVLALVFIKSAILYGLARVFGLRRSVRLQFAGVLSQGGEFAFVLFSAAFSQRVLNAEQLALLLVVVTLSMMTTPLLMQVIDRILVRRYNAQEESDEKPFVEDNDPQVIIVGFGRFGQVIGRLLMANKMRITVLERDVSAVSMMRKYGYKVYYGDATELELLRAAGAEKAKAIVITCNEPEDTMALVHLCQQHFPNLHILARARGRVEAHELLQNGVKDFTRETFSSALELGRKTLLELGMHPHQAYRAQQHFRRLDMRMLRELMPQHHGDVAQISRIKEARRELEDIFQREMLHESRQLDGWDEYE", - "output": "plasma membrane ; antiporter activity ; glutathione-regulated potassium exporter activity" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MEAQYSGVGSIPENSRSSHELGIQDQGSPQLRIVLLGKTGAGKSSTGNSILGRKAFLSGICAKSITKVCEKGVSIWDGKELVVVDTPGIFDTEVPDADTQKEITRCVALTSPGPHALLLVIPLGCYTVEEHKATRKLLSMFEKKARRFMILLLTRKDDLEDTDIHEYLETAPEVLQELIYEFRNRYCLFNNKASGAEQEEQKRQLLTLVQSMVRENGGKYFTNKMYESAEGVIQKQTWKKKEFYREELERERARIRREYEAEIQDLRDELERERRRARMEREFNENELIFAERQQNARREVENTSMIYLN", - "output": "cytosol ; GTP binding" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MMEVLVLGSGVVGLTSAWYLAQAGHDVTVVDRQPRGAEETSFANAGQISYGYSSPWAAPGIPQKALKWMLEKHAPLKIQPSLDPALLSWMGKMLLNCQLSRYQVNKSRMLAIANYSRECLKALNQTYSLDYQGRQRGTLQVFRDEKQLTAIEKDMQLLAQSGVRFELLNVAQCLTHEPGLAPVQEKLVGGLWLPDDETGDYYLFCQQLTELAKQQGVRFHFDCHIQQLVCEGKKIIGVQTDLGLLKADAYVVALGSYSTSLLKPLGIEIPVYPVKGYSLTLPIIDEKFAPQSTVMDETYKVALTRFSDRIRVAGTAELAGFDPAIPEARKATIEMVARDLFPHGGDFAKGQFWTGFRPMTPDGTPIIGATPYTNLYTNTGHGTLGWTMACGSASILADVLTHGESPLSRLGLDLFRYPKAS", - "output": "D-amino-acid dehydrogenase activity ; D-alanine catabolic process" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MTNIRKSHPLMKIINNSLIDLPAPSNISSWWNFGSLLGICLALQILTGLFLAMHYTSDTATAFNSVTHICRDVNYGWVLRYLHANGASMFFICLYLHVGRGLYYGSYMHTETWNVGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGKDLVEWIWGGFSVDKATLTRFFAFHFLLPFIISALVMVHLLFLHETGSNNPTGIPSDMDMIPFHPYYTIKDVLGLLLMIMILLTLVLFSPDMLGDPDNYMPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILIIIPLLHTSKQRSMTFRPLSQCLFWLLAADLLALTWIGGQPVEHPYIIIGQFASILYFSIIIILMPLTSLVENHLXKW", - "output": "mitochondrial inner membrane ; respiratory chain complex III ; metal ion binding ; ubiquinol-cytochrome-c reductase activity ; respiratory electron transport chain" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MVEADHPGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAKDMNGKSLHGKAIKVEQAKKPSFQSGGRRRPPASSRNRSPSGSLRSARGSRGGTRGWLPSQEGHLDDGGYTPDLKMSYSRGLIPVKRGPSSRSGGPPPKKSAPSAVARSNSWMGSQGPMSQRRENYGVPPRRATISSWRNDRMSTRHDGYATNDGNHPSCQETRDYAPPSRGYAYRDNGHSNRDEHSSRGYRNHRSSRETRDYAPPSRGHAYRDYGHSRRDESYSRGYRNRRSSRETREYAPPSRGHGYRDYGHSRRHESYSRGYRNHPSSRETRDYAPPHRDYAYRDYGHSSWDEHSSRGYSYHDGYGEALGRDHSEHLSGSSYRDALQRYGTAHGAPPARGPRMSYGGSTCHAYSNTRDRYGRSWESYSSCGDFHYCDREHVCRKDQRNPPSLGRVLPDPREACGSSSYVASIVDGGESRSEKGDSSRY", - "output": "nucleolus ; nucleoplasm ; spliceosomal complex ; RNA binding ; mRNA processing ; positive regulation of mRNA splicing, via spliceosome ; RNA splicing" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MSAPTHQQDLIALLEERGFVHQCTDREGLAAHLAAGPVTAYLGFDATADSLHVGHLQGLMLMRWLQKAGHRPLLLIGGATTRIGDPSFRDSSRPILGEAQIQANIDGIVRVFSRYVALDEGSLVNNAEWLDGVGYLEFLDQVGRHFSINRLLTFDAIRQRLDREHSLSFLEFGYTLLQAYDFVELSRRRGCTLQLGGADQWANIINGVELSRRQGGAQLFGLTMPLLATRDGRKMGKSAQGAVWLNAERLAPFDFWQFWRNCDDRDVARFLALFSELPMDEVRRLGALQGAELNEAKVVLANAATALAHGADAARAAADAARGVFADGARDAGLPLVRISRERLAQGLSLTELLVDNALQASRGAVRRLAAGGGLRLDGMPVADPDAPLTGEVDGRRLSLGKKQHLQLRLDD", - "output": "cytoplasm ; ATP binding ; RNA binding ; tyrosine-tRNA ligase activity ; tyrosyl-tRNA aminoacylation" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MTTDFLFPKIADCSYVSCYCEENVWKLCEQVKRTRPEELSKCYAVFVSNEGRTVPLWRQKAGRGDDQVVIWDYHVFFIHNPLLNRCLVFDLDTTLPFPTYFHKYVTETFRSDLALRPEHHRFFRVIPADTYLIEFSSDRRHMRRPDGSWIKPPPSYPPILSNSNMHCLGDFICMSAGKGPGAVYSLSEFVQNFYKSPHVMAQNNK", - "output": "protein-N-terminal asparagine amidohydrolase activity ; protein-N-terminal glutamine amidohydrolase activity" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MAAAATAAASPVEGLTGGGGGGGGGVDGLFVELWRACAGPLVTVPAVGERVFYLPQGHIEQVEASTNQVAEQQGAPLYNLPWKIPCKVMNVELKAEPDTDEVYAQLTLLPEKQQDGNGSGNGNVSKDKVEEEEVVPPAATERPRVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQANIPSSVISSHSMHLGVLATAWHAVNTGTMFTVYYKPRTSPSEFVVPRDLYKESLKRNHSIGMRFKMTFEGEEAAEQRFTGTIVGVGDSDPSGWADSKWRSLKVRWDEAASVPRPDRVSPWQIEPANSPSPVNPLPAPRTKRARPNVLASSPDLSAVNKEVASKVMANSQQNGLPRAFHSQENMNLRSRFGDSNELNTSQKLTMWSSGSNQEKNNVSVQRELGSQSWMQMRRPDGSSEILSGFQPLKDTRNPLSSFPSQISGNRSNTWNTINVHYPDQNANHNMYPGTWSLMPPNTGFGVNQQNYLMTPDITLPQRSLNAKFGGNGAFTSLRAHGIDQRSSGWLGHIEPSSHIDDASSSLIKPQPLVIDHNVQKAKGSSCMLFGISLDSPAKPELLISPPSVAFDGKLQQDALEEDECSDPSKTVKPLDGAQHDSAREKHQSCPDGTKNIQSKQQNGSSRSCKKVHKQGIALGRSIDLTKFTCYDELIAELDQMFDFNGELNSSSKNWMVVYTDNEGDMMLVGDDPWNEFCNMVHKIFIYTREEVQKMNPGALNSRSEDSRSTSVERGLVGEGLQGGLSTPSLNSENC", - "output": "nucleus ; DNA binding ; auxin-activated signaling pathway ; regulation of DNA-templated transcription" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MNPNFLDFEQPIADLQAKIEGLRLVGNDNSLNISDEIARLQDKSNTLTESIFGNLTSWQIARLARHPRRPYTLDYLEHIFTEFEELHGDRHFSDDAAIVGGTARLDGKPVMVIGHQKGREVREKVRRNFGMPRPEGYRKACRLMEMAERFKMPILTFIDTPGAYPGIDAEERNQSEAIAWNLRVMARLKTPIIATVIGEGGSGGALAIGVCDQLNMLQYSTYSVISPEGCASILWKTADKAADAAEAMGITAERLKSLNIVDKVIQEPLGGAHRDPAKMSESIRADLVQQLDMLGKFDNDALLARRYERLMSYGL", - "output": "acetyl-CoA carboxylase complex ; acetyl-CoA carboxylase activity ; ATP binding ; carboxyl- or carbamoyltransferase activity ; fatty acid biosynthetic process ; malonyl-CoA biosynthetic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MTDNNTALKKAGLKVTLPRLKILEVLQEPDNHHVSAEDLYKRLIDMGEEIGLATVYRVLNQFDDAGIVTRHNFEGGKSVFELTQQHHHDHLICLDCGKVIEFSDDSIEARQREIAAKHGIRLTNHSLYLYGHCAEGDCREDEHAHEGK", - "output": "cytoplasm ; DNA binding ; DNA-binding transcription factor activity ; metal ion binding" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MARKTLTTALVKKFIPSRKSKSRKGENGIVLVVGGSYIYHGAPILSSIAALRSGTDLVYTSVPKINVASTRSVSPNLIVIPLVDQKLTRGAVNKLLGALPRKLDSATIGMGLAIQEKNALLHLVKSLLDRDVRLSLDASALIPEVLPLLANKNVVVTPHAGEFKRLFGQVPSNSKNERIKLVEEKAKEFGITVLLKGSTDIISNGSTTYLYEKKIPAMTVGGTGDVLSGLVAGLLSKNRKPLESAAAAAFINGLAGKVVQKKLGLHMTSMDLLPEISTVMKPFDKIM", - "output": "ADP-dependent NAD(P)H-hydrate dehydratase activity ; ATP binding ; metabolite repair ; nicotinamide nucleotide metabolic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MKQRGVTVWLTGLSGAGKSTITEALQAKLIAEGYSIEVLDGDIVRTNLTKGLGFSKEDRDENIRRIGFVSNLLTRHGVIVLVSAISPYREIREEVRGKIGNFVEVFVNAPLSVCEDRDVKGLYKRARAGEIKSFTGIDDPYEPPFNPEVECRTDLETLEESVAKVWNKLTELGYIHQAVAV", - "output": "adenylylsulfate kinase activity ; ATP binding ; hydrogen sulfide biosynthetic process ; phosphorylation ; sulfate assimilation" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MEEFQGYLELYRSWQDNFLYPLILQESIYALVHNQDLGLNGSILLSKKKGYDTKYSLLVVKRLVIRMYQQNFVILSLNDSNKNEFFVPNKNLYSQRISEGFAVLAEIPFSMRVMSSLKGKERKQYQNLRSIHSIFPFLEDKFSRLNHVLDILIPHPVHTKILVQTIRYCVKDISCLHLLQLLLYEYCNNGITLKGSVSNLSKNKNQRFLLFLYNSYVCECESIFVFLRNQSSHLRSTSYGAFLARVYFYLKLEHFLKVFTKHFRVILQFFKDPFMHYVRYQGKWILASRGTFLLMTKLKYYFVNFWQCNFYLWLQTRRIYINKSLNQPIDFIGFLLSVRLNPSVVRSQMLENSFLIYNGIKKFETLVPTMSLIGSLAKAKFCNVLGHPISKPAWADLSDSDIIRRFGRMCRNLSHYYSGSSKKGGLYRIKYILRLSCARTLARKHKSTVRAFMKRLGSEFFEEFFFKEEKVISLILSRDSSISRRLYRGPIWYFDIFCIHDLASHND", - "output": "chloroplast ; RNA binding ; mRNA processing ; RNA splicing ; tRNA processing" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MAISAWMPLLVALIVVWISAAEVDAQVPGPRTRYQPNWASLDQRPLPQWYDDAKVGIFLHYGVYSVPSFGSEWFWTNWKNLRNPEYVQFMQRNYKPDFTYQEFASQFTAELFNATKWALLFKDSGARYVVLTSKHHDGFTLWPSKNSYGWNSMDVGPKRDIVKELAAAIRKESDLRFGLYYSLFEWFNPLWTDDKLHLLMQQHFVERKVRPEQMELVQQYLPEIIWSDGDWEAPAKYWRSEEFIAWLYNDSPVRDTVVTNDRWGFGTACMHGDFYNCADRFNPGVLQAHKWENAFTLDRTSWGQRFDVSLSDFMTSKEVIKEIITTVSCNGNVLINVGPTKFGTILPIFEERLRDMGRWLKFNGEGIYGSVPWIYQNDTINGNVWYTRQKEASNGKITIYAFVLEYPYDTNELDIYPLGKDINIFRNVMLTGIDMGTGGDILNEQSTEVVMLGMEDTKIKWNADHNRLHIVFPPKNHIDKRGLDYAWTFKITIT", - "output": "lysosome ; outer acrosomal membrane ; sperm plasma membrane ; alpha-L-fucosidase activity ; fucose binding ; binding of sperm to zona pellucida ; defense response to bacterium ; fucose metabolic process ; glycosaminoglycan catabolic process ; glycoside catabolic process" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MKIPLGILLSENQADKENILKHLEENSYIITVGDRTTEKMIDFDLIPSLQIVDGIEKREKREPPKLVNTTEITVDNPPAEITSQSIDVIKKAFSMESPVRILVTGEEDLLVLPVCIHAPENSVVMYGQPNEGLVIVKITSEIRNKVQSLLDLME", - "output": "kinase activity ; coenzyme A biosynthetic process ; phosphorylation" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MAKRHLTRRQSWRIEKIQEERAARAARRESRAVEELEGGDLGPEQTGQVIAHFGVQVEVESADGQVSRCHLRANLPALVTGDQVVWRAGNQGIGVIVAQLPRRSELCRPDMRGLLKPVAANVDRIVIVFAPRPEPHANLIDRYLIAAEHAGIQPLLLLNKADLVDESNAEGIDALLNVYRTLGYPLIEVSAFNGLAMDELRGALDGHVSVFVGQSGVGKSSLVNALLPGVDTRVGDLSTVTGKGTHTTTTARLFHFPGGGDLIDSPGIREFGLGHVSRDDVEAGFIEFRDLLGHCRFRDCKHDREPGCALLQALEDGRIMPQRMASYRHILASMPETDY", - "output": "cytoplasm ; GTP binding ; GTPase activity ; metal ion binding ; rRNA binding ; ribosomal small subunit biogenesis" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MNKIPIKDLLNPQITDEFKSSILDINKKLFSICCNLPKLPESVTTEEEVELRDILGFLSRANKNRKISDEEKKLLQTTSQLTTTITVLLKEMRSIENDRSNYQLTQKNKSADGLVFNVVTQDMINKSTKPYRGHRFTKENVRILESWFAKNIENPYLDTKGLENLMKNTSLSRIQIKNWVSNRRRKEKTITIAPELADLLSGEPLAKKKE", - "output": "nucleus ; DNA binding, bending ; DNA-binding transcription factor activity, RNA polymerase II-specific ; DNA-binding transcription repressor activity, RNA polymerase II-specific ; RNA polymerase II cis-regulatory region sequence-specific DNA binding ; negative regulation of transcription by RNA polymerase II ; regulation of transcription by RNA polymerase II" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MISEENFQQHTPMMQQYLKLKAENPDILLFYRMGDFYELFYDDAKKAAALLDISLTKRGQSAGQPIPMAGMPYHAVEGYLAKLVQLGESVAICEQIGDPTTSKGPVERQIVRIVTPGTVSDEALLPERQDNLIAAVYQEKEKFGLATLDMTSGRFQLCEPADKETLRAELQRIAPVELLYCEEFNEMAAIEHCKGLRRRPIWEFELSTAITLLNRQFGTKDLRAFGVEKSPLGLSAAGCLLQYAKETQRTALPHIQSISLIQNQDCIQLDAATRRNLELTQNLAGGTENTLASVLDKCVTPMGSRLLKRWIHQPVRDVEKLKQRQQSIAEILNFDLVDELQPYLQLVGDMERILARVALRSARPRDLTRLRTALEQIPALRAIVQQKTPPFLTALFSQIADFSEQCDLLQRALIETPPLLIRDGGVIAEGYNAELDEWRMLSDGATQYLENLEKRERESTGIDTLKIGFNAVHGYYIQISQGQAHKAPIHYVRRQTLKNAERYIIPELKEYEDKVLKSKGAALALEKQLYDELFDLLLPHLGSLQLASLALSELDVLVNLAERADTLNYVMPTFCDEVSVKIKNGRHPVVEQVLKDPFIANPVELNHNRHLLVITGPNMGGKSTYMRQTALITLLAYIGSFVPADSARIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATAQSLVLIDEIGRGTSTYDGLSLAWACAEWLSKKIRSLTLFATHYFELTALPEQLEGIANIHLDALEHNNTIAFMHAVQNGAASKSYGLAVAALAGVPQSVIKLAKQKLTQLEKNSSYSAEQQIQALREANHNQGELFFEQETDALREAIEKLDPDDLSPKQALAYLYQLKKMVG", - "output": "cytosol ; ATP binding ; ATP-dependent DNA damage sensor activity ; damaged DNA binding ; mismatched DNA binding ; mismatch repair" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MTENKCPVTGKMSKATAGSGTTNKDWWPNQLNLNILHQNSQLSNPMSKDFNYAEEFKKLDFQALKVDLYMLMTDSQIWWPADYGNYGPFFIRMAWHSAGTYRVGDGRGGGSFGLQRFAPLNSWPDNINLDKARRLLWPIKKKYGNKISWADLMILTGNCALESMGLKTLGFGGGRVDVWEPQEDIYWGSEKEWLGDEREKDDEELENPLAAVQMGLIYVNPEGPNGNPDPLGSAHDVRETFARMAMNDEETVALVAGGHTFGKCHGAASPSYVGPAPEAAPIEEQGLGWKNTYGSGNGDDTIGSGLEGAWKANPTKWTMGYLKTLFKYDWELVKSPAGAYQWLAKNVDEEDMVIDAEDSTKKHRPMMTTADLGLRYDPIYEPIARNYLKNPEKFAHDFAAAWFKLTHRDMGPISRYLGPEVPKESFIWQDPIPLVKHKLITKKDITHIKKKILDSGLSISDLVATAWASASTFRGSDKRGGANGARIRLEPQKNWEVNEPKKLNNVLNTLKQIKENFNSYHSKDKKVSLADIIILGGCVGIEQAAKRAGYNINVPFIPGRTDATQKQTDVKSFAVLEPKGDGFRNYLKTKYVVKPEDMLIDRAQLLTLTAPEMTVLIGGMRVLNCNYNKSKDGVFTNRPECLTNDFFVNLLDMNTVWKPKSEGKDRFEGFDRETGELKWTATRVDLIFGSNSQLRAIAEVYACDDNKEKFIQDFIFAWNKIMNADRFEIK", - "output": "catalase activity ; heme binding ; metal ion binding ; hydrogen peroxide catabolic process ; response to oxidative stress" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MAKKSMIERDKKRARMVAKYAAKRAALKEAFNNAADPLEKLEIHRKIQNLPRNSSPTRMRNRCQITGRPRSYYRDFGLCRNVLRDWAHQGLLPGVVKSSW", - "output": "cytoplasm ; ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MSGLLQLDEESLYDHIFERYTLLTSNNDSLKQDLGIVDRTVSKITIDIDQFDFNNKKSNNDFYSIEINQPITSLNSSSVNNNSTTGYVVWSTTPFFTRWLIFHSNASIFRNGGSIELIDQDDELKLPPMFSNSVGLLELGSGIAGILPVTLGNFVGSFIATDQIGILSTLKTNILENLSQLNRKIVTSRSLNLNLDVDESTLLKRSLLSLECLPLDWELFDIKDTTKLDPALLSLFKEKETIYVLAMDVIYNEYLIESFLSTIQNLKSLAFKFNVNLNCLIGIQLRSEEVTTLFLEKAIIDYEMKVYYIQDNILESSRFSIYMI", - "output": "methyltransferase activity ; protein methylation" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MSEAAHSGAAPADLVELGRIASAYGVKGWVKVQPHSAQAEVLRTVSHWWLTRPAPQAARDVVASVPRAYQVLQARVHGGAVVAQLAGIDDRDQAEALRGCFVQAARSAFPAPADDEYYWVDLIGCALYSDADGEPRLLGVVDEVFDNGAHAVLKVLRQQIQPGQPGPVPLLDPKGRPLEELVPFVRAHIRHVDLAARRIDSDWPLDY", - "output": "cytoplasm ; ribosome ; ribosome binding ; ribosomal small subunit biogenesis ; rRNA processing" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MLYPTPIAKLIDSYSKLPGIGIKTATRLAFYTIGMSNEDVNDFAKNLLAAKRELTYCSICGNLTDDDPCHICTDTSRDQTTILVVEDAKDVSAMEKIQEYHGYYHVLHGLISPMNGVGPDDINLKSLITRLMDGKVSEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIEYADEVTLLRAIENRTEL", - "output": "DNA binding ; metal ion binding ; DNA recombination ; DNA repair" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MTSALENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIGEIDEETDSALDLGNIRAEPLNSVAH", - "output": "Lsm2-8 complex ; nucleus ; precatalytic spliceosome ; U2-type precatalytic spliceosome ; U4/U6 x U5 tri-snRNP complex ; U6 snRNP ; RNA binding ; mRNA splicing, via spliceosome" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "REKIGVMFGCFSYGTRVQLADGSTEKIGKIVNQKMDVEVMSYDPVTDQIVPRKVVNWFNNGPAEQFLQFTVEKSGGNGRSQFAATPNHLIRTPAGWTEAGDLIAGDRVLAAERHLLSDQQFQVILGSLMGGGNLSPNLHDRNGVRFRMGHGARQADYLEWKTALLGNIGHSVRENDQGARFVDFTPLPELGELRRAVYLGDGKKFLSEDYLKALTPLALAVWYMDDGSFTVRSKGVQQRTQGGSGRIEICVEAMAEGTRERLRDYLRDTHGLDVRLRSAGSGKSMLTFSTEATAKFQELVAPHMAPSMEHKLLPRFRGLGTVEPRFVEPAQRLVPARVLDVQVKPRTRSMNRFDIEVEGNHNYFVDGVMVHNSPETTTGGKALKFYASVRMDVRRIETLKDGSDAVGNRTRVKVVKNKVSPP", - "output": "cytoplasm ; ATP binding ; ATP-dependent activity, acting on DNA ; endonuclease activity ; single-stranded DNA binding ; DNA recombination ; DNA repair ; intein-mediated protein splicing ; SOS response" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MFITDPISDMIVRIKNANQRKFKTVLIPYSNKKAKILEILLNEGYISSFVTKGEGKDKTLEVALKYKGNQSAIIDFKRISKPGLRVYAAANNLSSVLSGYGTVIISTSKGVMTEKQARKENVGGEVLAYIW", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MKLPIYLDYAATTPVDPRVAEKMFQYMTMDGIFGNPASRSHRYGWQAEEAVDIARNQVADLINADHREIVFTSGATESNNLAIKGVAHFYNKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLEPASNGIIPMERLEAAMRDDTILVSIMHVNNEIGVIHDIDAIGELCRSKGIIFHMDAAQSAGKLPIDVQATKVDLISISGHKMYGPKGIGALYVRRKPRIRLEAQMHGGGHERGMRSGTLPTHQIVGLGEAAAIAKAEMATDNERIGRLRDKLWNGIKHIEETYINGDLTQRFCGSLNVSFNYVEGESLMMALKDLAVSSGSACTSASLEPSYVLRALGLNDEMAHSSIRFSIGRFTTEEEIDHAIETITQSIDKLREMSPLWEMFKDGIDLNQVQWAHH", - "output": "cytoplasm ; 2 iron, 2 sulfur cluster binding ; cysteine desulfurase activity ; metal ion binding ; pyridoxal phosphate binding ; cluster assembly" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MARMIQCAKLGKEAEGLDFPPLPGELGKRIYESVSKEAWQGWLKQQTMLINENRLNMADPRARQYLMKQTEKYFFGDGADQASGYVPPTEG", - "output": "iron ion binding" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MSEIITSLQTELSNRHANMVSEAVLAFSEHHDSALHSYFLNARVKDVILESLRTTEEKLRALDKLQLDASKNLSNLLVEYNSINAELESVNSKISSISSQEYALEEFQALSQNFEKNLVQHRRNSQNKLKCAMEKLKMIETSTHKAILDNF", - "output": "chromatin ; cytosol ; linear element ; nucleus ; meiotic DNA double-strand break formation involved in reciprocal meiotic recombination" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MRSPGIVLLLLLLLLLPPGAAPCPADLCPAPPRVNVSLDAAPAARWLPVLRLFDPGLLRAAVARIVGDRVPKWRDVIGKLVAEMESFLPQPYTKEIRGISDFLNLSLADGFIVNLAYEASAFCTSVVAQDSRGHIYHGRNLDYPFGDLLRKMTVDVQFLKNGQIAFTGTTFIGYVGLWTGQSPYKFTVSGDERDKGWWWENMIAALFQGHSPVSWLIRTTLSESEDFEASVYKLAKTPLIADVYYIVGGTAPGEGVVVTRNRGGPADIWPLDPLNGAWFRVETNYDHWKPVPKSDDRRTPAIKALNATGQANLSLEALFQVLSVVPVCNKITVYTTVMSAATPDKYMTRIRNLS", - "output": "extrinsic component of membrane ; lysosome ; ceramidase activity ; fatty acid amide hydrolase activity ; N-(long-chain-acyl)ethanolamine deacylase activity ; N-acylsphingosine amidohydrolase activity ; fatty acid metabolic process ; lipid catabolic process ; N-acylethanolamine metabolic process ; N-acylphosphatidylethanolamine metabolic process ; sphingosine metabolic process" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MMTNLFSVFDPSAIFNLSLNWLSTFLGLLMIPSIYWLMPSRYNIFWNSILLTLHKEFKTLLGPSGHNGSTFIFISLFSLILFNNFMGLFPYIFTSTSHLTLTLSLALPLWLCFMLYGWINHTQHMFAHLVPQGTPAILMPFMVCIETISNIIRPGTLAVRLTANMIAGHLLLTLLGNTGPSMSYLLVTFLLVAQIALLVLESAVTMIQSYVFAVLSTLYSSEVN", - "output": "mitochondrial inner membrane ; proton-transporting ATP synthase complex, coupling factor F(o) ; proton transmembrane transporter activity ; proton motive force-driven ATP synthesis" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MFKVNEYFDGTVKSIGFAMAEGPATIGVMAPGEYEFGTSQLEVMHVVAGALTVKLPGSDSWSTFEAGSNFTVPANSKFQLKVAVDTAYLCEYR", - "output": "guanosine phosphorylase activity ; purine-nucleoside phosphorylase activity ; pyrimidine-nucleoside phosphorylase activity ; thymidine phosphorylase activity ; uridine phosphorylase activity" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MNTEKLETLLGFYKQYKALSEYIDKKYKLSLNDLAVLDLTMKHCKDEKVLMQSFLKTAMDELDLSRTKLLVSIRRLIEKERLSKVRSSKDERKIYIYLNNDDISKFNALFEDVEQFLNI", - "output": "cytoplasm ; DNA binding ; regulation of DNA-templated transcription" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MVQISEVKGNSRDNRTAAHTHIKGLGLRPDGTAEVSGDGWVGQAAAREACGVVVDLIKAKKMAGRAVLLAGGPGTGKTALALAVSQELGTKVPFCPIVGSEIYSAEVKKTEALMENFRRAIGLRVRETKEVYEGEVTELTPQEAENPLGGYGRTISHLIIGLKSAKGTKKLRLDPSIYEAIQKERVTVGDVIYIEANTGACKRVGRSDAYATEFDLEAEEYVPVPKGEVHKKKEIVQDVTLHDLDIANARPQGGQDVMSMMGQLMKPKKTEITDKLRQEINKVVNRYIDQGVAELVPGVLFIDEVHMLDIECFTYLNRALESSISPIVILASNRGHTVIRGTDDISAAHGIPPDLLARLLIIPTHPYSPDEIKTIIRLRAKTEGLNITDPALDKVAEHGSKVSLRYALQLLTPASILARVNGRPGGIEEADVTECEDLFLDSKRSAAIVNQDSEKFLY", - "output": "ASTRA complex ; Ino80 complex ; NuA4 histone acetyltransferase complex ; R2TP complex ; Swr1 complex ; 3'-5' DNA helicase activity ; 5'-3' DNA helicase activity ; ATP binding ; ATP hydrolysis activity ; DNA helicase activity ; box C/D snoRNP assembly ; chromatin remodeling ; DNA repair ; histone acetylation ; regulation of transcription by RNA polymerase II" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MSEVINVNCPTCGKAVVWGEISPFRPFCCKRCQLIDLGEWAAEEKRIPSEGGLSDSDDWSEELK", - "output": "DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) inhibitor activity ; zinc ion binding ; regulation of DNA-templated transcription" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MAKKKVVTQIKLQCPAGKATPAPPIGPALGPHGVSAPQFVQQFNDRTKSMEPGLVIPVVITVYADKSFTFILKTPPASVLIKKACKIEKGSATSVTAKVGKLSKAALEEIAKTKMPDINANDIEAAKKIIAGTARSMGVEVER", - "output": "ribonucleoprotein complex ; ribosome ; large ribosomal subunit rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MHALPRYAVFGNPAAHSKSPQIHQQFALQEGVDIEYGRICADIGGFAQAVSTFFETGGCGANVTVPFKQEAFHLADEHSDRALAAGAVNTLVWLEDGRIRGDNTDGIGLANDITQVKNIAIEGKTILLLGAGGAVRGVIPVLKEHRPARIVIANRTRAKAEELARLFGIEAVPMADVNGGFDIIINGTSGGLSGQLPAVSPKIFRDCRLAYDMVYREAAKPFLDFARQSGAKKTADGLGMLVGQAAASYALWRGFKPDIRPVIEHMKAL", - "output": "NADP binding ; shikimate 3-dehydrogenase (NADP+) activity ; amino acid biosynthetic process ; aromatic amino acid family biosynthetic process ; chorismate biosynthetic process ; shikimate metabolic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MKTLVLLSALVLLAFQVQADPIQNTDEETKTEEQPGEEDQAVSISFGGQEGSALHEKSLRGLLCYCRKGHCKRGERVRGTCGIRFLYCCPRR", - "output": "azurophil granule ; extracellular space ; transport vesicle ; phospholipid binding ; pore-forming activity ; protein homodimerization activity ; antibacterial humoral response ; antimicrobial humoral immune response mediated by antimicrobial peptide ; cellular response to lipopolysaccharide ; defense response to bacterium ; defense response to Gram-negative bacterium ; defense response to Gram-positive bacterium ; disruption of membrane integrity in another organism ; innate immune response in mucosa ; killing of cells of another organism" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MARAFLFVLDSFGVGGAPDAAAYGDEGADTLGHIAEFCAAGAGDRAGLRDGPLSLPNLSELGLMQIARSASGRFPAGMPIPEKVYGIYGAATEISRGKDTPSGHWEIAGTPVSFDWGYFPTEGDAFPEELIEALCRDAGVSGILGNCHASGTEIIARLGEEHIRTGKPICYTSSDSVFQVAAHEVHFGLDRLLAFCQVARGLLDRYNIGRVIARPFIGHSSSTFQRTGNRRDFSVLPPEPTLLDRLIEHGRHVHAVGKIGDIFAHQGISRLIKANGNEALMDATLATIDEAEDGDLVFTNFVDFDMVYGHRRDVPGYAAALEAFDARLAEVHKKLKPGDLVVLTADHGCDPTWRGTDHTRERVPVIAYGPGIRSRSIGVRRSYADIGESIARHLGIPAGPHGRSFL", - "output": "cytoplasm ; magnesium ion binding ; manganese ion binding ; phosphopentomutase activity ; 5-phosphoribose 1-diphosphate biosynthetic process ; cellular metabolic compound salvage ; deoxyribonucleotide catabolic process" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MKVLGRSFFWVLFPVLPWAVQAVEHEEVAQRVIKLHRGRGVAAMQSRQWVRDSCRKLSGLLRQKNAVLNKLKTAIGAVEKDVGLSDEEKLFQVHTFEIFQKELNESENSVFQAVYGLQRALQGDYKDVVNMKESSRQRLEALREAAIKEETEYMELLAAEKHQVEALKNMQHQNQSLSMLDEILEDVRKAADRLEEEIEEHAFDDNKSVKGVNFEAVLRVEEEEANSKQNITKREVEDDLGLSMLIDSQNNQYILTKPRDSTIPRADHHFIKDIVTIGMLSLPCGWLCTAIGLPTMFGYIICGVLLGPSGLNSIKSIVQVETLGEFGVFFTLFLVGLEFSPEKLRKVWKISLQGPCYMTLLMIAFGLLWGHLLRIKPTQSVFISTCLSLSSTPLVSRFLMGSARGDKEGDIDYSTVLLGMLVTQDVQLGLFMAVMPTLIQAGASASSSIVVEVLRILVLIGQILFSLAAVFLLCLVIKKYLIGPYYRKLHMESKGNKEILILGISAFIFLMLTVTELLDVSMELGCFLAGALVSSQGPVVTEEIATSIEPIRDFLAIVFFASIGLHVFPTFVAYELTVLVFLTLSVVVMKFLLAALVLSLILPRSSQYIKWIVSAGLAQVSEFSFVLGSRARRAGVISREVYLLILSVTTLSLLLAPVLWRAAITRCVPRPERRSSL", - "output": "membrane ; potassium:proton antiporter activity" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MMSTSRAVKSPACAARRRQWSADAPNRTATFLACRHGRRLGGGGGAPCSVRAEGSNTIGCLEAEAWGGAPALPGLRVAAPSPGDAFVVPSEQRVHEVVLRQAALAAAAPRTARIEPVPLDGGLKAAFHRCGEVCREYAKTFYLATQLMTPERRMAIWAIYVWCRRTDELVDGPNASHISALALDRWESRLEDIFAGRPYDMLDAALSDTVARFPVDIQPFRDMIEGMRMDLKKSRYRSFDELYLYCYYVAGTVGLMSVPVMGISPASRAATETVYKGALALGLANQLTNILRDVGEDARRGRIYLPQDELEMAGLSDADVLDGRVTDEWRGFMRGQIARARAFFRQAEEGATELNQESRWPVWSSLLLYRQILDEIEANDYDNFTRRAYVPKTKKLMALPKAYLRSLVVPSSSSQAESRRRYSTLT", - "output": "plastoglobule ; 15-cis-phytoene synthase activity ; farnesyltranstransferase activity ; geranylgeranyl-diphosphate geranylgeranyltransferase activity ; carotenoid biosynthetic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MDDISPSELKTILHSKRANLYYLQHCRVLVNGGRVEYVTDEGRHSHYWNIPIANTTSLLLGTGTSITQAAMRELARAGVLVGFCGGGGTPLFSANEVDVEVSWLTPQSEYRPTEYLQRWVGFWFDEEKRLVAARHFQRARLERIRHSWLEDRVLRDAGFAVDATALAVAVEDSARALEQAPNHEHLLTEEARLSKRLFKLAAQATRYGEFVRAKRGSGGDPANRFLDHGNYLAYGLAATATWVLGIPHGLAVLHGKTRRGGLVFDVADLIKDSLILPQAFLSAMRGDEEQDFRQACLDNLSRAQALDFMIDTLKDVAQRSTVSA", - "output": "DNA binding ; DNA endonuclease activity ; identical protein binding ; metal ion binding ; defense response to virus ; maintenance of CRISPR repeat elements" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MSNLNLATLDISEHANLPTSSEVLFKAKADKKLSFESIAAAIGRNEVATAAIFYGQAKASEEDIAKLAQVLEIDHAHLESLLSGFPDRGKSVSFPPKDPLIYRLYEIVQNYGYAYKAVMNEKFGDGIMSAISFSTTVEKETDKDGNNWAVVTWRGKWYV", - "output": "cyanate hydratase activity ; DNA binding ; cyanate metabolic process" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MEQTQTAEGTDLLIGDEKTNDLPFVQLFLEEIGCTQYLDSFIQCNLVTEEEIKYLDKDILIALGVNKIGDRLKILRKSKSFQRDKRIEQVNRLKNLMEKVSSLSTATLSMNSELIPEKHCVIFILNDGSAKKVNVNGCFNADSIKKRLIRRLPHELLATNSNGEVTKMVQDYDVFVLDYTKNVLHLLYDVELVTICHANDRVEKNRLIFVSKDQTPSDKAISTSKKLYLRTLSALSQVGPSSSNLLAQNKGISHNNAEGKLRIDNTEKDRIRQIFNQRPPSEFISTNLAGYFPHTDMKRLQKTMRESFRHSARLSIAQRRPLSAESNNIGDILLKHSNAVDMALLQGLDQTRLSSKLDTTKIPKLAHKRPEDNDAISNQLELLSVESGEEEDHDFFGEDSDIVSLPTKIATPKNWLKGACIGSGSFGSVYLGMNAHTGELMAVKQVEIKNNNIGVSTDNNKQANSDENNEQEEQQEKIEDVGAVSHPKTNQNIHRKMVDALQHEMNLLKELHHENIVTYYGASQEGGNLNIFLEYVPGGSVSSMLNNYGPFEESLITNFTRQILIGVAYLHKKKIIHRDIKGANILIDIKGCVKITDFGISKKLSPLNKKQNKRASLQGSVFWMSPEVVKQSATTAKADIWSTGCVVIEMFTGKHPFPDFSQMQAIFKIGTNTTPEIPSWATSEGKNFLRKAFELDYQYRPGALELLQHPWLDAHII", - "output": "ATP binding ; MAP kinase kinase kinase activity ; protein serine kinase activity ; protein phosphorylation ; response to pheromone" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MNQSYFPHHQSDLSLQRVEAALDALRAGQGVLVTDDEQRENEGDLIFAAQSLTREQVAMLIRECSGIVCLCLTDEAVRRLDLPLMVSDNSSRYQTAFTVSIEAAEGVTTGVSAADRLTTIRAAIADDAGPLCLSRPGHVFPLRARPGGVLERRGHTEATVDLMRLAGLKPCGVLCELTNPDGSMARMPEIVAFSRKHGFPLITVEELVQYRIVREQPAALLQAEAESAGALCSA", - "output": "3,4-dihydroxy-2-butanone-4-phosphate synthase activity ; magnesium ion binding ; manganese ion binding ; riboflavin biosynthetic process" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MHTQVHTARLVHTADLDSETRQDIRQMVTGAFAGDFTETDWEHTLGGMHALIWHHGAIIAHAAVIQRRLIYRGNALRCGYVEGVAVRADWRGQRLVSALLDAVEQVMRGAYQLGALSSSARARRLYASRGWLPWHGPTSVLAPTGPVRTPDDDGTVFVLPIDISLDTSAELMCDWRAGDVW", - "output": "acyltransferase activity, transferring groups other than amino-acyl groups ; response to antibiotic" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MSFPVEVLAGIAIELQRGIGHQDRFQRLITTLRQVLACDASALLRYESRQFIPLAIDGLAQDVLGRRFTLEGHPRLEAIARAGDVVRFPADSDLPDPYDGLIPGQESLKVHACVGLPLFAGQNLIGALTLDAMTPEQFEVFSDEELRLVAALAAGALSNALLIEQLESQNMLPGSSGVFEPIKETHMIGLSPAMTQLKKEIEIVAGSDLNVLIGGETGTGKELVAKAIHQGSPRAVNPLVYLNCAALPESVAESELFGHVKGAFTGAISNRSGKFEMADNGTLFLDEIGELSLALQAKLLRVLQYGDIQRVGDDRSLRVDVRVLAATNRDLREEVLAGRFRADLFHRLSVFPLFVPPLRERGDDVVLLAGYFCEQCRLRLGLSRVVLSPGARRHLLNYGWPGNVRELEHAIHRAVVLARATRAGDEVVLEEQHFALSEDVLPAPSAESFLALPACRNLRESTENFQREMIRQALAQNNHNWAASARALETDVANLHRLAKRLGLKD", - "output": "ATP binding ; DNA binding ; DNA-binding transcription factor activity ; phosphorelay signal transduction system" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MAHRPRWTLSQVTELFEKPLLDLLFEAQQVHRQHFDPRQVQVSTLLSIKTGACPEDCKYCPQSSRYKTGLEAERLMEVEQVLESARKAKAAGSTRFCMGAAWKNPHERDMPYLEQMVQGVKAMGLEACMTLGTLSESQAQRLANAGLDYYNHNLDTSPEFYGNIITTRTYQERLDTLEKVRDAGIKVCSGGIVGLGETVKDRAGLLLQLANLPTPPESVPINMLVKVKGTPLADNDDVDAFDFIRTIAVARIMMPTSYVRLSAGREQMNEQTQAMCFMAGANSIFYGCKLLTTPNPEEDKDLQLFRKLGLNPQQTAVLAGDNEQQQRLEQALMTPDTDEYYNAAAL", - "output": "2 iron, 2 sulfur cluster binding ; 4 iron, 4 sulfur cluster binding ; biotin synthase activity ; iron ion binding ; biotin biosynthetic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MMNKLYIGNLSPAVTADDLRQLFGDRKLPLAGQVLLKSGYAFVDYPDQNWAIRAIETLSGKVELHGKIMEVDYSVSKKLRSRRIQIRNIPPHLQWEVLDGLLAEYGTVENVEQVNTDTETAVVNVTYMTREEAKLAIEKLSGHQFEDYSFKISYIPDEEVSSPSPPHRAREQGHGPGSSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSEACRMILEIMQKEADETKLAEEVPLKILAHNGFVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVRGTIEACANAEIEIMKKLREAFENDMLAVNQQANLIPGLNLSALGIFSTGLSVLPPPAGPRGVPPSPPYHPFATHSGYFSSLYPHHHFGPFPHHHSYPEQETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEVIVPRDQTPDENEEVIVRIIGHFFASQTAQRKIREIVQQVKQQEQRYPQGVAPQRSK", - "output": "cytoplasm ; cytoplasmic stress granule ; cytoskeleton ; cytosol ; nucleus ; P-body ; mRNA 3'-UTR binding ; mRNA 5'-UTR binding ; N6-methyladenosine-containing RNA binding ; translation regulator activity, nucleic acid binding ; cold-induced thermogenesis ; CRD-mediated mRNA stabilization ; energy homeostasis ; mRNA transport ; negative regulation of translation ; nervous system development ; regulation of gene expression" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MVTRRRLHHPEVEQVSKRQKVDKAESKNKKHADVAAERGEQSTEDHEDESQDKKDKKVVGDNRDEDEEVSPNGQEAAEDNDDRKDKDAKEKDTETNDEGTEKSHTDVNDDDDDVDESKEEDAAAAVDITKEKKDEQESDNKTEEKKVQENEEEEEEDENKNDEDVEELGSTEPVDDEKKGLVKFEFDGVEYKFKERASVIEENEGKIEFRVVSNDNTRENMMVLTGLKNIFQKQLPKMPKEYIARLVYDRSHLSMAVIRKPLTVVGGITYKPFNKRQFAEIVFCAISSTEQVRGYGAHLMNHLKDYVRNTSDIRYFLTYADNYAIGYFKKQGFTKDITLDKKVWMGYIKDYEGGTLMQCSMLPRIRYLDAAKILLLQEAALRRKIRTISKSHVVHPGLECFNDIENIKPIDPMSIPGLKEAGWTPEMDELAQRPKRGPHYAAIQNILVELQNHAAAWPFLRPVNKEEVPDYYEFIKEPMDLSTMELKLENNKYEKMEEFIYDARLVCNNCRLYNGENTSYYKYANRLEKFFNNKVKEIPEYSHLID", - "output": "ADA complex ; chromosome, centromeric region ; cytosol ; nucleus ; SAGA complex ; SLIK (SAGA-like) complex ; histone crotonyltransferase activity ; histone H3K14 acetyltransferase activity ; histone H3K18 acetyltransferase activity ; histone H3K9 acetyltransferase activity ; lysine-acetylated histone binding ; transcription coregulator activity ; chromatin remodeling ; histone acetylation ; negative regulation of induction of conjugation with cellular fusion ; positive regulation of transcription elongation by RNA polymerase II" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MKAKLLILFCAFTATDADTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPLQLGNCSIAGWILGNPECESLFSQKSWSYIAETPNSENGTCYPGYFADYEELREQLSSVSSFERFEIFPKESSWPNHTVTKGVTASCSHKGRSSFYRNLLWLTEKNGLYPNLSKSYVNNKEKEVLVLWGVHHPSNIGDQRAIYHTENAYVSVVSSHYNRRFIPEIAKRPKVRGQEGRINYYWTLLEPRDTIIFEANGNLIAPWYAFALSRGFGSGIITSNASMDECDAKCQTPQGAINSSLPFQNVHPVTIGECPKYVRSTKLRMATGLRNIPSIQSR", - "output": "host cell plasma membrane ; membrane ; viral envelope ; virion membrane ; host cell surface receptor binding ; clathrin-dependent endocytosis of virus by host cell ; fusion of virus membrane with host endosome membrane ; fusion of virus membrane with host plasma membrane ; virion attachment to host cell" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENINNDEDPEGSVDPEGQGS", - "output": "CAF-1 complex ; chromosome, telomeric region ; ESC/E(Z) complex ; nucleus ; NuRD complex ; histone binding ; cell cycle ; chromatin remodeling ; DNA replication ; DNA replication-dependent chromatin assembly ; histone deacetylation ; regulation of DNA-templated transcription" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MTYSRNIFIPLTRACRNRCGYCTFRSDTPEPPLLEPEDVMGEVRRALSLGCTEALFTFGEDAHEFPGVRDKLESLGFGDMTDYTYHLCELTLDAGLLPHTNMGVIGYRELRMLKEVNASMGLMLESASPRLMETEAHRESPGKNPRLRIKMIEDAGRLRIPFTTGLLIGIGETIEERAESLLELRRIQDRYGHIQEIIIQNFRSKPGIPMENQREPSLLEMVKMVAAAKIMFPDVSIQVPPNLNRETGEIFLLAGADDWGGVSPISRDYVNPEAPWPEIDELKRITESAGFALEERLPVYRKFISREFLSPRVMERIEELYPRFIETL", - "output": "4 iron, 4 sulfur cluster binding ; ammonia-lyase activity ; iron ion binding ; transferase activity, transferring alkyl or aryl (other than methyl) groups ; cellular nitrogen compound biosynthetic process ; heterocycle biosynthetic process ; organic cyclic compound biosynthetic process ; organonitrogen compound biosynthetic process ; sulfur compound biosynthetic process ; water-soluble vitamin biosynthetic process" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MMKMRWLGAAIMLTLYASSSWAFSIDDVAKQAQSLAGKGYEAPKSNLPSVFRDMKYADYQQIQFNSDKAYWNNLKTPFKLEFYHQGMYFDTPVKINEVTATTVKRIKYSPDYFNFGNVQHDKDTVKDLGFAGFKVLYPINSKDKNDEIVSMLGASYFRVIGAGQVYGLSARGLAIDTALPSGEEFPRFREFWIERPKPTDKRLTVYALLDSPRATGAYRFVIIPGRDTVVDVQSKVYLRDKVGKLGVAPLTSMFLFGPNQPSPTTNYRPELHDSNGLSIHAGNGEWIWRPLNNPKHLAVSSYAMENPQGFGLLQRGREFSRFEDLDDRYDLRPSAWITPKGDWGKGKVELVEIPTNDETNDNIVAYWTPDQLPEPGKEMNFKYTLTFSRDEDKLHAPDNAWVLQTRRSTGDVKQSNLIRQPDGTIAFVVDFVGADMKKLPPDTPVAAQTSIGDNGEIVDSNVRYNPVTKGWRLMLRVKVKDAKKTTEMRAALVNADQTLSETWSYQLPANE", - "output": "periplasmic space ; carbohydrate binding ; catalytic activity ; glucan biosynthetic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MAIFTPELWLICFAVTVYIFDYIYTKYLMYKLGAKPITHVIDDGFFGFRLPFLITLANNQGRLIEFSVKRFLSSPHQTFMNRAFGIPIILTRDPVNIKAMLAVQFDEFSLGLRYNQFEPLLGNGIFTSDGEPWKHSRIMLRPQFIKSQVSHVNRLEPHFNLLQKNITAQTDNYFDIQTLFFRFTLDTATEFLFGQSVHSLNDGENSLQFLEAFTKSQAILATRANLHELYFLADGIKFRQYNKMVQDFSQRCVDKVLNMSNSEIDKLDRYFFLYEMVKITRNPQVLRDQCLNILLAGRDTTASLLSFAFFELALNEPIWIKLRTEVLHVFQTSLELITFDLLKTKCPYLQAILHETLRLYPSVPRNARFSKKNTTLPHGGGVDGMSPILIKKGQPVAYFICATHVDEKFYTKDALIFRPERWCEEPLIKKNLAWSYLPFNGGPRICLGQQFALTEASYVLTRLAQCYTKISLQPNSFEYPPKKQVHLTMSLLDGVHVKISNLSIS", - "output": "membrane ; heme binding ; iron ion binding ; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MADKELKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQAGGFGFIISDWNMPNMDGLELLKTIRADSAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKLNKIFEKLGM", - "output": "cytoplasm ; metal ion binding ; archaeal or bacterial-type flagellum-dependent cell motility ; chemotaxis ; phosphorelay signal transduction system" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MTNHKLIEAVTKSQLRTDLPSFRPGDTLRVHVRIIEGTRERIQVFEGVVIKRRGGGVSETFTVRKISSGVGVERTFPLHTPKIEKIEVKRRGKVRRAKLYYLRSLRGKAARIQEIR", - "output": "ribonucleoprotein complex ; ribosome ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MGKLMVPKILVTNDDGVYSTGLKAAFDSVSDLGEVTISAPAVQQSGVGRSISIFEPLRITKTDVGGIPAYAVGGTPTDSVILGVFTILKAMPDLVLSGFNIGENISTDTITTSGTIGGALEAASYGVPAIAASMQVLDEGQKFDDPRDYQRERFEAGIKVVNRIARNVLKRGMPENVDLLNINIPFHAEEDTPIEITRLARKIFKTDVEERRDPRGRPYYWIAGDLIREEEEGTDVHAIMQKGHVSITPISLDSTARIDFSEIERYL", - "output": "cytoplasm ; metal ion binding ; nucleotide binding ; XMP 5'-nucleosidase activity" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MLGFFAVYGNPITHSKSPFLHNYAFTKLGLSGYYSRILLDKGANLRQNFLSNGLSGANITLPFKEEAFNQCDEVRGVAQNIGACNTWVLEDKNHLVGYNTDAQGFYECIKEYKIKNALIIGAGGSAKAVAMILQSHNIPTTLINRSVQNLSFFVHKGFECYVNSEFKPTCSYDILINTTSAGLNDNLLPCDESQLKELCSCGKYAFDLIYGKCTPFLALAQSFHLSCSDGKEMLINQAALSFELFCKQKYNKGNLEIQRIASFMNEIL", - "output": "NADP binding ; shikimate 3-dehydrogenase (NADP+) activity ; amino acid biosynthetic process ; aromatic amino acid family biosynthetic process ; chorismate biosynthetic process ; shikimate metabolic process" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MSPCENDTPINWKRNLIVAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGIVFSITFLFSAIASPFWGGLADRKGRKLMLLRSALGMGIVMVLMGLAQNIWQFLILRALLGLLGGFVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPMAGGLLADSYGLRPVFFITASVLILCFFVTLFCIREKFQPVSKKEMLHMREVVTSLKNPKLVLSLFVTTLIIQVATGSIAPILTLYVRELAGNVSNVAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSYVQTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWNSLRRRRIPQISN", - "output": "plasma membrane ; transmembrane transporter activity ; response to antibiotic" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MKNNIVIITGITASGKSELCDNLREKYGNISIINCDSKQVYKEIPIITAQPLKQEEFYKLYGYVSAKENYSVGLWLEDLEKEVNHALENAQIPIITGGSGLYISSFIKGLSSMPQISQEVRKNVSELRKNLSKEEFYKLVLSKDSKVQDKICINDSHRLSRALEVITETGKTIFVWQENRQPPLFDNFKIYTILPKREDVYQKINSRFIKMIENGAIDEVKKLLSMNLAPNLPAMKAHGVPEIVKYLKGEITLDEAIQIAQTNTRHYAKRQYTWFKNQFPSSEVIDCANELTALEIF", - "output": "ATP binding ; tRNA dimethylallyltransferase activity ; tRNA processing" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MPIYDKSPRPQEFAAVDLGSNSFHMVIARVVDGAMQIIGRLKQRVHLADGLGADNKLSEEAMERGLSCLSLFAERLQGFSPSSVCIVGTHTLRQAQNAADFLKRAEKVIPYPIEIISGNEEARLIFMGVEHTQPEKGRKLVIDIGGGSTELVIGENFEPRLVESRRMGCVSFAQLYFPGGVINKENFQRARMAAAQKLETLTWQYRIQGWNVAMGASGTIKAAHEVLLALGEKDGFITPERLDKLKSEVLKHRSFNALSLPGLSEERKAVFVPGLAILCGVFDALAIRELRLSDGALREGVLYEMEGRFRHQDVRSRTAKSLANQYNIDREQARRVLETTMQMYEQWQAQQPKLAHPQLEALLRWAAMLHEVGLNINHSGLHRHSAYILQHSDLPGFNQEQQMMMATLVRYHRKAIKLDDMPRFTLFKKKQYLPLIQLLRLGVLLNNQRQATTTPPTLRLTTDDSHWTLCFPHDWFSQNALVLLDLEKEQQYWEAVTGWRLNIEEESSPEIAA", - "output": "plasma membrane ; exopolyphosphatase activity ; phosphorus metabolic process" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MKVVKFPWLAHREESRKYEIYTVDVSHDGKRLATGGLDGKIRIWSIDSILRCMELESLTPEIPLPQDLQMPLCSMSRHTGSITCVKFSPDGKYLASGSDDRILLIWALDEEQSSQPAFGSEHEREHWTVRKRLVAHDNDIQDICWAPDSSILVTVGLDRSVIVWNGSTFEKLKRFDVHQSLVKGVVFDPANKYFATTSDDRTMKIFRYHKTGDISFTIEHIITEPFKESPLTTYFRRPSWSPDGQHIAVPNATNGPVSSVAIVNRGTWDTNVSLIGHDAPTEVARFNPRLFERNAGVKQKKDDDPENALVGQNDDKVHHFDKNIDSVVATAGQDKSLAVWSTSRPRPILVAFDIANKSITDMSWNPDGSLLFVASLDSSITLFKFENNELGKPIPLEKNMEQLYRYGVDKDSLDFPESINQLLLEDQTKSFKHTKISTSKLGENHPTLATNSASNQKDNNDASVSRSEHINILIPKRKKDAILNKAVTLKSGKKRVAPTLISTSSSSPFSNGIKKPTLDSKRIENNVKSSTKTINSKNTLLNVPEGVEKKISISSFPLPRLGIHSLIMGTKERSAWKISNSELENDDADNAGGKGSDGTSNSIDDIAVLSEEENDFHRMTLNAKLTQEKIWSEEPTTRCLLQSDVIPDTDVVVLEGGSLDDIAVLEIRNGVERSIQFDSEALLDNPTRILGYQGGKRTIETFIPEVIICAIGSKDCKCWCLASANGSIYILSYNGQQRIPKICLGHKVIKMVTSSKYLLVLTERGLFFAWDLLDLKLVLRNVPILPILNGQPIHGNKVRINKVIKCFRLDGSSCDLLLEVGDPKNVYKWTKDLGCWSLYK", - "output": "chromosome, centromeric region ; HIR complex ; nucleus ; identical protein binding ; transcription corepressor activity ; chromatin organization ; chromatin remodeling ; negative regulation of chromatin organization ; negative regulation of transcription by RNA polymerase II ; negative regulation of transcription by RNA polymerase III ; nucleosome assembly ; transcription elongation by RNA polymerase II" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MQMMSLEKEAAMETKTAEQRSLDYRNAMARLGAAVNIVTTDGAAGRAGFAATAVCSVSDNPPTLLVCLNRNASAYKVVKANGVICINTLAAHHEVLSTLFGGKTPAEERFAAGSWGVLETGAPVLEDALVSFDCRIREAHDGGTHDILICTVVDMKINAGDEALMYFNRRYRVL", - "output": "FMN binding ; FMN reductase (NAD(P)H) activity ; FMN reductase (NADH) activity ; riboflavin reductase (NADPH) activity ; nitrogen utilization ; uracil catabolic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MTAPSQVLKIRRPDDWHLHLRDGDMLKTVVPYTSEIYGRAIVMPNLAPPVTTVEAAVAYRQRILDAVPAGHDFTPLMTCYLTDSLDPNELERGFNEGVFTAAKLYPANATTNSSHGVTSVDAIMPVLERMEKIGMPLLVHGEVTHADIDIFDREARFIESVMEPLRQRLTALKVVFEHITTKDAADYVRDGNERLAATITPQHLMFNRNHMLVGGVRPHLYCLPILKRNIHQQALRELVASGFNRVFLGTDSAPHARHRKESSCGCAGCFNAPTALGSYATVFEEMNALQHFEAFCSVNGPQFYGLPVNDTFIELVREEQQVAESIALTDDTLVPFLAGETVRWSVKQ", - "output": "dihydroorotase activity ; zinc ion binding ; 'de novo' UMP biosynthetic process ; pyrimidine nucleobase biosynthetic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MSKTVKVAVTGAAGQIGYSLLFRIASGQMFGADTAVEIQMLELEAAIPAAKGVIMELEDCAFPLLQKVTVSSDLDTAFKEINWALLVGSVPRKAGMERGDLLKINGGIFVNQGKAIEKNAASDVRILVVGNPCNTNCLIAMNNAKGISQDRWFAMTKLDENRAKSQLASKAGVPVKEVTHLGIWGNHSATQYPDFYNTKISGKPVTDVISDHEWLKGDFIKNVQQRGAEIIKARGASSAASAANGVVDTVRGIITPTAPGDCFSAAVVSDGSYGAEKGLIFGFPLKSDGKKVEIIQGISLNDFAKEKFKITHEELVSERNEVKEML", - "output": "L-malate dehydrogenase activity ; malate metabolic process ; NADH metabolic process ; oxaloacetate metabolic process ; tricarboxylic acid cycle" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MPVAPHELRDTIKSRDLGLFQCIDLLKQHNDNIGVHHQLVQKLYSYSYDELEFFIPQFIQLLVNFETDSMALEDFLLHYCNQFPHFSLIVFWYLQAFLFELRNEPKSYSFQTVRKFINKLQNILFNVETSFHIRGPEFRENMQPALILCGSVASAFSSPLVNEYALPIVRSQGKQQKSFVFKLASFQKSLTRNLTMKNQRLSADAITPVISDDDSKVSNRIQESQRLKTKYSKKKISAALQLDDSENYTTDEEELGYVQTLSRPKIREMKYTEVEENLKINTIIRSKKNRSKTTVNSISFFSDTDQSASMEEYNRSAQSLPELVRTRSRLDLYSSESEAALGTSRNSAELIISKKKFMGSEVKTRPYKELLKILQVNYSKKETSFIMSLQNISLRLSSVPKVARLSALRAELSIINESILPSEIDIPQLLPVTSNKNKKFHKILKLNINEACVLNSAERVPYLLLIEYLSDEIDFNPFSDQNQKIINDCVRKPEVKPNDQISGDDDTSVVSSIQEEMFLDNNASENYNEDGDLGEISLLHSRSSSRDWAKSTPGSPVARSSQEDEKFYGNVSSTTGGTIESSVLADQMRIASLMLQQLESSGQSNTQQFVSIRNRIIESMISLQDQFDFIDYETLKELKTDEQDAGKRKLENDFKLAEDWNEKKHRIRKSSIYGHLENWDLCSVIVKNGDDLPQEAFACQLISLISNIWKKHKVDFWTKRMKILITSANAGLVETITNAMSIHSIKKSLTELSIENGENAKGRIFTLKDYFQKLYGSVDSSKYVKAQENFAISLASYSIICYVLQIKDRHNGNIMLDHEGHIIHIDFGFLLSNSPGSVGFEAAPFKLTSEYVEVLGGLESKAYLKFVDTCKNCFKALRKEWGQIVSIVELMQKGSSLPCFNNGDNTSVLLQQRLQLHLSDEEIDSFIEVYLIEKSVGSMYTRLYDQFQMITQGIYS", - "output": "cytoplasm ; membrane ; nucleus ; trans-Golgi network ; 1-phosphatidylinositol 4-kinase activity ; ATP binding ; endocytosis ; filamentous growth of a population of unicellular organisms ; Golgi to plasma membrane protein transport ; microlipophagy ; phosphatidylinositol phosphate biosynthetic process ; phosphatidylinositol-mediated signaling ; positive regulation of autophagosome assembly ; positive regulation of Golgi to plasma membrane protein transport ; positive regulation of protein secretion ; single-species biofilm formation on inanimate substrate" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MSELLSFALFLASVLIYAWKAGRNTWWFAATLTVLGLFVVLNITLFASDYFTGDGINDAVLYTLTNSLTGAGVSKYILPGIGIVLGLTAVFGALGWILRRRRRHPHHFGYSLLALLLALGSVDASPAFRQITELVKSQSRDGDPDFAAYYKEPSRTIPDPKLNLVYIYGESLERTYFDNEAFPDLTPELGALKNEGLDFSHTQQLPGTNYTIAGMVASQCGIPLFAPFEGNASASVSSFFPQNICLGDILKNSGYQNYFVQGANLRFAGKDVFLKSHGFDHLYGSEELKSVVADPHYRNDWGFYDDTVLDEAWKKFEELSRSGQRFSLFTLTVDTHHPDGFISRTCNRKKYDFDGKPNQSFSAVSCSQENIATFINKIKASPWFKDTVIVVSSDHLAMNNTAWKYLNKQDRNNLFFVIRGDKPQQETLAVKRNTMDNGATVLDILGGDNYLGLGRSSLSGQSMSEIFLNIKEKTLAWKPDIIRLWKFPKEMKEFTIDQQKNMIAFSGSHFRLPLLLRVSDKRVEPLPESEYSAPLRFQLADFAPRDNFVWVDRCYKMAQLWAPELALSTDWCVSQGQLGGQQIVQHVDKAIWKGKTAFKDTVIDMARYKGNVDTLKIVDNDIRYKADSFIFNVAGAPEEVKQFSGISRPESWGRWSNAQLGDEVKIEYKHPLPKKFDLVITAKAYGNNASRPIPVRVGNEEQTLVLGNEVTTTTLHFDNPTDADTLVIVPPEPVSTNEGNILGHSPRKLGIGMVEIKVVEREG", - "output": "plasma membrane ; phosphatidylglycerol-membrane-oligosaccharide glycerophosphotransferase activity ; sulfuric ester hydrolase activity ; glucan biosynthetic process" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MAAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVAAAVEELKTLSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDGTGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALIRVASKLADLRGQNEDQNVGIKVALRAMEAPLRQIVLNCGEEPSVVANTVKGGDGNYGYNAATEEYGNMIDMGILDPTKVTRSALQYAASVAGLMITTECMVTDLPKNDAADLGAAGGMGGMGGMGGMM", - "output": "cytoplasm ; ATP binding ; ATP-dependent protein folding chaperone ; isomerase activity ; unfolded protein binding ; protein refolding" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MKKGLIAKKLGMTQIFAEDGKRIPVTVVQAGPCVVLQKKTSATDGYDAIQVGFLSQEARKVTKPMLGHIKAAGQGAFAHIREFRLDDVDRYNVGDVISADAFEVGEYIDVTGTSIGKGFQGVIKRWGFRGGRSSHGSCFHRAPGSIGSSAYPSRVFKNKKMPGQLGNERVTVQRLQVVRVDAADNILLIKGAIPGAKNGIVLVKDTVKPR", - "output": "cytosolic large ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MNDREPNQKESKESVNDAVPRARKVDDQQLRVSKIRDGTVIDHLTAGEALNVLAILGIDGSSGEGVSVGMNVISDRLGRKDIVKVEDRELSQSEVDVLAVIAPEATINIIRDYAVVDKKRIERPTAVTGLLFCPNRNCITNANEPINTRFIVLDEGLQCDYCGSIVRESEVPTYLDVA", - "output": "aspartate carbamoyltransferase complex ; metal ion binding ; 'de novo' pyrimidine nucleobase biosynthetic process ; pyrimidine nucleotide biosynthetic process" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWKEENGTWEKTHEHSGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYIKKFASGGCDNLIKLWREEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASGNMWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCISDVNKGQGSVSASITEGQQNEQ", - "output": "COPII vesicle coat ; cytosol ; endoplasmic reticulum membrane ; GATOR2 complex ; lysosomal membrane ; nuclear envelope ; nuclear pore ; nuclear pore outer ring ; protein-containing complex ; identical protein binding ; structural molecule activity ; COPII-coated vesicle budding ; COPII-coated vesicle cargo loading ; endoplasmic reticulum to Golgi vesicle-mediated transport ; mRNA transport ; positive regulation of TOR signaling ; protein exit from endoplasmic reticulum ; protein import into nucleus ; protein localization to plasma membrane" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MSRVIVKGLPIYLKEDRLRDLIEKRLTQKHQSTDVQSYLSDVKLMKNRDGESRRFAFIGFRDEEDAFDCVNYFNGTFVDTSKIEVSMAKSFADPRVPQPMREKRREALKRLREREELLLADKKDSQKKQKSDSNNDGGKKHDIDAEIAKNKQLQEFINTMKPSSQVTSWETVQSSKTQGEDEEAADDEVGEMSSNPLLSQALALKGNSRDADEDTDMFKLPGNESDDEYVSLNGGSNNANTDEPEPQMMSLDTFDTAGPTSTDDMAKDEAVSDLDWLKNRRVRIKDGADTPVSKQQQQPDTEQQQPEETEVETSQESEEEKSLKKIRETGRLFLRNILYTATEDDFRKLFSPYGELEEVHIAVDTRTGQSKGFAYVLFKNADNAATAFVELDKQIFQGRLLHILPADAKKSHKLDEFDLKNLPLKKQRELKRKANSAQQTFSWNSLYMNQDAVLSSVADKLGMKKSELIDAENSSSAVKQALAEASVIGDVRKFFETRGVDLTKFAQLKNSERDDRVILVKNFPYGTTREEIAELFLPFGKLQRLLLPPSGTIAILQFRDVPAARAAFSKISYKRFKDGIIYLEKGPSDCFTRDAQGDELVESETDIQKATAKEAKISGADLLEAQSLPAADKDDHDDDDDDDDVQAGPTVSIFIKNLNFSTTSQQLTEKFKPFNGFVVAQVKTKPDPKQPGKTLSMGFGFAEFKTKEQANAVISAMEGTILDGHKLQLKLSHRQGTSTTNASSKKKKKNQGKIIVKNLPFEATRKDVFELFSSFGQLKSVRVPKKFDKSARGFAFVEFLLPKEAENAMDQLQGVHLLGRRLVMEFVEQDPEDVEQQIEKMTRKVKKQVNTTKIANMRNSGKRKIDLDEDDENDGLQG", - "output": "nucleus ; ribonucleoprotein complex ; RNA binding ; rRNA processing" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MFAVIKTGGRQYRVVPDDVLEVGKIEGEVGTIVQLGEVLMLGGDTPQLGLPTIAGASVAAEVLDHKRGPKVISFKKRRRKNSKRKRGYRDEITVLRITEILADGKKPSVGPRPKRVKAEPAPAADAAE", - "output": "cytoplasm ; ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPSEPHWAFCYSMLHKVSRSFGLVIQQLGPQLRDAVCIFYLVLRALDTVEDDTSISTEVKVPIVMAFHCHIYDNDWHFSCGTKEYKVLMDEFHHVSNAFLDLGSSYKEAIEDITMRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGLSKLFHASGAEDLATDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVDKLEDLKYEENSGKAVQCLNDMVTNALLHVEDCLKYMSDLRDPAIFRFCAIPQIMAIGTLALCYNNIQVFRGVVKMRRGLTAKVIDRTNTMSDVYGTFFDFSCMLKSKVDNNDPNATKTLSRLEAIQKICKNSGALTTKRKSYIIENESGYNSTLIIILFIILAILYAYLSSNLPNSL", - "output": "endoplasmic reticulum membrane ; farnesyl-diphosphate farnesyltransferase activity ; squalene synthase activity ; isoprenoid biosynthetic process ; response to jasmonic acid" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MHDKILILDFGSQVTQLIARRVREAHVYCEIHPNDVSDDFVREFAPKAVILSGSHASTYEDHQLRAPQAVWDLGVPVLGICYGMQTMAVQLGGKVEWSDHREFGYAEMRAHGHTRLLDGIEDFTTAEGHGMLKVWMSHGDKVAELPPGFALMASTPSCPIAGMADEARGYYAVQFHPEVTHTVKGRQIIERFVLQIAGAKPDWIMKNHIEEAVAKIREQVGDEEVILGLSGGVDSSVAAALIHRAIGDQLTCVFVDHGLLRLNEGKMVLDMFEGRLHAKVVHVDASDQFLGHLAGVTDPEAKRKIIGREFVEVFQAEAKKLSKAKWLAQGTIYPDVVESGGTKTKKATTIKSHHNVGGLPETLGLKLLEPLRDLFKDEVRELGVALGLPPEMVYRHPFPGPGLGVRILGEVKREYAELLRRADAIFIEELRNTTATAQDAAAGLCGEADVGKSWYDLTSQAFAVFLPVKSVGVMGDGRTYDYVTSLRAVQTTDFMTAHWAHLPYALLGRASNRIINEVRGINRVVYDISGKPPATIEWE", - "output": "ATP binding ; GMP synthase activity ; glutamine metabolic process" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MQVILLQRVAKLGQMGEVVNVKDGYARNYLLPQGKALRANESNIKSFEARKAQLEAQNLETKKEAAAVAEKLDGQSFVVIRSASDAGALYGSVTTRDAADAATEAGFTVDRGQVVLDRPIKELGLHTVTVTLHPEVAVKITLNVARSPEEAELQASGKSIQELAAEAEAAADFEIAELFDEIGAASQDE", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MSRLRIFADTNPATPEFDSRDGDAIASELKKIGVTFERWHASAPVEPGATPEQVMDAYRADIDRISAERGFKTVDVVSIAPDNPKREEMRAKFLDEHFHKEDEVRFFVAGSGLFTLHVDAKVYEIECVKDDLIAVPDSTLHWFDMGPEPHFVAIRFFTEPDGWVGHFTGTEIAKQFPRYAPEKPHKAS", - "output": "acireductone dioxygenase (Ni2+-requiring) activity ; acireductone dioxygenase activity ; iron ion binding ; nickel cation binding ; L-methionine salvage from methylthioadenosine ; L-methionine salvage from S-adenosylmethionine" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "GVDSSFLRL", - "output": "extracellular region ; neuropeptide signaling pathway" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MARIGESVDLLKCSFCGKSQKQVRKLIAGPRVYICDECIELCNEIIEEELTEVTEADQTELPRPKQVYDHLQEYVIGQEPAKRSLAVAVYNHYKRIRAGVSGHTLSLAGAEGDEEAIEVAKSNILLVGPTGSGKTYLAQSLAKKLDVPFAVADATSLTEAGYVGEDVENILLKLIQAADFDLKKAEQGIIYIDEIDKISRKSENPSITRDVSGEGVQQALLKILEGTVASVPPQGGRKHPQQEFLHIDTTNVLFIVAGAFAGLEEIVQQRTGKKGIGFGAPIRDTADVDIAGQVQPEDLLKFGLIPEFIGRLPVVATLSKLSVADMVRILTEPRNALVKQYRKLFQLDGVELTFDPQALEAIAELALERGTGARGLRAILEDILMPVMFDLPGREDVAAVLVTEDAVAKLADPEIFTHEMIEAERRRHKSA", - "output": "ATP binding ; ATP hydrolysis activity ; ATP-dependent protein folding chaperone ; protein dimerization activity ; unfolded protein binding ; zinc ion binding" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MDPPSVRSKITEIEGDLFHAPDGAALIHACNCQGSWGKGIAKAFKDKYPAAFAIYRSHCQNLLSSPRYMFEPDLQSEESHARSSRDVRLPEGTALIIPPQKRDSEANGKKHWIICLFTSRGFGRAVSPPDVIVRNTELAVADMTRQLAELQTDQSSREESVGELWSCRFNAGLFGVPWERSRRVLEDAGLEVTVVRPHGG", - "output": "phosphoprotein phosphatase activity ; peptidyl-glutamate ADP-deribosylation" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MAKKEVSASKPGNTKKDNVLLKKRKQQAVEKEEAEKEKEEGVSEDEFNVQGLIDPESDSDDEGAAAAEEEEEEEEQQQDVKELDLDKGEVISSDSDAEDFDSEEELNKLLGEEDDPSDYSSVGFSDEPKEDGDEQDEQDAFAAADAATDDDAFGDVKLKNLSITDPSKLEVRTKFSDGTPRIIKPEIEPVYDSDDSDAENFNTIGNIPISAYEEMPHIGYDINGKRIMRPAKGSALDQLLESIDLPQGWTGLLDQNTGAPLKITDEELELIRKIQQQENTDENINPYEPLNDWFTKNQEVMPLTAVPEPKRRFVPSKHEAKRVMKIVKAIREGRILTPEKAKELKEKETEEMNYDLWQNESEVPDHIMNLRAPKLPPPTNEESYNPPEEYLLNEEEKQKWLEQDPVDRERNFIPQKYSSLRLVPGYQDSVRERFERSLDLYLAPRLRKNKLNIDPESLIPELPSPKDLRPFPIKCSTVYEGHTGKIRTLSIDPQGLWLATGSDDGSVRIWEVLTGRQVFKAQLVNKEHNGEDHIESLEWNPNAQTGILAVCAGENIYLLVPPIFGFEIENTGKLRIESGWGYDTFGNTKQDLKVKGEDTKGDLDDDEEEEEEEEDDDDDEGQGKVKAHNSTAPAKKDVAKWINPNSSQQAMGISAIIQCRRTVKKISWHRKGDYFVTVSPDSKNTAVLIHQLSKHLSQSPFRKSKGVIMDAKFHPFKPQLFVASQRQIKIYDLAQQTLLKKLLPGVRLLSTIDLHPRGDNLLAASYDKRVLWHDLDLAATPYKTLRYHEKAVRQIKYHKGSLPLFASASDDGIIHVFHGTVYDDLMTNPLLVPLKKLSGHKVINQIGVLDIVWHPKEAWLFSAGADGTARLWTT", - "output": "nucleolus ; nucleoplasm ; preribosome, large subunit precursor ; ribonucleoprotein complex binding ; maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) ; maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MSFDIAKYPTLALVDSTQELRLLPKESLPKLCDELRRYLLDSVSRSSGHFASGLGTVELTVALHYVYNTPFDQLIWDVGHQAYPHKILTGRRDKIGTIRQKGGLHPFPWRGESEYDVLSVGHSSTSISAGIGIAVAAEKEGKNRRTVCVIGDGAITAGMAFEAMNHAGDIRPDMLVVLNDNEMSISENVGALNNHLAQLLSGKLYSSLREGGKKVFSGVPPIKELLKRTEEHIKGMVVPGTLFEELGFNYIGPVDGHDVLGLITTLKNMRDLKGPQFLHIMTKKGRGYEPAEKDPITFHAVPKFDPSSGCLPKSSGGLPSYSKIFGDWLCETAAKDNKLMAITPAMREGSGMVEFSRKFPDRYFDVAIAEQHAVTFAAGLAIGGYKPIVAIYSTFLQRAYDQVLHDVAIQKLPVLFAIDRAGIVGADGQTHQGAFDLSYLRCIPEMVIMTPSDENECRQMLYTGYHYNDGPSAVRYPRGNAVGVELTPLEKLPIGKGIVKRRGEKLAILNFGTLMPDAAKVAESLNATLVDMRFVKPLDEALILEMAASHEALVTVEENAIMGGAGSGVNEVLMAHRKPVPVLNIGLPDFFIPQGTQEEMRAELGLDAAGMEAKIKAWLA", - "output": "1-deoxy-D-xylulose-5-phosphate synthase activity ; magnesium ion binding ; thiamine pyrophosphate binding ; 1-deoxy-D-xylulose 5-phosphate biosynthetic process ; terpenoid biosynthetic process ; thiamine biosynthetic process" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MKNFDKFSTNEEFSSVYKVGKKWHCEGVIIFYLNSYEKKIAVVASKKVGKAVVRNRSKRILRALFAKFERYLQDGKYIFVAKNEITELSFSRLEKNLKWGLKKLECFK", - "output": "ribonuclease P activity ; tRNA binding ; tRNA 5'-leader removal" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MKFVDEATIEVIAGKGGNGVASFRREKFIPKGGPDGGDGGRGGSIYAVADRNINTLIDFRYARLHRAKNGENGRGSDQYGAAAPDITLRVPVGTVVHDADTGEVLFDLDRHDQKVTLAAGGAGGMGNIHFKSSTNRAPRQWTPGKEGEQRRLRMELKVLADVGLLGLPNAGKSTLISRISNARPKIADYPFTTLHPNLGVVRTSPSRSFVVADIPGLIEGASEGAGLGHLFLRHLARTRVLLHLVDISSPDPEADPIEQAVVDANAIVEELRRYDPELAAKPRWLVLNKLDMVPDAQDAQQRFCAEFGWTGPVFAISGLNGEGTQDLIWALQDYLDAEKRKDQDAQDQADGTYVFEDPRFDASRGGAAPATPPGGDE", - "output": "cytoplasm ; GTP binding ; GTPase activity ; magnesium ion binding ; ribosome biogenesis" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MKVGVVGASGYVGGETLRLLVNHPNVEITMVTSRQHVGEYLHRVQPSLKGFTDLTFSELDYDKLTDKCDLVFTAVPHGTATEIVKALYDRGIKIIDLSADYRLHDQDAYDKWYGWEHPHPDYLNKSVFGVPELHREEIKKAQLVSCPGCMAVTSMLALAPLIRNNIIDTDHIVVDSKIGSSGAGSGSGTAHAMRAGVIRPYKPAKHRHTGEIEQELSEIAGKKIHVSMSPHAVDVVRGILCTNHTFMQKDMEEKELWKLYRQTYGEEKFVRLIRDKKGLYKFPDPKFLVGSNFCDIGFDLDEDNNRLIALSASDNLMKGAAGSAIQNMNVMCGFDEMDGLRYTPLTPV", - "output": "cytoplasm ; N-acetyl-gamma-aminoadipyl-phosphate reductase activity ; N-acetyl-gamma-glutamyl-phosphate reductase activity ; NAD binding ; NADP+ binding ; protein dimerization activity ; arginine biosynthetic process via ornithine ; lysine biosynthetic process via aminoadipic acid" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MWLKPEEVLLKNALKLWLMERSNEYFVLQRRRGYGEEGGGGLTGLLVGTLDSVLDSTAKVAPFRILHQTPDSQVYLSIACGANREEITKHWDWLEQNIMKTLSVFDSNEDITNFVQGKIRGLIAEEGKQSFAKEDDPEKFREALLKFEKSFGLPEQEKLVTYYSCSYWRGRVPCQGWLYLSTNFLSFYSFLLGSEIKLIISWDAISKLEKTSTVILTESIHVCSQGENHYFSMFLHINETYLLMEQLANYAIKRLFDKETFDNDPVLDDPLQITKRGLEYRAHSEQFKAFFRLPKEETLKEVHECFLWVPFSHFSSHGKMCISENYICFASQDGNLCSVIIPLREVLAIDKTDDSNRSVIISIKGKTAFRFSELKDFEQLVAKLRLKCRAASTQDDVSTEVAVSSDSTGPSENFEEQPLTCPKECSKTVNTEALMTVFHPQNLENLDSKMLKEKMKEQSWNILFSECGRGVSMFRTKKTRDLVVRGIPETLRGELWMLFSGAVNDMATNPGYYAEVVEQSLGTSNLATEEIERDLRRSLPEHPAFQSDTGISALRRVLTAYAYRNPKIGYCQAMNILTSVLLLYAKEEEAFWLLVAVCERMLPDYFNRRIIGALVDQAVFEELIRDHLPQLTDHMTDMTFFSSVSLSWFLTLFISVLPIESAVNVVDCFFYDGIKAILQLGLAILDYNLDKLLTCKDDAEAVTALNRFFDNVINKDSPLPSNVQQGSNISNEKSDHTKVDITDLIKESNEKYGSIRYEDIHSMRCRNRLYVIQTLEETTKQNVLRVVSQDVKMSLQELDELYVIFKKELFISCYWYLSCPGLKHHDPSLPYLEQYQIDCQQFRVLYHLLSPWAHSANRDSLALWTFRLLDENSDCLINFKEFSSAIDIMYNGSFTDKLKLLFKLHIPPAYTEVMSKTSSKGDELSTEELLYFSQLQVSKPADEKETESGRNSPEKGKGKIDIQAYLSQWQDELLKKEETIKDLPRMNQSQFIQFSKTLYNLFHEDPEEESLYQAIAIVTNLLLRMEEVGRKLHSPASSASTARDSGPSEGNAESSVKKDLPSPREEHQWSFAFEQILASLLNEPALVRFFERPLDLKAKLENAKSSQLRSRTKM", - "output": "cytosol ; calcium ion binding ; GTPase activator activity ; activation of GTPase activity ; glomerular filtration ; vesicle-mediated transport" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MSFLKTSDPAVYNAIMQETTRLKETIDLIASENYTSKAVLEAQGSVFTNKYAEGYPGKRYYAGCEYADAVEELAIDRAKTLFHAEHANVQPHSGAQANMAAYFAMVKPGDTIMGLTLSHGGHLTHGSKVNFTGKLYHVIEYGLNAETERIDYDNLEKLAMEHRPRMIVTGASAYPRILDFERFRAICDKVDAKLMVDIAHIAGLVAAGLHPSPVPYADVVTSTSHKTLRGPRGGFILCKEQYAKAIDQAVFPVMQGGPLMQVVAAKAVAFQEAMQPGFVTYQKKTLENTQVMAEELRKLGLRLVSGGTDNHLVLVDLSPIGVNGYDAQLALRRAGIVINRNTVPFAENQTANVPAGIRLGCPAATSRGFGPAEIRQTVGWIGKVLKNIGNEDVEKQVLAEVIHLCRKFPVPGIDI", - "output": "cytoplasm ; glycine hydroxymethyltransferase activity ; pyridoxal phosphate binding ; glycine biosynthetic process from serine ; tetrahydrofolate interconversion" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MSMRSQYCGLVTEELLGQSVSLCGWVSRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFKAAEGVRNEFCLQIKGVVRGRPEGTTNAALKSGKIEVLCHELIVLNPSITPPFQLDDDNLSETTRLTHRVLDLRRPQMQHNLRLRYRVAIEARKYLDSLGFIDIETPMLTKSTPEGARDYLVPSRTNPGQFFALPQSPQLFKQLLMVANFDRYYQIVKCFRDEDLRADRQPEFTQIDCETSFLSEQEIRDLFEDMIRHVFKETIGVTLDEKFPVMLYSEAMRRFGSDKPDLRVKLEFTDLTDAVRDVDFKVFSTPANTKDGRVAAIRVPKGGELSRGDIDSYTEFVRIYGAKGLAWIKVNEVAKGRDGLQSPIVKNLHDEAVKAIIERTGAQDGDIIFFAADRAKVVNDSLGALRLKIGHSEFGKANGLVETGWKPLWVVDFPMFEYDEEDNRYVAAHHPFTSPKDEHLEYLETDPARCLAKAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKINAEEAQAKFGFLLDALQYGAPPHGGIAFGLDRIVTMMAGADSIRDVIAFPKTQRAQCLLTQAPSEVDERQLRELHIRLRQPEPKV", - "output": "cytoplasm ; aspartate-tRNA ligase activity ; aspartate-tRNA(Asn) ligase activity ; ATP binding ; nucleic acid binding ; aspartyl-tRNA aminoacylation" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MSALTESFGPVPSAKSKPPAARKPWYKLLYLQVLVAIVLGVLLGWLSPHIATNEWVKALGDGFVKLIKMVIAPIIFCTVVSGIAHIQDARKVGRVGVKALLYFEVVSSFALLIGLVVGNVVQIGHGLGATGDAAAVSKYVKQAEAQHSVDFVLNIIPDSVVGAFAKGDILQVLLFAILFGFALMTLGERGHRLRDVIDDASHAVFGVIAIVMKAAPVGAFGAMAFTIGKFGPAALGNLIGLIAVFYITAALFVVLVLGLIAKIVGFNIFKFLKYIKDELLIVLGTSSSESALPQLMEKLERLGCSKSVVGLVVPTGYSFNLDGTNIYMTLATLFIAQALGVDLTWTEQLTILLVAMLTSKGASGVSGAGFITLAATLSVVNPALVPGMAIVFSVDKFMSEVRALTNITGNGVATVFVSWWENELDHDKLAAALNKTIDPSDIETAVTTG", - "output": "plasma membrane ; symporter activity ; dicarboxylic acid transport" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MPKKAVVLLSGGLDSSTVLAYALNKGFEVYAISFDYGQRHLKEMKSSEAISKFYNVDRKIVKVDLRSIGKSALTDNIEVPSRDISTIEEEIPVTYVPARNTIFLSIAAAYAESLGTNEVFIGANAIDYSGYPDCRPEYFNAMENALSLGTKIGLKEKFHINVPLQYLSKADIVKLGVKLNVPYELTWSCYKGEEEACGECDSCQLRLKGFMEAGFADPLKYSKYPEFYSKNLVKLRPLKRR", - "output": "ATP binding ; ligase activity, forming carbon-nitrogen bonds ; zinc ion binding" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MGEVKVSPDYNWFRGTVPLKKIIVDDDDSKIWSLYDAGPRSIRCPLIFLPPVSGTADVFFRQILALTGWGYRVIALQYPVYWDHLEFCDGFRKLLDHLQLDKVHLFGASLGGFLAQKFAEYTHKSPRVHSLILCNSFSDTSIFNQTWTANSFWLMPAFMLKKIVLGNFSSGPVDPMMADAIDFMVDRLESLGQSELASRLTLNCQNSYVEPHKIRDIPVTIMDVFDQSALSTEAKEEMYKLYPNARRAHLKTGGNFPYLCRSAEVNLYVQIHLLQFHGTKYAAIDPSMVSAEELEVQKGSLGINQEEQ", - "output": "cytosol ; trans-Golgi network transport vesicle ; CD4 receptor binding" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "EVKYDPCFGHKIDRINHVSNLGCPSLRDPRPNAPSTSA", - "output": "extracellular region ; hormone activity ; potassium channel regulator activity ; toxin activity ; regulation of blood pressure ; vasodilation" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MFETVIGLEVHCQLNTKTKIFCSCSTSFGDEPNTHVCPTCLALPGALPVLNKEAVKKAISFGKAINATVNKKSVFDRKNYFYPDLPKAYQISQFTIPIVEKGELFIKVGGEIKRIGITRAHLEEDAGKNNHETNKSLVDLNRAGTPLLEIVSEPDLRNSDEAVAYLKKLHSILRFLNISDANMQEGSFRCDVNVSIRPKGDEKLYTRVEIKNLNSFKFIQKAIEYEVERQILSWEDGKYDEEVYQETRLFDTNKLVTKSMRSKEDSAEYRYFPDPDLLPVIIPDKMMEEASVLPELPDEKKARYVKDLGIKESDAEVIISSYEMARYFEDLIEAKNSPKLAVTWLCVELLGRLKNGVTIETSPVDSKKLSNLINRIEDGTISQKAAKDVLDYVMEHDEDVSSVIEKLGLKQVSDDSAILAIIDSVLSANSDKVAEFKSGKDKLFGFFVGQVMKEGKGAFNPSKVNDLLKSKL", - "output": "asparaginyl-tRNA synthase (glutamine-hydrolyzing) activity ; ATP binding ; glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity ; translation" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MSSGGLLLLLGLLTLWAELTPVSGQDRPVKPGLCPPRPQKPPCVKECKNDWSCRGEQKCCHYGCIYECRDPIFVK", - "output": "extracellular region ; peptidase inhibitor activity ; defense response to bacterium" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MAFHCQRDCYATELLTEVVSCHPAQLKLENGGKKNTVSGFNVLLKDTVLFPEGGGQPDDRGFIGEVPVLRVIRQGPDAVHFVASPLDPATEVLVKIDWNRRFDHMQQHSGQHLVTAIADSLYGFKTTSWDLGRQRSVIELDTPLVTTEQLEAIEKIANQKIREHVPVHVRLITVDDPEFDMVRSRGLPDDHAGPVRIIDIEGVDANMCCGTHVRNLSDLQMIKILGTEKGKKNKTNLIFLSGERVLKYVSRSYNTEKTLTSLLKNGPEEHIEAVDKLQKSVKALQKNNLTLLRDLAVLTAENFKSKADRGKFFSLHRKEGDNEFMNIIANVIGTEDTLLFLTIGDEKTSGLFLLAGPPGIVEKFGPRVCEILDGKGAGKCGRFQGKANKMSQRAEVEVLLQKVISSVEITQE", - "output": "cytoplasm ; alanine-tRNA ligase activity ; ATP binding ; metal ion binding ; nucleic acid binding ; alanyl-tRNA aminoacylation" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "ERIKELRDLMSQSRTREILTKTTVDHMAIIKKYTSGRQEKNPALRMKWMMAMKYPITADKRIIEMIPERNEQGQTLWSKTNDAGSDRVMVSPLAVTWWNRNGPTTSAVHYPKVYKTYFEKVERLKHGTFGPVHFRNQVKIRRRVDINPGHADLSAKEAQDVIMEVVFPNEVGARILTSESQLTITKEKKEELQDCKIAPLMVAYMLERELVRKTRFLPVAGGTSSVYIEVLHLTQGTCWEQMYTPGGEVRNDDVDQSLIIAARNIVRRATVSADPLASLLEMCHSTQIGGIRMVDILRQNPTEEQAVDICKAAMGLRISSSFSFGGFTFKRTSGSSVKKEEEVLTGNLQTLKIRVHEGYEEFTMVGRRATAILRKATRRLIQLIVSGRDEQSIAEAIIVAMVFSQEDCMIKAVRGDLNFVNRANQRLNPMHQLLRHFQKDAKVLFQNWGIEPIDNVMGMIGILPDMTPSTEMSLRGVRVSKMGVDEYSSTERVVVSIDRFLRVRDQRGNVLLSPEEVSETQGTEKLTITYSSSMMWEINGPESVLVNTYQWIIRNWETVKIQWSQDPTMLYNKMEFEPFQSLVPKAARGQYSGFVRTLFQQMRDVLGTFDTVQIIKLLPFAAAPPEQSRMQFSSLTVNVRGSGMRILVRGNSPVFNYNKATKRLTVLGKDAGALTEDPDEGTAGVESAVLRGFLILGKEDKRYGPALSINELSNLAKGEKANVLIGQGDVVLVMKRKRDSSILTDSQTATKRIRMAI", - "output": "host cell nucleus ; virion component ; RNA binding ; 7-methylguanosine mRNA capping ; cap snatching ; DNA-templated transcription ; suppression by virus of host mRNA transcription via inhibition of RNA polymerase II activity ; viral RNA genome replication" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MPRLSRRQLLKTAAISTALSTVPAPLLAASREKLVVPPLIEVRRGRPIVLTMQETNYPLDGSHNVTVWGFNGNYLGPTIKIKSGSFAKLNYHNNLPQSVALSIQGLQASGELFGGAARVLKKGESWAPIVPIEQPAASCWYRSATLANSAYQTYRGLAGMWLIEDEQSLKANLPNKYGVDDIPLILQDMEFNNDGLQLFKQNQPHFVGNRLLVNGIEAPYLDVARGWIRLRLLNASLARAYDLRLDNDQEMLLIAQDLSFLPKAKSVKSLVLSPGERAEILVNMNEIDNVSLISGSKRSLYEKIKNMLFSGDELANNTVLELRAQGQLSAFNKQPNLTFETDAPAILQQAVAQTREFNIDVTNGLINQRRFDPRKVDVMARKGTIERWILNASLPVGFTIQGAKFVVESQGEHQLQAEELAWKDTVWVKNKTQILVKFDQASSGNFPFLFGVSNLMLEDMGCLGVLMVQ", - "output": "cell division site ; outer membrane-bounded periplasmic space ; copper ion binding ; oxidoreductase activity ; FtsZ-dependent cytokinesis" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MKIIKISPRGYCYGVVDAMVIARNAALDKSLPRPIYILGMIVHNKHVTDAFEEDGIITLDGPSRLEILDQIDSGTVIFTAHGVSPEVKQRAKEKGLTTIDATCPDVTKTHDLIEAKKSEGYHVIYIGKKGHPEPEGAVGIAPDIVHLIEKADDLKTLEIPTDKILVTNQTTMSQWDVQHLMEDIKKKFPTAEFHKEICLATQVRQEAVAKQADVADLTIVVGDPKSNNSNRLAQVSQEIAGTKAYRVADVSEIQLEWLQGVEAVAVTAGASTPTPITKEVIAFLEQYDPTNPATWERKRNVPLQKILPRVKVKKQ", - "output": "4 iron, 4 sulfur cluster binding ; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity ; metal ion binding ; dimethylallyl diphosphate biosynthetic process ; isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway ; terpenoid biosynthetic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MDLAGLLKSQFLCHLVFCYVFIASGLIINTIQLFTLLLWPINKQLFRKINCRLSYCISSQLVMLLEWWSGTECTIFTDPRAYLKYGKENAIVVLNHKFEIDFLCGWSLSERFGLLGGSKVLAKKELAYVPIIGWMWYFTEMVFCSRKWEQDRKTVATSLQHLRDYPEKYFFLIHCEGTRFTEKKHEISMQVARAKGLPRLKHHLLPRTKGFAITVRSLRNVVSAVYDCTLNFRNNENPTLLGVLNGKKYHADLYVRRIPLEDIPEDDDECSAWLHKLYQEKDAFQEEYYRTGTFPETPMVPPRRPWTLVNWLFWASLVLYPFFQFLVSMIRSGSSLTLASFILVFFVASVGVRWMIGVTEIDKGSAYGNSGSKQKLND", - "output": "endoplasmic reticulum ; endoplasmic reticulum membrane ; 1-acylglycerol-3-phosphate O-acyltransferase activity ; CDP-diacylglycerol biosynthetic process" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MSKIIGIDLGTTNSAVAVLEGTESKIIANPEGNRTTPSVVSFKNGEIIVGDAAKRQAVTNPDTVISIKSKMGTSEKVSANGKEYTPQEISAMILQYLKGYAEDYLGEKVTKAVITVPAYFNDAQRQATKDAGKIAGLEVERIVNEPTAAALAYGLDKTDKEEKILVFDLGGGTFDVSILELGDGVFDVLSTAGDNKLGGDDFDQKIIDHLVAEFKKENGIDLSTDKMAMQRLKDAAEKAKKDLSGVTSTQISLPFITAGEAGPLHLEMTLTRAKFDDLTRDLVERTKVPVRQALSDAGLSLSEIDEVILVGGSTRIPAVVEAVKAETGKEPNKSVNPDEVVAMGAAIQGGVITGDVKDVVLLDVTPLSLGIETMGGVFTKLIDRNTTIPTSKSQVFSTAADNQPAVDIHVLQGERPMAADNKTLGRFQLTDIPAAPRGIPQIEVTFDIDKNGIVSVKAKDLGTQKEQTIVIQSNSGLTDEEIDRMMKDAEANAEADKKRKEEVDLRNEVDQAIFATEKTIKETEGKGFDAERDAAQAALDDLKKAQEDNNLDDMKAKLEALNEKAQGLAVKLYEQAAAAQQAQEGAEGAQATGNAGDDVVDGEFTEK", - "output": "ATP binding ; ATP-dependent protein folding chaperone ; unfolded protein binding" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MTTIAAVRKDGVTALAGDGQVTLGEKVIMKGNAQKVRRIYHDQVVIGFAGGVADAFTLQDWFEKKLEHYAGNLRRSAVALAQDWRKDPTLQKLEAMMIVMDEHDLLLVSGSGEVIDPDEDVVAIGSGGNFAQAAAIAMLRHAPDMTPADIAKEAVNIAGNIDIFTNHNVIVESF", - "output": "HslUV protease complex ; proteasome core complex ; metal ion binding ; threonine-type endopeptidase activity ; proteolysis involved in protein catabolic process" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MEAVPSSDSYPAVENEHLQETPESNNSVYTSFMKSHRCYDLIPTSSKLVVFDTSLQVKKAFFALVTNGVRAAPLWDSKKQSFVGMLTITDFINILHRYYKSALVQIYELEEHKIETWREVYLQDSFKPLVCISPNASLFDAVSSLIRNKIHRLPVIDPESGNTLYILTHKRILKFLKLFITEFPKPEFMSKSLEELQIGTYANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLAAEKTYNNLDVSVTKALQHRSHYFEGVLKCYLHETLETIINRLVEAEVHRLVVVDENDVVKGIVSLSDILQALVLTGGEKP", - "output": "nucleotide-activated protein kinase complex ; nucleus ; ADP binding ; AMP binding ; ATP binding ; protein kinase regulator activity ; fatty acid biosynthetic process ; protein phosphorylation" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MEATSVFRPKLGSQFSLPSTTNLFPLRKLYGFPLTSFPGKPIKRIRLKATNTLTFDDKERTRKFKKLPLSEWTHYFHSIPLDISEMDALKEEIDELKPKVKNTFMSSQGSDSTKTKILMIYLFVSLGLAYHFEEEIYETLKEGFENIEKIMAGEEDLYTVSIIFWVFRRYGHYISSDVFQRFKGSNGSFKESLIGDAKGMLSLYEAAHLATTKDYILDEALIFTSSHLETLVATGTCPPHLLARIRNALSICQHWNFEVLVPLDFIPFYEQEKDHDEMLLKFAKLSFKYLKLIYLQDLKILTKWYKKLDFPSKFPPYFKDRCVENYFFVLPVFFEPQLSSARMLLTKGFILLGIQDDTFDRYASISEAESLGNSLKRWAPDHSMDKQPEYLKSVLKVILDTFQEFEKELSPEGRSYSVKYTIEEFQASSKANVELAKWAQVSHVPSFEKYMEVGQMEITACVTVAYILMSMGKTGTKEAFEWLKSRPKLVQSLCTKGRLMNDIAGFEDDMSRGYVVNAVNCYMKQYGVTEKEAFKELRKMVVNTHKTLNEEFLTTTCVSHYVLRETMDFARMIIVTYNGYEGFTRPDEGKIEEYMTSLFVDHTLKML", - "output": "cytoplasm ; magnesium ion binding ; terpene synthase activity ; diterpenoid biosynthetic process ; terpenoid biosynthetic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MPITFKKIDKEDFLEIRKNFLENYKNLDDFDLNTAIRFHKSLPDHKNFQKKIEQSVQDNKIMTQAHSKETLLEDLIKNLNTFYRVGQADFLSIIIDSHTRENHYDNAKVILEDSIKSNKSLLNGFPLINYGTKLARKIINDVEVPLQIKHGSPDARLLVEVALLSGFSAFDGGGISHNIPFSKSISLKDSLENWKYVDRLVGIYEENGIKINREIFSPLTATLVPPAISNSIQILETLLAVEQGVKNISIGVAQYGNITQDIASLLALKEHIQFYLDTFSFKDINISTVFNQWIGGFPEEELKAYSLISYSTTIALFSKTNRIFVKNIDEYAKNSLGNTMINSLLLTKTILDIGNNQKINNYEEIIFEKEQIKKETAQIIAKIFSRCDGDLRKAIIEAFEYGVLDVPFAPSKYNLGKMMPARDSEGMIRYLDIGNLPFCPLIEEFHNKKIKERSMKENREINFQMTIDDIFAMSQGKLINKKSRE", - "output": "cobalamin binding ; methylaspartate mutase activity ; anaerobic glutamate catabolic process ; glutamate catabolic process via L-citramalate" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MYKQIFLCLIIAALCATIMAEASALADADDDDDKRYVRGMASKAGAIAGKIAKVALKALGRRDS", - "output": "extracellular region ; defense response to bacterium ; defense response to fungus ; killing of cells of another organism" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MKLSTVLCCYLLLLGLFAPEIISDSPPLQDVCPMAPQGERKLFMNGFFCKSPSTIMASDFKTLLLNHAGDLDNMVRSSANIITATEFPGLNTLGISMARTDIAVSGAVLPHSHPRASEMMFVHSGSVVAGFFDTKGKLFQKTLAEGDVFIFPRGLVHFIMNYGFGLATTFSVLNSQNPGVVGITHAMFAPDSEVAEGLMARMLSFRDMGMDDSSSVDSPWFY", - "output": "apoplast ; manganese ion binding" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MTQDELKRLVGQAAADYVIQNVPEGAVIGVGTGSTANCFIDALAAVKARYRGAVSSSLATTERLKSHGIKVFDLNEIESLQVYVDGADEIDASGAMIKGGGGALTREKIVASVADTFVCIADASKRVPVLGAFPLPIEVVPMARTAIGRRVTALGGVPVLRVTKDGAPYITDNGNEIIDVKGLQIADPRGFEAQVNAWPGVVTVGLFAERGANLCLLGTPNGVETIVYPA", - "output": "ribose-5-phosphate isomerase activity ; pentose-phosphate shunt, non-oxidative branch" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MRTGIIAQKIGMTSVFNDKGERIPLTLVKVDDCQVVGHKTLEKHGYNALVIGIKDKKISRVTKPMKQVFANAKISPKTKLKEFRISEGNFIDIAANLEVDHFMAGQFVDITATTIGKGFAGSMKRHNFRGLEASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHMGCNQVTIQNLKIFAVDRERKLIMIRGSIPGHKNSYLSIKDAVKKNSITV", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MPKKVLTGVVVSDKMQKTVTVLVERQFPHPLYGKVIKRSKKYLAHDPEEKYKLGDVVEIIESRPISKRKRFRVLRLVESGRMDLVEKYLIRRQNYQSLSKRGGKA", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MKVALVYNEKVETLAVVKALEKLLDSRKIEIDPENPDVVITIGGDGTLISGFHKYQNLVDQIRFIGVHTGHLGFYTDWRNFEIGKMVDNLTKKQPSSASYPLLELIITTGSGEKKKLLALNEATIKRVSKTLKADVYIRDQFFESFKGDGLCVSTPTGSTAYSKSLGGAVIHPRLKALQMTEIASINNRVFRTLSSPIVIAPDEWITIKPESDDHYVVTYDGYEFNHKHIKKIEYRISQHVIRFDKYQHTHFWNRVEDAFIGQPKNK", - "output": "cytoplasm ; ATP binding ; metal ion binding ; NAD binding ; NAD+ kinase activity ; NAD metabolic process ; NADP biosynthetic process ; phosphorylation" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MNLSQFEQFDLSPELLKALEKKGYSRPTAIQMEAIPAAMEESDVLGSAPTGTGKTAAFLLPALQHLLDYPRRKPGPPRILVLTPTRELAMQVAEQAEELAQFTHLNIATITGGVAYQNHGDVFNTNQDLVVATPGRLLQYIKEENFDCRSVEMLIFDEADRMLQMGFGQDAEKIAAETRWRKQTLLFSATLEGELLVDFAERLLNDPVKVDAEPSRRERKKINQWYYHADSNEHKIKLLARFIETEEVTRGIVFIRRREDARELSETLRKRGIRSAYLEGEMAQTQRNNAIDKLKSGIVTVLVATDVAARGIDIDDVSHVMNFDLPYSADTYLHRIGRTARAGKKGTAVSFVEAHDYKLLGKIKRYTEEILKARILAGLEPRTKPPKDGEVKSVSKKQKARIKEKREEKKKTEAKKKVKLRHKDTKNIGKRRKPSNSNV", - "output": "cytosol ; ATP binding ; ATP hydrolysis activity ; nucleic acid binding ; RNA helicase activity ; ribosomal large subunit assembly" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MENLNMDLLYMAAAVMMGLAAIGAAIGIGILGGKFLEGAARQPDLIPLLRTQFFIVMGLVDAIPMIAVGLGLYVMFAVA", - "output": "plasma membrane ; proton-transporting ATP synthase complex, coupling factor F(o) ; lipid binding ; proton-transporting ATP synthase activity, rotational mechanism" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MSTIRCDIVSAEQEIFHGEATFVVATGELGELGIAPKHAPLITRLKPGKVVITTVNGEQLDFAISGGILEVQPQVVTILADSAIRADTIDEVAVRKAKEEAERILANRGETIDVAKAQQQLVEAVVQMQALERLRRTVKH", - "output": "plasma membrane ; proton-transporting ATP synthase complex, catalytic core F(1) ; ATP binding ; proton-transporting ATP synthase activity, rotational mechanism" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MRLDENEGAFTIPEFGKIQFEGFCRFIDQGLMEELHNFPKIEDTDKEIEFSLFGNEYELAEPFIKERDAVYQSLTYYSELYVPARSIRRNSRKIQKQTVFLGNIPLMNSHGTFVVNGIYRIVVNQILISPGIYYRSELDHNRINYIYTGTLISDWGRRSKLEIDVGERIWARVSRKRKISIPVLLSAMGLNLEEILDNTHYPKRFLFLLKKKERWEREEYLWSREKAILEFYKKLYCVSGDLVFSESLCKELQEKFFRQRCELGKIGRRNLNQKLNLDIPENEIFSLPQDVLAAVDYLIGVKFGMGTLDDIDHLRNRRIRSVADLLQNQFRLTLGHLEDTVRRTIHGATKRRSTPQNLVTSTLFKNTFQDFFGSHPLSQFLDQTNPLTEIAHGRKLSHLGPGGLTGRTASFRTRDIHPSYYGRICPIDTSEGMNAGLVSSLSIHAKIGDCGSLQSPFYKISERSREEHMVYLLPGEDEDEYYRIATGNSLALNQGIQEEQITPARYRQEFIVIAWEQIHFRSIFPFQYFSVGVSLIPFLEHNDANRALMGSNMQRQAVPLFRPEKCIAGTGLEGQAALDSGSVAIATQEGRIEYIDAVNITSSINGDTVRTESVIYQRSNTNTCTHQKPQVRQGECVKKGQILADGATTVGGELSLGKNVLVAYMPWEGYNFEDAILISERLVYEDIYTSFHIVRYRIEICMTSQGPERITREIPHLDAHSLRHLDENGLVMLGSWIETGDVLVGKLTPQTTEESLCTPEGRLLQTIFGIEVSTARESCLRAPIGGKGRVIDVRWINRVDDSGDNAETVHVYISQKRKIQVGDKVAGRHGNKGIISIILPRQDMPYLQNGIPVDMVLNPLGVPSRMNVGQIFECLPGLAGNLMNKHYRITPFDEKYEREASRKLVFPELYKASEQTANPWVFEPDHPGKHRLIDGRTGAVFEQPVTIGKAYMSKLSHQVDEKIHARSSGPYARVTQQPLRGKSKRGGQRIGEMEVWALEGFGVAYILQEMLTLKSDHIRTRNEVLGAIITGGPIPKPDTAPESFRLLIRELRSLALELNHAIISEKDFQIDREEV", - "output": "chloroplast ; DNA-directed RNA polymerase complex ; DNA binding ; DNA-directed 5'-3' RNA polymerase activity ; ribonucleoside binding ; DNA-templated transcription" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MYVFPKISLRPEVENYLKESFLNEEAVSASSRQEAERKFETLLLRLSHPPSMTTVRVNTHLGSVQHVRGLLLEELQKQFGESSIPVVQHPALPDVLLIPMTGPRKNIERQQGEVIVGAQCGNAVLRGAHVYVPGIVSASKFMKAGDVISVYSDINGKCKKGAKEFDGTKVFLGNGISELSRKDIFNGLPDLKGIGIRMTEPIYLSPSFDNVLPSYIFLQNLPSTVVAHVLDPQPGEKILDMCAAPGGKTTHTAALMQDKGEVIALDKILTKVNKLKQNASLLGLHSIRAFCFDATKALKLDTTDGIEGGPPFLPESFDRIILDAPCSGMGQRPNMACTWTLKEVTSYQPLQRKLLHVAVQLLKPGGVLVYSTCTITLAENEEQVAWALRTFPCLQLQPQEPQIGGEGMVGAGLTLEQLKQLQRFDPSVVPLQNMDTDSLGEARREDMIWLANKDCIGFFIAKFLKCQSTKAKVSQK", - "output": "cytoplasm ; nucleoplasm ; tRNA (cytosine-5-)-methyltransferase activity ; tRNA binding ; RNA methylation ; tRNA C5-cytosine methylation ; tRNA methylation" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MTVPAPSQLDLRQEVHDAARRARVAARRLASLPTTVKDRALHAAADELLAHRDQILAANAEDLNAAREADTPAAMLDRLSLNPQRVDGIAAGLRQVAGLRDPVGEVLRGYTLPNGLQLRQQRVPLGVVGMIYEGRPNVTVDAFGLTLKSGNAALLRGSSSAAKSNEALVAVLRTALVGLELPADAVQLLSAADRATVTHLIQARGLVDVVIPRGGAGLIEAVVRDAQVPTIETGVGNCHVYVHQAADLDVAERILLNSKTRRPSVCNAAETLLVDAAIAETALPRLLAALQHAGVTVHLDPDEADLRREYLSLDIAVAVVDGVDAAIAHINEYGTGHTEAIVTTNLDAAQRFTEQIDAAAVMVNASTAFTDGEQFGFGAEIGISTQKLHARGPMGLPELTSTKWIAWGAGHTRPA", - "output": "cytoplasm ; glutamate-5-semialdehyde dehydrogenase activity ; NADP binding ; L-proline biosynthetic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MNRLTHCFNELKQRNTKALVTFITAGDPDLATTQAMIPLLQQAGADIIELGMPFSDPMADGPTIQLSSERALAASTTLERILAMVRAVRRSCQVPIVLMGYLNPIHAYGYERFANDAAEAGVDGVLVVDMPPEEAESFLNHANARDLQVAFLLTPTSTDSRIATVGRLGRGFVYYVTVTGVTGARQQVSTTLGGELAKVRAKISVPIVAGFGISTPQQAADVAAMADGVVVGSALVKLFQLHSGEELRQEVTRFVASLRQAIPGGAA", - "output": "tryptophan synthase activity" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MNVGIKGFGAYAPEKIIDNAYFEQFLDTSDEWISKMTGIKERHWADDDQDTSDLAYEASLKAIADAGIQPEDIDMIIVATATGDMPFPTVANMLQERLGTGKVASMDQLAACSGFMYSMITAKQYVQSGDYHNILVVGADKLSKITDLTDRSTAVLFGDGAGAVIIGEVSDGRGIISYEMGSDGTGGKHLYLDKDTGKLKMNGREVFKFAVRIMGDASTRVVEKANLTSDDIDLFIPHQANIRIMESARERLGISKDKMSVSVNKYGNTSAASIPLSIDQELKNGKIKDDDTIVLVGFGGGLTWGAMTIKWGK", - "output": "cytoplasm ; 3-oxoacyl- synthase activity ; beta-ketoacyl-acyl-carrier-protein synthase III activity ; fatty acid biosynthetic process" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MTSIPISVQGYKALEEELARLKSERPEIIQAIKEAREEGDLRENAGYDAARERQGMAEARIKYIESRMALYQVIDLDTLSGDKVIFGATVDLEDVDSGEAKTYTILGPDEADPSKGSISFLSPVGQALLGREEGDEVSVEIPRGRVTYEIIGVSFKGSKNLG", - "output": "DNA binding ; RNA polymerase binding ; regulation of DNA-templated transcription elongation" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MSKNKTKKGGDSTIALNKKARHDYFIEDKYEAGLALQGWEVKSLRAGKAHIGDSYVLLQNGEAFLFGATITPLNVASTHVVCDPTRIRKLLLKKSELERLIGLVERQSYTLIPLSMYWSRAWVKVEIGLAKGKKEHDKREDLKEREWQRDKERMMKNKGR", - "output": "cytoplasm ; RNA binding ; trans-translation" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MFHSLLVKNFILIDELEIEFNKGLCVITGETGAGKSILLDAILFCLGYKTSNNIIKRGKDYAVVNIIFSLNEEIKNFLIQNFIEPEELLLVKCLQKAEGRKNFFINNQVVNKAIMQQLATYLFELHGQNNNISLLEANTQRDILDSYGNLLDFRAELSKCYQTWQNTRKEIAEITLKQNSIDQEIDYLSFATEELTKLNIQIGEEEKLANIRKDLQNKDKDLQLIKDVLEQINNPEINTSINRAEKLLARQGDNERFEAIATSLEEAYNNLEEARQGLSNLLDSFNYEEYNLEETEERLFLIKAISRKYNVPADELGIFLDKSLEQLGILKNKIANSNELKAQEMLLQKKYYELASDLSVKRLIAAKHLEESLHQELKQLKMAKAIFEIEIIAGKEPTASGNDDIVFKASTNPGMATEAINKIASGGELSRFMLALKTSLFDKMVKPSIIFDEIDVGIGGEVADKVGERLKKLSSVTQVIVITHQPQVAGKADLHIKIEKTQLEKETKVTVKALNLAERQEELARMISGKTITEASLKAAKELLHL", - "output": "ATP binding ; DNA recombination ; DNA repair" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MPSIKLLVWCCLCVISPRLCHSEKLFHSRDRSDLQPSAIEQAELVKDMLSAQQFLAKYGWTQPVIWDPSSTNENEPLKDFSLMQEGVCNPRQEVAEPTKSPQFIDALKKFQKLNNLPVTGTLDDATINAMNKPRCGVPDNQMAKKETEKPTAAQSLENKTKDSENVTQQNPDPPKIRRKRFLDMLMYSNKYREEQEALQKSTGKVFTKKLLKWRMIGEGYSNQLSINEQRYVFRLAFRMWSEVMPLDFEEDNTSPLSQIDIKLGFGRGRHLGCSRAFDGSGQEFAHAWFLGDIHFDDDEHFTAPSSEHGISLLKVAAHEIGHVLGLSHIHRVGSIMQPNYIPQDSGFELDLSDRRAIQNLYGSCEGPFDTAFDWIYKEKNQYGELVVRYNTYFFRNSWYWMYENRSNRTRYGDPLAIANGWHGIPVQNIDAFVHVWTWTRDASYFFKGTQYWRYDSENDKAYAEDAQGKSYPRLISEGFPGIPSPINAAYFDRRRQYIYFFRDSQVFAFDINRNRVAPDFPKRILDFFPAVAANNHPKGNIDVAYYSYTYSSLFLFKGKEFWKVVSDKDRRQNPSLPYNGLFPRRAISQQWFDICNVHPSLLKI", - "output": "extracellular matrix ; extracellular region ; metalloendopeptidase activity ; zinc ion binding ; determination of heart left/right asymmetry ; determination of left/right symmetry ; proteolysis" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MLLEEDPSTLIAHTTQNFNITPDRHAVSRVAESLSTLQQARDLRLRESETNLKKLARTLNTLQSQHQEVTSSHSSAEHASLISRLDTQKFRVAKNVSDLEMETERLQTQLAELQARLQELELQGVDGGDASAAGGATSTGENNGNGSAGNGGQVRSVEDEVLLRLKVYRSLGIEIEREEQDGGEFTRAVVRNDRRGDVCVVNVDRHRFSRFFYANYFWQTL", - "output": "cytoplasm ; kinetochore ; nucleus ; spindle pole body ; cell cycle ; cell division" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MRIGMICPYSFDVPGGVQSHVLQLAEVMRTRGHLVSVLAPASPHAALPDYFVSGGRAVPIPYNGSVARLRFGPATHRKVKKWLAHGDFDVLHLHEPNAPSLSMLALNIAEGPIVATFHTSTTKSLTLTVFQGILRPMHEKIVGRIAVSDLARRWQMEALGSDAVEIPNGVDVDSFASAARLDGYPRQGKTVLFLGRYDEPRKGMAVLLDALPKVVQRFPDVQLLIVGHGDADQLRGQAGRLAAHLRFLGQVDDAGKASAMRSADVYCAPNTGGESFGIVLVEAMAAGTAVVASDLDAFRRVLRDGEVGHLVPVDPPDLQAAALADGLIAVLENDVLRERYVAAGNAAVRRYDWSVVASQIMRVYETVAGSGAKVQVAS", - "output": "plasma membrane ; GDP-Man:Man3GlcNAc2-PP-Dol alpha-1,2-mannosyltransferase activity ; phosphatidylinositol alpha-mannosyltransferase activity ; glycolipid biosynthetic process ; phosphatidylinositol metabolic process ; phospholipid biosynthetic process" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MEAIKKKMQAMKLEKDNAIDRAEIAEQKARDANLRAEKSEEEVRGLQKKIQQIENELDQVQEQLSAANTKLEEKKKALQTAEGDVAALNRRIQLIEEDLERSEERLKIATAKLEEASQSADESERMRKMLEHRSITDEERMDGLENQLKEARMMAEDADRKYDEVARKLAMVEADLERAEERAETGESKIVELEEELRVVGNNLKSLEVSEEKAQQREEAHEQQIRIMTAKLKEAEARAEFAERSVQKLQKEVDRLEDELVHEKEKYKSISDELDQTFAELTGY", - "output": "contractile fiber ; protein homodimerization activity ; regulation of muscle contraction" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MSKFKSLLLLFGTLILLSGCSNIEIFNAKGPVASSQKFLILYSIVFMLVICFVVLGMFAIFIYKYSYNKNAESGKMHHNAIIETIWFVIPIIIVAALAIPTVKTLYDYEKPPKSEKDPMVVYAVSAGYKWFFAYPDEHIETVNTLTIPKDRPVVFKLQAMDTMTSFWIPQLGGQKYAMTGMTMNWTLEASQTGTFRGRNSNFNGEGFSRQTFKVNAVSQKDYDKWVKEVKGKKTLDQDTFDKQLLPSTPNKALEFNGTHMAFVDPAADPEYIFYAYKRFNFELKDPNFTSEENMFKDVSDKPLIPARKAQITNANYKRHGMKLMILGNDEPYNNEFKKDESKNAKEMKKISKDAQDQDNDDHGGGH", - "output": "plasma membrane ; respirasome ; copper ion binding ; cytochrome bo3 ubiquinol oxidase activity ; cytochrome-c oxidase activity ; oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MPLSYQHFRRLLLLDDEAGPLEEELPRLADEGLNRRVAEDLNLGNLNVSIPWTHKVGNFTGLYSSTVPVFNPHWKTPSFPNIHLHQDIIKKCEQFVGPLTVNEKRRLQLIMPARFYPKVTKYLPLDKGIKPYYPEHLVNHYFQTRHYLHTLWKAGILYKRETTHSASFCGSPYSWEQDLQHGAESFHQQSSGILSRPPVGSSLQSKHRKSRLGLQSQQGHLARRQQGRSWSIRAGFHPTARRPFGVEPSGSGHTTNFASKSASCLHQSPVRKAAYPAVSTFEKHSSSGHAVEFHNLPPNSARSQSERPVFPCWWLQFRNSKPCSDYCLSLIVNLLEDWGPCAEHGEHHIRIPRTPSRVTGGVFLVDKNPHNTAESRLVVDFSQFSRGNYRVSWPKFAVPNLQSLTNLLSSNLSWLSLDVSAAFYHLPLHPAAMPHLLVGSSGLSRYVARLSSNSRILNNQHGTMPDLHDYCSRNLYVSLLLLYQTFGRKLHLYSHPIILGFRKIPMGVGLSPFLLAQFTSAICSVVRRAFPHCLAFSYMDDVVLGAKSVQHLESLFTAVTNFLLSLGIHLNPNKTKRWGYSLNFMGYVIGCYGSLPQEHIIQKIKECFRKLPINRPIDWKVCQRIVGLLGFAAPFTQCGYPALMPLYACIQSKQAFTFSPTYKAFLCKQYLNLYPVARQRPGLCQVFADATPTGWGLVMGHQRMRGTFSAPLPIHTAELLAACFARSRSGANIIGTDNSVVLSRKYTSFPWLLGCAANWILRGTSFVYVPSALNPADDPSRGRLGLSRPLLRLPFRPTTGRTSLYADSPSVPSHLPDRVHFASPLHVAWRPP", - "output": "DNA binding ; DNA-directed DNA polymerase activity ; metal ion binding ; RNA-directed DNA polymerase activity ; RNA-DNA hybrid ribonuclease activity ; DNA replication ; suppression by virus of host innate immune response" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MIVFYLSGDRVFSTDQNAINGLYNKRHFGKLVEGKLFLSLLEATYLVERGKIEVREGKRKLTVEELMNLGRERDELFDAKYLVYKDLRDRGYTVKSGLKFGSHFRVYRRGMDEHSQWLVWVLPENSRLSPNDITARVRVAHGVRKNMIMAIVDEDADVTYYKVEWVRF", - "output": "lyase activity ; nucleic acid binding ; tRNA-intron endonuclease activity ; tRNA splicing, via endonucleolytic cleavage and ligation" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MRAVVQRVKRSKVEVDGKIIGEIGKGLNVLLGISVEDKKEDISYMKDKILNLRIFEDEEGKLNKSLLDVQGELLIISQFTLYGDCRKGRRPSFIKALGGEKARSVYNEFIDQCKDSVHNVQTGEFGADMLVSIENDGPVTIMVDSEKIF", - "output": "cytoplasm ; D-aminoacyl-tRNA deacylase activity ; Gly-tRNA(Ala) hydrolase activity ; Ser(Gly)-tRNA(Ala) hydrolase activity ; tRNA binding ; D-amino acid catabolic process" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MMGIEDIVLGLNVDRESAKRLYEIISKEDCSDVCRAAVLTAFHFKGVTREEFMGFLDAIYKPTVSVDATDIVGTGGDKKNTINVSTASAIVAASLGIPVAKFGNRSSTGAYGSADFMADAGYSFPRDVEAALHRLKSNNFVFMLAPTFIPEFKIFSTVRKRLGFPTLFNYLGPVLNPLAPKKRVIGSASTEMMDVYSYILNELGYQAIIIRGQDGMDEITPFNFTDVIYVDGSVEKYVVDGRSISNDVRYDKISSQDPSLIRKFNFMGLKGENEDAAKFIALNTAPVLILNKKAGNYEDAYRLALEAIKSGQAYEKLEAIMHENKGLRHN", - "output": "anthranilate phosphoribosyltransferase activity ; magnesium ion binding ; tryptophan biosynthetic process" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MRIALVVEYDGSQYHGWQAQTGLHTIQQAVEFALSKVADSSISVVCAGRTDTGVHATNQVIHFDCEKDRSIRAWIHGANTFLPKDICVKWGKEMPENFHARYSAVSRRYRYVIYNGAIRPGLLRGNVTWQYRQLDHRLMQQGGQCLLGENDFTSFRSVECQSNTPMRNIHQLQVTRHGDLVVLDITANAFLHHMVRNIAGVLIAVGSGKHPVGWVKDVLNAKDRKLGAETAPSYGLYLVQVTYPKEFGLLQNNPGPLFLWEK", - "output": "RNA binding ; tRNA pseudouridine synthase activity ; tRNA pseudouridine synthesis" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MGKKQVALPRALPPMPSTSIDEIPHSRPKKKKTKSNNNTPDDVLQNAGFTTSENNDPLSPERRKRKKKRFSIDAETSLTQNNPSIPVVLNGKDTDNQTTEEGATRKPRRRTKKTRLAEEEFPNELGVEDEDIIPDGHTKIPTQNPAFLASSLTSQPVGKLFVEKNRRFQAADRSEIIKTTEQMDVFLDVKPTWSSMDVSLTAHHIFRMVGLFCCGFLAGYAVWNIVVIYVLAGSQLTNLPNLLQTYKILAYPSQCFLYFLLVLSTVTAFDRIDLERAADALRGLLKLDPAAVASFFYFVALFLVLSQQMTSDRMNFYTPPTQNGSLWQTDTEGQILQPWIVINLVVAILVGLAWLFLSCRPDIDHSEEAMFIPEEEDYPDMEKGMKIQG", - "output": "ciliary transition zone ; membrane ; cilium assembly ; regulation of Wnt signaling pathway" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MILLEVNNRIIEEILTLKFENAAAGNKPEAVEVTFADFDGVLYHVSNPNGDKAKVLISISLKFYKELQEHGTDEVLKKVYGNFLVAPESGYNVSLLYDLESLPSNKDSVIHQAGMLKRNCFASVFEKYFKFQEEGKDGEKRAVIHYRDDETMYVEAKKDRVTVVFSTVFKDDDDVVIGKVFMQEFKEGRRASHTAPQVLFSHREPPLELKDTDAAVGDNIGYITFVLFPRHTNANARDNTINLIHTFRDYLHYHIKCSKAYIHTRMRAKTSDFLKVLNRARPDAEKKEMKTITGKTFAAR", - "output": "Arp2/3 protein complex ; cell projection ; cytoplasm ; nucleus ; site of double-strand break ; actin binding ; actin filament polymerization ; Arp2/3 complex-mediated actin nucleation" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MTMGDKKSPTRPKRQAKPAADEGFWDCSVCTFRNSAEAFKCSICDVRKGTSTRKPRINSQLVAQQVAQQYATPPPPKKEKKEKVEKPDKEKPEKDKDISPSVTKKNTNKKTKPKSDILKDPPSEANSIQSANATTKTSETNHTSRPRLKNVDRSTAQQLAVTVGNVTVIITDFKEKTRSSSTSSSTVTSSAGSEQQNQSSSGSESTDKGSSRSSTPKGDMSAVNDESF", - "output": "cytoplasm ; nucleoplasm ; nucleus ; PcG protein complex ; DNA binding ; metal ion binding ; nucleic acid binding ; transcription coregulator activity ; transcription corepressor activity ; apoptotic process ; chromatin remodeling ; negative regulation of proteasomal ubiquitin-dependent protein catabolic process ; negative regulation of transcription by RNA polymerase II ; positive regulation of apoptotic process ; positive regulation of DNA-templated transcription ; regulation of DNA-templated transcription" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MAKQVENNNNDHLVQSTDPEHPSNLIPELCRKFYNWGWVTGTGGGTSIRRDDHIFIAPSGVQKELMKPENIFVLQFPTPKYPPSERKYIRKPLDLKPSACTPLFLAAFERGAGCCIHTHSQWAVLVTLLVEREKGPGGYFEISNIEQIKGIPRGKGKGMLGFFDTLRIPIIENTAFEEDLTGSLEKAMEENPDTCAVLVRRHGIYVWGDNVAKAKTQCESLDYLFQLAVEMHKLGIPWVKE", - "output": "cytoplasm ; methylthioribulose 1-phosphate dehydratase activity ; zinc ion binding ; L-methionine salvage from methylthioadenosine ; L-methionine salvage from S-adenosylmethionine" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MVDKRESYTKEDLLASGRGELFGAKGPQLPAPNMLMMDRVVKMTETGGNFDKGYVEAELDINPDLWFFGCHFIGDPVMPGCLGLDAMWQLVGFYLGWLGGEGKGRALGVGEVKFTGQVLPTAKKVTYRIHFKRIVNRRLIMGLADGEVLVDGRLIYTAHDLKVGLFQDTSAF", - "output": "cytoplasm ; (3R)-3-hydroxydecanoyl- dehydratase activity ; (3R)-hydroxymyristoyl- dehydratase activity ; trans-2-decenoyl-acyl-carrier-protein isomerase activity ; fatty acid biosynthetic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MAPSLASGPADRIIVALDGMAPEQALRFAAQLDGLRWVKVGLELFVQAGPEVVAQLREQGLRVFLDLKFHDIPATMAGACRRAAALGAELITVHACAGSEALKAAQAAAVEGAQQAGLNPPTLLAVTVLTSWEEQRLQRELAIQQSIGERVPALAQLSATAGIGGCVCSPLEAAALRAQHPEPFALVTPGIRPKGSAVGDQARVMGPAEAIAAGASQLVIGRPITKADDPSAAFAACCTQLLGSID", - "output": "orotidine-5'-phosphate decarboxylase activity ; 'de novo' pyrimidine nucleobase biosynthetic process ; 'de novo' UMP biosynthetic process" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MAGESFPFTSSTLRALRLQREWLDWEDRRRAAAQQCRRHRDLPCPQAQLLRPRRSCRDPAVHNALFSGDLQQLQILFQDEDAANMIVETVSNQLAWSAEQGFWVLTPKTKQTAPLTIAVARGYTDCARHLILQGAELDARIGGRAALHEACAQAHPDCVRLLLTFGAKANVSSEEGMTPLHLCTSPESLQCAKLLLEAGASVNVASQESEVTPLHVAAARGLEQHVALYLQNGADVALRTSQGETALNAACAGAEGPGSSRQHEAAARQLLEAGADPQAAGRKRHTPLHNACANGCGGLAELLLRHGASPGVTNGAGHTPMDCALQAVQDAPNWEPEVLFAALLDYGAQPVHPEMLKHCANFPRALEVLLNAYPCVPSCDPWVEAVLPELWQEHEAFYSSALSMENQPRQLQHLARLAVRAQLGSHCRQAAAQLPLPPLLRDYLLLGVEGRIQ", - "output": "intracellular signal transduction ; protein ubiquitination" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MNISIISIGKLKEKYLKQGIAEYLKRLSSYAKVEVIELPDEKAPENLSEAEMLIVKEKEGVRILDKISDDTHVIALAIEGKQKSSEQFAESLDCLATYGKSKIAFVIGGSLGLSTEVMKRSNESLSFSKMTLPHQLMRLVLLEQIYRAFRINRGEPYHK", - "output": "cytoplasm ; rRNA (pseudouridine-N3-)-methyltransferase activity" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MLPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQANYDGYQFIVIDTGGIHGDEEGIDEEMAKQSLLAVDEADVVLFMVDARDGVTVGDQAIADHLRKQNKKVYLVCNKIDGIDAHSAMADFYSLSLGELYGIAAAHGRGVEQLLEICFKPIAEEYPDVIVPKDVASEELEHDEIDYDKLPLKLAIVGRPNVGKSTLINRILGEERVVVYDMPGTTRDSVYIPMQRNEREYVLIDTAGVRRRGRIGEAIEKFSVVKTLQAIEDANVVLIVVDARETISDQDLNLIGFALNAGRSIVIAVNKWDGLQNDHKEEIKRELDRRLGFVDFARLHFISALHGTGVGHLFESVEEAYASATQRISTSKLTKIMEMAQEEHQPPLVSGRRVKLKYAHAGGYNPPRIIIHGNQVKDLPGAYQRYLINYFRKSLGVMGTPIKVEFREPVNPYEGKKNQLTLSQQRKRRRLMKFLKKKK", - "output": "GTP binding ; ribosome biogenesis" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MSAQKPGLHPRNRHHSRYDLATLCQVNPELRQFLTLTPAGEQSVDFANPLAVKALNKALLAHFYAVANWDIPDGFLCPPVPGRADYIHHLADLLAEASGTIPANASILDIGVGANCIYPLIGVHEYGWRFTGSETSSQALSSAQAIISANPGLNRAIRLRRQKESGAIFNGIIHKNEQYDATLCNPPFHDSAAAARAGSERKRRNLGLNKDDALNFGGQQQELWCEGGEVAFIKKMIEESKGFAKQVMWFTSLVSRGENLPPLYRALTDVGAVKVVKKEMAQGQKQSRFIAWTFMNDEQRRRFVNRQR", - "output": "cytoplasm ; 23S rRNA (adenine(1618)-N(6))-methyltransferase activity" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MWIKELQLRNFRNYGTVDTEFSPGLNVFIGNNAQGKTNFLEAIYFLALTRSHRTRTDKELIQFSKNNLQLIGKLNRISGALSLELQLSDKGRITKINALKQARLSDYIGTMMVVLFAPEDLQLIKGAPSLRRKFIDIDLGQIKPIYLSDLSNYNYVLKQRNTYLKTISTINSDFLSVLDEQLADYGSKVIKHRIDFIGELTREANKHHEAISNGLESLIITYESSVTQQDHQTIKEAFLLNLQKNRQRDIFKKNTSIGPHRDDIHFFINDMNANFASQGQHRSLILSLKMAEVSLMKEMTGDNPILLLDDVMSELDNTRQIKLLETVINENVQTFITTTSLDHLLHLPDKIKTFHVNQGTLKAD", - "output": "cytoplasm ; ATP binding ; single-stranded DNA binding ; DNA repair ; DNA replication ; SOS response" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MIPSVLLVTLLLLSWTSAEKDLKVRVARSTNDETNLHWVKCGGSVPDGAVSIQNTYVSPARTEYVCKSNCEAGYYSTKDSKCHYPFGRVEQTTSVCEILVNRDNFELLEWKEGYAGSLPANAVSTCKTNRIYVGKGAYGLGKIEPAHHCLYYGWNGAETWTKTYQALTVNKDVIEQTMKDVKYQTEGVTVIQGKPEVMRKSTVNNKQCKEVTKTVTLSKDISTEERWDVTNSVTFGVTTTVTAGIPDVASASLAVSMEARRDFAHGASKTESQSYMVTVSVPVPPKQSCTVSMVAQVNKADVPFTATLIRTYRGGKKTQTTTKGVYRTTQVAETHADVEQCTIIGDEKDCPKASK", - "output": "extracellular region ; hydrolase activity ; toxin activity" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MSETAPAAPAAPAPAEKTPVKKKARKAAGGAKRKTSGPPVSELITKAVAASKERSGVSLAALKKALAAAGYDVEKNNSRIKLGLKSLVSKGTLVQTKGTGASGSFKLNKKAASGEAKPKAKRAGAAKAKKPAGAAKKPKKAAGTATAKKSTKKTPKKAKKPAAAAGAKKAKSPKKAKATKAKKAPKSPAKAKTVKPKAAKPKTSKPKAAKPKKTAAKKK", - "output": "heterochromatin ; nucleosome ; nucleus ; ADP binding ; AMP binding ; ATP binding ; calcium ion binding ; chromatin DNA binding ; dATP binding ; DNA binding ; double-stranded DNA binding ; GTP binding ; nucleosomal DNA binding ; nucleotide binding ; structural constituent of chromatin ; chromatin organization ; chromosome condensation ; histone H3-K27 trimethylation ; histone H3-K4 trimethylation ; negative regulation of DNA recombination ; negative regulation of transcription by RNA polymerase II ; nucleosome assembly ; regulation of transcription by RNA polymerase II" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MATPAVPVSAPPATPTPVPAAAPASVPAPTPAPAAAPVPAAAPASSSDPAAAAAATAAPGQTPASAQAPAQTPAPALPGPALPGPFPGGRVVRLHPVILASIVDSYERRNEGAARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAVDMEFAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRMSIKAYVSTLMGVPGRTMGVMFTPLTVKYAYYDTERIGVDLIMKTCFSPNRVIGLSSDLQQVGGASARIQDALSTVLQYAEDVLSGKVSADNTVGRFLMSLVNQVPKIVPDDFETMLNSNINDLLMVTYLANLTQSQIALNEKLVNL", - "output": "cytosol ; eukaryotic 43S preinitiation complex ; eukaryotic 48S preinitiation complex ; eukaryotic translation initiation factor 3 complex ; eukaryotic translation initiation factor 3 complex, eIF3m ; membrane ; synapse ; cysteine-type deubiquitinase activity ; identical protein binding ; metal-dependent deubiquitinase activity ; translation initiation factor activity ; translation initiation factor binding ; formation of cytoplasmic translation initiation complex ; IRES-dependent viral translational initiation ; protein deubiquitination ; translational initiation" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MTTLRLLISDSYDPWFNLAVEECIFRQMPATQRVLFLWRNADTVVIGRAQNPWKECNTRRMEEDNVRLARRSSGGGAVFHDLGNTCFTFMAGKPEYDKTISTAIVLNALNALGVTAEASGRNDLVVKTPEGDRKVSGSAYRETKDRGFHHGTLLLNADLSRLANYLNPDKKKLQAKGIASVRGRVANLVELLPGITHEHICDAITEAFFSHYGERVEAEIISPDKTPDLPNFAETFARQSSWEWNFGQAPAFTHLLDERFIWGGVELHFDVEKGHITRTQVFTDSLNPAPLEALAGRLQGCLYRADMLQQECDALLVDFPEQEKELRELSAWIARAVR", - "output": "cytoplasm ; ATP binding ; lipoate-protein ligase activity ; protein lipoylation" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MLTLAHYLVLGAILFAIAIVGIFLNRRNIIIILMAIELMLLAVNTNFVAFSHYLGDVHGQIFVFFVLTVAAAEAAIGLAILVTLFRKLDTINVEDLDQLKG", - "output": "plasma membrane ; NADH dehydrogenase (quinone) activity ; quinone binding ; ATP synthesis coupled electron transport" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MLVLTRRVGEKIVIGEDIVITVLKIEGNSVKIGIEAPRHVKILREELYEELKSENIKASEVSKDDLKGVLKNDKGYKGPGTSS", - "output": "cytoplasm ; mRNA 5'-UTR binding ; bacterial-type flagellum organization ; mRNA catabolic process ; negative regulation of translational initiation ; regulation of bacterial-type flagellum assembly ; regulation of carbohydrate metabolic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MEVREIPLPAATKLAADYITGAFPAESGFAYAQADDEAFCRRLAYLQGRTYDREGLADYLRAYHRRFSASVATMANIEKLRNERSVVIVGGQQAGLLTGPLYTIYKIITIIQLAKEQERKLGVPVVPLFWIAGEDHDIAEIDHVYVVEEGEVKKAAYPHKTNEKRMAADVLLDRMAAKEWIERVVKTYGETDVTNELLFFLSSCLDEARTFVDFFAAIVLRLFADHGLVVLNAGDAAVRPLERRFFAALIERHRDVTAAVLAQQEALRTLGYAPLIEIGRDAANLFYYDGRERSLLQYDEERGLFHNKAGTLVWTREELLELAETNPARLSNNVVTRPLMQEHLLPTLAFVAGPGEIAYWAELKEAFPLFDLEMPPVVPRLQATIVSRSLQTDLSDIGLEVADVLTGRLDEAKREWREATAQAPLASAFAKAKADIDAAHRPLRELGVAIDRGLEGLVAKNAAILQAQIEFLQHALERALLRKHETEWRKFWRIETSLRPNGALQERVWNVFYYINRYGFDFVEKLLAIRSPGNGMHKIVYM", - "output": "ligase activity" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MKSTAESKETPSQDESTTSVPCTEAPLVEEGEEASFGAYKRIFTFAGRTELILQAVAILAACASGAGIALQNLIFGQFVTVITDFTNGISTPADFRDNAAELALYFVYLGIARLVLSYTYNTLLTYAAYRIVRNIRHAYLKAALSQEVAYYDFGSGGSIAAQATSNGKLIQAGASDKIGLLFQGLAAFVTLSLSRLWCKWKLTLICICIPVATIGTTGVVAAVEAGHETRILQIHAQANSFAEGILAGVKAVHAFGMRDSLVRKFDEYLVEAHKVGKKISPLLGLLFSAEYTIIYLGYGLAFWQGIHMFGRGEIGTAGDIFTVLLSVVIASINLTLLAPYSIEFSRAASAAAQLFRLIDRESEINPYGKEGLEPERVLGDVELENVTFSYPTRPGITVLDNFSLKVPAGKVTALVGQSGSGKSTIVGLLERWYNPTSGAIRLDGNLISELNVGWLRRNVRLVQQEPVLFQGSVFDNIRYGLVGTPWENASREEQMERVQEAAKLAYAHEFISELTDGYDTLIGERGGLLSGGQKQRVAIARSVVSQPKVLLLDEATSALDPHAETIVQKALDKAAEGRTTIVIAHKLATIRKADNIVVMSKGHIVEQGTHESLIAKDGVYAGLVKIQNLAVNASAHDNVNEEGEGEDVALLEVTETAVTRYPTSIRGRMNSIKDRDDYENHKHMDMLAALAYLVRECPELKWAYLVVLLGCLGGCAMYPGQAILMSRVVEVFTLSGDAMLDKGDFYASMLIVLAAGCLICYLAVGYATNTIAQHLSHWFRRLILHDMLRQDIQFFDREENTTGALVSRIDSYPHAILELMGYNIALVVIAVLQVVTCGILAIAFSWKLGLVVVFGGIPPLVGAGMVRIRVDSRLDRQTSKKYGTSSSIASEAVNAIRTVSSLAIEETVLRRYTEELDHAVSSSVKPMAATMICFGLTQCIEYWFQALGFWYGCRLVSLGETSMYSFFVAFLSVFFAGQASAQLFQWSTSITKGINATNYIAWLHQLQPTVRETPENHDKGPGSGAPIAMDNVRFSYPLRPDAPILKGVNLKINKGQFIAFVGSSGCGKSTMIAMLERFYDPTTGSITIDASTLTDINPISYRNIVALVQQEPTLFQGTIRDNISLGVFNPNTQPFFSDKDAVKSVSDEQIESALRAANAWDFVSSLPQGIYTPAGSGGSQLSGGQRQRIAIARALIRDPKILLLDEATSALDTESEKIVQKALEGAARDGDRLTVAVAHRLSTIKDANVICVFFGGKIAEMGTHQELIVRGGLYRRMCEAQALD", - "output": "plasma membrane ; ABC-type transporter activity ; ATP binding ; ATP hydrolysis activity" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MNSDDDSVFNDDLNDSEITNLIHNIPSSSSSCSSSKNKLQRNLYGEIIPEQYVEIDSSKGYTELPPTHHALNYENLSSYIYPTNFEVRDYQFNIVQRAFYDNLLVALPTGLGKTFIASTVMLNFTRWFPRGKIIFMAPTKPLVAQQIKACCGITGIPTSEVAILLDKSRRNRADIWDSKTVFFTTPQVVENDLTAGIIDPKEVVLLVIDEAHKSKGNYAYNNVVKFITRFNISFRILALTATPASDVEGVQEIIDNLSISKVEVRTEQSIDITKYMKQKKIERVTVSPSVEICELVDMLCTAIQPVLSMANERRIYDMSDPSKINAFQVIDASQRLLKNPTIPEGLKWQNYFILQILNVVGQALRRLNIYGIKSFYNYFDQKHKEFTIKFKNKKSNNQTAARFYFHDNIKLILDKCKELIADDNFLGHPKLEILINELDEFFKENEANDSRVIIFTEFRESALDIVSSIERIGSNLRPHIFIGQSKEKEKFDEEAYLSKGKKGRTKGKATKGKQNSETPERSTSRTSSEDAQIKGMNQKLQKDLIKKFKKGEYNILVATSIGEEGLDIGEVDLIVCYDSTSSPIKNIQRMGRTGRKRDGKVLLLFAGNEESKFDKAMAGYEFIQQHIMNGRLITLAQSNRIIPKSYKPIVEKKFIEIPEENTEIKAEEDEDEIIRIATSYMNNKGKKVTKSKSKSKSNSKSKKIEKRFFMPDNVTTGFQNVTSMVRKADSDKSVADKRREKDLLDKLLDSDTEDELLIQSKKSPVKENQSKRPNSEHICEEDSRQETENNSNESNGSFENENDQNKESGVSYPLSYRQTPPKLGIRRLSPQVSMNINLDAPVATEEAAPLVTGKSTSPPENVAEKRNSPILNSSNRECAPKQKTLGLKRRKANSITDQLKRHYSRVIKPNTAYRTITVSDDEKSVEDSINNQQLHKNKNLGSTSDDDDAFDEGDVFDDGMDDELALIANDKLSSFERSLSPNLPAQNNASDEVYKHEFSPGEGVLNQEQMLELYTSYFSLLDPADRVDFYDPLNFNQKPNTSINHRGRIGHSQVSRRLLQSSKFIGSVSTTTAKNIVKRYAQTYNTTNHQHNMHIVQEITNSSSK", - "output": "nucleus ; 3'-5' DNA helicase activity ; ATP binding ; ATP hydrolysis activity ; DNA binding ; DNA repair" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MNTDDVLAVFREAGAILEGHFILTSGLRSPVFLQKARVFMHADKTEKLCKALAEKIRAADLGPIDYVVGPAIGGLIPSYETSRHLGVPSVWVERENGVFRLRRFDVPKGARVVIVEDIVTTGLSIRETIDCMKDLGIEVVAAACIVDRSAGKADVGTRLISLAAYEVPAYPADKLPPELAAIPAVKPGSRNI", - "output": "magnesium ion binding ; orotate phosphoribosyltransferase activity ; 'de novo' UMP biosynthetic process ; pyrimidine nucleobase biosynthetic process" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MPYRKYREKKYETKYREAFKLFQEKIGITFTDEKLLIQAFTHSSYVNEHRKKPHEDNERLEFLGDAVLELTVSQYLFQKYPTMSEGELTKLRAAIVCEPSLVRFANELSFGSLVLLGKGEEMTGGRERPALLADVFEAFIGALYLDQGLETVWGFLKEIVYPKINEGAFSHVMDYKSQLQELIQRDGSGNIEYQILQEKGPAHNREFVSRVTLNNVALGLGSGKSKKEAEQQAAAEALKKLKEQL", - "output": "cytoplasm ; metal ion binding ; ribonuclease III activity ; rRNA binding ; mRNA processing ; rRNA processing ; tRNA processing" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MLTLYGETFPSRLLLGTAAYPTPEILKQSVRTARPAMITVSLRRTGCGGEAHGQGFWSLLQETGVPVLPNTAGCQSVQEAVTTAQMAREVFETDWIKLELIGDDDTLQPDVFQLVEAAEILIKDGFKVLPYCTEDLIACRRLLDAGCQALMPWAAPIGTGLGAVHAYALKILRERLPDTPLIIDAGLGLPSQAAQVMEWGFDGVLLNTAVSRSGDPVNMARAFALAVESGRLAFEAGPVEARTKAQASTPTVGQPFWHSAEY", - "output": "cytoplasm ; thiazole synthase activity ; thiamine diphosphate biosynthetic process" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MGVIHEETAYRKPVPGGDPGAGSGAADHRDSAGRLSRWEATGDVRNVAGTDQGRSVASGASRVGRVRGQELARGVRAGNGGSAGTSGVHRPEVGSGRQEKTGNQTMKTLVTANQKGGVGKTSTLVHLAFDFFERGLRVAVIDLDPQGNASYTLKDFATGLHASKLFGAVPAGGWTETAPAAGDGQAARLALIESNPVLANAERLSLDDARELFGANIKALANQGFDVCLIDTAPTLGVGLAAALFAADYVLSPIELEAYSIQGIKKMVTTIANVRQKNAKLQFLGMVPSKVDARNPRHARHQAELLAAYPKMMIPATVGLRSSIADALASGVPVWKIKKTAARKASKEVRALADYVFTKMEISQ", - "output": "DNA replication" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MPSARGKSKSKAPITFGDLAIYFSQEEWEWLSPIQKDLYEDVMLENYRNLVSLGLSFRRPNVITLLEKGKAPWMVEPVRRRRAPDSGSKCETKKLPPNQCNKSGQSICQKLVSAQQKAPTRKSGCNKNSVLVKPKKGHSGKKPLKCNDCGKTFSRSFSLKLHQNIHTGEKPFECSNCRKAFRQISSILLHQRIHSGKKSHECNKCGESFNQRTTLILHMRIHDGKEILDCGKALSQCQSFNIHQKIHVVGNVCQCRKCGKAFNQMSSLLLHKKIHNGKKTHKYNKCGRGFKKKSVFVVHKRIHAGEKIPENAKALSQSLQQRSHHLENPFKCRKCGKLFNRISPLMLHQRIHTSEKPYKCDKCDKFFRRLSTLILHLRIHNGEKLYRCNKCEKVCNRHSSLIQHQKVHTKKKKLFECKECGKMFSGTANLKIHQNIHSEEKPFKCNKCSKVFGRQSFLIEHQRIHTGEKPYQCEECGKAFSHRISLTRHKRIHTEDRPYECDQCGKAFSQSAHLAQHERIHTGEKPYTCKTCGKAFSQRTSLILHERSHTGEKPYECNECGKAFSSGSDLIRHQRSHSSEKPYECSKCGKAYSRSSSLIRHQNTHSEEKA", - "output": "nucleus ; DNA-binding transcription factor activity ; metal ion binding ; RNA polymerase II cis-regulatory region sequence-specific DNA binding ; regulation of transcription by RNA polymerase II" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MNPSEVASAGIHPIELCVHSILSSNLEGIYQAITELRESQALLVMKFNQVKKSFMDEQELLQEEGSLKEELARVNQLKKRLDKLTELYAELARKCGAL", - "output": "BLOC-1 complex ; endosome ; endosome organization ; regulation of protein localization" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MADAAMSGEEKEEDGGKRTTAATPAETLGFYEPSDGSRVETKKRSLSDLSLLRFISAELTRGYFLENNEAKYKERREKVYTCLRIPRELEKLMVFGFFLCLDAFLYVFTLLPLRVLLALIRFLTLPCCGLSDGRVLQPAQVCDVLKGVILVICYFIMHYVDYSMMYHLIRGQSVIKLYIIYNMLEVADRLFSSFGQDILDALYWTATEPKERKRAHLGVIPHFFMAVLYVILHAILILVQATTLNVAFNSHNKSLLTIMMSNNFVEIKGSVFKKFEKNNLFQMSNSDIKERFTNYVLLLIVCLRNMEQFSWNPDHLWVLFPDVCMVIASEIAVDVVKHAFITKFNDITADVYSEYRASLAFELVSSRQKNACTDYSDSVSRRMGFIPLPLAVLLIRVVTSSVKVQGILAYSCVVLFYFGLITLKVLNSIVLLGKSCQYIKDANMEEKLFQPPTCQPGKTPKKAQNKSKPNQGHPPDETANTSVTSQPTKAASTAQLLVESNSDKLLTTPDAEEKDISGDNSELKQKQADKDLLDIDRFTICGNRID", - "output": "centrosome ; ciliary basal body ; cytoplasm ; membrane ; cartilage development ; cell projection organization ; neural crest cell development ; ossification ; positive regulation of bone development ; positive regulation of cartilage development ; positive regulation of cilium assembly" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MKRFWAMVCALFLSVSLLLTSCANVPTGLTGNFREDTLALISSLREAIALPENDPNKKAAQAEARKKLNDFFALYRRDDSLRSLSSFMTMQTALNSLAGHYSSYPNRPLPEKLKARLEQEFKQVELALDREAKS", - "output": "photosystem II ; plasma membrane-derived thylakoid membrane ; thylakoid ; thylakoid lumen ; photosystem II assembly ; photosystem II repair" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MDRGAAAAQGTAPPQDGEQPAESPEPPPPWPPPPPPPAPPPAPPLLSEASPEPIPEPCPELAPGPCPEATSESATELYTEPTPEPATEPASEPAPEPATEPAPEPATEPAPEPAPEPATESAPEPTPEPALESVPEPAPELTPEVAPELAPEPTPEPVTELAPEFCPEAAPEFRPSPAPCLLQCPVDTRERGLKTSPSPSPSPSPRTPMSWSRIKKILKEGPMLKNCNSFKRWKLRYFLVQGQKLYFAHHPAFAHFETIDLSQATVAESSCRNLCHSFCVITPQRKITLAAPNRKDMEEWINIIKTIQQGEIYKIPAAENNPFLVGMHCWYSSYSHRTQHCNVCRESIPALSRDAIICEVCKVKSHRLCALRASKDCKWNTLSITDDLLLPADEVNMPHQWVEGNMPVSSQCAVCHESCGSYQRLQDFRCLWCNSTVHDDCRRRFSKECCFRSHRSSVIPPTALSDPKGDGQLVVSSDFWNLDWSSACSCPLLIFINSKSGDHQGIVFLRKFKQYLNPSQVFDLLKGGPEAGLSMFKNFARFRILVCGGDGSVSWVLSLIDAFGLHEKCQLAVIPLGTGNDLARVLGWGAFWNKSKSPLDILNRVEQASVRILDRWSVMIRETPRQTPLLKGQVEMDVPRFEAAAIQHLESAATELNKILKAKYPTEMIIATRFLCSAVEDFVVDIVKAWGQIKQNNTAIVSVILKSDLMYDRLSVLIDVLAEEAAATSAEKSATEYADSSKADRKPFIPQIDHIAKCKLELATKAQSLQKSLKLIIFQVEQALDEESRQTISVKNFSSTFFLEDDPEDINQTSPRRRSRRGTLSSISSLKSEDLDNLNLDHLHFTPESIRFKEKCVMNNYFGIGLDAKISLDFNTRRDEHPGQYNSRLKNKMWYGLLGTKELLQRSYRKLEERVHLECDGETISLPNLQGIVVLNITSYAGGINFWGSNTATTEYEAPAIDDGKLEVVAIFGSVQMAMSRIINLHHHRIAQCHEVMITIDGEEGIPVQVDGEAWIQRPGLIKIRYKNAAQMLTRDRDFENSMKMWEYKHTEIQAAPQPQLDFQDSQESLSDEEYAQMQHLARLAENLISKLNDLSKIHQHVSVLMGSVNASANILNDIFYGQDSGNEMGAASCIPIETLSRNDAVDVTFSLKGLYDDTTAFLDEKLLRSAEDETALQSALDAMNKEFKKLSEIDWMNPIFVPEEKSSDTDSRSLRLKIKFPKLGKKKVEEERKPKSGQSVQSFIGNLWHRRHREDEAEGDDPLTPSRSQL", - "output": "plasma membrane ; ATP binding ; diacylglycerol kinase activity ; metal ion binding ; diacylglycerol metabolic process ; intracellular signal transduction ; lipid phosphorylation ; platelet activation ; protein kinase C-activating G protein-coupled receptor signaling pathway ; response to oxidative stress" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MKFAVSSKGDQVSDTLKSKIQAYLLDFDMELDENEPEIVISVGGDGTLLYAFHRYSDRLDKTAFVGVHTGHLGFYADWVPHEIEKLVLAIAKTPYHTVEYPLLEVIVTYHENEREERYLALNECTIKSIEGSLVADVEIKGQLFETFRGDGLCLSTPSGSTAYNKALGGAIIHPSIRAIQLAEMASINNRVFRTVGSPLLLPSHHDCMIKPRNEVDFQVTIDHLTLLHKDVKSIRCQVASEKVRFARFRPFPFWKRVQDSFIGKGE", - "output": "cytoplasm ; ATP binding ; metal ion binding ; NAD binding ; NAD+ kinase activity ; NAD metabolic process ; NADP biosynthetic process ; phosphorylation" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MIEITLLGTGSPIPDPDRAGPSTLVRAGGQVFLVDCGRGVLQRAAAVGVGAAGLSAVLLTHLHSDHIAELGDVLITSWVTNFAADPAPLQVIGPPGTAETVDAMLKAFGRDIGYRIAHHADLNAPPPIEVHEYTDGTVWDRDGVAIRVAPTDHRPVAPTIGFRVEFDGASAVLAGDTVPCPSLDELAAGAGALVHTVIRKDIITNFPQQRVKDICDYHSSVQEAAATAARAGVGTLVMTHYVPAIIAGQEDQWRALAATEFGGRIELGNDLHRVEVHAR", - "output": "3'-tRNA processing endoribonuclease activity ; metal ion binding" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MSQAYSSSQRVSSYRRTFGGAPGFPLGSPLSSPVFPRAGFGSKGSSSSVTSRVYQVSRTSGGAGGLGSLRASRLGTTRTPSSYGAGELLDFSLADAVNQEFLTTRTNEKVELQELNDRFANYIEKVRFLEQQNAALAAEVNRLKGREPTRVAELYEEELRELRRQVEVLTNQRARVDVERDNLLDDLQRLKAKLQEEIQLKEEAENNLAAFRADVDAATLARIDLERRIESLNEEIAFLKKVHEEEIRELQAQLQEQQVQVEMDMSKPDLTAALRDIRAQYETIAAKNISEAEEWYKSKVSDLTQAANKNNDALRQAKQEMMEYRHQIQSYTCEIDALKGTNDSLMRQMRELEDRFASEASGYQDNIARLEEEIRHLKDEMARHLREYQDLLNVKMALDVEIATYRKLLEGEESRINLPIQTYSALNFRETSPEQRGSEVHTKKTVMIKTIETRDGEVVSEATQQQHEVL", - "output": "cardiac myofibril ; cell-cell junction ; cytosol ; extracellular exosome ; fascia adherens ; intercalated disc ; intermediate filament ; intermediate filament cytoskeleton ; neuromuscular junction ; nucleus ; sarcolemma ; Z disc ; cytoskeletal protein binding ; identical protein binding ; structural constituent of cytoskeleton ; cytoskeleton organization ; intermediate filament organization ; muscle contraction ; regulation of heart contraction ; skeletal muscle organ development" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MSKRSLDPSDDFKGQKRLAIDPESTALEQDRQMLQQLSEQNSELEPQNVAPNAEIPLGFDLSGIQFNMTPDFYLRMNQGMDYAFNQPNPIATPQQLLRTSLIPTLGNLSNIILSILGKPVQEASAIVTNPASEMGMAFTKVMNMFRMVKDIYTEESFIYSSAIGMRTPSQRSTTRRANLAIFLAAVYGALQIGFFHLNENFLEVFAPDESNILTNQGTLYMELKTQAYISAMAQAERPKGDILNDLFPSDMAHRFLIRRNAKLDDKLTYVEKQIIEKCTARKERLANFSPQEALNEVYPWGKFLSEIACYIHNNYSSISAIPIPANSFKRRSKKNGLRFKAGEAESSPSESGSDLTDSLAFGIPSSTFDGSSETQNVSSVVLYDQVRHMTNNNLNNKRTRRVANRRSWTKEEEEALLDGLDLVKGPRWSQILELYGPGGKKSEVLKYRNQVQLKDKARNMKLFFLKSGQVVPAALQCVTGDLRRD", - "output": "chromatin ; chromosome, telomeric repeat region ; nucleus ; double-stranded telomeric DNA binding ; protein homodimerization activity ; cell cycle ; telomere maintenance ; telomere maintenance via telomere lengthening" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MKVLFLTIALSLFSILQAQDSSSSEEQFEGTYFVKAIVTDSEFFEKNKPKALSPLTVTHLSNGDLEAKFTTNMNGICEEIKMKFEKTDKPGIFSTNDGSRQVLIEKTSVRDHWILFCEGELHGMQVRIAKLLGPHTDENPKAFQEFKKFVSLKRFNEEKINIPRQTETCIPEHV", - "output": "extracellular region ; small molecule binding" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "SGLQFAVLDGQGFLPFSRV", - "output": "extracellular region ; neuropeptide signaling pathway" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MDNAVDRHVFYISDGTAITAEVLGHAVMSQFPVAINSITLPFVENESRAKAVKEQIDAIFQQTGTRPLVFYSIVIPEIRDIILQSEGFCQDIVQALVAPLQGELKLDPTPIAHRTHGLNPGNLIKYDARIAAIDYTLAHDDGISMRNLDQAQVILLGVSRCGKTPTSLYLAMQFGIRAANYPFIADDMDNLVLPPALKPLQHKLFGLTINPERLAAIREERRENSRYASMRQCRMEVSEVEALYRKNQIPWLNSTNYSVEEIATKILDIMGLNRRMY", - "output": "ADP binding ; ATP binding ; phosphotransferase activity, phosphate group as acceptor ; protein serine/threonine kinase activity ; protein dephosphorylation ; protein phosphorylation" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQAPGQHGARKPRLSDYGVQLREKQKVRRIYGVLERQFRNYYKEAARLKGNTGENLLALLEGRLDNVVYRMGFGATRAEARQLVSHKAIMVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAGKMEGTFKRKPERSDLSADINEHLIVELYSK", - "output": "small ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MAVIKMKPTSPGQRGAVKISRDHLFKGAPHAPLLEPQFQKAGRNNNGHITIRHRGGGAKHHYRVVDFVRNKDGIPAKVERIEYDPNRTAHIALVCYADGERRYIIAPRGLEAGATLLSGSEAPIRAGNTLPIRNIPVGSTIHCIELQPGKGAQIARSAGTSATLLAREGVYAQVRMRSGEVRRIHIECRATIGEVANEEHSLRQLGKAGVKRHMGIRPTVRGVVMNPVDHPHGGGEGKTGEGRHPVDPWGNLTKGYRTRNNKRTQVFIVSRRKK", - "output": "large ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; transferase activity ; translation" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MQKIKSLMTRQGLKSPQESLSDLGAIESLRVPGKEEFRELREQPSDPQAEQELINSIEQVYFSVDSFDIVKYELEKLPPVLNLQELEAYRDKLKQQQAAVSKKVADLILEKQPAYVKELERVTSLQTGLQLAAVICTNGRRHLNIAKEGFTQASLGLLANQRKRQLLIGLLKSLRTIKTLQRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVALSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNTDTKFQKLQYKDLCTHVTPDSYIPCLADLCKALWEVMLSYYRTMEWHEKHDNEDTASASEGSNMIGTEETNFDRGYIKKKLEHGLTRIWQDVQLKVKTYLLGTDLSIFKYDDFIFVLDIISRLMQVGEEFCGSKSEVLQESIRKQSVNYFKNYHRTRLDELRMFLENETWELCPVKSNFSILQLHEFKFMEQSRSPSVSPSKQPVSTSSKTVTLFEQYCSGGNPFEIQANHKDEETEDVLASNGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDGPVKSVSRETLKSRKKSDYSLNKVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAIYTFFGRNDSLESTGLGLSSSRLRTTLNRIQESLIDLEVSADPTATLTAAEERKEKVPSPHLSHLVVLTSGDTLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAVKKPFLQQFYSQTVSTASELRKPIYWIVAGKALDYEQMLLLMANVKWDVKEIMSQHNIYVDALLKEFEQFNRRLNEVSKRVRIPLPVSNILWEHCIRLANRTIVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPIPDKEFVETYIKAYYLTENDMERWIKEHREYSTKQLTNLVNVCLGSHINKKARQKLLAAIDDIDRPKR", - "output": "EARP complex ; extracellular exosome ; membrane ; perinuclear region of cytoplasm ; recycling endosome ; SNARE binding ; endocytic recycling ; protein transport" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MSDSLRIIFAGTPDFAARHLDALLTSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVFQPVSLRPQENQHLVADLHADVMVVVAYGLILPKAVLDMPRLGCINVHGSLLPRWRGAAPIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLACPITAEDTSGSLYNKLAELGPQGLITTLKQLADGTATPEAQNEALVTHAEKLSKEEARIDWSLSAAQLERCIRAFNPWPMSWLEIDGQPVKVWQASVIEDATQSLPGTILAATKQGIQVATGKGILNLLSLQPAGKKAMSAQDLLNSRREWFIPGNRLA", - "output": "methionyl-tRNA formyltransferase activity" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MSMSTSTEVIAHHWAFAIFLIVAIGLCCLMLVGGWFLGGRARARHKNVPFESGIDSVGTARLRLSAKFYLVAMFFVIFDVEALYLFAWSTSIRESGWVGFVEAAIFIFVLLAGLVYLARIGALDWTPARSRRERMNPETNSIANRQR", - "output": "plasma membrane ; NADH dehydrogenase (ubiquinone) activity ; quinone binding" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "HEPCGESCVFIPCITTVVGCSCKNKVCYD", - "output": "defense response" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MAVEKTNSSSSLAEVIDRILDKGIVIDAWARVSLVGIELLAIEARVVIASVETYLKYAEAVGLTQXAXXAX", - "output": "gas vesicle shell ; vacuole ; vesicle membrane ; structural molecule activity" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MDVRRRSEEAVYSSKVFAADEKPLKPHKQQQEEDNTLLIDASDALPLPLYFTNGLFFTMFFSVMYFLLSRWREKIRNSTPLHVVTLSELGAIVSLIASVIYLLGFFGIGFVQTFVARGNNDSWDEEDENDEQFILEEDSRRGPCAAATTLGCAVPTPPAKHIAPIVPQQPAVSIAEKPAPLVTPAASEEDEEIIKSVVQGKIPSYSLESKLGDCKRAASIRKEVLQRITGKSLEGLPLDGFNYESILGQCCEMTIGYVQIPVGIAGPLLLNGREYSVPMATTEGCLVASTNRGCKAIYASGGATSILLRDGMTRAPCVRFGTAKRAAELKFFVEDPINFETLANVFNQSSRFARLQRIQCAIAGKNLHMRFVCSTGDAMGMNMVSKGVQNVLDYLQNEYADMDVIGISANFCSDKKPAAVNWIEGRGKSVVCEAIITEEVVKKVLKTEVAALVELNMLKNLTGSALAGALGGFNAHASNIVSAVYIATGQDPAQNIESSHCITMMEAVNDGKDLHISVTMPSIEVGTVGGGTQLASQSACLNLLGVKGANREAPGSNARLLATIVAGSVLAGELSLMSAISAGQLVNSHMKYNRSTKDVTKASS", - "output": "endoplasmic reticulum membrane ; hydroxymethylglutaryl-CoA reductase (NADPH) activity ; coenzyme A metabolic process ; isoprenoid biosynthetic process" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MAEVEHQDTVNHRVLVSLKEAARIIGAQGMTIQKIRESSKVKIGISPHERGCSDRILSCSGSAQGVANAIGDVVEVLNQDDSEPETHSYKPLNFILPAPSATEIQDPESVKRIGNLRLIVSNSQVSSIIGTQGSRIKSLIEKHGVKVVASKNFLPDSQDRVVEIQGFPGAIASCLVDISEILAAEPKPSHEKQYYPHTKSQEEGSVTKDVAIPVEYVGALLGRGGNRVSSLRKYTKTKVIVSDEPDEENNRVFTITGNNQNSVKLAETMLLKNLETEKQRREDKV", - "output": "chromosome, telomeric region ; nucleus ; P-body ; RNA binding ; chromatin organization ; mRNA transport ; regulation of translation" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MARNIKMATDAQNWLQARGSHVNESYLGVARPILEITYPPVELVKNAVRIMEHKSGVARSVWTARLNGCQIIWR", - "output": "host cell cytoplasm" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MADRPLTQQRLRKSFGKIAKIVDIPNLIEMQRISYQRFLQMDVPPEKRETIGLQAVFHSVFPIRDFSGTASLEFVSYRFGEIKYSVEDCVHRGMTYEVPIRITVRLVVFDVDKEKGIQNIRDIKEQEIYFGTIPLMTEQGTFVINGTERVVVSQLHRSSGVFFDHDKGKSHASGKVIYTARIIPVRGSWIDMEIDPKDVLYIRIDRRRKFPATLLFKAFGYSTEDLLNYFYQTEKLTLTPKTLFKEFDAKTLRGQRASITVKMPDSDEVIVKKGRLFTQRAVKTMAQAGIEKVAILQEDLEDKVLARRVLDPKTGEVLYPANHEIDEATLEAMRDAGVQKFEILYSAPGTGGDSVRKALLLDKVESREEALVEIYRRLRPSNPSTVEVAKDFIDQLFFRPSHYDLSAVGRMKLNMRLGLDTPVEVKTLRREDILLTAKTLVDLKDSQGAVDDIDHLGNRRVRAVGELLENQYRIGLVRMERAIKERMSLQEIDALMPNDLINPKPVSAVVKEFFGTSQLSQFMDQTNPLSEVTHKRRLSALGPGGLTRERAGFEVRDVHPSHYGRICPIETPEGPNIGLIVSLSTYARVNEFGFVETPYRVVTEGQATKEIKYLSAMEEKDLPIAQANAPLDEEGFFINPTVSSRVEGELTIVKKEDVKLMDISPNQLVSVSSSMIPFLENDDANRALMGSNMQRQAVPLLATEAPLIGTGLERVVARDSGVTLVAKRDGKVVAVDASRIVLQHEDERKDRMDKQVTIYNLSKFTRSNQNTCFNQRPIVKLGQEVKAGDIIADGPATENGELALGRNVTVAFLPWGGYNFEDSILVSERLVRDGVFTSVHIEEFEVVSRDTKLGKEEITRDIPNVGEEALKNLDDSGIVRLGAEVRPGDILVGKITPKGETQLSPEEKLLRAIFGEKAGDVKDTSLRVPPGVEGVVVDAKVFARRGVEKDDRTRLIEDEEIAALEKDRDDELKIMEDTVRSKLITIVLGQEATAPVKKGKAVLIPKGQPITAEMLEDCPLAPLEALVLKDEDHSERVHELLEIYREQRESVQMSFEEQVNRYQKGDDLPPGVIKMVKIYVAMKRRLSVGDKMAGRHGNKGVVSCILPQEDLPYFENGTPVDMVLNPLGVPSRMNVGQILEIHLGRAAKSLGDQIEALLEEQKLDGLRQKMQEIFSSDADEVAGLTEQELLEVAGQYKRGVHMATPVFDGAKEDEITDLLSSAGVSPSGQAVLYDGRTGERFKGEITVGTMYMLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRLGEMEVWAMEAYGAAYALQEFLTVKSDDMVGRTRMYEKIVKGQNVLEPGMPESFNVLVKELQSLGLEMSLIEEAK", - "output": "DNA-directed RNA polymerase complex ; DNA binding ; DNA-directed 5'-3' RNA polymerase activity ; ribonucleoside binding ; DNA-templated transcription" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MRLFIALPVLIVVVAMTLEGPAPAQAAPDLSGTLESIPDKLKEFGNTLEDKARAAIEHIKQKEILTKTRAWFSEAFGKVKEKLKTTFS", - "output": "endoplasmic reticulum ; extracellular region ; high-density lipoprotein particle ; very-low-density lipoprotein particle ; fatty acid binding ; lipase inhibitor activity ; phospholipase inhibitor activity ; cholesterol efflux ; cholesterol metabolic process ; chylomicron remnant clearance ; lipoprotein metabolic process ; negative regulation of cholesterol transport ; negative regulation of fatty acid biosynthetic process ; negative regulation of lipid catabolic process ; negative regulation of lipid metabolic process ; negative regulation of lipoprotein lipase activity ; negative regulation of phosphatidylcholine catabolic process ; negative regulation of receptor-mediated endocytosis ; negative regulation of very-low-density lipoprotein particle clearance ; phospholipid efflux ; plasma lipoprotein particle remodeling ; regulation of lipid transport ; triglyceride metabolic process ; very-low-density lipoprotein particle clearance" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MTNTPQSHPLIKIVNHSFIDLPAPSNISAWSNFGSLLGVCLGLQLLTGLFLAMHYTADTTTAFSSVTHICRDVNYGWLIRYMHANGASMFFIFLYFHIGRGIYYGSYTFMDTWNIGVLLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGPTLVEWIWGGFSVDKATLTRFFAFHFILPFIITAMVMIHLLFLHETGSNNPSGMNSDSDKIPFHPYYTIKDILGILFMMITLMSLVMFTPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVFSILILMLFPILHSSKQRSMSFRPLSQCLMWMLVANLLILTWIGGQPVEHPFITIGQLASVTYFFIILILMPSTALMENKLLKW", - "output": "mitochondrial inner membrane ; respiratory chain complex III ; metal ion binding ; ubiquinol-cytochrome-c reductase activity ; respiratory electron transport chain" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MYSSPLCLTQDEFHPFIEALLPHVRAFAYTWFNLQARKRKYFKKHEKRMSKDEERAVKDELLGEKAEVKQKWASRLLAKLRKDIRPECREDFVLAITGKKAPGCVLSNPDQKGKMRRIDCLRQADKVWRLDLVMVILFKGIPLESTDGERLVKAAQCGHPVLCVQPHHIGVAVKELDLYLAYFVRERDAEQSGSPRAGMGSDQEDSKPITLDTTDFQESFVTSGVFSVTELIQVSRTPVVTGTGPNFSLGELQGHMAYDLNPASTGMRRTLPSTSSSGSKRHKSGSMEEDVDTSPGGDYYTSPSSPTSSNRNWTEDMEGGISSPVKKTEMDKSPFNSPSPQDSPRLSSFTQHHRPVIAVHSGIARSPHPSSALHFPTTSILPQTASTYFPHTAIRYPPHLNPQDPLKDLVSLACDPASQQPGPLNGSGQLKMSSHCLSAQMLAPPPPGLPRLALPPATKPTSEGGSSSPTSPSYSTPGTSPANRSFVGLGPRDPTGIYQAQSWYLG", - "output": "nucleus ; DNA-binding transcription factor activity, RNA polymerase II-specific ; RNA polymerase II cis-regulatory region sequence-specific DNA binding ; DNA replication ; positive regulation of DNA-templated transcription ; regulation of transcription by RNA polymerase II" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MKAFSCLLAVIATAASLFQHVDASHARDKLNNISRVERPVIHTPSRRVHAHSHFDLTFDLYPRRNRIKLQLEPNHDVLSHNARVTFLDTEGNVDRIERIERRDHSVFKGWAWTQAKSGVWERVGWARIIMHRDGEDPLFEGVFTVMHDHHQVIAKSKYVRKRHQQDPPLDNTPGEYMLLFRGSDIAQTQSTGNVERSIMSSPSCDADTLAYDSNSNFMFPPLPEENNTSIWNYFMTSIGKRQMTDTGGVVPGSRDLKETIGSTSGCPNTRKVALIGVVADCTYTNTFASEMDARADIISVVNAASVVYEHSFNISLTLGEINILPKNCPATASSATPFNQQCDDRAGGGSFTLADRLNTFSAWRGKKTDDFAFWTLMTDCTTENQVGLAWAAQLCVKGVQGNPDSRNSSSQAVAGANVVSKTDNTWQVFAHEAGHIFGAVHDCDSMLCQNPANPDNSRCCPATASTCDARGRFMMNPTSGSQITNFSPCSIGQICSRMARRTILTNCLTTNRGVDTISGQQCGNGIVEDGEDCDCGDEESCKGNTCCDPKTCKYTSGSQCDDANEECCKGCKFASSSTICRTSSGPCDPEEKCSGNSGDCPHDIHSKDGGTCGTDLQCASGQCTSRDLQCQMHLGNQVAGSRTVAFDSYGCEVACKDPDRPNVRYEGSLTFLDGTPCGGGGTCKNGQCSGSTFGNEVSDWVSRHKPIVIGVAVGAGCLLLLAIASCICGRSRRQRPRNRKMPPINMRPMAPAYNGWNGAPPNAQQSSPGGHPPYNNIPPPINAPPPAYPGHMPPTRYA", - "output": "membrane ; metal ion binding ; metalloendopeptidase activity ; proteolysis" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MAADKRDYYEVLGVHKNASDTEIKKAFRKLAIQYHPDKNPDDKEAEEKFKEITEAYEVLSDPQKRAQYDQFGHAGVGAGGFSGGGFGGFGAGTPFGDIFGDIFGDIFGGRPRGSRGRRGDDLQYNMELSFEEAAFGAEKEIQVPYGKRCGDCGGSGAKPGTEPKVCPTCRGAGQVRFQQGFFSVSKTCNHCNGEGRVVENPCTSCRGSGMIRDTKTLSVKVPAGVETGTRLKLSGEGGQGIKGGGNGDLYVAIAVREHPIFTREDNDVLCEIPVSFVQAALGCEIEVPTLDGKVSMKIPEGTQSGRIFRLRGKGVPQLQGYGRGDQLVIIKVETPSNLNKRQRELLEEFARISGEDVHPMKKSFFDKVMDFIS", - "output": "cytoplasm ; ATP binding ; heat shock protein binding ; unfolded protein binding ; zinc ion binding ; chaperone cofactor-dependent protein refolding ; DNA replication ; protein refolding ; response to heat" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MTDKRKDGSGKLLYCSFCGKSQHEVRKLIAGPSVYICDECVDLCNDIIREEIKEVAPHRERSALPTPHEIRHHLDDYVIGQEQAKKVLAVAVYNHYKRLRNGDTSNGVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAKSDKASEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQALFNLEGVDLEFRDEALDAIAKKAMARKTGARGLRSIVEAALLDTMYDLPSMEDVEKVVIDESVIEGQSKPLLIYGKPEAQQASGE", - "output": "ATP binding ; ATP hydrolysis activity ; ATP-dependent protein folding chaperone ; protein dimerization activity ; unfolded protein binding ; zinc ion binding" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MSKTYVGSRVRQLRNERGFSQAALAQMLEISPSYLNQIEHDVRPLTVAVLLRITEVFGVDATFFASQDDTRLVAELREVTLDRDLDIAIDPHEVAEMVSAHPGLACAVVNLHRRYRITTAQLAAATEERFSDGSGRGSITMPHEEVRDYFYQRQNYLHALDTAAEDLTAQMRMHHGDLARELTRRLTEVHGVRINKRIDLGDTVLHRYDPATNTLEISSHLSPGQQVFKMAAELAYLEFGDLIDAMVTDGKFTSAESRTLARLGLANYFAAATVLPYRQFHDVAENFRYDVERLSAFYSVSYETIAHRLSTLQRPSMRGVPFTFVRVDRAGNMSKRQSATGFHFSSSGGTCPLWNVYETFANPGKILVQIAQMPDGRNYLWVARTVELRAARYGQPGKTFAIGLGCELRHAHRLVYSEGLDLSGDPNTAATPIGAGCRVCERDNCPQRAFPALGRALDLDEHRSTVSPYLVKQL", - "output": "plasma membrane ; DNA binding ; DNA-binding transcription factor activity ; regulation of DNA-templated transcription ; response to hypoxia" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MKTRQNKDSMSMRSGRKKEAPGPREELRSRGRASPGGVSTSSSDGKAEKSRQTAKKARVEEASTPKVNKQGRSEEISESESEETNAPKKTKTEQELPRPQSPSDLDSLDGRSLNDDGSSDPRDIDQDNRSTSPSIYSPGSVENDSDSSSGLSQGPARPYHPPPLFPPSPQPPDSTPRQPEASFEPHPSVTPTGYHAPMEPPTSRMFQAPPGAPPPHPQLYPGGTGGVLSGPPMGPKGGGAASSVGGPNGGKQHPPPTTPISVSSSGASGAPPTKPPTTPVGGGNLPSAPPPANFPHVTPNLPPPPALRPLNNASASPPGLGAQPLPGHLPSPHAMGQGMGGLPPGPEKGPTLAPSPHSLPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSSSSSASPFPASQALPSYPHSFPPPTSLSVSNQPPKYTQPSLPSQAVWSQGPPPPPPYGRLLANSNAHPGPFPPSTGAQSTAHPPVSTHHHHHQQQQQQQQQQQQQQQQQQQHHGNSGPPPPGAFPHPLEGGSSHHAHPYAMSPSLGSLRPYPPGPAHLPPPHSQVSYSQAGPNGPPVSSSSNSSSSTSQGSYPCSHPSPSQGPQGAPYPFPPVPTVTTSSATLSTVIATVASSPAGYKTASPPGPPPYGKRAPSPGAYKTATPPGYKPGSPPSFRTGTPPGYRGTSPPAGPGTFKPGSPTVGPGPLPPAGPSGLPSLPPPPAAPASGPPLSATQIKQEPAEEYETPESPVPPARSPSPPPKVVDVPSHASQSARFNKHLDRGFNSCARSDLYFVPLEGSKLAKKRADLVEKVRREAEQRAREEKEREREREREKEREREKERELERSVKLAQEGRAPVECPSLGPVPHRPPFEPGSAVATVPPYLGPDTPALRTLSEYARPHVMSPGNRNHPFYVPLGAVDPGLLGYNVPALYSSDPAAREREREARERDLRDRLKPGFEVKPSELEPLHGVPGPGLDPFPRHGGLALQPGPPGLHPFPFHPSLGPLERERLALAAGPALRPDMSYAERLAAERQHAERVAALGNDPLARLQMLNVTPHHHQHSHIHSHLHLHQQDAIHAASASVHPLIDPLASGSHLTRIPYPAGTLPNPLLPHPLHENEVLRHQLFAAPYRDLPASLSAPMSAAHQLQAMHAQSAELQRLALEQQQWLHAHHPLHSVPLPAQEDYYSHLKKESDKPL", - "output": "anchoring junction ; cytoplasm ; nuclear matrix ; nucleoplasm ; nucleus ; perinuclear region of cytoplasm ; protein domain specific binding ; transcription coactivator activity ; transcription corepressor activity ; cell killing ; cell migration ; central nervous system development ; determination of adult lifespan ; maintenance of cell polarity ; male gonad development ; multicellular organism growth ; negative regulation of transcription by RNA polymerase II ; neuron apoptotic process ; post-embryonic development ; response to food ; spermatogenesis" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MAYGVKIAKGDAYKRAAIKRRHIRIRKHISGTAERPRLVVTRSNRHIVAQVIDDVKGHTLASASTLDTTIRGGESDKSAQAKSVGALVAERAKAAGVEAVVFDRGGNQYAGRIAALADAAREAGLKF", - "output": "cytoplasm ; ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MKPSKHLIFALFALAISQPTMAAPQPIDRVAVQINDGIVLESEITNMIDTVKANARAANQSLPSDSALRTQVIERLILTRLQLQMADRIGLHIGDLQLDQAIENIAREQKMTVAQMQQKIESEGLSFGQYREQLREEITLGEIQRIQVQRRIQVSPQEITGLVKLIQEQGMKDVEYQIGHILIDVPNNPNSEQLEASSKRANAVLERLKSGEDFRRTAIASSSGPKALEGGIWDYMNINEMPTLFAEVINGAKKGDIIGPIKSGAGFHIIKIMDARGLQTKEIEEVRARHILLKPSPILSEDRAKAMLEQFLKQIRSGEAKFEDLARQYSEDPGSATKGGELGWAEPSIYVPEFAQTLNSLSPDQISEPFRTTHGWHITQLEERRKTDATDQFNTNRAHQLIFRRKFNEELQNWLDEMRADAYIEVFQPESNRG", - "output": "outer membrane-bounded periplasmic space ; peptide binding ; peptidyl-prolyl cis-trans isomerase activity ; unfolded protein binding ; Gram-negative-bacterium-type cell outer membrane assembly ; protein folding ; protein stabilization" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MKRIPRKTKGKSSGKGNDSTERADDGSSQLRDKQNNKAGPATTEPGTSNREQYKARPGIASVQRATESAEMPMKNNDEGTPDKKGNTKGDLVNEHSEAKDEADEATKKQAKDTDKSKAQVTYSDTGINNANELSRSGNVDNEGGSNQKPMSTRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASHGLHGNMTLTSSDIQRHITEFISSWQNHPIVQVSADVENKKTAQLLHADTPRLVTWDAGLCTSFKIVPIVPAQVPQDVLAYTFFTSSYAIQSPFPEAAVSRIVVHTRWASNVDFDRDSSVIMAPPTENNIHLFKQLLNTETLSVRGANPLMFRANVLHMLLEFVLDNLYLNRHTGFSQDHTPFTEGANLRSLPGPDAEKWYSIMYPTRMGTPNVSKICNFVASCVRNRVGRFDRAQMMNGAMSEWVDVFETSDALTVSIRGRWMARLARMNINPTEIEWALTECAQGYVTVTSPYAPIVNRLMPYRISNAERQISQIIRIMNIGNNATVIQPVLQDISVLLQRISPLQIDPTIISNTMSTVSESTTQTLSPASSILGKLRPSNSDFSSFRVALAGWLYNGVVTTVIDDSSYPKDGGSVTSLENLWDFFILALALPLTTDPCAPVKAFMTLANMMVGFETIPMDNQIYTQSRRASAFSTPHTWPRCFMNIQLISPIDAPILRQWAEIIHRYWPNPSQIRYGAPNVFGSANLFTPPEVLLLPIDHQPANVTTPTLDFTNELTNWRARVCELMKNLVDNQRYQPGWTQSLVSSMRGTLDKLKLIKSMTPMYLQQLAPVELAVIAPMLPFPPFQVPYVRLDRDRVPTMVGVTRQSRDTITQPALSLSTTNTTVGVPLALDARAITVALLSGKYPPDLVTNVWYADAIYPMYADTEVFSNLQRDMITCEAVQTLVTLVAQISETQYPVDRYLDWIPSLRASAATAATFAEWVNTSMKTAFDLSDMLLEPLLSGDPRMTQLAIQYQQYNGRTFNIIPEMPGSVIADCVQLTAEVFNHEYNLFGIARGDIIIGRVQSTHLWSPLAPPPDLVFDRDTPGVHIFGRDCRISFGMNGAAPMIRDETGLMVPFEGNWIFPLALWQMNTRYFNQQFDAWIKTGELRIRIEMGAYPYMLHYYDPRQYANAWNLTSAWLEEITPTSIPSVPFMVPISSDHDISSAPAVQYIISTEYNDRSLFCTNSSSPQTIAGPDKHIPVERYNILTNPDAPPTQIQLPEVVDLYNVVTRYAYETPPITAVVMGVP", - "output": "viral inner capsid ; ATP binding ; ATP hydrolysis activity ; metal ion binding ; RNA helicase activity ; 7-methylguanosine mRNA capping" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MTWDGLPTQPLLMLLMLLFAAGSGSALAGCPGCGAGMQTGCRGGCVEEEDAGSPADGCTEAGGCLRREGQPCGVYSPKCAPGLQCQPRENEEAPLRALLIGQGRCQRARGPSEETTKESKPQGGASRSRDTNHRDRQKNPRTSAAPIRPNPVQDSEMGPCRRHLDSVLQQLQTEVFRGGARGLYVPNCDLRGFYRKQQCRSSQGNRRGPCWCVDPMGQPLPVSPDGQGSTQCSARSSG", - "output": "collagen-containing extracellular matrix ; cytoplasm ; extracellular space ; Golgi apparatus ; insulin-like growth factor binary complex ; fibronectin binding ; identical protein binding ; insulin-like growth factor I binding ; insulin-like growth factor II binding ; cell migration ; positive regulation of MAPK cascade ; positive regulation of stress-activated MAPK cascade ; regulation of insulin-like growth factor receptor signaling pathway" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MNFLIFIAVASSLALGALCKKEGYPYDGNNCRYICFRNQYCDDLCKKLKGESGYCYGWNQSCYCYGLPDTEKTKPDKRCHSKG", - "output": "extracellular region ; sodium channel inhibitor activity ; toxin activity ; defense response" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MDMASLISSLLVLFLIFQNSCYCFRSPLSVFKRYEESTRSLSNDCLGTTRPVMSPGSSDYTLDIRMPGVTPTESDTYLCKSYRLPVDDEAYVVDYRPHANMDTAHHMLLFGCNVPSSTDDYWDCSAGTCNDKSSIMYAWAKNAPPTKLPEGVGFQVGGKSGSRYFVLQVHYGDVKAFQDKHKDCTGVTVRITPEKQPLIAGIYLSMSLNTVVPPGQEVVNSDIACLYNRPTIHPFAYRVHTHQLGQVVSGFRVRHGKWTLIGRQSPQLPQAFYPVEHPLEISPGDIIATRCLFTGKGRMSATYIGGTAKDEMCNLYIMYYMDAAHATSYMTCVQTGNPKLFENIPEIANVPIPVSPDMMMMMMMGHGHHHTEAEAETNTALQQPKREEEEVLNQDVHLEEDTDWPGVNLKVGQVSGLALDPKNNLVIFHRGDHVWDENSFDRNFVYQQRGIGPIQESTILVVDPNTSKVLKSTGQNLFFLPHGLTIDRDGNYWVTDVALHQVFKVGAEKETPLLVLGRAFQPGSDRKHFCQPTDVAVDPITGNFFVADGYCNSRIMQFSPNGMFIMQWGEETSSNLPRPGQFRIPHSLTMISDQGQLCVADRENGRIQCFHAKTGEFVKQIKHQEFGREVFAVSYAPGGVLYAVNGKPYYGDSTPVQGFMLNFSNGDILDTFIPARKNFEMPHDIAAGDDGTVYVGDAHANAVWKFSPSKAEHRSVKKAGIEVEEITETEIFETHMRSRPKTNESVGQQTQEKPSVVQESSAGVSFVLIITLLIIPVVVLIAIAIFIRWRKVRMYGGDIGHKSESSSGGILGKLRGKGSGGLNLGTFFATHKGYSRKGFDRLSTEGSDQEKDDDDDGSDSEEEYSAPPIPPVSSS", - "output": "transport vesicle membrane ; copper ion binding ; peptidylamidoglycolate lyase activity ; peptidylglycine monooxygenase activity ; peptide metabolic process" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MADPSEQKEKVVKEKKEKVKKEKVVKEKVAKASSSGQKKKDVKKETGLGLSVKKDENFGEWYSEVCKQDMIEYYDISGCYILRPWSMAIWEIMQIFFDAEIKKMKVKNCYFPLFVSPGVLEKEKDHIEGFAPEVAWVTKSGKSDLEVPIAIRPTSETVMYPYYSKWIRGHRDLPLKLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKAEADEEVLQILELYRRIYEEYLAVPVVKGMKSENEKFAGGLYTTSVEAFIPNTGRGVQGATSHCLGQNFAKMFEINFENEKAETEMVWQNSWAYSTRTIGVMIMTHGDDKGLVLPPKVASVQVVVIPVPYKDANTQGIYDACTATASALCEAGIRAEEDLRDNYSPGWKYSDWEMKGVPLRIEIGPRDLENDQVRTVRRDNGVKEDIPRGSLVEHVKELLEKIQQNMYEVAKQKREACVQEVKTWDEFIKALNEKKLILAPWCDEEEVERDVKARTKGETGAAKTLCSPFDQPELPEGTLCFASGKPAKKWTYWGRSY", - "output": "aminoacyl-tRNA synthetase multienzyme complex ; cytosol ; plasmodesma ; ATP binding ; proline-tRNA ligase activity ; prolyl-tRNA aminoacylation" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MFRGGTHRLRGQPGLSLPHGPRCYGSAPPELQEKTLVLVKPDAVQRRLVGNVIQRFERRGFKLVAMKLLQADQGLLDKHYQQLRQKPFYPALLAYMTSGPLVAMVWEGYNVVRSTRAMVGDTDSAVAAAGTIRGDFSMHVSRNVVHASDSVETAQREIGFWFQRNELVAWESGDRDYTWGP", - "output": "membrane ; mitochondrial intermembrane space ; mitochondrial matrix ; ATP binding ; lipid binding ; metal ion binding ; nucleoside diphosphate kinase activity ; CTP biosynthetic process ; GTP biosynthetic process ; phosphorylation ; UTP biosynthetic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MTATILMIAMTLSTILAILSFWLPQMTPDMEKLSPYECGFDPLGSMRLPFSMRFFLIAILFLLFDLEIALLLPFPWAAQLNTPSIVILWAALILTLLTLGLIYEWLQGGLEWAE", - "output": "mitochondrial membrane ; respirasome ; NADH dehydrogenase (ubiquinone) activity" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MIVIDGSIGEGGGQILRTTLALAALLGKPVRIVNIRAKRPRPGLQRQHLTSVKAVAELASARVEGLELGSTTLVFIPRGLRSGRFYFNIGTAGSITLVLQALLPVTAFAPGPVEVEIVGGTDVPWSPPIDYVRFVLRKLLAMFGFEFEIIVKRRGHYPRGGGRVVLRVTQPPHVLKPVKLEERGKVLRVEGLSHAVRLPRHVAERQARSAEAVLRSKLPGVPISIDLEWYEPSRDPHLGPGSGVVVWAVAEHSVLGSDSLGAKGKPAEAVGREAAEKLLEDLATGTALDRHASDMLIPYAALACGESILGGARLTMHAWTNIEVVKMLVPGAEMEFIEGGKLNEKFKLRVKGICYKPSS", - "output": "cytoplasm ; ATP binding ; RNA-3'-phosphate cyclase activity ; RNA processing" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MAGEFYDSARIFVQAGDGGDGAATFRREKYVPRGGPDGGDGGRGGHVYLVADPGLNTLLPFRERTRFIAERGGNGGRSRKHGRNGRDVFIRVPVGTVARTVIDGETYSVDLDAPGLRLLAARGGRGGLGNVHFATSSYQVPRIAELGEPGERREIELELKLLADVGLIGFPNAGKSTLLSVISAARPKIAPYPFTTLQPNLGVVEVGEYSFVVADIPGLIEGAHRGVGLGFSFLRHIERTRLLIHIIDAAGVDGRDPVNDFSAINEELRLYQPALAQRPQVVALNKADLPEAQANLKRLRAAIPVSEQDLFVISAATREGVDALLQRVAERLREMPAPHRAPRDETLTWPVPEVDERLYTIERTGDGWRVRGRRIERLISMTNFAQPDAIMRIQRVLEASGIGAALQEAGIQNGDVLYIEQAAFDWEDGAITYRMPGVS", - "output": "cytoplasm ; GTP binding ; GTPase activity ; magnesium ion binding ; ribosome biogenesis" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MNRSSFDLLSTVEYGGCSAKLDPAKLSELLHDIPLPVDSRIMVDVSTHDDAGVYRLNDDTALIVTTDFFPPVCSDPYTFGRIAAANALSDVYAMGGRPLLVLNLTMFPSEGIPVEVLADILRGGQQTIDESGAFTMGGHTIDDPIPKYGLAVTGIVHPEHLVTNAGVRAGQCLVLTKPLGIGVAMAAHRLGLIGSEVYEAAIGQMCLLNRAGAELMQKYGIRGATDITGFGLLGHAKGLAEASDVCLHIDSRSVPVLPECLSLLRDGCIPGAAFRNLRFVGDMLRADCPTEYKMLLADAQTSGGLLMAVDADRAEDLVADLHRTGLHPFAAIIGYATDAEDAAKLIVT", - "output": "ATP binding ; magnesium ion binding ; selenide, water dikinase activity ; phosphorylation ; selenocysteine biosynthetic process" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MTEYTPDEKLRLHQLRKLRRRWLKDQELSHREPVLPPQKMGPMEKFWNTFLENKSPWRKMVHGVYQKSIFVFTHILVPAWIIHYYMKYHVSEKPYGIVETKPRIFPGDTILETGEVIPPMKEFPDQHH", - "output": "mitochondrial respiratory chain complex I ; mitochondrial electron transport, NADH to ubiquinone ; mitochondrial respiratory chain complex I assembly" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MALPPNFMPLFRASLIGLGLGCSALALAASAQDAPEAETQAQETQGQAAARAAAADLAAGQDDEPRILEAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLPNPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRLLVVLDAKTGERLAKFEMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGPQVITTADMG", - "output": "periplasmic space ; amine dehydrogenase activity ; methylamine dehydrogenase (amicyanin) activity ; methylamine metabolic process" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MDNVDSDQTKPIPAYYCCYLLRSTVNKRAGLYVGSTPNPPRRLPQHNGLSKGGAKKTATKNRPWEMVLLVEGFMSRTAALQFEWAWQHEDSRHMSKGEPGNTKRRQRPRRSLTANLEKLHSLLQSPCFSRWPLNIRIFASDVYQLWRVWCDRANGTIPEHIRTIPDGNCPHNSPEPETDHPRVGSIDGIQTDYSKIQDYLEKAVFLLDDPNELHCKVCEAQAKPEKELVIVCPQASCFGISHLLCLSARFLKSSNDPNQLVPRSGTCPACSKLVQWPLMMQELSFRTRGGKEVQVILRKKARSDKRKAAAARPAEIDANTASNEPLESTAQAFDRLNENVHQDVLDEDWAEELDCASEDDTNERLKTGSKDQQRVEIVIEDSDEDDLEFL", - "output": "Slx1-Slx4 complex ; 5'-flap endonuclease activity ; metal ion binding ; DNA recombination ; DNA repair" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MNRCWALFLSLCCYLRLVSAEGDPIPEELYEMLSDHSIRSFDDLQRLLHGASVDEDGAELDLNLTRSHSGDELESLSRGRRSLGSPTVAEPAMIAECKTRTEVFEISRRLIDRTNANFLVWPPCVEVQRCSGCCNNRNVQCRPTQVQLRPVQVRKIEIVRKKPTFKKATVTLEDHLACKCETVVAARPVTRTPGSSQDLRAAKTPQTRVTIRTVRVRRPPKGKHRKFKHTHDKKALKETLGA", - "output": "basolateral plasma membrane ; cell surface ; cytoplasm ; extracellular space ; growth factor activity ; platelet-derived growth factor receptor binding ; protein homodimerization activity ; superoxide-generating NADPH oxidase activator activity ; activation of protein kinase activity ; activation of protein kinase B activity ; cell chemotaxis ; cellular response to mycophenolic acid ; embryonic placenta development ; heart development ; metanephric glomerular mesangial cell development ; monocyte chemotaxis ; negative regulation of DNA-templated transcription ; negative regulation of phosphatidylinositol biosynthetic process ; negative regulation of platelet activation ; paracrine signaling ; peptidyl-serine phosphorylation ; peptidyl-tyrosine phosphorylation ; platelet-derived growth factor receptor signaling pathway ; positive regulation of blood vessel endothelial cell migration ; positive regulation of calcium ion import ; positive regulation of cell division ; positive regulation of cell migration ; positive regulation of cell population proliferation ; positive regulation of chemotaxis ; positive regulation of cyclin-dependent protein serine/threonine kinase activity ; positive regulation of DNA biosynthetic process ; positive regulation of DNA-templated transcription ; positive regulation of endothelial cell proliferation ; positive regulation of ERK1 and ERK2 cascade ; positive regulation of fibroblast proliferation ; positive regulation of glomerular filtration ; positive regulation of glomerular mesangial cell proliferation ; positive regulation of hyaluronan biosynthetic process ; positive regulation of MAP kinase activity ; positive regulation of MAPK cascade ; positive regulation of metanephric mesenchymal cell migration ; positive regulation of metanephric mesenchymal cell migration by platelet-derived growth factor receptor-beta signaling pathway ; positive regulation of mitotic nuclear division ; positive regulation of phosphatidylinositol 3-kinase activity ; positive regulation of phosphatidylinositol 3-kinase signaling ; positive regulation of protein autophosphorylation ; positive regulation of protein tyrosine kinase activity ; positive regulation of reactive oxygen species metabolic process ; positive regulation of smooth muscle cell migration ; positive regulation of smooth muscle cell proliferation ; positive regulation of vascular associated smooth muscle cell proliferation ; protein phosphorylation ; reactive oxygen species metabolic process ; response to wounding" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MDIKVKDFEGPLDLLLHLVSKYEVDVYQVPIVDVIEQYLAYIETLQAMRLELAGEYMLMASQLMLIKSRRLLPKLVDKEPDEEDLEQELLGKIEEYSRFKALSQELASQHDKRALLFSKPKQELIFEQAVLQKDKTVMDLFLAFSQLMAAKQEAFKYNHTVIERDDYRIEDMMELIEARLELEQELTLTDLLKHCDHLNEAITLFLASLELIKRQLVGIEQTSHFGQIVLRKEIQ", - "output": "cytoplasm ; cell division ; chromosome segregation ; DNA replication" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MIALIQRVTRASVTVEGEVTGEIGAGLLVLLGVEKDDDEQKANRLCERVLGYRIFSDAEGKMNLNVQQAGGSVLVVSQFTLAADTERGMRPSFSKGASPDRAEALYDYFVERCRQQEMNTQTGRFAADMQVSLVNDGPVTFWLQV", - "output": "cytoplasm ; D-aminoacyl-tRNA deacylase activity ; Gly-tRNA(Ala) hydrolase activity ; Ser(Gly)-tRNA(Ala) hydrolase activity ; tRNA binding ; D-amino acid catabolic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MHKLAHTSFGIVGMFVNTCMVAKYVIINWEMFSMKKVNNDTVFGILQLETLLGDINSIFSEIESEYKMSREEILILLTLWQKGSMTLKEMDRFVEVKPYKRTRTYNNLVELEWIYKERPVDDERTVIIHFNEKLQQEKVELLNFISDAIASRATAMQNSLNAIIAV", - "output": "DNA binding ; DNA-binding transcription factor activity" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MAAKEVVFGNDARVKMLAGVNILANAVKVTLGPKGRNVVLEKSFGAPLITKDGVSVAKEIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGIDKAVAAAVVELKALSQECADSKAIAQVGTISANSDESIGDIIATAMEKVGKEGVITVEEGQALENELDVVEGMQFDRGYLSPYFINKPETGAVELDNPFVLLVDKKISNIRELLPILEGLAKTGKPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTVIAEEIGLELEKATLEDLGTAKRVVITKDNTTIIDGNGAEEQIKARVGQIKQQIEETTSDYDREKLQERMAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALVRVASKIANVDVANEDQKHGVVIALRAMEAPLRQIATNAGEEASVVANTVKNGSGNFGYNAGNDSYGDMLEMGILDPTKVTRSALQFAASVAGLMITTEAMVAELPKADAPDMGGMGGGMGGMGMM", - "output": "cytoplasm ; ATP binding ; ATP-dependent protein folding chaperone ; isomerase activity ; unfolded protein binding ; protein refolding" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MKNNNFRLSAAGKLAAALAIILAASAGAYAAEIVAANGANGPGVSTAATGAQVVDIVAPNGNGLSHNQYQDFNVNQPGAVLNNSREAGLSQLAGQLGANPNLGGREASVILNEVIGRNPSLLHGQQEIFGMAADYVLANPNGISCQSCGFINTSHSSLVVGNPLVENGVLQGYSTFGNRNTLSLNGTLNAGGVLDLIAPKIDSRGEVIVQDFKQSNGKVTSAAINAISGLNRVARDGTVQASQQMPTALDSYYLGSMQAGRINIINTAQGSGVKLAGSLNAGDELKVKAYDIRSESRVDDASSNKNGGDNYQNYRGGIYVNDRSSSQTLTRTELKGKNISLVADNHAHLTATDIRGEDITLQGGKLTLDGQQLKQTQGHTDDRWFYSWQYDVTREREQLQQAGSTVAASGSAKLISTQEDVKLLGANVSADRALSVKAARDVHLAGLVEKDKSSERGYQRNHTSSLRTGRWSNSDESESLKASELRSEGELTLKAGRNVSTQGAKVHAQRDLTIDADNQIQVGVQKTANAKAVRDDKTSWGGIGGGDNKNNSNRREISHASELTSGGTLRLNGQQGVTITGSKARGQKGGEVTATHGGLRIDNALSTTVDKIDARTGTAFNITSSSHKADNSYQSSTASELKSDTNLTLVSHKDADVIGSQVASGGELSVESKTGNINVKAAERQQNIDEQKTALTVNGYAKEAGDKQYRAGLRIEHTRDSEKTTRTENSASSLSGGSVKLKAEKDVTFSGSKLVADKGDASVSGNKVSFLAADDKTASNTEQTKIGGGFYYTGGIDKLGSGVEAGYENNKTQAQSSKAITSGSDVKGNLTINARDKLTQQGAQHSVGGAYQENAAGVDHLAAADTASTTTTKTDVGVNIGANVDYSAVTRPVERAVGKAAKLDATGVINDIGGIGAPNVGLDIGAQGGSSEKRSSSSQAVVSSVQAGSIDINAKGEVRDQGTQYQASKGAVNLTADSHRSEAAANRQDEQSRDTRGSAGVRVYTTTGSDLTVDAKGEGGTQRSNSSASQAVTGSIDAANGINVNVKKDAIYQGTALNGGRGKTAVNAGGDIRLDQASDKQSESRSGFNVKASAKGGFTADSKNFGAGFGGGTHNGESSSSTAQVGNISGQQGVELKAGRDLTLQGTDVKSQGDVSLSAGNKVALQAAESTQTRKESKLSGNIDLGAGSSDSKEKTGGNLSAGGAFDIAKVNESATERQGATIASDGKVTLSANGKGDDALHLQGAKVSGGSAALEAKNGGILLESAKNEQHKDNWSLGIKANAKGGQTFNKDAGGKVDPNTGKDTHTLGAGLKVGVEQQDKTTHANTGITAGDVTLNSGKDTRLAGARVDADSVQGKVGGDLHVESRKDVENGVKVDVDAGLSHSNDPGSSITSKLSKVGTPRYAGKVKEKLEAGVNKVADATTDKYNSVARRLDPQQDTTGAVSFSKAEGKVTLPATPAGEKPQGPLWDRGARTVGGAVKDSITGPAGRQGHLKVNADVVNNNAVGEQSAIAGKNGVALQVGGQTQLTGGEIRSQQGKVELGGSQVSQQDVNGQRYQGGGRVDAAATVGGLLGGAAKQSVAGNVPFASGHASTQQADAKAGVFSGK", - "output": "cell outer membrane ; catalytic activity ; toxin activity ; killing of cells of another organism ; macromolecule metabolic process ; nitrogen compound metabolic process ; primary metabolic process" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MEEEGKKGKKPGIVSPFKRVFLKGEKSRDKKAHEKVTERRPLHTVVLSLPERVEPDRLLSDYIEKEVKYLGQLTSIPGYLNPSSRTEILHFIDNAKRAHQLPGHLTQEHDAVLSLSAYNVKLAWRDGEDIILRVPIHDIAAVSYVRDDAAHLVVLKTAQDPGISPSQSLCAESSRGLSAGSLSESAVGPVEACCLVILAAESKVAAEELCCLLGQVFQVVYTESTIDFLDRAIFDGASTPTHHLSLHSDDSSTKVDIKETYEVEASTFCFPESVDVGGASPHSKTISESELSASATELLQDYMLTLRTKLSSQEIQQFAALLHEYRNGASIHEFCINLRQLYGDSRKFLLLGLRPFIPEKDSQHFENFLETIGVKDGRGIITDSFGRHRRALSTTSSSTTNGNRATGSSDDRSAPSEGDEWDRMISDISSDIEALGCSMDQDSA", - "output": "cytoplasm ; mitochondrion ; protein-containing complex ; blood vessel endothelial cell differentiation ; cell-cell junction organization ; endothelial cell development ; endothelial tube morphogenesis ; endothelium development ; heart development ; in utero embryonic development ; inner ear development ; integrin-mediated signaling pathway ; multicellular organism growth ; pericardium development ; regulation of angiogenesis ; stress-activated MAPK cascade ; vasculogenesis ; venous blood vessel morphogenesis" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MSLTTVILAAGKGTRMRSALPKVLHKVAGKTMVQHVIDNAKALGATTTNLVYGHGGELLQQQLANNNVNWVLQAEQLGTGHAVAQANSHVNDDDTVLILYGDVPLTKQSTLERLLAATPKHGLAVLTVNLANPNGYGRMLRVDGKLVGIVEQKDASPEQLLISEVNTGIMAVNGRLLKSWLGNLSNNNAQGEYYLTDIVAMAHSEGVEITSAQPDHPMEVEGANNRIQLAGLERAYQAWQAQELMLNGATLADPARIDVRGTVTTGEDVLIDINVIFEGKVTIGHNVEIGPNCVLKNCSIGDNVIIKANTLIEDATVAAKCTLGPYARLRPGAIMEEDSHVGNFVEMKKTRLGKGSKANHLSYLGDAEIGEKVNIGAGTITCNYDGVNKAKTIIGNNAFIGSNSSLVAPVNIGAMATIGAGSVITNTVADEQLAIARGKQRNLDGWKRPVKK", - "output": "cytoplasm ; glucosamine-1-phosphate N-acetyltransferase activity ; magnesium ion binding ; UDP-N-acetylglucosamine diphosphorylase activity ; cell morphogenesis ; cell wall organization ; lipid A biosynthetic process ; peptidoglycan biosynthetic process ; regulation of cell shape ; UDP-N-acetylglucosamine biosynthetic process" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MAKFASIITLIFAALVLFAAFDAPAMVEAQKLCEKPSGTWSGVCGNSNACKNQCINLEGAKHGSCNYVFPAHKCICYVPC", - "output": "extracellular region ; defense response ; defense response to fungus ; jasmonic acid and ethylene-dependent systemic resistance ; killing of cells of another organism ; response to ethylene ; response to insect ; response to jasmonic acid" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MYQRVLVKLSGEVMCGEGSRGFDQSNINYLVQQIAQIVDYGVNVGIVIGAGNIFRGEELSEIPHSLADQIGMLGTVINALYLKGSLQKVGIKCVVVSQVTSLPSIRPIHYDDINLYFDAGYVVIFAGGTSNPFFTTDTAAALRAVEMGANLLIKATKVDGIYDSDPKKNKSARKLDKISYYDAISRGLKVMDMEAFSICGRYKLPIVILNFFEDGSLLRAVRGEDVGSIIMPD", - "output": "cytoplasm ; ATP binding ; UMP kinase activity ; 'de novo' CTP biosynthetic process ; phosphorylation" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MPTFSREEIVHLGDLARIALTDEEITRLQGELNVIADSINKVQEVASDDVPPTANPVPLEAYLRPDVAETPLTQEEALAGGPKTEAGMFVAPRILGSEE", - "output": "asparaginyl-tRNA synthase (glutamine-hydrolyzing) activity ; ATP binding ; glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity ; regulation of translational fidelity ; translation" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MPTVGSLVYIMVELAIALLAILGNMLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITISTGFCAACHGCLFIACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGVIAVCWVLSFAIGLTPMLGWNNCHHWGEGENQSQGCGEGQVACLFEDVVPMNYMVYYNFFACVLVPLLLMLGVYLRIFLAARRQLKQMETQPLPGERARSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPECPHAPLWLMYPAIILSHFNSVVNPFIYAYRIREFRHTFHKIIRSHILRRQEPFKAGGTSARALAAHGSDAEQVSLRLNGHPSGVCPNGSAPHPERRPNGYALGLVSRASARESPGDTGLPDVELLSHELHGASPESPGLEGPLAQDGAGVS", - "output": "plasma membrane ; postsynapse ; enzyme binding ; G protein-coupled adenosine receptor activity ; identical protein binding ; lipid binding ; adenylate cyclase-activating G protein-coupled receptor signaling pathway ; apoptotic signaling pathway ; eating behavior ; G protein-coupled adenosine receptor signaling pathway ; inhibitory postsynaptic potential ; locomotory behavior ; negative regulation of alpha-beta T cell activation ; negative regulation of inflammatory response ; positive regulation of apoptotic signaling pathway ; positive regulation of synaptic transmission, GABAergic ; response to amphetamine ; response to inorganic substance ; response to purine-containing compound ; synaptic transmission, dopaminergic" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MSDKFHILLLNGPNLNLLGTREPEKYGYTTLAEIVSQLEIQAQGMDVALSHLQSNAEHALIDSIHQARGNTDFILINPAAFTHTSVALRDALLGVQIPFIEIHLSNVHAREPFRHHSYLSDIAVGVICGLGADGYNFALQAAVNRLSKSN", - "output": "3-dehydroquinate dehydratase activity ; amino acid biosynthetic process ; aromatic amino acid family biosynthetic process ; chorismate biosynthetic process ; quinate catabolic process" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MTIGLVGRKVGMTRVFTEDGVSTPVTVIEVEANRVAQVKTVDNDGYSALQVTTGKRKASRVTKPAAGHFAKAGIEAGRGLWEFRLNENEGSDIEAGSEITVEVFNDTKLVDVTGTSKGKGFQGGIKRWNFTMQHATHGVSLSHRSNGSLGQCQTPGRVFKGKKMSGHMGAVRCTTQNLELVRVDAERNLLLIKGAVPGAINGNVIIKPAVKA", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MSTQPIKVLIVDDSALIRSLLTDIINSQTDMEVVGVAPDPLVAREKIKALNPDVLTLDVEMPRMDGLVFLEKLMRLRPMPVLMVSSLTEKSSFLTLRALELGAVDFVTKPKIDISRGMQEYAREITDKLRVAAKARVRQPPHVHLSVERKNTADAVLPMEHRTFSSTEKIIVIGASTGGTEALKSFLVAMPADSPGILITQHMPEAFTRTFAQRLNSLCRISVKEAEHGERILPGHAYVAPGNRHLLLARSGANYVVELSDGPPVSRHRPSVDVLFRSAANRAGRNAVGIIMTGMGDDGAAGMLEMREAGAYTFAQDEKSCVVFGMPKEAIARGGVDEVAPLGEMPRRLFGWLESQGNRAFRV", - "output": "cytoplasm ; phosphorelay response regulator activity ; protein-glutamate methylesterase activity ; protein-glutamine glutaminase activity ; chemotaxis ; protein deamination ; protein demethylation" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MVYSVGLTGNIASGKSTVAEFFSELGINVIYADKIAKELTSKNTPCYQDIISHFGSSVVLNNGELDRKRIRDIIFSNSNERLWLESLLHPVIRKKIEEQLIVCTSPYCLIEIPLLFNKHHYPYLQKVLLVIAPLESQLDRIVKRDHCTKKQALAILATQPNLEQRLEAADDVLINESGLSELKAKVNKLHQKYLREAKIKQ", - "output": "cytoplasm ; ATP binding ; dephospho-CoA kinase activity ; coenzyme A biosynthetic process ; phosphorylation" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MSKNVVIIGTQWGDEGKGKVVDLITDKVASVVRFQGGHNAGHTLVINGKTTILHLIPSGILRNHVECLIGHGVVLSMSALLKEIAELEVADIDTTKRLKISPGCPLILPYHIELDNAREIKRGKAAIGTTGNGIGPAYEDKVARRGLRVSDLLDPNLFASKLKEVMEYHNFFLTHYYNANPVDYQTTLDEVLSQVEQTKHMIVDVTEQIHQHIANDENILFEGAQGALLDIDQGTYPFVTSSNTTSGAAVTGSGIGVTDIDYVLGIVKAYTTRVGGGPFPTELIYDVALDKGDEIGKVLGTVGHEFGATTGRQRRCGWLDMVTLKRSFNLNAVTGICLTKLDVMDTLETIKICTSYEIDGVETTIPPFSAEDYAKAKPIYIKIPGWKTSTIGTDSFDSLPVEAQSYIRKIEQLANLPVDILSTGPDRLQTLILKHPFE", - "output": "cytoplasm ; adenylosuccinate synthase activity ; GTP binding ; magnesium ion binding ; 'de novo' AMP biosynthetic process" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MRVGCCLLLKPLRQRLCTASISSRHIMRWCATSSSNINSTETAAKMPDDDVSGSLSAPSLLKYKIEPSTATMGAPRPPHDDDRAFCTLASFPPSHIRNVAVVAHVDHGKTTLSDAILRRTGVLSGSQVGTYTDRLLVERERGITIKAQTCSIFVVWDGEEFLLNLIDTPGHVDFQYEVSRSLSASDAALLLVDAAQGIEAQTMAHFHMALDRGLTILPVLTKMDAVLSDAPVDRALQDLEDSTGLLRREVLFTSAKEQLGIEALLHAIIERVPPPTGLLGLSDLQQLPPLLPGSAERVAMEEKMVPLRALLFDSWTSECGGGLRRPAPRGGEKVNSGNDNDRNLICLVRIIDGTLTAKTVVTFYQSQRRCEALEVGIIHPELRPTAALTAGMVGYVVFSQVRGEEFLVGETLYTLPTRKFARENIVPVPGFRRVQPVVFAGFYPDEGEYITQLREAVEKLRVNEPAVTMEPLDCPALGSGLQLGFLGMLHMQVFQERLLAEFGQRVLVTPPLVQYKYREAGSDEEEPLKPLTVHTWKWIHEGAACYLEPYVTATIITRREHFQAIDGEALRRFRGEQLDMRVLDDARVLVRYKMPLADLARGFFAVVKSLSHGYASLDYGDPVYEEADLVKVDVLVQKSRISALSVICLRSEAPSIGKRIVSSLKSNLTRTAVDIPLQAMVGSKIVARETVKAYRKDVTAKIHAGDISRKQKKWNDQKKGKERMARRTVGAVTLDQSILAAAMGAISL", - "output": "mitochondrial inner membrane ; mitochondrial matrix ; GTP binding ; GTPase activity ; ribosome binding ; positive regulation of translation ; translation" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MSRILLRGIQCHACRQNVIRSFVSASGVTITPPAIGSVSPSKAHPPHLSGSFPTRHVKLFSSQAKDDPSLAADAVSENSAAQEGSYPQENSEQHVPWYLQEEVQEMALHPMRQQQELPPLPENPPPILKVLLEYISFDIGLDNLNLLDLRTLDPPPALGANLIMIFGTARSVKHLNVSADKFCRWLRTTYKLRPDADGLLGRNELKIKLRRKARRARLVKRAGSTLKQPDDGITTGWICVDVGIVEGGQLSKPEGVQKAGFVGFGTVIQGTRIVVQMMTEEKREEIDLESLWRQTLEKNSMDNPGLPKPQAEEPPQVVGFTHESSTVTAADFSHRVSQTPPIRANYEQLRSISTSLHRLRDKRGSATDFVPTDTTVATKSAKSISSQESLPSLFNYLSNLEPDKAIDELGQGMDDRTSTSFLQRFYEELARTAPQIASAQKLELMCTGILLQHSGYRKEDLFQAFKEHIVSNYPLPRALVLRLLDALLAFKPDPNSNPPRLRLPGADMELALRLIENAALRGTNILHADFLIRVFLAVSYRTRVYAVKPENLHSAAITGNRIPVSIDEFESVQRIQTRLASIIRAAKVALGEKEYLDILRVHSDQGEYAKFWNAWGEVALAGIHRGKSFYLFLFNLHAELGDWQQSRTTLLNCIPMMWREDPPVFFDAELAEVVSKCIALAYPDIDDTVQHNLPALIVKTWHHCRTAIQNQKMNERKERLIQTELGTLPEN", - "output": "mitochondrial inner membrane ; mitochondrial gene expression" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MAFHWCDNNLHTTVFTPRDFQVELLATAYERNTIICLGHRSSKEFIALKLLQELSRRARRHGRVSVYLSCEVGTSTEPCSIYTMLTHLTDLRVWQEQPDMQIPFDHCWTDYHVSILRPEGFLYLLETRELLLSSVELIVLEDCHDSAVYQRIRPLFENHIMPAPPADRPRILGLAGPLHSAGCELQQLSAMLATLEQSVLCQIETASDIVTVLRYCSRPHEYIVQCAPFEMDELSLVLADVLNTHKSFLLDHRYDPYEIYGTDQFMDELKDIPDPKVDPLNVINSLLVVLHEMGPWCTQRAAHHFYQCNEKLKVKTPHERHYLLYCLVSTALIQLYSLCEHAFHRHLGSGSDSRQTIERYSSPKVRRLLQTLRCFKPEEVHTQADGLRRMRHQVDQADFNRLSHTLESKCRMVDQMDQPPTETRALVATLEQILHTTEDRQTNRSAARVTPTPTPAHAKPKPSSGANTAQPRTRRRVYTRRHHRDHNDGSDTLCALIYCNQNHTARVLFELLAEISRRDPDLKFLRCQYTTDRVADPTTEPKEAELEHRRQEEVLKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPAYHVILVAPSYKSPTVGSVQLTDRSHRYICATGDTTEADSDSDDSAMPNSSGSDPYTFGTARGTVKILNPEVFSKQPPTACDIKLQEIQDELPAAAQLDTSNSSDEAVSMSNTSPSESSTEQKSRRFQCELSSLTEPEDTSDTTAEIDTAHSLASTTKDLVHQMAQYREIEQMLLSKCANTEPPEQEQSEAERFSACLAAYRPKPHLLTGASVDLGSAIALVNKYCARLPSDTFTKLTALWRCTRNERAGVTLFQYTLRLPINSPLKHDIVGLPMPTQTLARRLAALQACVELHRIGELDDQLQPIGKEGFRALEPDWECFELEPEDEQIVQLSDEPRPGTTKRRQYYYKRIASEFCDCRPVAGAPCYLYFIQLTLQCPIPEEQNTRGRKIYPPEDAQQGFGILTTKRIPKLSAFSIFTRSGEVKVSLELAKERVILTSEQIVCINGFLNYTFTNVLRLQKFLMLFDPDSTENCVFIVPTVKAPAGGKHIDWQFLELIQANGNTMPRAVPDEERQAQPFDPQRFQDAVVMPWYRNQDQPQYFYVAEICPHLSPLSCFPGDNYRTFKHYYLVKYGLTIQNTSQPLLDVDHTSARLNFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQILVPELCTVHPFPASLWRTAVCLPCILYRINGLLLADDIRKQVSADLGLGRQQIEDEDFEWPMLDFGWSLSEVLKKSRESKQKESLKDDTINGKDLADVEKKPTSEETQLDKDSKDDKVEKSAIELIIEGEEKLQEADDFIEIGTWSNDMADDIASFNQEDDDEDDAFHLPVLPANVKFCDQQTRYGSPTFWDVSNGESGFKGPKSSQNKQGGKGKAKGPAKPTFNYYDSDNSLGSSYDDDDNAGPLNYMHHNYSSDDDDVADDIDAGRIAFTSKNEAETIETAQEVEKRQKQLSIIQATNANERQYQQTKNLLIGFNFKHEDQKEPATIRYEESIAKLKTEIESGGMLVPHDQQLVLKRSDAAEAQVAKVSMMELLKQLLPYVNEDVLAKKLGDRRELLLSDLVELNADWVARHEQETYNVMGCGDSFDNYNDHHRLNLDEKQLKLQYERIEIEPPTSTKAITSAILPAGFSFDRQPDLVGHPGPSPSIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVANLNLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYVPKELEKALIEAKIPTHHWKLADLLDIKNLSSVQICEMVREKADALGLEQNGGAQNGQLDDSNDSCNDFSCFIPYNLVSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVLPITRQLDGGNQEQRIPGSTKPNAENVVTVYGAWPTPRSPLLHFAPNATEELDQLLSGFEEFEESLGYKFRDRSYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLAVRHGFHKFFRHLSPGLNDVIDRFVRIQQENGHCISEEYYLLSEEECDDAEDVEVPKALGDVFESIAGAIFLDSNMSLDVVWHVYSNMMSPEIEQFSNSVPKSPIRELLELEPETAKFGKPEKLADGRRVRVTVDVFCKGTFRGIGRNYRIAKCTAAKCALRQLKKQGLIAKKD", - "output": "cytoplasm ; RISC complex ; RISC-loading complex ; ATP binding ; bidentate ribonuclease III activity ; deoxyribonuclease I activity ; helicase activity ; metal ion binding ; pre-miRNA binding ; ribonuclease III activity ; RNA binding ; single-stranded RNA binding ; apoptotic DNA fragmentation ; dendrite morphogenesis ; dsRNA transport ; germ-line stem cell division ; germarium-derived female germ-line cyst formation ; germarium-derived oocyte fate determination ; miRNA processing ; mitotic cell cycle, embryonic ; pole cell formation ; pre-miRNA processing ; response to starvation ; RISC complex assembly ; RNA phosphodiester bond hydrolysis ; RNA-mediated post-transcriptional gene silencing ; segment polarity determination ; siRNA processing" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MYADRDLPGAGGLAVRVIPCLDVDDGRVVKGVNFENLRDAGDPVELAAVYDAEGADELTFLDVTASSSGRATMLEVVRRTAEQVFIPLTVGGGVRTVADVDSLLRAGADKVAVNTAAIACPDLLADMARQFGSQCIVLSVDARTVPVGSAPTPSGWEVTTHGGRRGTGMDAVQWAARGADLGVGEILLNSMDADGTKAGFDLALLRAVRAAVTVPVIASGGAGAVEHFAPAVAAGADAVLAASVFHFRELTIGQVKAALAAEGITVR", - "output": "cytoplasm ; imidazoleglycerol-phosphate synthase activity ; lyase activity ; histidine biosynthetic process" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MINLKKYIPEGSRDILFEECTIKNNIENILRNSYINVGYEEVRSPTLEFYDVYNLENQPISQEKMYKLFDNTGRILVLRPDMTTPIARICATKLKNRVYPLKLSYTGNIYRMNKALNGKISEITQSGIEILGFSSLKADAEVIITAIKAILKTGLKNFKIEIGQVEFFKSIISDTALKEQDTEKLRNFIENKNFSKVEEFILRNSDLIGETSSKVLMNLPNLFGGKEVIEKAEQLTSNKQAIEALKKVRDLYDIVKRAGFGEYILIDLGMVQHINYYTGLIFRGYAHGIGDDLLSGGRYDKLLGQFGYDIPATGLAINVDNLVAALDDCVRENLYSRDRYVVFASSCNIEKAYEAVSKLNSEGKRAEVSLFDNIEETKKYCIENKISKIFNADTGKTIVEENYYGQK", - "output": "cytoplasm ; transferase activity ; histidine biosynthetic process" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MSTLRLLLSDSYDPWFNLAVEECIFRQMPATQRVLFLWRNADTVVIGRAQNPWKECNTRRMEEDHVRLARRSSGGGAVFHDLGNTCFTFMAGKPEYDKTVSTAIVLAALNSLGVTAEASGRNDLVVKTDSGDRKVSGSAYRETMDRGFHHGTLLLNADLSRLANYLNPDQKKLQAKGITSVRGRVANLVELLPGITHQQVCEAIQEAFFSHYGERVDAEVISPDNTPDLPNFAETFARQSSWEWNFGQAPAFSHLLDERFRWGGVELHFDVEKGHITRAQAFTDSLNPAPLEALAARLVGCQYRAEVLQQQCEALVGDFPEQEAELKELSAWIAGAVR", - "output": "cytoplasm ; ATP binding ; lipoate-protein ligase activity ; protein lipoylation" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MNHIQDAFLNTLKVERNFSEHTLKSYQDDLIQFNQFLEQEHLELNTFEYRDARNYLSYLYSNHLKRTSVSRKISTLRTFYEYWMTLDENIINPFVQLVHPKKEKYLPQFFYEEEMEALFKTVEEDTSKNLRDRVILELLYATGIRVSELVNIKKQDIDFYANGVTVLGKGSKERFVPFGAYCRQSIENYLEHFKPIQSCNHDFLIVNMKGEAITERGVRYVLNDIVKRTAGVSEIHPHKLRHTFATHLLNQGADLRTVQSLLGHVNLSTTGKYTHVSNQQLRKVYLNAHPRAKKENET", - "output": "cytoplasm ; DNA binding ; tyrosine-based site-specific recombinase activity ; cell division ; chromosome segregation ; transposition, DNA-mediated" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MEKITASVRLKKTRGERNRLLKEGKVPGVMYGKNIEPVAVAVNARELESLVERGLKLFELSVEGKTQRVLVKELQHHPVTGKLIHVDFQVVESGRKIRQLVPVELYGEPAGVKAGGILEHGLSEVTVECLPEDLPEFIEADVSKLEVGDCLRVKDLELPPGVRVIEDPESIIALISAPRDYVEEEEETTTSAPEATA", - "output": "ribonucleoprotein complex ; ribosome ; 5S rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MSKVRKNEEALSEVLVDVNRVTKVVKGGRRFAFSAYVVVGDKAGRVGAGHGKAKEVNEAREKAKQAAKKKMMKVSLYQNRTIHHDVIGRSGAAKVVLRRAKAGTGVIAGGSMRAIFDSLGVHDIVAKSIGSTNVYTMIAATFDALKKLSSPKSIAARRDKKMNEIFIKSSDIQVNE", - "output": "small ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MAGLSRILLSCTLACLLAGQAAQASVDDPTRAGGDNRVRALRADQARRDVLLTACRDDPGHRRGEPDCVNAERAQALQQWQAAAMTSVDAAFSDLAGALRNAAPRRMEAAIVRLTRQLQPLVYSMMTLLVLLTGYALLARRDRPFEWHIRHALLVAVVTSLALSPDRYLSTVVAGVQDVAGWLSGPWTAPDGAAGRGGLAQLDQFAAQAQAWVAQLAGQAANDANPGSAVNWLLCAMIVAASAGGWLCLAASLLIVPGLIVTLLLSLGPLFLVLLLFPALQRWTNAWLGALVRALVFMALGTPAVGLLSDVLAGALPAGLPQRFATDPLRSTMLAATLCATATLMLLTLVPLASSVNAGLRRRLWPNAAHPGLAQAHRQAAARQYAPRPAAAAAAAGPHQAGTYAASATPAPAPARPAPSFPAHAYRQYALGGARRPPPRVRRDDRPAPAPDRRVLPRKPNLP", - "output": "plasma membrane ; protein secretion by the type IV secretion system" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MKRSLRRVLRPEERKEVQGVVYRGVGKDMDCSKESFKVDIEGDMCRLEAFIKNRRKLSKYEDENLCLLHHAAAEGQVELMQLIINGSSCEALNVMDDYGNTPLHWAAEKNQVESVKFLLSQGANPNLRNRNMMAPLHIAVQGMYNEVIKVLTEHKATNINLEGENGNTALMSTCAKDNSEALQILLEKGAKLCKSNKWGDYPVHQAAFSGAKRCMELILAYGEKTGYSREAHINFVNHKKASPLHLAVQSGDLDMIKMCLDSGAHIDMMENAKCMALHFAATQGATDIVKLMISSYTGSSDIVNAVDGNQETLLHRASLFDHHDLADYLISVGADINSTDSEGRSPLILATASASWNIVNLLLSKGAKVDIKDHLGRNFLHLTVQQPYGLRNLRPEFLQMQHIKELVMDEDNDGCTPLHYACRQGAPVSVNNLLRFNVSVHSKSKDKKSPLHFAASYGRINTCQRLLQDISDTRLLNEGDLHGMTPLHLAAKNGHDKVVQLLLKKGALFLSDHNGWTALHHASMGGYTQTMKVILDTNLKCTDRLDEEGNTALHFAAREGHAKAVAMLLSYNADILLNKKQASFLHIALHNKRKEVVLTTIRSKRWDECLQVFTHDSPSNRCPIMEMVEYLPECMKVLLDFCMIPSTEDKSCQDYHIEYNFKYLQCPLSMTKKVTPTQDVIYEPLTILNVMVQHNRIELLNHPVCREYLLMKWCAYGFRAHMMNLGSYCLGLIPMTLLVVKIQPGMAFNSTGIINETISTHEERINTLNSFPLKICMILVFLSSIFGYCKEVVQIFQQKRNYFLDYNNALEWVIYTTSMIFVLPLFLDIPAYMQWQCGAIAIFFYWMNFLLYLQRFENCGIFIVMLEVIFKTLLRSTGVFIFLLLAFGLSFYVLLNFQDAFSTPLLSLIQTFSMMLGDINYRDAFLEPLFRNELAYPVLTFGQLIAFTMFVPIVLMNLLIGLAVGDIAEVQKHASLKRIAMQVELHTNLEKKLPFWYLRKVDQRSTIVYPNRPRHGRMLRFFHYFLSMQETRQEAPNIDTCLEMEILKQKYRLKDLTSLLEKQHELIKLIIQKMEIISETEDEDNHCSFQDRFKKERLEQMHSKWNFVLNAVKTKTHCSISHPDI", - "output": "apical plasma membrane ; axon ; plasma membrane ; stereocilium bundle ; calcium channel activity ; calcium-release channel activity ; channel activity ; identical protein binding ; monoatomic ion channel activity ; osmolarity-sensing monoatomic cation channel activity ; temperature-gated cation channel activity ; voltage-gated calcium channel activity ; calcium ion transmembrane import into cytosol ; calcium ion transmembrane transport ; calcium ion transport ; cell surface receptor signaling pathway ; cellular response to caffeine ; cellular response to carbon dioxide ; cellular response to cold ; cellular response to heat ; cellular response to hydrogen peroxide ; cellular response to organic substance ; detection of chemical stimulus involved in sensory perception of pain ; detection of mechanical stimulus involved in sensory perception ; detection of mechanical stimulus involved in sensory perception of pain ; intracellular calcium ion homeostasis ; monoatomic ion transmembrane transport ; positive regulation of insulin secretion involved in cellular response to glucose stimulus ; positive regulation of monoatomic anion transport ; positive regulation of sensory perception of pain ; protein homotetramerization ; regulation of blood circulation ; regulation of neuronal action potential ; response to cold ; response to hydrogen peroxide ; response to organic cyclic compound ; response to organic substance ; response to pain ; response to xenobiotic stimulus ; sensory perception of pain ; thermoception ; transmembrane transport ; urinary bladder smooth muscle contraction" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MSLTIAIVGRPNVGKSTLFNRLVGQKLALVDDKPGVTRDRRIHAAKLQDLRFDVIDTAGLEEAGDHTLEGRMRSQTKAAIDEADLILFVFDAKSGITPSDLNFASLVRKSGKPIVLVANKSESKAATGGEYEAWSLGLGEPCPISAEHGLGLSDLRDAIIDAVGSERAFSNNKEEDMTIQPASVGDDIEDLQEEGLIYDESKPIRIAIAGRPNTGKSTLINSMLKQDRLLTGPEAGLTRDSISVDWEWRGRHIKLFDTAGLRRKSKIQEKLEKLSVADTLRAIRFAEVVVIVFDATMPFEKQDLQIADLVIREGRVPVIAFNKWDLIENSQATLIDLHEKCARFLPQVRGLRAVPLSGQYGQGIDKLMENIMMMHRVWNRRISTAKLNQWLEIVVAHHPPPAISGRRLKVKYITQVKTRPPGFMISCSRPKVMPQSYLRYLVNGLRETFDMSGIPVRLSLRASDNPFATRAKKK", - "output": "GTP binding ; ribosome biogenesis" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MNSLVATPVPPHFYEYSRLSSPHPMSTPTHTPINRKRKADDDGNDHDGRMSASPTNSPAFTPRSLPAPRSFKRSRPNVSGRPLSLPRLLETLDTDALRGILRSMCERHPALADEVIHTSPRPSVSSALQVLRNYQSTLQNSFPLGGNPESDYAYNRVRQPLGNLLDALSDFTPHFLPPHETQASVSLSYLDGATDIIHALPRWHSPQNNIERDSAYDEICKAWILVIREAAKRGGGIQLQYGGWDQKLAKHNQNAGGRLQAAVNELGNSLGWMHGPDSQGYGSSTGGDLVSVREQLLSGTYGLGTPVKVGPW", - "output": "cytoplasm ; nucleus ; proteasome binding ; nuclear protein quality control by the ubiquitin-proteasome system ; proteasome localization ; protein transport" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MIQIFFLGTGAGSPSKKRKLPAFLVRREGVNILLDCGEGTQYTLMNYKLGINSIKIIGISHMHGDHVFGLLGVIASMGLLDRKETLYILGPRKLKDFLYTSFEYSKFNPSFKIEFIDNYNDENITISTFKTCHTIESQGYLIMEKDRVKIDEEKLEKEKIRDWRVIRKLKEGKTVEYNGKLLKPEDYLVIKRGSKVAYTGDTMPCQSVVDSVKGVDILIHDSTFLDEPSAYTYGHSNVTDAAKIALEASVKLLALTHISPRYEDVSEHLKMARRIFPKSILPDDLSYITIK", - "output": "3'-tRNA processing endoribonuclease activity ; zinc ion binding ; tRNA 3'-trailer cleavage" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MEESILRMHDKTTLKNMAFNRGLSRRGHNGRNASRMRKQDFIDFIMVQNHRDQSAVLGSDFLGDDMIRIFQEFIMDETFTFNPFIHLMGTIKNSTSKSPVSNQPSPEEDEPIPDLTLKPLEPCTKCECTTCMKNSIKQEENLKVHQNILNLESKIMCVVCQANVRNVVFVPCNHLATCISCSANPLMPKKCPMCRKGCKTTIKIFF", - "output": "metal ion binding ; suppression by virus of host apoptotic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "SCMKAAPMKEVSIRGQGSLAYPGLWTQGNLETLSGPNDATRGLTSLADTFEHVIEELLDEQQVVQPSKENKDADLYSSRVMLSSQVPLEPPLLFLLEEYKNYLDAANMSMRVRRHSDPARRGELSVCDSISEWVTAAEKKTAVDMSGATVTVLEKVPVPKGQLKQYFYETKCSSKGYAKEGCRGIDKRYWNSQCRTTQSYVRALTMDNKKRVGWRFIRIDTSC", - "output": "extracellular region ; growth factor activity" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MGTLLALVVGAALVSSAWGGCVEVDSETEAVYGMTFKILCISCKRRSETTAETFTEWTFRQKGTEEFVKILRYENEVLQLEEDERFEGRVVWNGSRGTKDLQDLSIFITNVTYNHSGDYECHVYRLLFFENYEHNTSVVKKIHIEVVDKANRDMASIVSEIMMYVLIVVLTIWLVAEMVYCYKKIAAATEAAAQENASEYLAITSESKENCTGVQVAE", - "output": "axon ; perikaryon ; plasma membrane ; voltage-gated sodium channel complex ; sodium channel activity ; sodium channel inhibitor activity ; sodium channel regulator activity ; voltage-gated monoatomic ion channel activity ; cardiac muscle cell action potential involved in contraction ; regulation of heart rate by cardiac conduction ; regulation of monoatomic ion transmembrane transport" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MQKDALNNVRITDEQVLMTPEQLKAAFPLSLAQEAQIAQSRGIISDIIAGRDPRLLVVCGPCSIHDPETALEYARRFKALAAEVSDSLYLVMRVYFEKPRTTVGWKGLINDPHMDGSFDVEAGLKIARQLLVELVNMGLPLATEALDPNSPQYLGDLFSWSAIGARTTESQTHREMASGLSMPVGFKNGTDGSLATAINAMRAAAQPHRFVGINQAGQVALLQTQGNPHGHVILRGGKAPNYSPADVAQCEKEMEQAGLRPSLMVDCSHGNSNKDYRRQPAVAESVVAQIKDGNRSIIGLMIESNIHEGNQSSEQPRSEMKYGVSVTDACISWEMTDALLREIHKDLSGQLAVRVA", - "output": "3-deoxy-7-phosphoheptulonate synthase activity ; amino acid biosynthetic process ; aromatic amino acid family biosynthetic process ; chorismate biosynthetic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MIDTVEYAATTPDQPQPFAELGLREDEYQRVREILGRRPTDTELAMYSVMWSEHCSYKSSKVHLRYFGETTTEEMRTGMLAGIGENAGVVDIGDGWAVTFKVESHNHPSYVEPYQGAATGVGGIVRDIMAMGARPVAVMDQLRFGAADALDTRRVLDGVVRGIGGYGNSLGLPNIGGETVFDSCYDGNPLVNALCVGVLRQEDLHLAFASGAGNKIILFGACTGLDGIGGVSVLASDTFDAEGARKKLPSVQVGDPFMEKVLIECCLELYAGGLVIGIQDLGGAGLSCATSELASAGDVGMAIQLDTVPRRAKDMTPAEVFCSESQERMCAVVAPENVDAFLAVCRKWEVLATVIGEVTDGDRLRITWHGETVVDVPPRTVAHEGPVYQRPVSRPESQEALNADSSKGLPRPVSGDELRATLLALLGSPHLCSRAFITEQYDRYVRGNTVLAEHADAGVLRIDESTGRGIALSTDASGRYTRLDPYAGAQLALAEAYRNVAVTGATPVAVTNCLNFGSPEDPGVMWQFAQAVRGLADGCAALKIPVTGGNVSFYNQTGAVAILPTPVVGVLGVLDNVARRIHTSLGTEPGEILMLLGDTYDEFDGSVWAQVMAGHLGGLPPMVDLAREKLLAEVLSSASRDELVSAAHDLSEGGLAQAIVESALAGETGCRIALPEDADPFVMLFSESAGRVLVAVPRPEESRFRSMCEARGLPAMRIGVVDQGSDSIEVRGQFTVSLAELRMTFEAVLPRFFG", - "output": "cytoplasm ; ATP binding ; magnesium ion binding ; phosphoribosylformylglycinamidine synthase activity ; 'de novo' IMP biosynthetic process" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MTMTDPIADFLTRLRNANSAYHDQVKAPHSKLKANIAEILKREGYIADYRTEDAQVGKTLVVDLKYGPSRERSLAGVRRVSKPGLRVYAKSTNLPKVLGGLGVAIISTSQGLLTDKQAAKQGVGGEVLAYVW", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSVCVVTQKKVPDKLLDQTSVSHLFPITKYLGLLATGMTADARTLVQQARNEAAEFRFKYGYEMPVDVLSKWIADKSQVYTQHAYMRPLGVVAMILGIDEEKGPQLFKCDPAGHFFGHKATSAGSKEQEAINFLEKKMKNDPAFSYEETVQTAISALQSVLQEDFKASEIEVGVVKKEDPIFRVLTTEEIDEHLTAISERD", - "output": "cytoplasm ; nucleus ; proteasome core complex, alpha-subunit complex ; ubiquitin-dependent protein catabolic process" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MTREVVVVSGVRTAIGTFGGSLKDVAPAELGALVVREALARAQVSGDDVGHVVFGNVIQTEPRDMYLGRVAAVNGGVTINAPALTVNRLCGSGLQAIVSAAQTILLGDTDVAIGGGAESMSRAPYLAPAARWGARMGDAGLVDMMLGALHDPFHRIHMGVTAENVAKEYDISRAQQDEAALESHRRASAAIKAGYFKDQIVPVVSKGRKGDVTFDTDEHVRHDATIDDMTKLRPVFVKENGTVTAGNASGLNDAAAAVVMMERAEAERRGLKPLARLVSYGHAGVDPKAMGIGPVPATKIALERAGLQVSDLDVIEANEAFAAQACAVTKALGLDPAKVNPNGSGISLGHPIGATGALITVKALHELNRVQGRYALVTMCIGGGQGIAAIFERI", - "output": "acetyl-CoA C-acetyltransferase activity" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MEIENIVANTVYIKARESGGQKKGKSKKWKNYLQFPHYTECIPQKKENGEPYAFVVEKQPIGKLLFHEFCQATNPQYHQCCQFQTKVEEYETSDDDGQSRRDLASAIVALLSSKNDQDLSSSIDEEVWCAFLSDEVISTCISTADSATHDSEPRSDIFSEPYRLTREYLKQKPFAEFIQTMYFHRFLQWKWLEKRPVDKHTFRLYRVLGKGGFGEVCACQVRASGKMYALKKLEKKRVKKRHAETLSLNEKQILQKVNSPFVVSLAYAYETKDALCLVLTLMNGGDLKFHLYNLMPGGFDEKRVQFYAAEITLGLQHLHLEHILYRDLKPENILLDDFGHVRISDLGLAVELKDNEPIKGRVGTVGYMAPEIVKNERYTYGVDWWGVGCLIYEMIEGKAPFRQRKEKVKREEVERRVREDQEKYSEKFSEAARTLCRGLLHKEPGFRLGCRRVGKPEDGAEEIRAHPFFNTADTATGREPVPWKKMEAGKVTPPFCPDPRAVYAKDVLDIEQFSTVKGVRLDATDTQFYGKFNTGCVSIPWQSEMIETECFAELNTFYEEDGSLVWNLRPDGINMEERRNGTSKPGFFSRLFRKKNIEVTKSLHDLSRLGVDQQQPSTSAKPAAVRSSRAASASGRTSMI", - "output": "cytoplasm ; ATP binding ; G protein-coupled receptor kinase activity ; protein kinase activity ; protein phosphorylation ; regulation of signal transduction ; signal transduction" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MLDIQQLRSNLQNIITRLAQRGYDFPVADFESLESQRKSVQTLTQTLQAKRNSASKQIGIARQRGEDVSLIMAEVANMGDELKQAENQLEAVQTRLQQLLLEIPNLPHDSVPAGKDENDNLEMRRWGTPKTFDFPVQDHASIGEHLKLIDFETAAKLSGARFSLLKGGLARLHRALAQFMLDTHTQENGYNEIYVPYLVNADCLRGTGQLPKFEQDLFAVRSGAQEEADNPDKTGPAGLHLIPTAEVPLTNIVRNTIVPLENLPLQFVAHTPCFRSEAGSYGRDTRGLIRQHQFDKVELVQITHPEKSHEALESLVGHAEKILQKLELPYRVMLLCTGDMGFSAAKTYDIEVWLPAQQAYREISSCSNCEAFQARRMQARFRKGQEKPELLHTLNGSGLAVGRTLVAILENYQNEDGSITIPEILRAYMGGIERIGL", - "output": "cytoplasm ; ATP binding ; serine-tRNA ligase activity ; selenocysteine biosynthetic process ; seryl-tRNA aminoacylation" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MSSVVNAAYAEYNGKEKGDQEDPRVLIPQLCRLFYELGWVTGTGGGISLRHGEHIYIAPSGVQKERIQPEDLFVCDIDEKDISCPPPQKKLKKSQCTPPFMNAYTMRGAQAVIHTHSKSAVMATLLFPGKEFRITHQEMIKGIRKGNSGTNFRYDDTLVVPIIENTPEEKDLKERMARAMDMYPDSCAVLVRRHGVYVWGETWEKAKTMCECYDYLFDIAVQMKQSGLDPSAFPTEEKGIV", - "output": "cytoplasm ; methylthioribulose 1-phosphate dehydratase activity ; zinc ion binding ; apoptotic process ; L-methionine salvage from methylthioadenosine ; L-methionine salvage from S-adenosylmethionine" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MARTTPISRYRNIGIVAHVDAGKTTTTERVLFYTGKSHKMGEVHDGAATTDWMVQEQERGITITSAAITAFWKGSEKQYKDEHRFNVIDTPGHVDFTIEVERSLRVLDGAVVVFCGTSGVEPQSETVWRQANKYGVPRLVYVNKMDRAGANFLRVIGQIKQRLGHTPVPIQLAIGSEDNFQGQIDLLTMEAVYWNDADKGMVPVRKPIPAELQELADEWRNNMVEAAAEANEELMNKYLEGEELTNVEIKAALRQRTIAGEIVLAVCGSSFKNKGVPLVLDAVIDYLPAPVDIPAIKGTDPDDETIELERHADDAEPFSALAFKIATDPFVGTLTFVRVYSGVLNSGDGVINSVKGKKERVGRMVQMHANAREEIKEVRAGDIAALIGMKDVTTGETLCNADKPIILVRMDFPEPVISVAVEPKTKDDQEKMGIALGKLAQEDPSFRVKTDEETGQTIISGMGELHLDILVDRMRREFNVEANIGKPQVSYRERITKNCEIEGKFVRQSGGRGQFGHCWIRFAPADEGQEGLQFVNEVVGGVVPKEYIPAIQKGIEEQMKNGVVAGYPLIGLKATVFDGSYHDVDSNEMAFKVAASMATKQLAQKGGGELLEPIMAVEVVTPEDYMGDVMGDLNRRRGMILGMEDTVSGKVIRAEVPLGEMFGYATDVRSMSQGRASYSMEFKKYNTAPAHIAETVSKKQG", - "output": "cytoplasm ; GTP binding ; GTPase activity ; guanosine tetraphosphate binding ; translation elongation factor activity" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MLDMGDRKEVKMIPKSSFSINSLVPEAVQNDNHHASHGHHNSHHPQHHHHHHHHHHPPPPAPQPPPPPPQQQQQPPPAPQPPQARGAPAADDDKGPQPLLLPPSAALDGAKADALGAKGEPGGGPAELAPVGPDEKEKGAGAGGEEKKGAGEGGKDGEGGKEGDKKNGKYEKPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQNSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRSTTSRAKLAFKRGARLTSTGLTFMDRAGSLYWPMSPFLSLHHPRASSTLSYNGTTSAYPSHPMPYSSVLTQNSLGNNHSFSTANGLSVDRLVNGEIPYATHHLTAAALAASVPCGLSVPCSGTYSLNPCSVNLLAGQTSYFFPHVPHPSMTSQTSTSMSARAASSSTSPQAPSTLPCESLRPSLPSFTTGLSGGLSDYFTHQNQGSSSNPLIH", - "output": "nucleus ; DNA-binding transcription factor activity ; sequence-specific DNA binding ; sequence-specific double-stranded DNA binding ; aging ; axon midline choice point recognition ; brain development ; cell morphogenesis involved in neuron differentiation ; central nervous system neuron development ; cerebral cortex development ; dorsal/ventral pattern formation ; forebrain development ; inner ear morphogenesis ; negative regulation of DNA-templated transcription ; negative regulation of neuron differentiation ; negative regulation of transcription by RNA polymerase II ; neuroblast proliferation ; neurogenesis ; neuron differentiation ; neuron fate determination ; positive regulation of cell cycle ; positive regulation of neuroblast proliferation ; positive regulation of neuron differentiation ; pyramidal neuron migration to cerebral cortex ; regulation of cell cycle ; regulation of gene expression ; regulation of mitotic cell cycle ; regulation of neural precursor cell proliferation ; regulation of transcription by RNA polymerase II" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MAKKVAVIGAGVSGLTSIKCCLDEDLEPTCFERSNDIGGLWKYTETSKDGMTRIYWSLVTNVCKEMSCYSDFPFQEDYPNFMSHSKFWNYLQEFAEHFDLLKYIQFKTTVCSVTKRPDFSKTGQWDVVTETEGKQHRAVFDAVMVCTGKFLNPRLPLESFPGILKFRGQILHCQEYKIPEGFRGQRVLVIGLGNSGGDVAVELSRVAAQVLLSTRTGTWVISRSSNGGYPFNMMITRRCLNVIEQVLPSCFLRWINERQMNKRFNHENYGLSITKGKNPKFIVNDELPTCILCGTVTVKTSVKEFTETSAIFEDGTVEENIDSVIFTTGYVFSFPFLEEPLRSLCMKKMFLYKHVFPSNLERASMAIIGLISLKGSILTGTELQARWATRVFKGLCKIPPPQQLMAEVTKKEELIKRGVIKDTSEEKLSYIPYMDDLAACIGTKPNIPLLFLKDPRLAWEVFFGPCTPYQYRLMGPGKWDGARNAILTQWDRTLKPLKTRTVSSDSSKSASLSHYLKVWGAPLLLASVLLICKSSHFLKSVRDKLQNRIFPYLVL", - "output": "endoplasmic reticulum membrane ; flavin adenine dinucleotide binding ; hypotaurine dehydrogenase activity ; N,N-dimethylaniline monooxygenase activity ; NADP binding ; NADPH oxidation" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MKEILITNDDGFEATGLLALKEALSELDGVNVTIVAPSSEKSACAHSLTLTRPLRFIKLDDNFFKLDDATPSDCVYLALHALYNKKPDLVISGINHGANLGEDITYSGTCGAAMEGVLQGIRSIAFSQFYENNSLNELGFELAKEVVKFITPKVLNDEISLNPREFLNVNIPATTSKNFKGYAVVPAGRRTYATHATLNRNPRGIEYYWLGNAALEYEKGEPSDISKVNEGFATITPIKLNMTSYESLESLKGKFDAK", - "output": "cytoplasm ; metal ion binding ; nucleotide binding ; XMP 5'-nucleosidase activity" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MAAKDVKFGDSARKKMLVGVNVLADAVKATLGPKGRNVVLAKSFGAPTITKDGVSVAKEIELKDAFENMGAQLVKEVASKANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGIDKATAAIVAELKNLSKPCADSKAIAQVGTISANSDNSIGEIIAEAMEKVGKEGVITVEEGSGLENELSVVEGMQFDRGYLSPYFVNKPDTMVAELEGPLLLLVDKKISNIRELLPVLEAVAKAGRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGQVISEEIGLSLETATLEHLGNAKRVILSKENTTIIDGAGADGDIEARVKQIRAQIEETSSDYDREKLQERLAKLAGGVAVIKVGAGTEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALVRALAAIADLKGDNEEQNVGIALLRRAVEAPLRQITANAGDEPSVVADKVKQGSGNFGYNAATGEYGDMIEMGILDPAKVTRSALQAAASIGGLMITTEAMVADLPEDKPAAGMPDMGGMGGMGGMM", - "output": "cytoplasm ; ATP binding ; ATP-dependent protein folding chaperone ; isomerase activity ; unfolded protein binding ; protein refolding" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MATYHHWTVGQALALFDKPLLELLFEAQQVHRQHFDPRQVQVSTLLSIKTGACPEDCKYCPQSSRYKTGLESERLMQVEQVLESAKKAKAAGSTRFCMGAAWKNPHERDMPYLAKMVEGVKALGMETCMTLGSLSKQQAHRLADAGLDYYNHNLDTSPEFYGSIITTRSYQERLDTLNEVRDAGIKVCSGGIVGLGETVRDRAGLLVQLANLPKPPESVPINMLVKVKGTPLENNAEVDAFEFIRTIAVARIMMPSSYVRLSAGREQMNEQTQAMCFMAGANSIFYGCKLLTTPNPDEDKDLQLFRKLGLNPQQTATSHGDREQQQALTEQLLHGDTAQFYNAAV", - "output": "2 iron, 2 sulfur cluster binding ; 4 iron, 4 sulfur cluster binding ; biotin synthase activity ; iron ion binding ; biotin biosynthetic process" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MSAATPLIVQQAEAEQLLARIDVLQAMRQLFLDLAAGQALQPAQQLVEFPAGRGDFINYLGVLAQEQVYGVKTSPYIVREQGPLVTAWTLLMSMQTGQPLLLCDAARLTTARTAATTAVAVDALAPAEACRLALIGSGPVAHAHLQYVKGLRDWQGVRVHSPCLDERRLQSLRAIDPRAEAAGSLEEALDEADVILLCTSSARAVIDPRQLKRPALVTSISTNAPRAHEVPAESLAAMDVYCDYRHTTPGSAGEMLIAAEQHGWSPEAIRGDLAELLSAQAPRPEYRRPAFFRSIGLGLEDVALANALYRLRQAG", - "output": "oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor ; arginine catabolic process ; arginine metabolic process" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MVEDKKTDDYTIEMDKMDQGSKNFEAAAPPPQPRTPPAGSISNNPILPVLAYCGSSILMTVMNKYVLSGLDFNLNFFLLCVQSIVCIVAIQTCKSCGLITYRDFSADEARKWFPITLLLIGMIYTGSKALQFLSIPVYTIFKNLTIILIAYGEVLWFGGSVTGLTLFSFGLMVLSSIIAAWADIKHAVESTGDATAKVSTLNAGYIWMLVNCLCTSSYVLGMRKRIKLTNFKDFDTLAMFYNNLLSIPVLIVLTGLMEDWSSANITRNFPPADRNNIIFAMILSGLSSVFISYTSAWCVRVTSSTTYSMVGALNKLPIALSGLIFFDAPVTFPSVSAIVVGFVSGIVYAVAKIKQNAKPKTGVLPMSNPPVSASSQSMRDSLRS", - "output": "cytoplasmic vesicle membrane ; endoplasmic reticulum membrane ; Golgi membrane ; GDP-mannose transmembrane transporter activity ; carbohydrate transport" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MKQLTSSQVRQMFLDFFKEHGHMVMPSASLIPQDDPTLLWINSGVATMKKYFDGSVVPKNHRITSSQKSIRTNDIENVGKTARHQTFFEMLGNFSVGDYFKKEVIPWAWEFLTSPKWLGLDPDKLYVTVYPKDTEAYHMWHDVVGLPEDHIVKLEDNFWDIGEGPCGPDSEIFYDRGQENNDVAEDDPENFPGGENARYLEIWNIVFSQFNHLPNGKYVDQPHKNIDTGMGLERVVSIIQDAPTNFETDLFMPIIKETEKLSDGKKYAANKEDDVAFKIIADHVRAVSFAIADGALPSNSGRGYVLRRLIRRADLNGQRLGIKGAFLYKLVPVVGEIMKSHYPEVVDQQAFIQKVIKNEEERFQVTLSSGLNLLDNIIAEAKKSDDKTVSGKDAFKLFDTYGFPYELTFEAAQDAGLKVDKKGFDEEMKAQKERARKARGNLQSMGSQDVTLMNIKDKSEFEYGTLEEKHAKLIDIVVNDKLVDKADGEHATLIFDKTPFYAERGGQVADHGEILNQNGELVARVTDVQHAPNDQNLHFVDIILPLEKGQEYILKVDQKRRRGLKHNHTATHLLHAALREVLGTHTHQAGSLVEPDYLRFDFTSLEPMTKKEIANVEKIVNEKIWEEIPVKTTVTDPDTGLKMGALALFGEKYGDTVRVVQIDDFSTEFCGGTHCENTDQIGMLKIVSESAVGAGTRRIIAVTGPEAYKYVTDRDEILKEVQDEVKATKAEDVTNKISSLEEDLRASQKEAEQLKAQINKAKAGDLFNDVKQVKGLTVIAAQADVEGMNDLRELADNWKSSDKSDVLVLAAEVNGKANMVISLNDKAIKAGLKAGDLIKTAAPIFGGGGGGRPNMAQAGGKNPAGLKDAIAKVLQEVEEKQN", - "output": "cytoplasm ; alanine-tRNA ligase activity ; ATP binding ; transferase activity ; tRNA binding ; zinc ion binding ; alanyl-tRNA aminoacylation" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MAHVITRINAREILDSRGNPTVEVDLETNLGIFRAAVPSGASTGIYEALELRDNDKSRYLGKGVQKAIKNINEIIAPKLIGMNCTEQKKIDNLMVEELDGSKNEWGWSKSKLGANAILAISMAVCRAGAAPNKVSLYKYLAQLAGKKSDQMVLPVPCLNVINGGSHAGNKLSFQEFMIVPVGAPSFKEALRYGAEVYHTLKSEIKKKYGIDATNVGDEGGFAPNILNANEALDLLVTAIKSAGYEGKVKIAMDVAASEFYNSENKTYDLDFKTPNNDKSLVKTGAQLVDLYIDLVKKYPIVSIEDPFDQDDWENYAKLTAAIGKDVQIVGDDLLVTNPTRITKALEKNACNALLLKVNQIGSITEAIEACLLSQKNNWGVMVSHRSGETEDVFIADLVVALRTGQIKTGAPCRSERNAKYNQLLRIEESLGNNAVFAGEKFRLQLN", - "output": "cell surface ; cytoskeleton ; cytosol ; nucleus ; pellicle ; phosphopyruvate hydratase complex ; plasma membrane ; vacuole ; magnesium ion binding ; phosphopyruvate hydratase activity ; protein homodimerization activity ; biological process involved in symbiotic interaction ; entry into host ; glycolytic process" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MAFALPSSLVSVCDKSFIKPSSLTPSTLRFHKLSFIDQSLSNMYIPCAFFYPKVQQRLEDSKNSDELSHIAHLLQTSLSQTLVSYYPYAGKLKDNATVDCNDMGAEFLSVRIKCSMSEILDHPHASLAESIVLPKDLPWANNCEGGNLLVVQVSKFDCGGIAISVCFSHKIGDGCSLLNFLNDWSSVTRDHTTTTLVPSPRFVGDSVFSTKTYGSLTTPQILSDLNECVQKRLIFPTDKLDALRAKVAEESGVKNPTRAEVVSALLFKCATKASSSMLPSKLVHFLNIRTMIKPRLPRNTIGNLSSIFSIEATNMQDMELPTLVRNLRKEVEVAYKKDQVEQNELILEVVESMREGKLPFENMDGYENVYTCSNLCKYPYYTVDFGWGRPERVCLGNGPSKNAFFLKDYKAGQGVEARVMLHKQQMSEFERNEELLEFIA", - "output": "aminoacyltransferase activity ; alkaloid biosynthetic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MAKIIGIDLGTTNSCVAVMEGDKPKVIENSEGHRTTPSIVAFTDDNEILVGQSAKRQSVTNPEKTLFAIKRLIGRRFDDPIVQKDIKMVPYKIMKADNGDAWVRVKDQDKAPPQISAEVLRKMKKTAEDYLGEEVKEAVITVPAYFNDSQRQATKDAGRIAGLEVKRIINEPTAAALAYGMDKKRGDSVIAVYDLGGGTFDISIIEIAEVDGEHQFEVLATNGDTFLGGEDFDLALIEYLASEFKKDTGIDLHNDPLALQRLKEAAEKAKIELSSAQQTDVNLPYITADASGPKHLNIKLTRAKLESLVEKLVERTIEPCKTALKDAGLTVSQINEVILVGGQTRMPLVQKTVEEFFGKEPRKDVNPDEAVAVGAAIQAAVLSGEVKDILLLDVTPLSLGIETMGGVMTKLIEKNTTIPTKATQVFSTADDNQTAVTVHVLQGEREQASANKSLGRFDLRDIPPAPRGVPQIEVTFDIDANGILNVSAKDKATGKAQSIVIKASSGLSEEEVAAMVKDAQSHAEEDKKFKEMAELRNQADSLIHSCEKSMKDLADELSEDEKRGIETAISELKEAVQGTDKARIEDKLKVLTDASAKMAERIYAKKSSEGQAAQGQTQSQESTKPAEEGVVDAEFEEVKEEDKK", - "output": "ATP binding ; ATP-dependent protein folding chaperone ; unfolded protein binding" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MTKLIFMGTPDFSATVLKGLLTDDRYEILAVVTQPDRAVGRKKVIQETPVKQAAKEAGLSIYQPEKLSGSPEMEELMKLGADGIVTAAFGQFLPSKLLDSMDFAVNVHASLLPRHRGGAPIHYALIQGDEEAGVTIMEMVKEMDAGDMISRRSIPITDEDNVGTLFEKLALVGRDLLLDTLPAYIAGDIKPEPQDTSQVTFSPNIKPEEEKLDWNKTNRQLFNQIRGMNPWPVAHAFLKGDRFKIYEALPVEGQGNPGEILSIGKKELIVATAEGALSLKQVQPAGKPKMDIASFLNGVGRTLTVGERFGD", - "output": "methionyl-tRNA formyltransferase activity" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MLVLGIESSCDETGVALVDAGGSEVPRLLSHALFSQIQMHQAYGGVVPELASRDHIRRVLPLTRQVMAQAGRSLAQVDVVAYTRGPGLAGALLVGAGVACALAAALGKPVMGVHHLEGHLLSPFLSADPPVFPFVALLVSGGHTQLMRVDRVGSYELLGETIDDAAGEAFDKSAKLMGLPYPGGPHLADLARQGDGTAFKLPRPLLHSGDLDFSFAGLKTAVLTQAKKLGPELENRKADLAAATQAAIVDVLVKKSLAAMAQTGLKRLVVAGGVGANALLRSQLNAACQQRGIRVHYPELHLCTDNGAMIALAAGMRLQAGLETLQRGYTFDVKPRWSLTPTVARSA", - "output": "cytoplasm ; iron ion binding ; N(6)-L-threonylcarbamoyladenine synthase activity ; tRNA threonylcarbamoyladenosine modification" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MSASRFVKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKLDLRDDKQFFIDHPGAVPITTAQGEELRKQIGAPTYIECSSKTQENVKAVFDAAIRVVLQPPKQKKKKSKAQKACSIL", - "output": "apical part of cell ; cell cortex ; cell projection ; cytoplasm ; cytoplasmic vesicle ; cytoskeleton ; nucleolus ; nucleus ; phragmoplast ; plasma membrane ; spindle ; GTP binding ; GTPase activating protein binding ; GTPase activity ; protein kinase binding ; actin filament organization ; cortical cytoskeleton organization ; establishment of vesicle localization ; establishment or maintenance of cell polarity ; pollen tube growth ; regulation of actin cytoskeleton organization ; regulation of actin filament depolymerization ; regulation of actin filament polymerization ; regulation of cell shape ; regulation of exocytosis ; small GTPase mediated signal transduction" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MATAASNPYSILSSSSLVHADSAVMQQGSPFRNPQKLLQSDYLQGIPSNGHPLGHHWVTSLSDANPWSSLASSPLDQQDIKPGREDLQLGAIIHHRSPHVSHHSPHNNHPNTWGASPVHNSSGQPINVYSQPGFTVSGMLDHGGLTPPPPSGTTQSLHPVLREATDHGDLGSHHCHDHSDEETPTSDELEQFAKLFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSSTGSPTSIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAALEISSLADSLQLEKEVVRVWFCNRRQKEKRMTPPGDPQQHEIYSHSVKTDTSCNEL", - "output": "nucleus ; DNA binding ; DNA-binding transcription factor activity, RNA polymerase II-specific ; brain development" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MTRVKRGYVARKRRRSILCQRAGSRGAHSILFRNAQQQNMKAMIYSHEHRKKRKRDFRSLWVTRINAAVREQGLSYNKFIFLLKTHKVLLNRKMLAQIAILDITSFKKLLLVIN", - "output": "chloroplast ; ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; ribosomal large subunit assembly ; translation" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MSAAQGWDRNRRRGGGAAGGGGGGSGAGGGSGGNGGRGTGQLNRFVQLSGRPHLPGKKKIRWDPVRRRFIQSCPIIRIPNRFLRGHRPPPARSGHRCVADNTNLYVFGGYNPDYDESGGPDNEDYPLFRELWRYHFATGVWHQMGTDGYMPRELASMSLVLHGNNLLVFGGTGIPFGESNGNDVHVCNVKYKRWALLSCRGKKPSRIYGQAMAIINGSLYVFGGTTGYIYSTDLHKLDLNTREWTQLKPNNLSCDLPEERYRHEIAHDGQRIYILGGGTSWTAYSLNKIHAYNLETNAWEEIATKPHEKIGFPAARRCHSCVQIKNDVFICGGYNGEVILGDIWKLNLQTFQWVKLPATMPEPVYFHCAAVTPAGCMYIHGGVVNIHENKRTGSLFKIWLVVPSLLELAWEKLLAAFPNLANLSRTQLLHLGLTQGLIERLK", - "output": "Cul2-RING ubiquitin ligase complex ; cytoplasm ; nucleoplasm ; ubiquitin ligase-substrate adaptor activity ; positive regulation of stress-activated MAPK cascade ; protein ubiquitination ; ubiquitin-dependent protein catabolic process via the C-end degron rule pathway" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MSMSGSDFGAPCDDPKIFRNICRDRILKDLLQPDKDKETKSSWKVLIMDKFTVRIMAYACKMAEITDAGISLVEDLFKRREPMPSMDAIYFLQPLKENVIMLLSDMSGRCPLYRKAYIFFSSPIPKELVSYIKNDSSVIPRIGALREMNLEFFAIDMQGFTTDHDMAFTDLYSAQHNSKKFNDTISTMATRIATTFASLKEFPCVRYRAPKGTDPMTTPKFDMVPKWLATAVWDIVSKYKSTIPEFPQKETCELLIVDRPIDQIAPVIHEWTYDAMCHDLLEMDGQKYIYEVSKAGSEPERKEALLEDHDPLWVELRHIHIADASERLYDKMNNFVSKNKAAQLHSRDGGEISTKDLQKIVQALPQYGEQVEKLTLHIEIAGKINKFIREYGLRDIGQVEQDLVFGDAAAKEVISILRSKQDMSPENKLRLLIIYAIVYPEKFEGDKGEKLMQLAKLPHDEMDAINSLRYLVGSDTKKASRPGGFSLKFDAQKKKNAARTERQDGDETWALSRFFPLIEELIEKLSKGALPLNEYPSMSEPSSTEQGSTQSAAATKPAQAQPMSRRSRRTPTWAKSRNSDDSQSSDSSVLRHGSNDFKRLGNRIFVFMIGGATRSELRTVHKLTMKLKREIVLGSSSIDDPPQFISKLKMLTAGGANDV", - "output": "plasma membrane ; secretory granule ; syntaxin binding ; intracellular protein transport ; vesicle docking involved in exocytosis ; vesicle-mediated transport" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MYPSNKKKKVWREEKERLLKMTLEERRKEYLRDYIPLNSILSWKEEMKGKGQNDEENTQETSQVKKSLTEKVSLYRGDITLLEVDAIVNAANASLLGGGGVDGCIHRAAGPCLLAECRNLNGCDTGHAKITCGYDLPAKYVIHTVGPIARGHINGSHKEDLANCYKSSLKLVKENNIRSVAFPCISTGIYGFPNEPAAVIALNTIKEWLAKNHHEVDRIIFCVFLEVDFKIYKKKMNEFFSVDDNNEEEEDVEMKEDSDENGPEEKQSVEEMEEQSQDADGVNTVTVPGPASEEAVEDCKDEDFAKDENITKGGEVTDHSVRDQDHPDGQENDSTKNEIKIETESQSSYMETEELSSNQEDAVIVEQPEVIPLTEDQEEKEGEKAPGEDTPRMPGKSEGSSDLENTPGPDAGAQDEAKEQRNGTK", - "output": "nucleolus ; nucleoplasm ; nucleus ; ADP-ribosylglutamate hydrolase activity ; deacetylase activity ; hydrolase activity, acting on glycosyl bonds ; brain development ; DNA damage response ; peptidyl-glutamate ADP-deribosylation ; protein de-ADP-ribosylation ; purine nucleoside metabolic process ; response to bacterium" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MTTDKDKMAVGRLKSRPQFLAVRAGESRRGPLFLLEVLDRNDPEGEARVGFTVTKKHGNAVERNRMRRRLKEAVRLSAGFAMKPGHDYVIVARRDLLNAPFDALTRALRDRIENKPKQKRPPAGSRKS", - "output": "ribonuclease P activity ; tRNA binding ; tRNA 5'-leader removal" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MRIEEDLKLGFKDVLIRPKRSTLKSRSDVELERQFTFKHSGQTWSGVPIIAANMDTVGTFEMAQALAGFDILTAVHKHYTVEEWAAFINTASADVLKHVMVSTGTSDADFEKTVQILALNPALNFVCIDVANGYSEHFVQFVAKAREAWPTKTICAGNVVTGEMCEELILSGADIVKVGIGPGSVCTTRVKTGVGYPQLSAVIECADAAHGLGGMIVSDGGCTMPGDVAKAFGGGADFVMLGGMLAGHEESGGSVVEENGEKFMLFYGMSSESAMNRHVGGVAKYRAAEGKTVKLPLRGPVGNTARDILGGLRSACTYVGASRLKELTKRTTFIRVQEQENRIFNSL", - "output": "GMP reductase complex ; GMP reductase activity ; metal ion binding ; purine nucleotide metabolic process" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MEKSSSSLIDPPSLSGDEIRDAFINFFVQHNHKKLASSSLIPDDPTVLLTIAGMLPFKPIFLGLKESSTPRATSSQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKKEAIQWAWELSTEVFRLNPQNIVISVFKEDLEAEQIWKEVVGVDANRIIRMGAADNFWSSGATGPCGPCSELYFDFKPELGSDEIDLEDDSRFIEFYNLVFMQYNRDLKGNLEPLANCHIDTGMGLERMAQILQKKSNNYETDLIFPLINAAALLAQIKYETTNKKNKTSLKIIGDHCRAVTHLICDGVSASNLGRGYILRRLIRRMIRHGRLVGIIQPFLPQLAEIAIELMKNAYPQLLEKKKIILNELKIEESRFLETLERGEKLLAEITSHECDLISGAQAFELYDTYGFPLELTEEIANEKGISVDINGFENEMAKQRKRAKEASVSIDLTEEGSIEREISLFDDTRFEGYEKLETTSTVIGIFKNNESVKQAVQGDLVKIIVNRTPFYAESGGQIGDKGLITSQDLEVSVENVRKKKNIFIHSGIVNTGVLEINSSVQMNVTPSFRQRTTSNHTATHLLQSALKLSIDSSVSQRGSLVSNHRLRFDFNAPKPLTIKELEDMEARINQWINEDHLIQIKTMPIKEAMAAGALAMFGEKYGDVVRVVDVPGISMELCGGTHVTRTSQLGTFKIINETGIASGIRRIEAIAGPSVLDYFNERDLVVKELSKSFKVQSYEIVERVSSLQLELKDKTKELIKVKNELALAKALGLATYAKSVGKSKLLIRRLDGVDGSGLQSAASSLIDHLGKYSAVIFGGIPNQEIDNKLVFVAAFSPDLVSDGLHAGKFISGVAKMCGGGGGGRPNLAQAGGSQPQSLDLALEKANENLTQQLS", - "output": "cytoplasm ; alanine-tRNA ligase activity ; ATP binding ; tRNA binding ; zinc ion binding ; alanyl-tRNA aminoacylation" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MDDNKPKSNTFTDEGRLPQVEFAIKNVSRAGTIIGYVCSDGVVLMGVNKEPTNGPMEKIYQLSDSIYCVLCGLFGDAMELKRYARIKAQEVLERFGVECPLTTLCKFVGQRKQAFTQYAGTRPFGVSFLYAGVIDGKYALMSTDPSGTSNRWKGMCYGENEEAINRGLKNDFPEDEMDMKTATVEILRLLGKARELGPKEADRLEILHFSKDCKKYLPCDEVLKLLEEIHAK", - "output": "cytoplasm ; nucleus ; proteasome core complex, alpha-subunit complex ; proteolysis involved in protein catabolic process" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MQKRLTLLGSTGSIGDSTLDVVARHPERFSVYALTAHRNGDKLVEQCLRFAPEVAVVGDAATAAHVDAKLRAAGSKTVVLHGPQALVDVSKSDGCDTVVAAIVGAAGLAPSLAAARAGKRILLANKEALVMSGAIFMDAVRDHGAILLPVDSEHNAIFQCMPRDAAEHGGISKIILTASGGPFRTREPATLVDVTPDEACKHPNWVMGRKISVDSATMMNKGLEVIEAHWIFGLPGDRIDVLIHPQSVIHSLVSYRDGSVLAQLGNPDMRTPIAHALAFPERVDAGVDQLDLAQIAQLSFEKPDYARFPCLALALKALEEGGIASAALNAANEVAVEAFLERRIGFMAIAATVDAVLNTLPNRAPDGLDDVLAADAEARRLAAAIIAKAPAPRVERTV", - "output": "1-deoxy-D-xylulose-5-phosphate reductoisomerase activity ; metal ion binding ; NADPH binding ; isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway ; terpenoid biosynthetic process" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MATARPSIVGPDSGPESPFPYKMEGKVISGFGRGSKELGIPTANLPVDATISPWISSISSGVYYGWASLQLPPSHPESPSSSSCSPYVVFPMVMSIGYNPFYNNTERSAEVHILHKFTADFYDAPMRLLILGFIRDEKNYDSLEALVKDINTDCDVARTSLDRKAWVPQGGLLHPAVDVREKQGDLDGSWLVRPNDSPSA", - "output": "ATP binding ; metal ion binding ; riboflavin kinase activity ; FMN biosynthetic process ; phosphorylation ; riboflavin biosynthetic process" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MVAVLQSTLPIIFSMEFIMGTLGNGFIFLIVCIDWVQRRKISLVDQIRTALAISRIALIWLIFLDWWVSVHYPALHETGKMLSTYLISWTVINHCNFWLTANLSILYFLKIANFSNIIFLYLKFRSKNVVLVTLLVSLFFLFLNTVIIKIFSDVCFDSVQRNVSQIFIMYNHEQICKFLSFTNPMFTFIPFVMSTVMFSLLIFSLWRHLKNMQHTAKGCRDISTTVHIRALQTIIVSVVLYTIFFLSFFVKVWSFVSPERYLIFLFVWALGNAVFSAHPFVMILVNRRLRLASLSLIFWLWYRFKNIEV", - "output": "membrane ; bitter taste receptor activity ; G protein-coupled receptor activity ; taste receptor activity ; detection of chemical stimulus involved in sensory perception of bitter taste" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MAYPFQMGLQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTQELKPGELRLLEVDNRVVLPMELTIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMAMRPGLYYGQCSEICGSNHSFMPIVLELVPLSHFEKWSASLL", - "output": "mitochondrial inner membrane ; respiratory chain complex IV ; copper ion binding ; cytochrome-c oxidase activity" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MMLRSQAKNVDLTSQADSRHQQKRKQAEQLDALKNPSEPAAKKQHSKGLTELRAHISGFKIDSAKRDPLGKSRTSRRDVENLPPQKSRYVDPCPHYDYDLEEAGNPDSISDYAQGIFDYYRHREVHFRVRKYLHKHPEVDVKTRAILIDWMVEIQETFELNHETLYNAVKLTDMYLCKTKNVDKNTIQKLACVAIFIAAKYDERSPPLVDDLIYLSGDRFSRDELLAMERELFATVGYDLGSPLSYRYLRRFGRVCRVDMKTLTMGRFILETSLMVYEYAMVSQSRLAAAAFVLAMRMLDKNNEYEWNPVLEKYSGFTGEEVMPLVEHMNHILHFSKDKWAQLTSVRQKYSHEVFFHVASIPMLPDTLKVVDSHTYAPVPMLSYP", - "output": "centrosome ; cyclin-dependent protein kinase holoenzyme complex ; cytoplasm ; nucleus ; cyclin-dependent protein serine/threonine kinase regulator activity ; cell division ; centrosome cycle ; kinetochore organization ; meiotic cell cycle ; meiotic sister chromatid segregation ; mitotic cell cycle ; mitotic cell cycle phase transition ; mitotic sister chromatid segregation ; nematode male tail tip morphogenesis ; oocyte maturation ; positive regulation of mitotic metaphase/anaphase transition ; positive regulation of protein phosphorylation ; pronuclear migration ; regulation of cyclin-dependent protein serine/threonine kinase activity ; regulation of meiotic cell cycle" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MSKQFVRSAKNMMKGYSSTQVLVRDATANDSRTPSIDTLDDLAQRSYDSVDFFEIMDMLDKRLNDKGKYWRHVAKSLTVLDYLVRFGSENCVLWCRENFYVIKTLREFRHENESGFDEGQIIRVKAKELVSLLNDEERLREERSMNTRNRRANRAARPRPRRQRTRSNPHDSSPSYQDDLEKALEESRITAQEDEQRRRELAQYDDEDPDFQAALQLSKEEEELKQLQELQRLQKQQQSLSQFQAPLQQQQPQQQPAYYDIFGNPISQDEYLQYQYQQDQEQAMAQQRWLDQQQEQQQLAEQQYFQQQQQAAAAASALQQQQTAANMQQQQQQPADFQQPLPTGSNNPFSMDNLERQKQEQQHAQLQRQQEEARQQQEQLKLQQLQRQQQEEAQLHQKRQEEAQLQQQQAQLLQQQAQFQQQQPLKQTRTGNQSISDKYSDLNTLLATGTGIDTFGNTGEARIPAQHTKTGTFINSQGTGYKQVTNEPKNNPFLSNQYTGLPSTNIVPTQTGYGFGNQPQSPPTNSPQQNPTGISYSQPQQQQQPQQQPQYMQNFQQQQPQYAQNFQQQPQYTQNYQQQPQYIQPHQQQQQQQQQQQQQQGYTPDQGVSLIDL", - "output": "clathrin vesicle coat ; endosome ; mating projection tip ; plasma membrane ; clathrin binding ; phospholipid binding ; actin cortical patch assembly ; actin filament organization ; endocytosis" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MSTANPETPNSTISREASTQSSSAATSQGYILPEGKIMPNTVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDRTGVSKGYGFVSFFNDVDVQKIVESQINFHGKKLKLGPAIRKQNLCAYHVQPRPLVFNHPPPPQFQNVWTNPNTETYMQPTTTMNPITQYVQAYPTYPNSPVQVITGYQLPVYNYQMPPQWPVGEQRSYVVPPAYSAVNYHCNEVDPGAEVVPNECSVHEATPPSGNGPQKKSVDRSIQTVVSCLFNPENRLRNSVVTQDDYFKDKRVHHFRRSRAMLKSV", - "output": "cytoplasm ; nucleus ; protein-containing complex ; mRNA 3'-UTR binding ; RNA binding ; translation activator activity ; 3'-UTR-mediated mRNA stabilization ; germ cell development ; positive regulation of translational initiation ; spermatogenesis" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MITAVNRPAALHINLAAIKENTRQAKAHLKPGQKLFCVVKANAYGHGAARLAPVMEEAGADGFCVAMLDEGLELRRAQIVKPILVLGLQPAEESALAAANDISLPVSSLDWLKKAEKVLRKEGLQLKIHLAIDSGMGRIGFSEDEDFKAVNEYLQGNDAFFVEGMFTHFASADSADASYFDYQVKRFKHMESLLTVKPKWIHVDNTAAILFDKDVASDIVRFGIGLYGLNPSSAPGSRDLEPAFALEPAMSFVSELTYVKQIHKGYGVGYGSTHIAEEDEWIGTVPVGYADGWIRKFQGFKVKVGDTYCPIVGRVCMDQFMVLLPKEVPAGTPVELISADPAAPNSLRRAADWLDTIHYEVACQFNDRLDRIYDNE", - "output": "alanine racemase activity ; pyridoxal phosphate binding ; D-alanine biosynthetic process" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MANIQGGQQIGTNQGKGQSAADKLALFLKVFGGEVLTAFARTSVTMPRHMLRSIASGKSAQFPVIGRTKAAYLKPGENLDDKRKDIKHTEKVIHIDGLLTADVLIYDIEDAMNHYDVRAEYTAQLGESLAMAADGAVLAELAGLVNLPDGSNENIEGLGKPTVLTLVKPTTGSLTDPVELGKAIIAQLTIARASLTKNYVPAADRTFYTTPDNYSAILAALMPNAANYQALLDPERGTIRNVMGFEVVEVPHLTAGGAGDTREDAPADQKHAFPATSSTTVKVALDNVVGLFQHRSAVGTVKLKDLALERARRANYQADQIIAKYAMGHGGLRPEAAGAIVLPKGVGVIPDPTGVTLSQKTMTLVEGASRALTGTVQPSDANQSLSWSSSAEDVAVWEAGKVVAKGVGTADITATTSNGLIASCKVIVNAATS", - "output": "viral capsid" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MEKTQDRDTLSGRMEAEGSLNSEELPPHPQSPPPPPSPRSPTSPVTPELPQPNAPTEVEARQLLVEEWGPLSGKLELPPRISWQLLFLERPLYRNLLSSPNPEGINIYQPAPPTGPTRKPLKELGNFRGWYITTQNLQGPLSWTVKEQCVNLLAKKLWEELLDDEQPDITIMDWFEDSRLDQCVYELHVWLLAADRRTVIAQHHVAPRTNGRGPPGRWIQVSHVFRQYGPGVRFVYFQHKAKNRMEPGGLRRTRVTDSSVSVQLRE", - "output": "cytoplasm ; SCF ubiquitin ligase complex ; glycoprotein catabolic process ; positive regulation of cell population proliferation ; SCF-dependent proteasomal ubiquitin-dependent protein catabolic process ; ubiquitin-dependent ERAD pathway" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MNDVVKVGMADLNVVTPPHTIRTAGLGSCVGVVLYDDVKKVAGMAHIMLPDSALGKKQEFNRAKYADTALDLLLSKLEAIGAKRYSLKAKMAGGAQMFSFASNNDMMRIGQRNVEAVKKKLRELSIPILAEDVGGSNGRTIEFNPETKRLSIRTVHQGEKEI", - "output": "protein-glutamine glutaminase activity ; chemotaxis" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MTQAITVEESRELDDKTINKIGIPSLVLMERAGLKIYENMLDNKDLDLSNVLILAGTGNNGGDGLVVARLLATHGYQVSILTVGNPDHASEDHLAQARICNYYQIPKVFMNADFNKFTTLVDALFGSGLSRNVGGDFATIIDKANASTAKIHAIDIPSGLNGDTGDVMGTAIKAISTSTVAYPKVGMLKDQAKPYTGKIYVDDIGIYRGNAFENE", - "output": "metal ion binding ; NADHX epimerase activity ; NADPHX epimerase activity ; nucleotide binding" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MSKEKFERTKPHCNIGTIGHVDHGKTTLTAAITKVLSETGGAVFTDYDQIDKAPEEKKRGITISTSHVEYETTKRHYAHIDCPGHEDYVKNMITGAAQMDGAILVVSAVDGPMPQTREHILLSRQVGVPSLVVFLNKVDMVNDPEMLDLVEMEVRELLLSYKYPGDEIPIIRGSALKALQGEIEYKKSILKLMEAVDNYIPQPERSFDRPFLMPVEDVFSIAGRGTVVTGRVEQGQIKIGDAVEIIGLGSTVKTTCTGIEMFHKLLDYGQAGDNLGMLIRGIQRDAVQRGQVICAPGSVKPHTKYEAQVYILTKEEGGRHKPFFNNYRPQFFFRTADVTGTIQLPKDVEMVNPGDNVKLIIELITPIAMEEGIRFAMREGGRTIGAGVVSKIIE", - "output": "mitochondrion ; GTP binding ; GTPase activity ; translation elongation factor activity" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MHINIAWQDVDTVLLDMDGTLLDLAFDNYFWQKLVPETWGAKNGVTPQEAMEYMRQQYHDVQHTLNWYCLDYWSEQLGLDICAMTTEMGPRAVLREDTIPFLEALKASGKQRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTHTFGYPKEDQRLWHAVAEATGLKAERTLFIDDSEAILDAAAQFGIRYCLGVTNPDSGIAEKQYQRHPSLNDYRRLIPSLM", - "output": "metal ion binding ; XMP 5'-nucleosidase activity" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MKPLRLSSLDPVRMPEWRWAPFLSHAINALIPLKPEPYPVAPEFLQREGKTGSKSQPIKVTTCTWACRTKKFRQVRAACVEAGSSASVLNFVINPYHTFDLPFFGADLVTLPSGHLLALDLQPAITSDERHTKQVWERLMPIFEQWRVRLPEGGPIPEEAKPYFSPGFLWTRLHLGSEGNQLIDEVIMPAFRDYLNLYLDLVEMAEEVSPQRAFKLLEGQKRYLSYRGKKDPARAMLARFHGHQWTESYIHNVLFDL", - "output": "cobalt ion binding ; phycoerythrobilin:ferredoxin oxidoreductase activity ; phytochromobilin biosynthetic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MANRLKEKYLNEVVPALTEQFNYSSVMAVPKVDKIVLNMGVGEAVSNAKSLEKAAEELALISGQKPLITKAKKSIAGFRLREGVAIGAKVTLRGERMYEFLDKLVSVSLPRVRDFHGVPTKSFDGRGNYTLGVKEQLIFPEINFDDVDKTRGLDIVIVTTANTDEESRALLTGLGMPFAK", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; tRNA binding ; translation" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MSERKYFGTDGVRAVAGEFPLTSAWVMSLGAAAGEVLRRVNPHARVVIGKDTRQSGDMLEAALAAGLTSRGVTVIHVGVLPTPGVSYLTRHLKADAGVVISASHNPYEDNGIKFFGADGQKLSDATELQIEAAIDEVPGFAPLTGTAMGSVTNYTEAEHLYTDFLKSHAPDLSGLKIALDCANGAAYRVAPKVFQAAGADVFAIYTTPDGRNINRGCGSTHMDHLRQIVREGEYDLGVAFDGDADRALFVDSRGQVVHGDHMLLLNARARGEQAVVATIMTNMALEAKLQDAGIPLERTAVGDRYVHERLHEKGLSLGGEQSGHVLFLDISPTGDGVLTALLTLASMKKLGTTLDALHDDLVMYPQTLVNVRVQDKKAIAVDQQVQQAVRQAEEQLLGRGRVNLRPSGTENLIRVMVEGQDAAEIHEVARVLAGVVEARGQA", - "output": "magnesium ion binding ; phosphoglucosamine mutase activity ; carbohydrate metabolic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MSQDKKTPLYETHRTLGAKMIPFGGWDMPVQYSGIIAEHNATREAAGLFDVSHMGEIFITGNPKSILLFLESITCNSVASLSDFQVQYNAILNQNGGLVDDVTIYKFSSEKYMICSNASNYEAVTEHLLEHLPISGVKVDNQSLQWHQIALQGPKANEIFSKFLKRDLDSIQYYRFMLLPYQGEEIIVSRTGYTGEDGFEIYSSIPIGLKLWNELLEFGKPYGLLPCGLGARDTLRIEAKYPLYGHELNDQWTPIESGIGWIVKEKENPYFSSEKILFQKKNGVPSKIVSFALTEAGVPRENFRVLDSQGNEIGKTTSGTFSPSLKKGIGLALIQSEKIKDGEPIQIEIREQPKQAIITMKPFIPGSIRKN", - "output": "cytosol ; aminomethyltransferase activity ; transaminase activity ; glycine decarboxylation via glycine cleavage system" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "GIPCAESCVYIPCITAALGCSCKNKVCYRN", - "output": "defense response" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MEVPMDCPGCENKVRKALEKMNGVHDVQIDIKQQRVTVTGSAEQKKVLKVARNVTKRDICLWSYPYHPESNGYNDRYFKKKFRKRINMSVNGEKVSSYNYHKHGYHGHEHGYYQERPYSGLINPSASSMFSEENPHFCSIM", - "output": "metal ion binding ; response to stimulus" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MTRLTLALDVMGGDFGPSVTVPAALQALNANSQLTLLLVGNPDIITPLLAKADFEQRSRLQIIPAQSVVASDARPSQAIRASRGTSMRVALELVKEGRAEACVSAGNTGALMGLAKLLLKPLEGIERPALVTVLPHQQKGKTVVLDLGANVDCDSTMLVQFAVMGAVLAEEVVGIKNPRVALLNIGEEETKGLDSIREASLMLKTVPTINYIGYLEANELLTGKTDVLVCDGFTGNVTLKTMEGVVRMFLSLLKSQGEGKKRSWWLLLLKRWLQKSLTRRFSHLNPDQYNGACLLGLRGTVIKSHGAANQRAFAVAIEQAVQAVQRQVPQRIAARLESVYPAGFEPLDDGKGVNLRAHR", - "output": "cytoplasm ; phosphate:acyl- acyltransferase activity ; fatty acid biosynthetic process ; phospholipid biosynthetic process" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "STHGKIRIHDYVANGYVILFSHPGDFTPVCTTELAAMANYAKEFEKRGVKLLGISCDDVQSHKEWTKDIEAYKPGSKVTYPIMADPDRSAIKQLNMVDPDEKDAEGQLPSRTLHIVGPDKKVKLSFLYPSCTGRNMDEVVRAVDSLLTAAKHKVATPANWKPGECVVIAPGVSDEEAKKLFPQGFETKDLPSKKGYLRFTKV", - "output": "cytoplasm ; nucleus ; thioredoxin-dependent peroxiredoxin activity" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MDQNGMEIPVTLIIKAPNQKYSDQTISCFLNWTVGKLKTHLSNVYPSKPLTKDQRLVYSGRLLPDHLQLKDILRKQDEYHMVHLVCTSRTPPSSPKSSTNRESHEALASNSNSSSDQSGSSTPSSSQETLTLATSSSSEGLRQRTLPQAQTDPAQSHQVPYVMQGNVDNQLPGQAVPAGFPVYPAFNPLQMLWWQQMYAHQYYMQYQAAVSAQATSNANPAQPAATQPLNLAHVPGEEPPPAPNLVAQENRPMNENVQMNAQGGPVLNEEDFNRDWLDWMYTFSRAAILLSIVYFYSSFSRFIMVMGAMLLVYLHQAGWFPFRQEGVQHQAPNNNAEVNNDVQNANNLELEEMERLMDDGLEDESGEDAGEDASAIQRPGLMASAWSFITTFFTSLIPEGPPQVAN", - "output": "membrane ; endoplasmic reticulum unfolded protein response ; spermatogenesis" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MSDNAQLTGLCDRFRGFYPVVIDVETAGFNAKTDALLEIAAITLKMDEQGWLMPDTTLHFHVEPFVGANLQPEALAFNGIDPNDPDRGAVSEYEALHEIFKVVRKGIKASGCNRAIMVAHNANFDHSFMMAAAERASLKRNPFHPFATFDTAALAGLALGQTVLSKACQTAGMDFDSTQAHSALYDTERTAVLFCEIVNRWKRLGGWPLPAAEEV", - "output": "magnesium ion binding ; nucleic acid binding ; RNA exonuclease activity, producing 5'-phosphomonoesters ; tRNA processing" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MPKIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCALPYVIGEVVEDRKYALAYTPEKFYDRKQITVKTYHEVIAINDERQTVTVLNRKTNEQFEESYDKLILSPGASANSLGFESDITFTLRNLEDTDAIDQFIKANQVDKVLVIGAGYVSLEVLENLYERGLHPTLIHRSDKINKLMDADMNQPILDELDKREIPYRLNEEIDAINGNEITFKSGKVEHYDMIIEGVGTHPNSKFIESSNIKLDRKGFIPVNDKFETNVPNIYAIGDIATSHYRHVDLPASVPLAWGAHRAASIVAEQIAGNDTIEFKGFLGNNIVKFFDYTFASVGVKPNELKQFDYKMVEVTQGAHANYYPGNSPLHLRVYYDTSNRQILRAAAVGKEGADKRIDVLSMAMMNQLTVDELTEFEVAYAPPYSHPKDLINMIGYKAK", - "output": "CoA-disulfide reductase activity ; flavin adenine dinucleotide binding ; NADP binding ; protein disulfide isomerase activity" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MIQYLQVGKIVNTHGIKGEVKAIPLTDNPRRFNKLKWAYVSKEISNEMPKFDIVSVKHHKNFVILKFSGIDDMNAAEKLKEHFVIIDRKDAVKLPKDTFFICDLIGMNVFDTEEKKLGVLTDVLSTGSNDVYVVKSDNNKEILIPALKSVVKKVCFEDNKMVVDLPQGLIDDEV", - "output": "cytoplasm ; ribosome ; ribosome binding ; ribosomal small subunit biogenesis ; rRNA processing" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MLHIDELTFENEVLQSEKLVLVDFWAPWCGPCRMIGPILEEIAKEFNLKVVQVNTDENPNLATFYGIRSIPTLMLFKKGQRVDTVIGAVPKSILIHTINKYL", - "output": "chloroplast ; protein-disulfide reductase activity" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MLRRGVKIGVLTNNENKFIELKEIAKNFNIELEHLRGEKIEIQSDDLEEISRTAANLAYLIFRRPLIVDDSGLFVQALQNFPGPYTNFVKNTIGLKGILKLLEGIKDRSAYFMTALTFTDGKIIKTFIGIVKGAISEEIRGNLGFGFDPIFIPEGEKRTFAEMSLEEKNRYSHRARAFAKFAEFLESYTEKE", - "output": "cytoplasm ; dITP diphosphatase activity ; ITP diphosphatase activity ; metal ion binding ; nucleoside triphosphate diphosphatase activity ; nucleotide binding ; ribonucleoside triphosphate phosphatase activity ; XTP diphosphatase activity ; nucleoside triphosphate catabolic process ; nucleotide metabolic process ; purine nucleoside triphosphate catabolic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MLSSALKLTKKVCSTKSNGLIRSFSTQTQSRDYAVVDHTYDAIVVGAGGAGLRAALGLTEKGYKTACITKLFPTRSHTVAAQGGINAALGNADQDDWRWHAYDTVKGSDFLGDQDAIHYMCKEAVPTVLELEQYGVPFSRMDDGRIYQRAFGGQSKNFGKGGQATRCCAAADRTGHALLHTLYGQAVKHNTKFFIEYFVTDLIMENGDCRGVVAINLEDGTIHRFRSHATVIATGGYGRAYFSATSAHTCTGDGNAMVIRAGLPCQDLEFVQFHPTGIYGSGCLITEGARGEGGYLLNSSGERFMPRYAPSVADLASRDVVSRSETMEIREGRGVGPEKDHCLLNLTHLSPEIIDERLPGIRETAMIFAGVDVTKEPIPVIPTVHYNMGGIPTNYKGQVITQVDGKDKLVKGLYAAGESACVSVHGANRLGANSLLDIVVFGRAVANEIENTLAKDTPHKPLPPNAGEESIANIDAIRFSNGTRSTAEIRLEMQKIMQRNAAVFRDGQVLKEGVELIDKCARSLINDLKTTDRTMIWNTDLIESLELQNLMTQAVLTMHSAEARKESRGAHAREDYKERDDANWMKHTLSYLDVNTGKVTLNYRPVVSETLDQSEMETIKPFKRVY", - "output": "mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone) ; mitochondrion ; phagocytic vesicle ; electron transfer activity ; flavin adenine dinucleotide binding ; fumarate reductase (menaquinone) ; succinate dehydrogenase (ubiquinone) activity ; defense response to Gram-negative bacterium ; mitochondrial electron transport, succinate to ubiquinone ; mitochondrion organization ; phagocytosis ; positive phototaxis ; tricarboxylic acid cycle" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MKNIEKSEIIISLVDVDKEFGDKKVLDQINLDIKRGDFVTLLGPSGSGKTTILRLIGGFEWTTRGEIKFNGIDIKDVPAHKRDTATIFQDYALFPHLSVRGNIEFGLKLKRIKKKAEEIPDVVWKKFEHLKKKWQDKQKRKIKELKILQAHLEKLLENPQLDIKKRKKLQDKLDDSDFRYSNWENYLTSKSESFKKKYLTRKITKQEINKEITDIIDLVGLTGNENRAISELSGGMKQRVALARSLVIEPEIVLLDEPLSALDTKIRQKMQVFLKKIQQKLGLTFIFVTHDQDEALQLSDKIAIIRNGKIAQYDEPKQIYDYPVNKWVANFIGDSNFFQAKYIKKNQVEILGLKLYTIHDEFIPGQKLDCLIRPEDIDIDLNSGYFKGKVIQNIYKGSYYSLDIKVENTIINVETNDFYDLETQVFLKWDDDAIHLMEMENAEI", - "output": "ATP-binding cassette (ABC) transporter complex ; ABC-type polyamine transporter activity ; ATP binding ; ATP hydrolysis activity" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MTNIRKSHPLAKMINKSFIDLPAPSNISAWWNFGSLLGVCLILQILTGLFLAMHYTADTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGMYYGSYTFSETWNIGILLLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIISALAAVHLLFLHETGSNNPSGVVSDSDKIPFHPYYTIKDILGLLLLILTLMLLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILAIIPLLHTSKQRSMMFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFITIGQLASIFYFSILLILMPIFSTIENHLLKW", - "output": "mitochondrial inner membrane ; respiratory chain complex III ; metal ion binding ; ubiquinol-cytochrome-c reductase activity ; respiratory electron transport chain" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MMPTQRLAEADPQIAKLIREETRRQAEGLELIASENFVSPAVLEALGSTLTNKYAEGYPGKRYYGGCEVVDQVEQLAIDRAKQLFGADHANVQPHAGSQANMAAYFALAKPGDTVLAMSLNFGGHLTHGSPVNFSGKLFKIVPYGLRQSDETIDMDEVARLAREHRPRILMVGASAYSRTLHFDRFAEIANEVGAAMVVDMAHIAGLVAAGLHPSPVPHSEIVTTTTHKTLRGPRGGMILCREAHAKTLNSQIFPGIQGGPLEHVIAAKAVAFGEALRPEFKAYQRRIVENAQVLAEGLKSAGLRLVSGGTDNHLMLVDLRPKKLTGKIAEEALGRAGITVNKNMIPWDPEKPMTTSGIRVGTPALTTRGMGSREMTLVAALIGRVLDAPADEQVLARVRGEVKDLCAHFPMYADRV", - "output": "cytoplasm ; glycine hydroxymethyltransferase activity ; pyridoxal phosphate binding ; glycine biosynthetic process from serine ; tetrahydrofolate interconversion" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MIQKSKIKDLVVFTDENNSKYLNVLNDFLSYNINIIKVFRSIDDTKVMLIDTDYGKLILKVFSPKVKRNERFFKSLLKGDYYERLFEQTQKVRNEGLNTLNDFYLLAERKTLRFVHTYIMIIEYIDGIELCDMPDIDDALKNKIQQSINALHQHGMVSGDPHRGNFIIKNGEVRIIDLSGKRASAQRKAKDRIDLERHYGIKNEIRDLGYYLLVYRKKMRNFMRRLKGKPAR", - "output": "ATP binding ; kinase activity ; carbohydrate phosphorylation ; lipopolysaccharide core region biosynthetic process" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MPSTPSLKVVHELPACTLCVGPLEDAVTAPCGHTFCRLCLPTLSQMGAQSSGKILLCPLCQEEEQAETPMAPVPLGPLGETYCEEHGEKIYFFCENDAEFLCVFCREGPTHQAHTVGFLDEAIQPYRDRLRSRLEALSMERDEIEDVKCREDQKLQVLLTQIENKKHQVEAAFERLQQELEQQRCLLLARLRELEQQIWKERDEYITKVSEEVSRLGAQVKELEEKCQQPASELLQDIRVNQSRCEMKTFVSPEAISPDLVKKIRDFHRKILTLPEMMRMFSENLAHHLEIDSGVITLDPQTASRSLVLSEDRKSVRYTRQKKNLPDSPLRFDGLPAVLGFPGFSSGRHRWQVDLQLGDGGGCTVGVAGEGVRRKGEMGLSAEDGVWAVIISHQQCWASTSPGTDLPLSEIPRYVGVALDYEAGQVTLFNAQTQEPIFTFAASFSGKVFPFFAVWKKGSCLTLKG", - "output": "cytoplasm ; nucleus ; molecular sequestering activity ; protein serine/threonine kinase inhibitor activity ; transcription coactivator activity ; ubiquitin protein ligase activity ; zinc ion binding ; innate immune response ; negative regulation of intracellular transport of viral material ; negative regulation of NIK/NF-kappaB signaling ; positive regulation of NF-kappaB transcription factor activity ; positive regulation of RIG-I signaling pathway ; positive regulation of type I interferon production ; protein ubiquitination ; suppression of viral release by host" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MAAERTQNLQDTFLNHVRKSKTPLTIFLVNGVKLQGVVTWFDNFCVLLRRDGHSQLVYKHAISTIMPGHPVQLFDPTDEVASEKA", - "output": "RNA binding ; regulation of DNA-templated transcription" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MVMTDPIADFLTRIRNANQVKHEVLEVPASNIKKGIAEILKREGFVKNVEVIEDDKQGIIRVFLKYGKNGERVITNLKRISKPGLRVYAKRDDMPKVLNGLGIAIISTSEGLLTDKEARQKNVGGEVVAYVW", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MLEKVKNIIVVLSGKGGVGKSTVSTQLSLALRKNGFKVGLLDIDLCGPSVPYLLGLEGRDIFQCDEGWVPVYTDESQTLAVMSIGFLLKNREDPVIWRGPKKTMMIRQFLTDVRWDELDYLIIDTPPGTSDEHITVMECLKEVGCHGAIIVTTPQEVALDDVRKEITFCKKTGINILGIVENMSGFVCPHCTSCTNIFSSNGGASLANYAQVPHLGTLPIDPRVGVLAGSTTSVLDELPDSTTAEVLTHIVEKLKTIFVS", - "output": "cytoplasm ; 4 iron, 4 sulfur cluster binding ; ATP binding ; ATP-dependent FeS chaperone activity ; metal ion binding ; iron-sulfur cluster assembly" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MASSSASATVAVDKATSDLLLGPDWTTNMEICDSVNSLHWQAKDVVKAVKKRLQHKSSRVQLLALTLLETLVKNCGDYLHHQVAEKNILGEMVKIVKKKADMQVRDKILVMVDSWQQAFGGPEGKYPQYYWAYDELRRSGVEFPRRSPDASPIITPPVSHPPLRQPQGGYGVPPAGYGVHQAGYGVPQAGYGIPQAGYGVPQAGYGIPQVGYGMPSGSSRRLDEAMATEVEGLSLSSIESMRDVMDLLGDMLQAVDPSDREAVKDEVIVDLVERCRSNQKKLMQMLTSTGDDELLGRGLDLNDSLQILLAKHDAIASGSPLPVQASGSPLSVQASKPADSSPKSSEAKDSSSIAGSSSPIPATVSTGKSPIDEEYEEEEDEFAQLARRHSKPPASVTTDPTSLESHNAASNALALALPDPPPPVNTTKEQDMIDLLSITLCTPSTPPAPSSQPSPPPPAGSDQNTHIYPQPQPRFDSYVAPWAQQQQPQQPQAQQGYSQHQQHQQQQGYSQPQHSQQQQGYSQLQQPQPQQGYSQSQPQAQVQMQPSTRPQNPYEYPPPPWASTSANAYYTPRANASASYTDTSALAGRSLQQSNSFPTRAGDPQATSTASNSGVSVGQKPFVPSYRLFEDLDVFGSADGKHNKPANSSNGSQNLSGSQTQQSMIGGRKMI", - "output": "cytoplasm ; early endosome ; early endosome membrane ; multivesicular body ; phosphatidylinositol binding ; ubiquitin binding ; protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MSNPQFRAGFVAIVGRPNVGKSTLTNALIGTKISIVSRKAQTTRHRIHGVLTREHEQFVFVDTPGFQTRHGGAMNRMMNRVVTQALADVDVVVHVVEAGKWSEGDAKLLPLLPKSRRSILVVSKIDALKNRDELFPFVSKLMALHAYDAVVPVSATKGQQLDQLLDEIAAGLPQGDPMFEEDTLTDRPVRFIAAELVREKIFRLVGDELPYGCTVVIEQWEETERGVRIAACVVVERESHRPILLGAGGMHMKRIATEARQDIAKLLDMPVHLEIYIKVRKGWSDREGALRDLGYE", - "output": "cytoplasm ; plasma membrane ; GTP binding ; GTPase activity ; small ribosomal subunit rRNA binding ; ribosomal small subunit biogenesis" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MTWQAYVDNNLLGAGFASAALLGAADGSVWAHSAGFNVAEGKAITALFQKDGAAFATGIHVAGKKYMAIKSDTRSAYGKLGAGGVVCVKTLTCIIVAVYDDKLQPGAAANIAEKLADYLIDNNC", - "output": "actin cytoskeleton ; cell cortex ; extracellular matrix ; actin binding ; actin monomer binding ; myosin I heavy chain binding ; actin nucleation ; cell motility ; exocytosis ; hyperosmotic response ; mitotic cytokinesis ; negative regulation of actin filament polymerization ; negative regulation of phagocytosis ; pinocytosis ; positive regulation of actin filament polymerization ; secretion of lysosomal enzymes ; sequestering of actin monomers ; sorocarp development" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MTDTVVNRWMYPGDGPLQSNDKEQLQAGWSVHPGAQTDRQRKQEELTDEEKEIINRVIARAEKMETMEQERIGRLVDRLETMRKNVAGDGVNRCILCGEQLGMLGSACVVCEDCKKNVCTKCGVETSNNRPHPVWLCKICLEQREVWKRSGAWFFKGFPKQVLPQPMPIKKTKPQQPAGEPATQEQPTPESRHPARAPARGDMEDRRAPGQKPGPDLTSAPGRGSHGPPTRRASEARMSTTTRDSEGWDHGHGGGAGDTSRSPGGEQGLRRANSVQASRPAPASMPSPAPPQPVQPGPPGGSRAAPGPGRFPEQSTEAPPSDPGYPGAVAPAREERTGPTGGFQAAPHTAGPYSQAAPARQPPPAEEEEEEANSYDSDQATTLGALEFSLLYDQDNSNLQCTIIRAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPVWNETLQYHGITEEDMQRKTLRISVCDEDKFGHNEFIGETRFSLKKLKANQRKNFNICLERVIPMKRAGTTGSARGMALYEEEQVERIGDIEERGKILVSLMYSTQQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISVWDYDIGKSNDYIGGCQLGISAKGERLKHWYECLKNKDKKIERWHQLQNENHVSSD", - "output": "cholinergic synapse ; cytosol ; dendritic spine ; extrinsic component of membrane ; extrinsic component of synaptic vesicle membrane ; neuromuscular junction ; neuron projection ; postsynaptic membrane ; presynapse ; protein-containing complex ; secretory granule ; synapse ; synaptic vesicle ; synaptic vesicle membrane ; calcium ion binding ; calcium-dependent phospholipid binding ; inositol 1,4,5 trisphosphate binding ; phosphate ion binding ; phosphatidylinositol-4,5-bisphosphate binding ; phospholipid binding ; protein-containing complex binding ; selenium binding ; small GTPase binding ; zinc ion binding ; brain development ; dendritic spine organization ; exocytosis ; intracellular protein transport ; regulation of calcium ion-dependent exocytosis ; regulation of NMDA receptor activity ; spontaneous neurotransmitter secretion ; synaptic vesicle priming" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MKLLRRAWRRRAALGLGTLALCGAALLYLARCAAEPGDPRAMSGRSPPPPAPARAAAFLAVLVASAPRAAERRSVIRSTWLARRGAPGDVWARFAVGTAGLGAEERRALEREQARHGDLLLLPALRDAYENLTAKVLAMLAWLDEHVAFEFVLKADDDSFARLDALLAELRAREPARRRRLYWGFFSGRGRVKPGGRWREAAWQLCDYYLPYALGGGYVLSADLVHYLRLSRDYLRAWHSEDVSLGAWLAPVDVQREHDPRFDTEYRSRGCSNQYLVTHKQSLEDMLEKHATLAREGRLCKREVQLRLSYVYDWSAPPSQCCQRREGIP", - "output": "Golgi apparatus ; Golgi cisterna membrane ; Golgi medial cisterna ; Golgi membrane ; membrane ; galactosylxylosylprotein 3-beta-galactosyltransferase activity ; UDP-galactosyltransferase activity ; chondroitin sulfate biosynthetic process ; glycosaminoglycan biosynthetic process ; glycosaminoglycan metabolic process ; heparan sulfate proteoglycan biosynthetic process ; protein O-linked glycosylation ; proteoglycan biosynthetic process" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MRPTGRSAQQVRPLKLTRHYTKHAEGSVLVEFGDTKVLCNATVEEGVPRFLKGQGQGWVTAEYGMLPRATHSRNAREAAKGKQGGRTLEIQRLIARSLRAAIDLKVLGEYTITLDCDVLQADGGTRTASITGACVALADALNQMVANGKLKKNPMKGMVAAVSVGIVNGEALCDLEYVEDSAAETDMNVVMTEDGRMIEVQGTAEGEPFSHEELLSLLALARGGIETIVQAQKAALID", - "output": "3'-5'-RNA exonuclease activity ; phosphate-dependent exonuclease activity ; tRNA binding ; rRNA catabolic process ; rRNA processing ; tRNA processing" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MDLLKIKDPSFMKQLDIKELEALAADIRAFLITSTSKSGGHIGPNLGVVELTIALHYTFNSPKDKFIWDVGHQSYVHKILTGRANQFDTLRKHGGLDGFPKRKESIHDVFETGHSSTSLSAACGMVIARDIKKEDFYVIPIIGDGALTGGMAFEALNHIGDMGKDMIVILNDNDMSIAPNVGALHNVLGKLRTSDKFQQTKTNIDKLIRKIPTAGEKLADTAEKTKDSLKHLLVNGTFFEELGFMYLGPIDGHNLEDILTNLEIAKRARGPVILHVVTKKGKGYQPAELDSRGTWHGTGPYKVETGSFIKSVKTAPSWSSVISNELMRLATADERIVAITPAMPVGSKLEKFAKAFPERFFDVGIAEQHATTMAAGLATQGMKPFLAIYSTFLQRAYDQLVHDVCRQKLNVVIGIDRAGLVGADGETHQGIFDISFLNSIPNMIITMPKDEVEARQLMVTAFDYDAGPFAIRYPRGNGLGVELTESNTLIPIGEWETIIQPIDAVIVTFGPTIQLALKAADQLETEGYRVGVINARFIKPLDETLLHQMIKQKIPILTVEESLLKGGFGASVLEFIETNNYTDVAIHRIGLPDEFISHGSVPVILESYGISEAGIELKIKEMLAQSEKLRAKRL", - "output": "1-deoxy-D-xylulose-5-phosphate synthase activity ; magnesium ion binding ; thiamine pyrophosphate binding ; 1-deoxy-D-xylulose 5-phosphate biosynthetic process ; terpenoid biosynthetic process ; thiamine biosynthetic process" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MSLASLSVSPGKGRRVVVGMSGGVDSSVTAWLLKQQGYEVIGLFMKNWEDDDDSEYCSTRQDLLDAASVADLVGVDFEYVNFAAEYKDRVFAEFLREYSAGRTPNPDVLCNAEIKFKAFLDHAMTLGAEHIATGHYARVRAIAGAHGREYQLLKALDGSKDQSYFLHRLNQAQLSRTLFPLGEIHKTEVRRIAHDIGLHNAAKKDSTGICFIGERPFREFLNRYLPTEPGDILTPQGQRVGRHHGLSFYTLGQRKGLGVGGVKGSQRDDGTADAWYVARKDLQHNILYVVQGHDHPWLLSNRLQALDASWVAGRAPELRGYGAKTRYRQADAACVLEQASQGAFELSFSQPQWAVTPGQSAVLYDGDVCLGGGIIA", - "output": "cytoplasm ; ATP binding ; sulfurtransferase activity ; tRNA binding ; tRNA modification" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MNINVDVKQNENDIQVNIAGEIDVYSAPVLREKLVPLAEQGADLRICLKDVSYMDSTGLGVFVGTFKMVKKQGGSLKLENLSERLIRLFDITGLKDIIDISAKSEGGVQ", - "output": "anti-sigma factor antagonist activity" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MEESKTPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLDSLPSSISSVFLPPVDLTDLSSSTRIESRISLTVTRSNPELRKVFDSFVEGGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETVSCEFRELTEPLMLPGCVPVAGKDFLDPAQDRKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEPGLDKPPVYPVGPLVNIGKQEAKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALSLVALKWKAHKKELEQNGNH", - "output": "hydroquinone glucosyltransferase activity ; UDP-glucosyltransferase activity ; UDP-glycosyltransferase activity ; lignin biosynthetic process ; response to toxic substance ; xenobiotic catabolic process ; xenobiotic metabolic process" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MKSALLFTLVVAAVHAQSPQVISPAPRRESNEIDCPEYCLDVYDPVGDGEGNTYSNECYMKRAKCHNETTPPAWKDLVLITGSSTGEQPPSKKCSTVCPDVELPVCGSNRVRYGNPCELRIAACEHPELNIVEDSGKACVGSKVTPQEG", - "output": "apoplast ; serine-type endopeptidase inhibitor activity ; effector-mediated suppression of host innate immune response ; negative regulation of peptidase activity" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MARDKNKENDGSWKKFLWDPEKKEFMGRTGSSWFKILLFYLVFYGCLAGIFIGTIQVLLLTLSIYEPKYQDRVAPPGLTQVPRAVKAEISFTVGNPSTYEDYVTSLSNFLNQYNSSKQDNLALFEDCGDKPKGYIDRGAISPDHGTKRSCQFKREWLGECSGLNDTTFGFNEGKPCLIVKLNRIVGFKPRPTNVDVPAAVANLTENIIPLHCKGKRPEDDNNLLDIQYYGMGGYPGFPLNYYPYYGRLLQPNYLQPLIAVQFTNITLDTEVRIECRAYGENLLLSEKDRFQGRFDIKIEMKSS", - "output": "sodium:potassium-exchanging ATPase complex ; potassium ion transport ; sodium ion transport" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MIASVRGEVLEIALDHAVIESAGVGYRVNATPATLGGLQRGTEARLVTAMIVREDSMTLYGFPDSESKELFGLLQTVSGVGPRLAMATLAVLEPEALRSALAEGNVTALTRVPGIGKRGAERMVVELRDKVDAVGSTSGAVPLGAGGGGSVRDQIVEALVGLGFPAKQAEQATDSVLAEAPESTTSSALRSALSLLGKTR", - "output": "cytoplasm ; Holliday junction helicase complex ; ATP binding ; DNA binding ; four-way junction helicase activity ; DNA recombination ; DNA repair ; SOS response" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MPHVEAITLTRDRRGPGLGAVRLWLYAVAALIIAMVVVGGATRLTESGLSITEWKPVTGALPPLSQADWQAEFDKYQAIPQYEILNKGMGLEAFKRIYWWEWGHRLLGRLIGFAFLLPFLWFAWRGVLRGRLLAKCLVLFLLGGLQGAVGWWMVASGLTARVSVSQYRLAIHLTLACIILSAIVAVARSLSPEPRQVVGGRLRATAWALVALVLVQIFAGGLVAGLDAGMAFNTWPLMDGHLIPPAAQLAAADPFWRNLFENALTVQFNHRMIAYALWTLTLLHALDARRAGGAVAQRAWVLFALVTAQASLGILTLIHQVPIDLALAHQFGATLVLVVATLHLGGLSGQVEPATPKLRLVKG", - "output": "plasma membrane ; metal ion binding ; oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor ; heme A biosynthetic process" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MSKPVKIGPWGGNGGSERDVQPKPIRMVSMTVSSGAIVDAIAFTYVGTDNVQHSSGIKWGGTGGTEDTINLDATNYVTEISGTVGKFGTDDIVTSLKIITSKGVTRTYGSGTGIPFRVPVLDGGKIAGFFGRAGAFLDAIGFYITP", - "output": "apoplast ; mannose binding" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MNIEALKVFKESGEKITCLTAYDASFASVFDACGIDIILVGDSLGNVIQGDKNTLDVSMSDMIYHMQAVAKGTQNALRIADMPYQSYTYAEQTLTNAKRLIMAGAQMVKLEGGCEHEASFRILQGNDISVCGHLGLQPQSVVEIDGYRVQGRGKQGANKIIKNALALASWGVKVIVLECVPAELAKQVSQSVSIPIIGIGAGLDCDGQVLVSYDMLGVHVRHVPRFVKNFLTDNGDVKSAVNAFIKAVKDKSFPSKKYSY", - "output": "cytoplasm ; 3-methyl-2-oxobutanoate hydroxymethyltransferase activity ; metal ion binding ; pantothenate biosynthetic process" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MRRIGAHVSIAGGIENAPMRAREIGATAFAMFTKNQRQWNAPPLTTQSIDAFKNNCAECGYHARHILPHDSYLINLGSPDPAKLERSRKAFTDEMQRVEALGLSLLNFHPGSHLNETGIDNCLNTIAESVNIALDNSSGVTAVLENTAGQGSNLGHTFEQLAAIIDQIEDKTRVGVCLDTCHLFAAGYDLRTSEAVEATFNEFDSIVSLSYLRGMHLNDAKLDLGSKRDRHESIGSGFIGNDGFAAIIQHPACDEIPLILETPNPDIWNREIEMLYQMEGDKR", - "output": "deoxyribonuclease IV (phage-T4-induced) activity ; DNA binding ; zinc ion binding ; DNA repair" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MSKEKFERVKPHVNVGTIGHVDHGKTTLTAAICTTLAKVYGGAARDFASIDNAPEERERGITISTSHVEYDTPARHYAHVDCPGHADYVKNMITGAAQMDGGILVVAATDGPMPQTREHILLGRQVGIPYIIVFMNKCDMVDDEELLELVEMEVRELLSEYDFPGDDLPVIQGSALGALNGEEQWEAKIIELAEALDTYIPEPERAIDLPFLMPIEDVFSIQGRGTVVTGRIERGILKVGDEVAIVGIKDTTTTTCTGVEMFRKLLDEGRAGENVGALLRGTKRDEVERGQVLAKPGSITPHTKFESEVYVLSKDEGGRHTPFFKGYRPQFYFRTTDVTGDISLPEGVEMVMPGDNIQMVVELISPIAMDEGLRFAIREGGRTVGAGVVAKIFA", - "output": "cytoplasm ; GTP binding ; GTPase activity ; guanosine tetraphosphate binding ; translation elongation factor activity" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MMSYYMDTTIGSTGPYPLARPGVMQGASSCCEDPWMPCRLQSACCPPRSCCPPWDEAAIQEVPTGLEHYSTDMECADVPLLTPSSKEMMSQALKATFSGFAKEQQRLGIPKDPQQWTETHVRDWVMWAVNEFSLKGVDFQKFCMNGAALCALGKECFLELAPDFVGDILWEHLEILQKEEAKPYPANGVNAAYPESRYTSDYFISYGIEHAQCVPPSEFSEPSFITESYQTLHPISSEELLSLKYENDYPSVILRDPVQTDSLQTDYFTIKQEVVTPDNMCMGRASRGKLGGQDSFESIESYDSCDRLTQSWSSQSSFQSLQRVPSYDSFDSEDYPAALPNHKPKGTFKDYVRDRADMNKDKPVIPAAALAGYTGSGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCDLQSLLGYTPEELHAMLDVKPDADE", - "output": "cytoplasm ; nucleus ; DNA-binding transcription factor activity, RNA polymerase II-specific ; sequence-specific DNA binding ; positive regulation of endothelial cell migration ; regulation of angiogenesis ; regulation of transcription by RNA polymerase II" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MARNIKVEELLQTPIEKQQIELVERKGIGHPDSISDGLAEAVSRALCREYITKCGAVLHHNTDETQIVAGRSSPKFGGGEVLQPIYMLLVGRATKEFEGAELATESVALKAARNYLRNTMVNMDLERDVIIDCKLGTGSSDLRDVFKRDRVPMANDTSFGVGHAPFSELENIVYNTERQLLTDLKSRMPAIGEDMKIMGLRDGDDISLTICSGMIGRYVDDLDSYINMTQEMKTYTEELAARYTERNVNVFVNTADNLKASCVFLTVTGTSAEMGDDGSVGRGNRCNGLITPNRPMSMEATSGKNPINHIGKIYNLLSTQMARDIVKQVPDVQDVYIRLLSQIGKPIDQPLVASAQIIPKEGTSFANVKSEAEVVIDDWLSNVTKITEMVIRGELNTF", - "output": "ATP binding ; magnesium ion binding ; methionine adenosyltransferase activity ; one-carbon metabolic process ; S-adenosylmethionine biosynthetic process" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MITELAAMLKERFGIVFNDPDLLAEAFTQASYVNEHQDQQLKYYERVEFLGDAVLELVVSEYLYKRYKDMPQGKLTRLRAAMVCEESFASFARECDFPQYIRLGKGEQKAHAWERDSLLCDIFESFVGALYLDQGREPVLKFVHQVIFPKLDEGRFDGVFDYKTTLQEYLQRDGDVAIDYQLIEQDGPANERSYEIAVLADGQKIGEGWGHSKKEAEQSAARQAYSQLQQK", - "output": "cytoplasm ; metal ion binding ; ribonuclease III activity ; rRNA binding ; mRNA processing ; rRNA processing ; tRNA processing" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MQSPDGQETGRPAAILIAGPTASGKSALGLRIARAFGGTVINTDSMQVYADLRVLSARPTAEEEGLAPHRLYGSIDGAVNFSVGHFQRQAAALLSEMDAGSLPVFVGGTGLYFRSLDEGISDLPEVPDAVRQRIRIEADGQPTETLHAALALRDPESAERLRPSDRMRVMRALEIHAATGRSIGSFHEARVPGPLAGKPLLKLFLATEREALRQRIDARFVTMMEQGALDEVAALRERRLDPLLPVMRAHGVPGLIAHLDGTISRQEAIQRGQGDTRRYAKRQFTWFRHQMGEAWHWTTPEAAWSLVQARLSAPAGR", - "output": "ATP binding ; tRNA dimethylallyltransferase activity ; tRNA processing" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MPHYRRILLKLSGEALLGDGQYGIAANTLDRIADELAEINAMGVEVAVVIGGGNIFRGAGLAASGMDRVTADHMGMLATVMNALAIQDALERRSVFCRVMSAIKINQVCEDYIRRRAVRHLEKGRVVIFAAGTGNPFFTTDSAASLRAVEVGAELLLKGTKVDGVYSSDPVRDPEAKRYQQLTYDEVLSKRLEVMDATAIVLCRDQAMRIMVFDITSPGTMVAAARGEPVGTVVDPGLPSAQEESS", - "output": "cytoplasm ; ATP binding ; UMP kinase activity ; 'de novo' CTP biosynthetic process ; phosphorylation" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MAFANLRKVLISDSLDPCCRKILQDGGLQVVEKQNLSKEELIAELQDCEGLIVRSATKVTADVINAAEKLQVVGRAGTGVDNVDLEAATRKGVLVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWERKKFMGTELNGKTLGILGLGRIGREVATRMQSFGMKTIGYDPIISPEVSASFGVQQLPLEEIWPLCDFITVHTPLLPSTTGLLNDNTFAQCKKGVRVVNCARGGIVDEGALLRALQSGQCAGAALDVFTEEPPRDRALVDHENVISCPHLGASTKEAQSRCGEEIAVQFVDMVKGKSLAGVVNAQALTSAFSPHTKPWIGLAEALGTLMRAWAGSPKGTIQVITQGTSLKNAGNCLSPAVIVGLLKEASKQADVNLVNAKLLVKEAGLDVTTSHSPAAPGEQGFGECLLAVALAGAPYQAVGLVQGTTPVLQGLNGAVFRPEVPLRRGLPLLLFRTQTSDPAMLPTMIGLLAEAGVRLLSYQTSLVSDGETWHVMGISSLLPSLEAWKPHVTEAFQFHF", - "output": "L-malate dehydrogenase activity ; NAD binding ; phosphoglycerate dehydrogenase activity ; L-serine biosynthetic process" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MAIISSNIGDNDFSLRKKELRLVDSKIIPEEKRKNNLNLARPITFQEFIGQEKLKSSLRIAIDASIYRKEPLEHTLLYGQPGLGKTTLAFLIAKEMNTKCRIATAPAIERPRDIVGLLLGLKEGEVLFIDEIHRLNRLTEELLYSAMEDFRLDLTMGANRGARCRTINLPRFTLVGATTKLASISAPLRDRFGISQKIEFYTCDELKQIIDNFSRLISFNVDDEASSHLAKISRGTPRIALRLLRRVRDYAQVVKKTNVISVNLIKKALNSYQIDEKGLDYVDRQYLSFLNQNKNIPTGLDSIAAGLGDDSSMLEFVVEPYLIQIGFLTRTPRGRLLTALGKKYIDSKNDNF", - "output": "cytoplasm ; ATP binding ; ATP hydrolysis activity ; DNA binding ; four-way junction helicase activity ; DNA recombination ; DNA repair ; SOS response" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MNIEQIFKKPLKRNINGVVKAEQTDDASAYIELDEYVITRELENHLRHFFESYVPATGPERIRMENKIGVWVSGFFGSGKSHFIKILSYLLSNRKVTHNGTERNAYSFFEEKIKDALFLADINKAVHYPTEVILFNIDSRANVDDKEDAILKVFLKVFNERIGYCADFPHIAHLERELDKRGQYETFKAAFADINGSRWEDERDAYYFISDDMAQALSQATQQSLEASRQWVEQLDKNFPLDINNFCQWVKEWLDDNGKNILFMVDEVGQFIGKNTQMMLKLQTITENLGVICGGRAWVIVTSQADINAAIGGMSSRDGQDFSKIQGRFSTRLQLSSSNTSEVIQKRLLVKTDEAKAALAKVWQEKGDILRNQLAFDTTTTTALRPFTSEEEFVDNYPFVPWHYQILQKVFESIRTKGAAGKQLAMGERSQLEAFQTAAQQISAQGLDSLVPFWRFYAAIESFLEPAVSRTITQACQNGILDEFDGNLLKTLFLIRYVETLKSTLDNLVTLSIDRIDADKVELRRRVEKSLNTLERLMLIARVEDKYVFLTNEEKEIENEIRNVDVDFSAINKKLASIIFDDILKSRKYRYPANKQDFDISRFLNGHPLDGAVLNDLVVKILTPKDPTYSFYNSDATCRPYTSEGDGCILIRLPEEGRTWSDIDLVVQTEKFLKDNAGQRPEQATLLSEKARENSNREKLLRVQLESLLAEADVWAIGERLPKKSSTPSNIVDEACRYVIENTFGKLKMLRPFNGDISREIHALLTVENDTELDLGNLEESNPDAMREVETWISMNIEYNKPVYLRDILNHFARRPYGWPEDEVKLLVARLACKGKFSFSQQNNNVERKQAWELFNNSRRHSELRLHKVRRHDEAQVRKAAQTMADIAQQPFNEREEPALVEHIRQVFEEWKQELNVFRAKAEGGNNPGKNEIESGLRLLNAILNEKEDFALIEKVSSLKDELLDFSEDREDLVDFYRKQFATWQKLGAALNGSFKSNRSALEKDAAAVKALGELESIWQMPEPYKHLNRITLLIEQVQNVNHQLVEQHRQHALERIDARIEESRQRLLEAHATSELQNSVLLPMQKARKRAEVSQSIPEILAEQQETKALQMDADKKINLWIDELRKKQEAQLRAANEAKRAAESEQTYVVVEKPVIQPVPKKTHLVNVASEMRNATGGEVLETTEQVEKALDTLRTTLLAAIKAGDRIRLQ", - "output": "defense response to virus" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MTDASHPTAADDLGALSTLFRSEQGGHERVLLCQDRESGLKAVIALHSTALGPALGGTRFHAYASDEEAVLDALNLARGMSYKNALAGLPHGGGKAVIIGSPAPVSEGGLKSEALLRAYGRFVASLDGRYVTACDVGTYVADMDVVARECRWTTGRSPENGGAGDSSVLTAFGVFQGMRASAQALWGEPTLRGRTVGVAGVGKVGHHLVDHLVEDGARVVVTDVRPESVERVRARHPRVVAVPDTESLIRADLDVYAPCALGGALNDDTVPALTARVVCGAANNQLAHPGVEKDLAGRGILYAPDYVVNAGGVIQVADELLGFDFDRAKAKAAQIFDTTLAIFDRARTDGVPPAVAADRIAEQRMAEARTV", - "output": "cytoplasm ; valine dehydrogenase (NAD) activity ; valine catabolic process" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MKFVDEAFVRVEAGNGGHGCLSFRREKFIPRGGPDGGDGGDGGSVYFVADKSVNTLVEFRYQRLLRAQNGQPGMGRLRSGKKGEDLIVPVPLGTTVYDKETSELIGDLIEAGDKLCVARGGRHGLGNTHFKSSTNRAPRRTTSGEEGEARELKLELKLLADVGLLGLPNAGKSTFIHAVSKATPKIADYPFTTLYPHLGVVRVEEYRSFVIADIPGLIEGASEGAGLGVQFLKHLERTQLLLHIVDIAPLDGSDPVQSIQAIISELEQFSQNLSQKPRWLVFNKIDLLAPDVAQARCQEIINRLNWKGPVYKISAIKRQGTELLCYDLMSFLETNQRSI", - "output": "cytoplasm ; GTP binding ; GTPase activity ; magnesium ion binding ; ribosome biogenesis" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MSSKEQKTPEGQAPEEIIMDQHEEIEAVEPEASAEQVDPRDEKIANLEAQLAEAQTRERDGILRVKAEMENLRRRTELDIEKAHKFALEKFINELLPVIDSLDRALEVADKANPDMSAMVEGIELTLKSMLDVVRKFGVEVIAETNVPLDPNVHQAIAMVESDDVAPGNVLGIMQKGYTLNGRTIRAAMVTVAKAKA", - "output": "cytoplasm ; adenyl-nucleotide exchange factor activity ; protein homodimerization activity ; protein-folding chaperone binding ; protein folding" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MAGQKIRIRLKAYDHEAIDASARKIVETVVRTGASVVGPVPLPTEKNVYCVIRSPHKYKDSREHFEMRTHKRLIDILDPTPKTVDALMRIDLPASVDVNIQ", - "output": "ribonucleoprotein complex ; ribosome ; structural constituent of ribosome ; tRNA binding ; translation" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MKIGSHVSLSGKKMLLGASEEAASYGATTMMVYTGAPQNTRRKPISDLRIPEALLHMEENGIEEIVVHAPYIINLGNTTKPETFELAVSFLGEEIRRAEALEKAKHIVLHPGAHVGAGEEVGIKRIIEGLNEVLTGDEKVKIALETMAGKGSEIGKTFEEIAAIIAGVTHNDRLSVCLDTCHVHDAGYDLIHDLDGVLESFDRIVGINRLGVIHVNDSKNIRGAKKDRHENIGFGEIGFDPLHRIVHHRDLAHLPKILETPYIGLDPRKKVAPYREEIAMLRSGNFDAEWRLPLIGTSI", - "output": "deoxyribonuclease IV (phage-T4-induced) activity ; DNA binding ; zinc ion binding ; DNA repair" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MDLAVGPGAAGPSNVPAFLTKLWTLVSDPDTDALICWSPSGNSFHVFDQGQFAKEVLPKYFKHNNMASFVRQLNMYGFRKVVHIEQGGLVKPERDDTEFQHPCFLRGQEQLLENIKRKVTSVSTLKSEDIKIRQDSVTRLLTDVQLMKGKQECMDSKLLAMKHENEALWREVASLRQKHAQQQKVVNKLIQFLISLVQSNRILGVKRKIPLMLSDSNSAHSVPKYGRQYSLEHVHGPGPYSAPSPAYSSSSLYSSDAVTSSGPIISDITELAPTSPLASPGRSIDERPLSSSTLVRVKQEPPSPPHSPRVLEASPGRPSSMDTPLSPTAFIDSILRESEPTPAASNTAPMDTTGAQAPALPTPSTPEKCLSVACLDKNELSDHLDAMDSNLDNLQTMLTSHGFSVDTSALLDLFSPSVTMPDMSLPDLDSSLASIQELLSPQEPPRPIEAENSNPDSGKQLVHYTAQPLFLLDPDAVDTGSSELPVLFELGESSYFSEGDDYTDDPTISLLTGTEPHKAKDPTVS", - "output": "centrosome ; cytoplasm ; cytosol ; euchromatin ; heterochromatin ; kinetochore ; mitotic spindle pole ; nuclear stress granule ; nucleoplasm ; nucleus ; perinuclear region of cytoplasm ; PML body ; pronucleus ; protein folding chaperone complex ; protein-containing complex ; ribonucleoprotein complex ; chromatin binding ; chromatin DNA binding ; DNA binding ; DNA-binding transcription activator activity, RNA polymerase II-specific ; DNA-binding transcription factor activity ; DNA-binding transcription factor activity, RNA polymerase II-specific ; DNA-binding transcription repressor activity, RNA polymerase II-specific ; general transcription initiation factor binding ; heat shock protein binding ; Hsp90 protein binding ; identical protein binding ; promoter-specific chromatin binding ; protein heterodimerization activity ; protein kinase binding ; protein self-association ; RNA polymerase II cis-regulatory region sequence-specific DNA binding ; RNA polymerase II intronic transcription regulatory region sequence-specific DNA binding ; sequence-specific DNA binding ; sequence-specific double-stranded DNA binding ; sequence-specific single stranded DNA binding ; STAT family protein binding ; transcription cis-regulatory region binding ; translation elongation factor binding ; cell population proliferation ; cellular response to amino acid stimulus ; cellular response to angiotensin ; cellular response to cadmium ion ; cellular response to copper ion ; cellular response to diamide ; cellular response to estradiol stimulus ; cellular response to gamma radiation ; cellular response to heat ; cellular response to hydrogen peroxide ; cellular response to organic cyclic compound ; cellular response to radiation ; cellular response to sodium arsenite ; cellular response to unfolded protein ; defense response ; DNA repair ; embryonic placenta development ; embryonic process involved in female pregnancy ; epithelial cell proliferation ; female meiotic nuclear division ; in utero embryonic development ; MAPK cascade ; mRNA processing ; mRNA transcription ; mRNA transport ; negative regulation of cardiac muscle cell apoptotic process ; negative regulation of double-strand break repair via nonhomologous end joining ; negative regulation of epithelial cell proliferation ; negative regulation of gene expression ; negative regulation of inclusion body assembly ; negative regulation of neuron death ; negative regulation of protein-containing complex assembly ; negative regulation of transcription by RNA polymerase II ; negative regulation of tumor necrosis factor production ; positive regulation of apoptotic DNA fragmentation ; positive regulation of cold-induced thermogenesis ; positive regulation of cysteine-type endopeptidase activity involved in apoptotic process ; positive regulation of DNA-binding transcription factor activity ; positive regulation of gene expression ; positive regulation of inclusion body assembly ; positive regulation of macrophage differentiation ; positive regulation of microtubule binding ; positive regulation of mitotic cell cycle ; positive regulation of mRNA polyadenylation ; positive regulation of multicellular organism growth ; positive regulation of transcription by RNA polymerase II ; positive regulation of tyrosine phosphorylation of STAT protein ; protein phosphorylation ; protein-containing complex assembly ; regulation of cellular response to heat ; regulation of transcription by RNA polymerase II ; response to estradiol ; response to heat ; response to lipopolysaccharide ; response to testosterone ; spermatogenesis" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MPRSLKKGPFIDLHLLKKVEKAVESGDKKPIR", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MSDVAVAETPAVKTPTKAPKANATKVPKVKTAAAHPPFINMVTAAISSLKERKGSSKIAILKYITANYKLGDQVKKINSNLRSALKKGVASKALVQTVGTGATGRFRVAEKTAATAKKPTVKKAATGEKVKKTVVKKTVAKKTGDKVKKAKSPKKIAKPAAKKATKSPSKKVAPKKAAAKPAKKTAALKA", - "output": "nucleosome ; nucleus ; double-stranded DNA binding ; nucleosomal DNA binding ; structural constituent of chromatin ; chromosome condensation ; negative regulation of DNA recombination ; nucleosome assembly" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MKLIHDVQEMQQTVLGLKRQGKRIAFVPTMGFLHEGHASLMREGRTRGDVLVLSIFVNPTQFGINEDLASYPRNLEGDCALAESCGVDLVFAPTAAGMYPPGFQTTVALGPLTKPLCGASRPGHFDGVAVVVTKLFGIVQPDCALFGKKDFQQLAIIRQMTLDLNLPVEIIGMPIVREPDGLAMSSRNSYLSVEQRQQALCLHRAILKVRELFKGGETSVDRLLGEARMIITAVPEASVDYLELRDSTTLEPVATAAADSLFALAVKIGSTRLIDNTVLGDTP", - "output": "cytoplasm ; ATP binding ; pantoate-beta-alanine ligase activity ; pantothenate biosynthetic process" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MRSKNDTILKAIKGESTSHTPVWFMRQAGRSQPEYRKLKEKYSLFEITHQPELCAYVTHLPVDNYQTDAAVLYKDIMTPLKPIGVDVEIKSGIGPVISNPIQTVKDVERLSQIDPKRDVPYVLDTIKLLTEEKLNVPLIGFTGAPFTLASYMIEGGPSKNYNFTKAMMYRDEETWFALMNHLVDISIDYVVAQVEAGAEIIQIFDSWVGALNVKDYRYYIKPAMNKLISGIKAYYDVPIILFGVGASHLINEWNDLPIDVLGLDWRTTIKQADKMGVNKAIQGNLDPSVLLAPWDVIESRLKDILNQGLNRGKHIFNLGHGVFPEVKPETLRKVTEFVHNYTAK", - "output": "cytoplasm ; uroporphyrinogen decarboxylase activity ; protoporphyrinogen IX biosynthetic process" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MTTNDLFSIYAFSNMYDIFPRKYSQKELEEYHRKNPLFFSYTIFPVIKHRWSKAYICFQNNVYMLNIELDTSKPYDRVPIQHLIDIRPISTDIKKEIYKISDKTFITFECYSYLKCKGYNSIYDITLDDKRGLLSAGNILSIFSSNKQMPEKSSIGILKNPKPFTVIKFKSLSLITQLQIFELLRKRKQIVVTGSTGIGKTSQLPKVIMWYNYLFGGWDNLDRVRFDYISRPIVLSLPRVALVKSNGINFLQSLGFSDFEGSPVELRYGGKTEHTTRQHDGIVLSTNKLTSYSLSNYNIIIVDEIHEHDRIADIIISVLRKNIDTIHSLVLMSATLEDDRDRLQEFLPDVEFYHIEGPVLYSIKEIYVKNKYSYDSKAYTEEEKKNISTTLNWCRPRNGMCGILFLASVSQCISYKKYLEKSNSDMDFIIIHGKIPDITEVLNAVQRPGRERPCILVSTPYLESSITIRTATHVYDTGRVYVPKPFGGDQLFISKSMMTQRKGRVGRVSKGIYVYFYDMCLLKPIKSIDHEFLYEYIVYAKKFKLSLPNDLLVIPSDKDMLKKSEEYIKSFNISFDRLFEIYVNYFVNMVEYVKIYNKGGKKAENLDMFERNDILTGETLKDIKNLQLLVKINTTTRRKKMYCYKGEILFGPYMNTVIRLSSKQLYRNYVYMLTERSFTLYR", - "output": "virion component ; ATP binding ; ATP hydrolysis activity ; nucleic acid binding ; RNA helicase activity" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MRGELNIPALSRFGKSISASLHHQNGSSRDDNDSNPYENRSSNSGLNRRNSVFGLPSSGLSSRLSKPSLSSINNSNNSSSNTGGNVLPNPALTPVRNMSNKPPLTWSPSSANLFGTSKVTSIIGNNVSDVVPPVIKKALASSHGGGMSLSIVLLEPVLYLAGFDLNECQIENPALLRGALVLRVAKPANIRGISLSFTGRSRTEWPEGIPVKGHDTYEDKVIISHNWKFYEPTMKDADAPQHGADVARLVGEQLPLPSSAAASLRGYSVFAPGEYTYNFDLAIPNCFPESVEAKMGWVRYFLEATVERFGTFKSNLNGRTPVQLVRTPSPASLSSSELINISRDWDERLHYELQVSGKSFRLGEVVPITFRFLLLDKVRLYKLSISVVESSEYWCRSRKFHRVDPKRRVLLAERSAKHQNTDNLFETPDEGDGLSSAVFNFNVALPTCLVKERDRLTFDTTYKYIKVRHRLKALLVLSIENTENPEKRKYFEINIETPVRILSCRCVKDSTLLPPYESSSQGDNQVLLPCPCRLATTHVEPTEVTAFTTQSVLASSAPSAGRPAAAQISRPAQLFRIPSTNPPPFDGDVCPPACNTPPPNYDELFDVLSSISIQDCETDRANDDTILNNRVRRSGTIREEAPHRSLSRTVSRSFEIPR", - "output": "cell division site ; cell tip ; cytoplasm ; cytosol ; calcium ion binding ; protein-macromolecule adaptor activity ; ubiquitin protein ligase binding ; clathrin-dependent endocytosis ; ubiquitin-dependent endocytosis" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MAEENQTPATATEEQQAVLQIQRIYVKDISFEAPNLPHVFQQEWKPKLNFDLSTEAKQLGEDLYEVVLNISVETTLEDSGDLAFLCEVKQAGVFTISGLEDMQMAHCLTSQCPNMLFPYARELVSNLVNRGTFPALNLSPVNFDALFMEFLQRQEQESQNAESSTEVQH", - "output": "cytoplasm ; unfolded protein binding ; protein folding ; protein tetramerization ; protein transport" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MFRYEAKVFKELVDSVSKILDEGLFIITGEGLRLRGMDPARVALVDIEIPSSSFFDFYMAGDVERVELGVNMETLKGVVARAKKGDQLEVRVREDKVLFIVESVVLRRYLLPNLEVIVDVPEDISLEFDATATVIADVVKKTLRDVELVGDIVEFDAGEDYLSIRSVGPERRRVETRLTRESPALIDLEVKEPATSRYDVGYLKRMLGVAKIAESIELSFSTDKPLKMVFKSPDGSRVTYLLAPSTG", - "output": "DNA binding ; DNA polymerase processivity factor activity ; DNA replication ; regulation of DNA replication" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MHDTEFETRAAELIEAGRFIDGRGWVPATSGNFSARLGDGRIAITVSGRHKGRLRPEDIMLVDAAGRSLDGRKPSAETLLHTGIYRRYPEAHAVLHPHSPASTLLSRLVSGAVILEDYELLKALAGIDTHATRIVVPVFPNDQDIPRLALKIEEYLVRHDGVHAYIIAGHGFYTWGKSVADALRHVEALEYLFDLETRMHGVKR", - "output": "cytoplasm ; methylthioribulose 1-phosphate dehydratase activity ; zinc ion binding ; L-methionine salvage from methylthioadenosine ; L-methionine salvage from S-adenosylmethionine ; monosaccharide metabolic process" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MTDLTEKNTALEEEKIESAVENQQKSIWKEIFAQGIWKNNPAVVQLLGLCPLLAVSSTATNALGLGLATMLVLTCTNTVISLFRQYIPKEIRIPIYVMIIATTVTAVQLLMNAYTYTLYQSLGIFIPLIVTNCIIIGRAEAFASKNSLLHSIWDGFSMGLGMALSLTILGALREIIGQGTIFEGIENLFGEQAKFLTHHIYHTDSSFLLFILPPGAFIGLGLLLAIKNRIDNVKK", - "output": "plasma membrane ; electron transport chain" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDETKDLYLFINSPGGWVIPGVAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPHARVMIHQPASSFYEAQTGEFVLEAEELLKLRETLTRVYVQRTGKPLWVVSEDMERDVFMSATEAQAYGIVDLVAVE", - "output": "chloroplast stroma ; ATP-dependent peptidase activity ; serine-type endopeptidase activity ; proteolysis" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MQVRTPAIICAMRAHGEHGAIVRALTPDHGLLAGYVRGGRSRRLRPVLVAGNLVEAEFRARTAEQLPGLTVELSHSRAGLLAEPLAAAAIDWLSSLTAASLAEGQPHARLYEALDAVLAAIEYAPSARGWAAAAVRYELMLMADLGYALDLSACAATGARDDLAYVSPKSGGAVSRAAGEPYAARLLPLPAFLVDPSADSDWSDIVDGMRLTGHFLARDILVDRRADALDARQRLVDRIGRLA", - "output": "DNA recombination ; DNA repair" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MARFRGSITKVSRRLGIALAPKAEKYLERRPFPPGQHGQGRKGKISEYALQLREKQKMKYLYGILEKQFRNYYKKAVAQRGVTGDNLVKLLERRLDNIVFRAGFSPSRAGARQLVSHGHVTVNGKKVDIPSYLVSPADVMEFRQKSKNMSAVTDSLNKTPESRIPAWIQVDKAHQKAVFLSVPERADIQEEFNEQLVVELYSK", - "output": "small ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MNSGIDLEMSFTQGVQNLGLSHELAHLLWIPLPMLLVLVSAVIGVLVTVWLERKISAAAQQRIGPEYAGALGILQPMADGLKLLVKEDIIPARADSVLFTVGPILVLVPVILSWLIVPFGQNLLISNVGIGIFLWIALSSIQPIGLLMSGYSSNNKYSLLGGLRAAAQSISYEIPLALAVLAIVMMSNSLSTVDIVEQQNTAGLLSWNIWRQPVGFIIFWICALAECERLPFDLPEAEEELVAGYQTEYSGMKFALFYLAGYINLVLSALLVSVLYLGGWGFPISIDWFSSLIGLSIDNPLVQIIAASLGIVMTILKAYLLVFLAILLRWTTPRVRIDQLLDLGWKFLLPISLVNLLVTASLKLAFPITFGG", - "output": "plasma membrane-derived thylakoid membrane ; oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor ; quinone binding ; photosynthesis, light reaction" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MASVNVDFEQAGELKIGQVGIANLRVRTLDVPRLVQEMRERVSRAPKLFGRAAVILDFGGLSQVPDLATAKALLDGLRDAGVLPVALAYGTSEIDLLSQQLGVPLLAKFRAQYEPTAVSPPPPPPPPARAEPAPPAARPAPGRMQRTAVRSGQQLYAENCDLTVLSTVGAGAEVIADGSIHIYGTLRGRALAGAQGNPDARIFCRDFHAELVAIAGHYKVLDDVPMDLRGKAVQVWLEQDQIKIAALD", - "output": "cell morphogenesis ; division septum assembly ; regulation of cell division ; regulation of cell septum assembly" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MSWIEKILPKAKTTQKSSIPEGVWSKCSSCNAVLYKAELERQISVCPKCDHHMRISARKRIDSFLDHDNRMELGEEFEAQDILKFKDSKRYKDRLSAAQKNTGEKDALVVMKGELHGMPVVVAAFEFAFLGGSMASVVGARFVKGVEYCLEHNLPFICFSASGGARMQEALFSLMQMAKTSAALAKMSEKGLPYVSVLTDPTMGGVSASLAMLGDINVAEPKALIGFAGPRVIEQTVREKLPEGFQRSEFLLEKGAIDMIIDRREMKITLARMLGKFMGQTSVVS", - "output": "acetyl-CoA carboxylase complex ; acetyl-CoA carboxylase activity ; ATP binding ; carboxyl- or carbamoyltransferase activity ; zinc ion binding ; fatty acid biosynthetic process ; malonyl-CoA biosynthetic process" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MFDFQHQLKILPDKPGVYIMKNSLGEVIYVGKAKVLKNRVRQYFQNSKNHSEKVRAMVKNIAEFEYIVTDSEMEALILECNLIKKYSPRYNIALKDDKFYPFIKITTNEDFPRVYVTRNFAKDGNRYFGPYTNGTAVYEVMGLIKKLFPLRTCKKAIVEGGEPTRACLNYHINLCKAPCAGYISKAEYWEMIDEIINILNGTDTSIIKKLKLEMEKAAEELEFEKAAKIRDRILAIELISEKQKMFTVKEGDEDFIDLYTDEKDGCAQVFFVREGKVTGREHFMIENIGDDPVKEVISSFIASFYGGTAQIPKTIYVPEEIEDQELIEKFLTEKRGSKVWIKVPKKGDKKNLLDMVRNNAKIMLDQFKEKMVEEKELNKSALTELADVLGLDSLPVRIEAYDISNIQGVDSVGTMVVFENGKAKNSDYRRFKIKSVKGPNDYESMREILSRRFSHGLEEVNKIKERNLEYSNGKFCIFPDLIMMDGGKGQVNIALEVLKGFGIEIPVCGLVKDHKHRTRGIILNNEEILIRRGSGLMNLITRVQDEVHRYAITYHRSLRDKRTLHSILEDIPRIGEKRRRNLLMKFGSIDNIKKASMEELLDTPGIDKRAAESIKQYFSS", - "output": "cytoplasm ; excinuclease repair complex ; DNA binding ; excinuclease ABC activity ; nucleotide-excision repair ; SOS response" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MKPYQRQFIEFALNKQVLKFGEFTLKSGRKSPYFFNAGLFNTGRDLALLGRFYAEALVDSGIEFDLLFGPAYKGIPIATTTAVALAEHHDKDLPYCFNRKEAKDHGEGGSLVGSALQGRVMLVDDVITAGTAIRESMEIIQAHGATLAGVLISLDRQERGRGEISAIQEVERDYGCKVISIITLKDLIAYLEEKPDMAEHLAAVRAYREEFGV", - "output": "magnesium ion binding ; orotate phosphoribosyltransferase activity ; 'de novo' UMP biosynthetic process" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MLKPSDTWSWYYDNKAQSLMLDLGMDMVFCVNLSPKVLINSAFDDCKFSVDDASAYQMFVEHISYLPLSEPRKVELALNCVAARRFHKPMLPKSWFFETQGAGYYPEEGEIVSLKNDLGEGHFIIVENYECASMCMLVDMDAFALNPTKYMAFCEPIKVMNDRMAKMQVVNSSYYALVG", - "output": "cytoplasm ; division septum assembly ; FtsZ-dependent cytokinesis" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MADKKNLAVRSSYDDYIETVNKITPQLKNLLAQIGGDAAVKGGNNNLNSQTDVTAGACDTKSKSSKCITCKSKSSSSSTSTSKSSKNTSGAPRRRTTATTSFNAMDGQIVQAVTNAGKIVYGTVRDGQLEVRGMVGEINHDLLGIESVNAGKKKPSKKMPTNKKINMSSGMRRQEQINPNDCCLDMGMY", - "output": "virion component" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MDSNTVSSFQDILMRMSKMQLGSSSEDLNGMITQFESLKLYRDSLGEAVMRVGDLHSLQSRNGKWREQLSQKFEEIRWLIEEVRHRLKITENSFEQITFMQALQLLLEVEQEIRTFSFQLI", - "output": "host cell nucleus ; virion component ; exit of virus from host cell nucleus through nuclear pore" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "SVTIDYDKCKGPECAECVNACPMEVFEIQGDKVVVAKEDDCTFCMVCVDVCPTDAITVKE", - "output": "4 iron, 4 sulfur cluster binding ; metal ion binding ; oxidoreductase activity" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MAKFAPVQYKYIIKAEFEIDGIVDREDIIGAIFGQTEGLLGMELDLRELQKQGKLGRIEVEYKRVGNKTIGTITIPTSLKAVETSLIAAAIETVDRVGPAKARFRVKEIVDVRSSKREYIRNRAKELFVQLLSKTAPDIEELRRELEEAYYSKQLIEYGEEKLPAGPLVEKSDEIILVEGRADVVNLVKHGILNVLGMNGINIPKSVVELSKRKKVTLFIDGDRGGELVLRNLLAAGADIDYVAVAPPGREVEELTNKEILKALKSKIPLEQYIKNLRISINNDENKEKYKELLSKVFDTKKAIVFDEQFNIIDEKPLEEIDKLPSAYGIAIDKILDNETYAKIKGKYQLILALDSNVNAQERVITLKDIQ", - "output": "DNA-directed RNA polymerase complex ; exosome (RNase complex) ; primosome complex ; DNA primase activity ; metal ion binding ; poly(A) binding" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MEKLLDEVLAPGGPYNLTVGSWVRDHVRSIVEGAWEVRDVVTAAQKRAIVAVIPRPVFTQMQVSDHPALHAISRYTRRHWIEWGPKEALHVLIDPSPGLLREVARVERRWVALCLHRTARKLATALAETAGEAWHADYVCALRGAPSGPFYVHPEDVPRGGRAVADRCLLYYTPMQMCELMRTIDATLLVAVDLWPVALAAHVGDDWDDLGIAWHLDHDGGCPADCRGAGAGPTPGYTRPCTTRIYQVLPDTAHPGRLYRCGPRLWTRDCAVAELSWEVAQHCGHQARVRAVRCTLPIRHVRSLQPSARVRLPDLVHLAEVGRWRWFSLPRPVFQRMLSYCKTLSPDAYYSERVFKFKNALSHSITLAGNVLQEGWKGTCAEEDALCAYVAFRAWQSNARLAGIMKGAKRCAADSLSVAGWLDTIWDAIKRFFGSVPLAERMEEWEQDAAVAAFDRGPLEDGGHHLDTVQPPKPLPRPEIAATWIVHAASADRHCACAPRCDVPRERPSAPAGPPDDEALIPPWLFAERRTLRCREWDFEALRARADTAATPAPLAPRPARYPTVLYRHPAHHGPWLTLDEPGEADAALVLCDPLGQPLRGPERHFAAGAHMCAQARGLQAFVRVVPPPERPWADGGARTWAKFFRGCAWAQRLLGEPAVMHLPYTDGDVPQLIALALRTLAQQGAALALSVRDLPGGAAFDANAVTAAVRADPGQLALTSPPPDNPPPPRRARRSQRHADARGPPPPAPVRDPPPLPPSPPAPRRAGDPASPISAEPADRARDAEPEVACEPGGPATPTRADPDSDIVESYARAAGPVHLRVRNIMDPPPGCKVVVNAANEGLLAGSGVCGAIFASAAATLAEDCRRLAPCPTGEAVATPGHGCGYTHIIHAVAPRRPQDPAALEQSEALLERAYRSVVALAAARRWACVACPLLGAGIYGWSAAESLRAALAAARTEPAERVSLHICHPDRATLMHASVLVGAGLAARRVSPPPTEPLASCPADDPGRSTQRTASPPAAPPGDAAAPESRGCQGCELCRYTRVTNDRAYVNLWLERDRGATGWAMRIPEVVVYGPEHLAAHFPLNHYSVLKPAEVRPPRGMCGSDMWRCRGWQGMPQVRCTPSNAHAALCRIGIPPRVSTRGDERDPNTCWLRAAANVAQAARACGAYTSAGCPKCAYGRALSEARTHEAFAALSQRWIASHADASLDGTGDPLDPLMETVGCACSRVWVGSEHEAPPDHLLVSLHRAPNGPWGVVLEVRARPEGGNPTGHFVCAVGGGPRRVSDRPHLWLAVPLSRGGGTCAATDEGLAQAYYDDLEVRRLGDDAMARAALASVQRPRKGPYNIKVWNMAAGAGKTTRILAAFTREDLYVCPTNALLHEIQAKLRARDIDIKNAATYERALTKPLAAYRRIYIDEAFTLGGEYCAFVASQTTAEVICVGDRDQCGPHYANNCRTPVPDRWPTERSRHTWRFPDCWAARLRAGLDYDVEGEHAGTFACNLWDGRQVDLHLAFSRETVRRLHEAGIRAYTVREAQGMSVGTACIHVGRDGTDVALALTRDLAIVSLTRASDALYLHELEDGSLRAAGLSAFLDAGALAELKEVPAGIDRVVAVEQAPPPLPPADGIPEAQDVPPFCPRTLEELVFGRAGHPHYADLNRVTEGEREVRYMRISRHLLNKNHTEMPGTERVLSAVCAVRRYRAGEDGSTLRTAVARQHPRPFRQIPPPRVTAGVAQEWRMTYLRERIDLTDVYTQMGVAARELTDRYARRYPEIFAGMCTAQSLSVPAFLKATLKCVDAALGPRDTEDCHAAQGKAGLEIRAWAKEWVQVMSPHFRAIQKIIMRALRPQFLVAAGHTEPEVDAWWQAHYTTNAIEVDFTEFDMNQTLATRDVELEISAALLGLPCAEDYRALRAGSYCTLRELGSTETGCERTSGEPATLLHNTTVAMCMAMRMVPKGVRWAGIFQGDDMVIFLPEGARSAALKWTPSEVGLFGFHIPVKHVSTPTPSFCGHVGTAAGLFHDVMHQAIKVLCRRFDPDVLEEQQVALLDRLRGVYAALPDTVAANAAYYDYSAERVLAIVRELTAYARGRGLDHPATIGALEEIQTPYARANLHDAD", - "output": "host cell membrane ; host cell perinuclear region of cytoplasm ; membrane ; ATP binding ; ATP hydrolysis activity ; cysteine-type endopeptidase activity ; metal ion binding ; mRNA methyltransferase activity ; RNA binding ; RNA helicase activity ; RNA-dependent RNA polymerase activity ; DNA-templated transcription ; proteolysis ; RNA processing ; viral RNA genome replication" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "GFLTAEEKGLVNGLWGKVNVDEVGGEALGRLLVVYPWTQRFFESFGDLSSADAIMSNAKVKAHGKKVLNSFSDGLKNIDDLKGAFAKLSELHCDKLHVDPENFRLLGNVLVCVLAHHFGHDFNPQVQAAFQKVVAGVANALAHKYH", - "output": "haptoglobin-hemoglobin complex ; hemoglobin complex ; heme binding ; hemoglobin alpha binding ; metal ion binding ; organic acid binding ; oxygen binding ; oxygen carrier activity ; cellular oxidant detoxification ; hydrogen peroxide catabolic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MATERRVARVAELIKREVSQLLMYEIRDERVGAGMVSVTDVEVSGDLQHAKIFVSIYSTEEVRRSTMAGLKAASGFVRRELGQRIRLRRTPEVVFIEDRSLERGSRVLALLNQIGQQQSTSEVLES", - "output": "cytoplasm ; maturation of SSU-rRNA" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MVSKISKRMQQISQGIDRSALYGLSDAVVMLKERATARFDETVEIAMNLGIDPRHANQMVRGVVTMPNGTGVNVRVAVFATSSKADEAREAGADIVGGEDLFEIVKGGQIDFDRCIATPDMMPLVGRLGRILGPRGIMPNLRVGTVTTDVATAVRESKSGAVDFRSEKAGIIHAGIGKVSFENKKIEENVLAFVSAVVKAKPSVAKGDYVKRVTLSSTMGCGIKVDLSSFSV", - "output": "large ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; tRNA binding ; regulation of translation ; translation" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MGDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKAANGVVIATEKKLPSILVDETSVQKIQSLTPNIGVVYSGMGPDFRVLVRKSRKQAQQYYRLYKETIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLIAGYDDNGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMELDDAIHTAILTLKEGYEGQISANNIEIGIIRSDREFKVLSPAEIKDFLEEVE", - "output": "cytoplasm ; nucleus ; proteasome core complex, alpha-subunit complex ; ubiquitin-dependent protein catabolic process" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MSKSTAEIRQAFLDFFHSKGHQVVDSSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRSYVRATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIRYAWELLTSPQWFNLPKEKLWVTVYATDDEAYGIWADEVGVPRERIIRIGDNKGGPYASDNFWQMGETGPCGPCTEIFFDHGEHIAGGPPGSPDEDGDRYIEIWNLVFMQFNRQVDGTMLPLPKPSVDTGMGLERVSAVLQHVNSNYDIDLFKTLIDAVAKAVGTTDLTNKSLRVIADHIRSCAFLISDGVMPSNENRGYVLRRIIRRAARHGNMLGATDAFFYKLVAPLIEVMGPAAEELKKQQSVVEQALKMEEEQFARTLERGLSLLDEEIKNLKGDTLDGETAFRLYDTYGFPVDLTADVCRERGLKVDEEGFEAAMTAQRQRARDASGFGVDYNSLIRVDENTPFCGYEKTQQQAKVIALYHNGNAVDQIAAGDEAVVILNETPFYGESGGQVGDQGELKNAGVSFAVQDTQKYGQAIGHVGKLTQGMLRVNDSVDANVDSQRRDRIRLNHSATHLLHAALRQVLGVHVAQKGSLVNDSYLRFDFSHTEAMKPEQIRQVEDIVNAQIRRNLTVQTDVMALDDARAKGAMALFGEKYDDHVRVLSMGDFSIELCGGTHASRTGDIGLFQIISESGTAAGVRRIEATTGENALSALHRQSDVLQDIAQLLKGDSHNLTDKVRSVLDRSRALEKELQQLKAQQAAQESSSLSGKATEINGVKLLVTQLDNVDPKLLRTMVDDLKNQLGSAVIVLGTAAEGRVSLISGVTKDLTDRVKAGELVGFVAQQVGGKGGGRPDMAQAGGSDVSALPAALASVESWVAAKL", - "output": "cytoplasm ; alanine-tRNA ligase activity ; ATP binding ; tRNA binding ; zinc ion binding ; alanyl-tRNA aminoacylation" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MIKQRTLKTPVKATGVGLHSGVKVEMTLRPAAPDSGIVFRRVDLEPPAELKADPYLVTDTRLCSMLESGAAKVSTVEHLMSALAGLGIDNLLVDLTGPEIPIMDGSSAPFVFLLQSAGIVEQNAAKRYVRITRPIEVRDGDKWARFVPHHGFKIEFTIDFKHPVFDKSGKTVTIDFADTAYTKEVARARTFGFMHEVEYLRNQGLALGGSLDNAIVMDEYRVLNQDGLRYDDEFVKHKVLDAIGDLYLLGHPIIGAFEAYKSGHALNNALLRELLQHREAWEFVSFEHDEDVPSAFLRLHPLAA", - "output": "metal ion binding ; UDP-3-O- N-acetylglucosamine deacetylase activity ; UDP-3-O-acyl-N-acetylglucosamine deacetylase activity ; lipid A biosynthetic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MPRKGHVQKREILPDPMYNSKLVTSLIDHLMIDGKRGTATKILYAAFDEIKNETGNDPVEVFQQAMENVMPVLEVKARRVGGSNYQVPIEVRPDRRTTLGLRWIVQYARLRGEHTMVERLAREIIDASNNTGASVKKREDTHRMAEANRAFAHYRW", - "output": "small ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; tRNA binding ; translation" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "VPTQRLCGSHLVDALYFVCGERGFFYSPKQIRDVGPLSAFRDLEPPLDTEMEDRFPYRQQLAGSKMKRGIVEQCCHNTCSLVNLEGYCN", - "output": "extracellular region ; hormone activity ; glucose metabolic process" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MNETAKKLLVTGATELGLHLTSAQLGNFYTYASELTKWSKKINLTAIKTDEEIALKHFVDSLTLAKVVKNKGRLLDIGSGGGFPAIPLKIVLHDLHVMSVDAVEKKVIFQRHVARLLHLHDFEAVHVRGEELAKSHAGQFDWIVSRAFSDIPTFAAMTLPLLKSDGRLIAMKGRGGRDEAEAAKGALDDLGARIAELLEFRLPVSGDSRYLVVMEKVAD", - "output": "cytoplasm ; rRNA (guanine-N7-)-methyltransferase activity" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MSVSFAPAHSASPPNTSYIALAGPTASGKTAAALAIAEHVPVEIISVDSALVYRGMDIGTAKPSAEELAAVPHHLIDIRDPLHAYSAAEFVLDAQRLIAQISARGRLALLVGGTMLYFKALFDGLDEMPKADAAVRAVLAIEAAEKGWPALHAELAQVDPVTAARLAPNDSQRISRALEVFRVSGQPLSFFQQRNASKNIADNAGGTSAATLISLEPTDRAWLHGRIAQRFDAMLASGFVDEVRALRARGDLTPDLPAMRCVGYRQAWEALDGTSPMSELRDKGVFATRQLAKRQITWLRSMPQRRVVACDDPTALEQVLDLVKARTDAFQ", - "output": "ATP binding ; tRNA dimethylallyltransferase activity ; tRNA processing" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MISKIDKNKVRLKRHARVRTNLSGTAEKPRLNVYRSNKHIYAQIIDDNKGVTLAQASSKDSDIATTATKVELATKVGEAIAKKAADKGIKEIVFDRGGYLYHGRVKALAEAARESGLEF", - "output": "cytoplasm ; ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MTRRLFILITIMLCLIPALLHSQEGYREVTAAGTHKLTLTVDSPRRLGGSDAPQVARETAEALQFDMVLAGPFTVTAPSAAAASAGIRPGEFDFAPWRGAGVDLLVKSGYTVTGNAMTMEFRLYNVTQGKEILAKRYTGRPGDVRRIAHTFSDDIMAALTGERGPFTGKIAFVSTRAGAKAIFLMDYDGHNVQQLTKNRSINLNPDFSPSGKEIIFTSYRQGNPDLFRRELFTGAEARISSYRGINATGAWSPDGKTIALTLSKDGNSEIYTISRDGKNPHRLTNTSAIEVSPAWSPDVRKIVFVSDRLGKPQIFIMNADGTGVRRLTTSGNYNVSPRWSPKGDRIVYSRQEGGFQIYAINPDGTNDTRLTSEGSNEHPRWSPDGRFITFSSTRGGGEGIYVMRADGSGQTRVSGGKGRDSHPTWSPRW", - "output": "periplasmic space ; cell cycle ; cell division ; protein import" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MEILGFTVMGGGSPAWIEVPEKSKSAFWELMRRKVHRYVIFKIDDRREEIVVEKTGAPWESYDDFTASLPADAVYDLDFVSDDNCRKSKIFFISWSPSLSCIRAKTIYAVWRNQFRHELDGVHFEIQATDPDDMDLEVLRGRANRT", - "output": "actin cytoskeleton ; cytoplasm ; actin filament binding ; actin filament depolymerization" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MQIFVKTLTGKTITLEVEFSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGL", - "output": "cytoplasm ; nucleus ; mRNA binding ; protein tag ; ubiquitin protein ligase binding ; modification-dependent protein catabolic process ; protein ubiquitination" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MAKEVAGKLRLQIRGGAANPSPPVGPALGSKGVNIMEFCKQFNAKTQDRIGKLLPVVVTYYVDKSFDFVIKNPPVAVQLLEIVKLKSGSAEPNRKKIAEITWEQVKAIAEYKMADLNCFSVEKAIQMVIGTAKSMGIHVKRDFSEKQLNS", - "output": "ribonucleoprotein complex ; ribosome ; large ribosomal subunit rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYASTDMDKVLLKYTEYNEPHESRTNSDIVEALNKKEHRGCDSPDPDTSYVLTPHTEEKYKKINEEFDNMMRNHKIAPGLPPQNFSMSVTVPVTSPSALSYTNPGSSLVSPSLAASSALADTSMLSPPQATLHRNVSPGAPQRPPSTGSAGGMLSTSDLTVPNGAGSSPVGNGFVNSRASPNLIGTTGANSLGKVMPTKSPPPPGGGSLGMNSRKPDLRVVIPPSSKGMMPPLNTQRISSSQATQPLATPVVSVTTPSLPPQGLVYSAMPTAYNTDYSLTSADLSALQGFNSPGMLSLGQVSAWQQHHLGQAALNSLVAGGQLSQGSNLSINTNQNINIKSEPISPPRDRMTPSGFQQQQQPQPPPPPPQAPQPQPRQEVGRSPVDSLSSSSSSYDGSDREDPRGDFHSPVVLGRPPNSEDRESPSVKRMRMDAWVT", - "output": "nucleus ; chromatin binding ; DNA-binding transcription factor activity, RNA polymerase II-specific ; DNA-binding transcription factor binding ; histone acetyltransferase binding ; histone deacetylase binding ; protein dimerization activity ; RNA polymerase II cis-regulatory region sequence-specific DNA binding ; RNA polymerase II transcription regulatory region sequence-specific DNA binding ; SMAD binding ; apoptotic process ; cardiac conduction ; cellular response to calcium ion ; dendrite morphogenesis ; ERK5 cascade ; MAPK cascade ; mitochondrial genome maintenance ; mitochondrion distribution ; negative regulation of transcription by RNA polymerase II ; positive regulation of transcription by RNA polymerase II ; regulation of transcription by RNA polymerase II ; ventricular cardiac myofibril assembly" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MTAELKASDTEMTKPEERHLLQLLAQLEKVPHHQLEQKFVAYFKKVGKGDNQSNCTLEDFATYFLGALRQSTKRYYYSQNSETPVFPLTPIHQLKPPVADVVKEEEQQQLNESSILSRSSCSMSSTSNTTPAPQQPQGRRSTPGSGAQFCSTPNRSGGGGAGGGHSICLGNFLVNTPIQSHQRSKKKITPQKQQQNQHASLGSGTGAGATPQSKPRRRVLPMTISKNVSASSSFGDTSSFSNENNFWRISQSSEIFDRSQEAALEMEARKFLLLKKQEIKSEAPVNVSQQERTPEDEVFPEEAISLEGVANANHLQLLSTIYSLLMDLNLVPNVLRELSFVVHLLNVRDFGQSPVKSYVPSALEGLTQHKSCVYFAAKLLENQKKLLLQLDKRTLSVLLQNERLSLLPQGVVQELETHCQRRQDSTTPFAMDTSSSSQQNVYYHVENDSRDNFPSQNEFGAFKSQRDLFYKALKRWEVSHLNRGFNFPSELGPRIMDIYKKSEHPVNMTHLAKLFVNQLLISATETTESPEELGLKLDPLRHNKLAQRLVTSSSSVEGQFPRSQAFFRDFIAVCSSVAFLVHLKLELFVQLMRNNDSTFDLLQLTDDVAVEEQSAQQGPYIVRVQTMANMLILAKFLGYVTVMPFSGTTQHGNPTPPYLCPQQLQLRNHFRPDFNLREILERSMRQGKLLITLPWLVQYLAMLDLVSLHLPDAVATLELLYGLYADIRMAKLQPAAVFIARSCIGWLLDAQPQLVNGYYNYRAQEAGVGSISAIVDICLKDLSCHDKSHAPLLDELLPVACPFLQEFRVSITPSRQAKSGRFRYITTRLEQLQQNSSSISKDAIVASELSPAEQQQRKLVDAYLQSQNASTRRLIEFVTERTFKCVVKDAQQEILLPSKASADAKVNEIKSTMLEEVFQELHEIFQDARENACQRWKEHVHQMLDRRIEHSLDGLLPSSTNAVLRSTYAHLIRVQAQTQLQQWLQSSVLQSTFYHGDLQELATKVCNCNRNKADAAAAGGGGSSELQLSPDIGFSLSEFLYQLQQWLHCLSLRPEYVGSQEDLAELLRKAQKAVLLPKMPTVFYHLIGSGLVHLLQLLITRKPNFLDKDIISASCSVWRSQQLMDSKASPGIFDGLISISFVQEMANSADSFRMLETILRSMLQSGAIRADHLNELFMPLFAENWSPKVWCMLSELLQQLSLSGKDSEAHYASGDSPEDEAKSHLFMEMLADLSRDLDNF", - "output": "cytoplasm ; nucleus ; chromatin organization ; imaginal disc morphogenesis ; morphogenesis of a polarized epithelium ; olfactory behavior ; regulation of cell population proliferation" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MFVSRLAASGLLLLALLALSLDGKPVQEKPGRSPPISPLLVPPPPPPPHWPPPHHIPPLSVQKFPPGWKPTHPHHIPPLEVQQWSQGGPRSELVQPHESPAGGTTAFREELSLGPEAASGPAAPQRLPKRKGASATSAASRSMRDLRADGKQARQKWGRMVQPDHHAAPGGGGGGGGGARRLKGLAKKAVGKGCFGLPLDRIGSMSGMGC", - "output": "extracellular region ; hormone activity ; metalloendopeptidase inhibitor activity ; toxin activity ; negative regulation of peptidase activity ; regulation of blood pressure ; vasodilation" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MRAIIIGIGQCGGKIADIFSLVDFEAIAINTSRGDLEYLKHIPQDKRILIGESIVGGKGVNANPVLGREAMKRDLPMVMKKINSMVGYEDVDIFFLTFGFGGGTGAGGTPVLAEALKEEYPDSLVVAIGALPLKEEGIRPTINAAITIDKLSKVVDSIIAIDNNKLKESDEDISQAYERINYTIVERIASLLALIDVPGEQTLDASDLKFVLRAMGSFATVGYAKADAEKVKSLSRLIIRSFENEGLYLDVSLESALYGLVAIHGPPEVLKAKDIFEALNELTQRIRGKQIFRGFYPDPRERSVEVVTLLSGIYESKSIEDIILTAKKYAREFMKAKEEGEAKKRELLSGLPDFDDVYSGEESEG", - "output": "cytoplasm ; microtubule ; GTP binding ; GTPase activity ; microtubule-based process ; regulation of cell shape" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MAAAKPENLSLVVHGPGDLRLENYPIPEPGPNXVLLKMHSVGICGSDVHYWQHGRIGNFVVKKPMVLGHEASGTXVKVGSLVTHLKPGDRXAXEPGA", - "output": "mitochondrial membrane ; motile cilium ; D-xylulose reductase activity ; L-iditol 2-dehydrogenase activity ; zinc ion binding ; flagellated sperm motility" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MPSRNILVINCGSSSIKFALVNEAHSLFPLHGLAERLGSRDAVLRWKRGGDSDSLMIPNADHRAALAQLLPMVQNAAGGKLHGIGHRVVHGGELFTHATRIDDRVVEAIRATAPLAPLHNPANLQGIEAAMTLFPKLPHVAVFDTAFHQSLPEHAYRYALPEALYREHGVRRYGFHGTSHRYVSHRAAEMAGLAVGDSSWLSAHLGNGSSTCAIVNGQSLDTSMGLTPLEGLVMGTRSGDVDPNLHSHLARTLGWSLERIDSMLNNESGLLGLSDLSNDMRTLEQEREQGHPGAALAIEVFCYRLAKSLAAMSCALPQLDGVIFTGGIGENSPLVRAKTAAHLRLFDLRLDQEANARCVRGVAGPIQAAGHPRVLVIPTNEERQIALDTLALLD", - "output": "cytoplasm ; acetate kinase activity ; ATP binding ; magnesium ion binding ; acetyl-CoA biosynthetic process ; organic acid metabolic process ; phosphorylation" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MNQADLTERSDALQEQILNLYEQDSKDIQAQIQYWDLNRKLYVTYYYARKEGYSHLGLQPLPALQVSEYKAKQAIEMGLLLTSLSKSQYASELWGLTDTSAELLLTPPRNTFKKKGYTVNVWFDNNENNTFPYTNWEYIYYQDDIEQWHRTRGEVDYNGLYFTENNGNRAYFLLFDSDAQTYSQTGTWTVHYKNQIISAPVTSSSKQSSDDYTSKAGQQPHFFASSSSPTTTDGGQTSQEGVSSSTTSPSAVRLRRRRSNEQQRELSSRESPRTKRRRVPDEVDRQSAVGSAPTAEEVGSRHRSLPRSGISRLARLQGEARDPPILLIKGLANSLKCWRYRLKKYTRYFKCMSTVFRWVDIDVPESSRHKLLVVFNDTTQRDVFMKLVTLPRGCTYTFGTLNSL", - "output": "host cell nucleus ; DNA binding ; DNA-binding transcription factor activity ; nucleotide binding ; DNA replication ; regulation of DNA replication ; viral DNA genome replication" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MISSNDFRTGTTIELDGAVWRVIEFLHVKPGKGSAFVRTKLKAVQSGSVVEKTFRAGEMVPQALLEKTTLQHTYMDSGDYVFMDMSSYEETRLTAAQIGESRKYLTEGMEVNVVSWNERPLEVELPNSVVLTVKETDPGVKGDTATGGTKPAILETGAQVMVPLFISVGEKIKVDTRNDSYLGREN", - "output": "cytoplasm ; translation elongation factor activity" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MSDNSPTTPSAPAPEEVEAAMAAHADDELARLQGELAELKAKSAELADQFLRAKAEAENARRRAEDEVAKARKFGIESFAESLLPVADSLDAALAIKEATPQQLREGADATLRQLTSTLERNKVLAINPAAGTKFDPHQHQAISVVPAEQEANTVVAVLQKGYVIAERVLRPALVTVSASK", - "output": "cytoplasm ; adenyl-nucleotide exchange factor activity ; protein homodimerization activity ; protein-folding chaperone binding ; protein folding" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MKFAVLVFPGSNCDRDMYNAAIKSGVDAAYVDYRETTLDGFDGVLIPGGFSFGDYLRSGAMASVAPIIKEVKRFAKEGKPVLGVCNGFQILTEIGLLPGALLHNDSHLFISRNETLKITNNQTPFTHLYVKNENVVYPVAHGEGHYYCTDEIYRELNDNNQIILKYTNNPNGSYEDIAGIVNKEGNVCGMMPHPERALETLLGTNSGVKLFESMVKSWREQNV", - "output": "cytoplasm ; ATP binding ; glutaminase activity ; phosphoribosylformylglycinamidine synthase activity ; 'de novo' IMP biosynthetic process ; glutamine metabolic process" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MMHIPNRSIQAANIFFSSGAILLLIVGLIMEDWVELIPKVRKDKTTHSPWLGCCPPFWPEESLEVVRRIMRMTLNISIYLNLIIGLQFSYMISQNKCVHLLVGFLSFFAGCLLFYAIIVYHHKLNKGQYVYFVNYKTKWIAFTVYLTIALFLTCGIFCFIQSTNRCECMKFCIPHTESKSQEMIPSTIEVVSLPPRCAMPRSIVHVHSVTSKDGSLNRPHTQARRVTWAL", - "output": "inner acrosomal membrane ; outer acrosomal membrane ; protein phosphatase 1 binding ; protein phosphatase inhibitor activity ; negative regulation of phosphatase activity" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MAARPKLHYPNGRGRMESVRWVLAAAGVEFDEEFLETKEQLYKLQDGNHLLFQQVPMVEIDGMKLVQTRSILHYIADKHNLFGKNLKERTLIDMYVEGTLDLLELLIMHPFLKPDDQQKEVVNMAQKAIIRYFPVFEKILRGHGQSFLVGNQLSLADVILLQTILALEEKIPNILSAFPFLQEYTVKLSNIPTIKRFLEPGSKKKPPPDEIYVRTVYNIFRP", - "output": "cytosol ; glutathione transferase activity ; identical protein binding ; protein homodimerization activity ; glutathione metabolic process ; xenobiotic metabolic process" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MKKNLTFFMVIALLFTITPNVYAMHIAEGFLPPMWSGVYFVISAPFIIIGLKQIRERAKDNKDIKMLLGLVAAYAFILSAMKIPSVTGSCSHPTGTGLSAIIFGPFISAIVGLIVLIFQAILLAHGGITTLGANTLSMGIMGPIVSYLIYRGFKNKNQKVAVFLAATLGDLFTYFITSVQLALAFPAQQGGIAASFAKFFSIFSITQIPLAIMEGILTVIIFEFVMKYASKEIEVLGGVRK", - "output": "ATP-binding cassette (ABC) transporter complex ; cobalt ion transmembrane transporter activity ; cobalamin biosynthetic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MLPVHTEVKPNPLQDANLCSRLFFWWLNPLFKAGHKRRLEEDDMFSVLPEDRSKHLGEELQGYWDKEVLRAKKDARKPSLTKAIVKCYWKSYLILGIFTLIEETTRVVQPIFLGKIIDYFEKYDSDDSAALHTAYGYAAVLSLCTLILAILHHLYFYHVQCAGMRIRVAMCHMIYRKALRLSNSAMGKTTTGQIVNLLSNDVNKFDQVTIFLHFLWAGPLQAIGVTILLWVEIGISCLAGLAILVILLPLQSCIGKLFSSLRSKTAAFTDARIRTMNEVITGMRIIKMYAWEKSFADLITNLRKKEISKILGSSYLRGMNMASFFIANKVILFVTFTTYVLLGNKITASHVFVAMTLYGAVRLTVTLFFPSAIERVSEAVVSVRRIKNFLLLDELPERKAQEPSDGKAIVHVQDFTAFWDKALDTPTLQGLSFTARPGELLAVVGPVGAGKSSLLSAVLGELPPTSGLVSVHGRIAYVSQQPWVFSGTVRSNILFGRKYEKERYEKVIKACALKKDFQLLEDGDRLVIGDRGARLSGGQKARVNLATAVYQDADIYLLDDPLSAVDAEVGKHLFQLCICQTLHEKITILVTHQLQYLKAASHILILKDGEMVQKGTYTEFLKSGVDFGSLLKKENEEAEPSPVPGTPTLRNRTFSEASIWSQQSSRPSLKDGVPDAQDAENTQAAQPEESRSEGRIGFKAYKNYFSAGASWFFIIFLVLLNLMGQVFYVLQDWWLSHWANRQGALNDTKNANGNVTGTLDLSWYLGIYTGLTAVTVLFGIARSLLVFYVLVNASQTLHNRMFESILKAPVLFFDRNPIGRILNRFSKDIGHMDDLLPLTFLDFIQTLLLVVSVIAVAAAVIPWILIPLVPLSIIFVVLRRYFLETSRDVKRLESTTRSPVFSHLSSSLQGLWTIRAYKAEERCQELFDAHQDLHSEAWFLFLTTSRWFAVRLDAICAVFVIVVAFGSLVLAKTLDAGQVGLALSYSLTLMGMFQWSVRQSAEVENMMISVERVIEYTDLEKEAPWECRKRPPPGWPHEGVIVFDNVNFTYSLDGPLVLKHLTALIKSREKVGIVGRTGAGKSSLISALFRLSEPEGKIWIDKILTTEIGLHDLRKKMSIIPQEPVLFTGTMRKNLDPFNEHSDEELWKALEEVQLKEAIEDLPGKMDTELAESGSNFSVGQRQLVCLARAILKKNRILIIDEATANVDPRTDELIQQKIREKFAQCTVLTIAHRLNTIIDSDKIMVLDSGRLREYDEPYVLLQNPESLFYKMVQQLGKGEAAALTETAKQVYFRRNYPDIAFSSPAVMSTSNGQPSALTIFETAL", - "output": "apical plasma membrane ; basolateral plasma membrane ; external side of apical plasma membrane ; membrane ; plasma membrane ; platelet dense granule membrane ; ABC-type bile acid transporter activity ; ABC-type glutathione S-conjugate transporter activity ; ABC-type xenobiotic transporter activity ; ATP binding ; ATP hydrolysis activity ; ATPase-coupled transmembrane transporter activity ; efflux transmembrane transporter activity ; glutathione transmembrane transporter activity ; guanine nucleotide transmembrane transporter activity ; prostaglandin transmembrane transporter activity ; purine nucleotide transmembrane transporter activity ; urate transmembrane transporter activity ; xenobiotic transmembrane transporter activity ; bile acid and bile salt transport ; bile acid signaling pathway ; cAMP transport ; cilium assembly ; export across plasma membrane ; leukotriene transport ; positive regulation of smooth muscle cell proliferation ; prostaglandin secretion ; prostaglandin transport ; response to organic cyclic compound ; response to organic substance ; response to organonitrogen compound ; response to xenobiotic stimulus ; transmembrane transport ; urate transport" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MAHACVSTSASSLRFTAGFVSASPNGSSFDSPKLSLPFEPLRSRKTNKLVSDRKNWKNSTPKAVYSGNLWTPEIPSPQGVWSIRDDLQVPSSPYFPAYAQGQGPPPMVQERFQSIISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPTKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLAYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLAAA", - "output": "chloroplast ; chloroplast envelope ; chloroplast stroma ; chloroplast thylakoid ; chloroplastic endopeptidase Clp complex ; endopeptidase Clp complex ; extracellular region ; plastid stroma ; thylakoid ; ATP-dependent peptidase activity ; ATPase binding ; serine-type endopeptidase activity ; protein quality control for misfolded or incompletely synthesized proteins" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MAKKKGGATTRSGKKKVCVFCKENIEYVDYKDYNMLRRFTSERGKIRARRVTGLCPQHQRETARAIKRAREMALLPYIAGR", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MKLHELKPAEGSRKVRNRVGRGIGSGNGKTAGKGHKGQNARSGGGVRLGFEGGQTPLFRRLPKRGFTNINRKEFAIVNLSTLNRFEDGTEVTPELLLETGVISKLNDGVKILASGAVEKKLTVKAHKFSSSAKEAIEAAGGSVEVI", - "output": "large ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MNVSAIVVEYNPMHNGHLYHIKKTKKLTNCDALVCIMSGNFVQRGFPSILDKWTKANIAISNGVDLVIELPTLYSLSSAEFFSFGAVSILDSLNIINSICFGSEIGNINALQDIATTLLEEPLEYKILLKNYLDKGISFAKARNLALVELNRDNKIMSENISKILSLSNNILGIEYLKSLLLLNSSIKPFTITREGADYKDENLHEEYSSASSIRKYLKENKNINILKDFLPLEGFLEFKRLITKGYNFSMEDSMINYIRYKYISGYKNLHNLIDVSEGLDNRIYKSLEKNFTYDSLVGEIKSKRYAYSRIGRILCQYFIGFENYDLNSLLKSTPNYMRVLASNEMGLKVLKKIKKHSSINIYTKLPKNTNTLLSLDIKATNAYSLLNNNIRFNEDYFRSPTIIKNTIY", - "output": "cytoplasm ; ATP binding ; ligase activity, forming carbon-nitrogen bonds ; tRNA binding ; tRNA modification" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MALDIHAHRILILDFGSQYTQLIARRVREIGVYCELHPFDMDDEAIREFNPRGIILAGGPESVHEANSPRAPQAVFDLNVPLLGICYGMQTMAEQLGGKVEGSDLREFGYARVDVVGKSRLLDGIEDHVDGDGVLGLDVWMSHGDKVTQMPGNFNILASTPSCPIAGMFDDARGYYGVQFHPEVTHTKQGGRILSRFVQDICGCEALWTPSNIVEDAIAQVRQQVGSANVLLGLSGGVDSSVVAALLHRAIGDQLTCVFVDNGLLRLHEGDQVMAMFKENMGVKVIRADAEKQFLDNLEGEADPEKKRKIIGRTFIDVFDAEASKLDNIQFLAQGTIYPDVIESAGAKSGKAHVIKSHHNVGGLPEEMNLKLVEPLRELFKDEVRKIGLELGLPYDMVYRHPFPGPGLGVRILGEVKKEYADILRRADHIFIEELRKADWYHKTSQAFVVFQPVKSVGVVGDGRRYAWVVALRAVETVDFMTARWAHLPYDLLETVSGRIINEIDGISRVTYDVSSKPPATIEWE", - "output": "ATP binding ; GMP synthase activity ; glutamine metabolic process" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "GGSCGQCRVHIKEGGGDILPTELDHISKGEAREGCRLACQVNVKNDMEIELEESIFGVKKWDCEVISNDNKATFIKELKLQIPDGESVPFRAGGYIQIEAPAHHVKYADFDIPEEYRGDWNHFGFFDLESKVDEETIRAYSMANYPEEEGIIMLNVRIATPPPRNLSLPCGKMSSYIWSLKEGDKVTISGPFGEFFAKDTDAEMVFVGGGAGMAPMRSHIFDQLKRLNSKRKISFWYGARSKREMFYVEDFDGLAEQNENFVWHTALSDPQPEDNWEGYTGFIHNVLFENYLKDHEAPEDCEY", - "output": "plasma membrane ; 2 iron, 2 sulfur cluster binding ; flavin adenine dinucleotide binding ; metal ion binding ; oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor ; sodium ion transport" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MPKANNAVASKARRKRVLKKAKGYWGSRGNILTVVKHAVDKGEQYAYRDRRAKKRSFRSLWIIRINAAARLNGTTYSRLMDAMIKKNVEIDRKTMAEIAVRDPEAFTQLVKTIID", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; ribosomal large subunit assembly ; translation" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MDDATVLRKKGYIVGINLGKGSYAKVKSAYSERLKFNVAVKIIDRKKTPTDFVERFLPREMDILATVNHGSIIKTYEIFETSDGRIYIIMELGVQGDLLEFIKCQGALHEDVARKMFRQLSSAVKYCHDLDIVHRDLKCENLLLDKDFNIKLSDFGFSKRCLRDSNGRIILSKTFCGSAAYAAPEVLQSIPYQPKVYDIWSLGVILYIMVCGSMPYDDSDIRKMLRIQKEHRVDFPRSKNLTCECKDLIYRMLQPDVSQRLHIDEILSHSWLQPPKPKATSSASFKREGEGKYRAECKLDTKTGLRPDHRPDHKLGAKTQHRLLVVPENENRMEDRLAETSRAKDHHISGAEVGKAST", - "output": "acrosomal vesicle ; centriole ; cytoplasm ; nucleotide-activated protein kinase complex ; nucleus ; ATP binding ; magnesium ion binding ; protein serine kinase activity ; protein serine/threonine kinase activity ; protein-containing complex binding ; cellular response to glucose starvation ; intracellular signal transduction ; negative regulation of TOR signaling ; peptidyl-serine phosphorylation ; protein autophosphorylation ; protein phosphorylation ; spermatid development" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MVMTDPIADFLTRIRNANMVKHDKLELPASKIKKEIAEILKREGFIRDVEYIEDDNAGTIRVFLKYGATGERVITGLKRISKPGLRVYAKSTEVPKVLNGLGIAIVSTSQGVLTDKEARAKQVGGEVLAYVW", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MQSPEKITPYDTECPKNEQVEAMFNHIAGHYDRLNHLFSWGMDRVWRQKAIRMIEPFAPHTVLDVATGTGDLAIEICRHIPSVKQVTGVDLSLEMMRIGEQKVRSENLDNRITFMQKDCLDLPFADHSFDAVTVAFGLRNFQNIKLGLEEMYRVLNEGAPLMILELSRPVSFPWKQGYNFYASHVIPVVGRFLSQDAEAYTYLPESIAAMPQREELADLMLSVGFREAYYRSLSLEVATVYMGLK", - "output": "demethylmenaquinone methyltransferase activity ; S-adenosylmethionine:2-demethylmenaquinol methyltransferase activity ; S-adenosylmethionine:2-demethylmenaquinol-7 methyltransferase activity ; S-adenosylmethionine:2-demethylquinol-8 methyltransferase activity ; menaquinone biosynthetic process ; methylation" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MAKSKFERTKPHVNVGTIGHVDHGKTTLTAAITTVLSSKFGGEAKAYDQIDAAPEEKARGITINTAHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLARQVGVPYIIVFLNKCDMVDDAELLELVEMEVRELLSKYDFPGDDTPIIKGSAKLALEGDKGELGEGAILKLAEALDTYIPTPERAVDGAFLMPVEDVFSISGRGTVVTGRVERGIIKVGEEIEIVGLKPTLKTTCTGVEMFRKLLDQGQAGDNVGILLRGTKREEVERGQVLCKPGSIKPHTHFTAEVYVLSKDEGGRHTPFFNNYRPQFYFRTTDVTGAIELPKDKEMVMPGDNVSITVKLIAPIAMEEGLRFAIREGGRTVGAGVVAKIIE", - "output": "cytoplasm ; GTP binding ; GTPase activity ; guanosine tetraphosphate binding ; translation elongation factor activity" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MSLNPRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKVLERNSKVDPGEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHMGHVSMMHGVDPNPHMSLYAAKASGMMGLTAEMLGKMHGISREQQDAFAVRSHQLAHKATVEGKFKDEIIPMQGYDENGFLKIFDYDETIRPDTTLESLAALKPAFNPKGGTVTAGTSSQITDGASCMIVMSAQRAKDLGLEPLAVIRSMAVAGVDPAIMGYGPVPATQKALKRAGLNMADIDFIELNEAFAAQALPVLKDLKVLDKMNEKVNLHGGAIALGHPFGCSGARISGTLLNVMKQNGGTFGLSTMCIGLGQGIATVFERV", - "output": "cytoplasm ; acetyl-CoA C-acyltransferase activity ; fatty acid beta-oxidation" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MLPLLGLCFALPLCAGLLEEARSWEDTSDQVGLRIPRQVRLLQRLKTKPLMTEFSVKSTIISRYAFTTVACRMLNRGSEDQEVTFQMQIPAAAFITNFTALIGDKVYQGEITEREKRNGDKVKEKRNKTIEDNGEKGTETFRASAVLPSKDKAAFLLSYEELLQRRLGKYEHVVSVRPQQLVGRLTVEVTVLERPGIAELEVLGLQNSRQRGSGRGPDDSGPPPSTVINQNETFAKVVFKPSVVQQAKIAQNGILGDFIVRYDVNREQSIGDIQVLDGYFVHYFAPKDLPPLPKNVVFVLDSSASMVGTKLRQTKDALFTILHDLRPQDHFNIVGFSNRIKVWKDHLVSVTPNSIRDGKVYIHHMSPSGGTDINGALQRGIQLLNDYVAHNDIEDRSVSLVVFLTDGKPTVGETHTFKILNNTREATRGRVCIFTVGIGADVDFKLLEKLSLENCGLTRRVHEDHDARAQLIGFYDEIRTPLLSDIRVDYPPSLVERATRTLFPNYFNGSEIVIAGKLVDRAMDRLHVEVTASNSKKFVVLKKDVPVEPRKVGIDVSQSPRPRGRGQEEPNHLERLWSYLTLKELLSAWLQSIEEPERERLRQEAQALAVNHHFLIPFTSMTLKSAPRTEAPEAAYGMSSTSMATGPETVMQSLRGTHLQPGPAVKKPYNPRIKISKTSADGDPHFVVDFPLSNLTVCFNIDGEPGHILRLVSDHADSGVTVNGELIGAPAPPNGHKKQRTYFRTITILVNKPERSYLEITPSRVIVDGGDRLVLPCNQSAVVGRRGLEVSVSANASVTISIQGTVAFVVLLHLYKKPAPYQRNHLGFYIANGQGLSSNCHGLLGQFLNQEARLIGLSKSPAHPPVPEAGERSEAVLEVKGRQVPVVWKQRRIYNGEEQVDCWFARNNAAGLIDGEYKGYLAAHPFDSETAFGPGLSQGL", - "output": "extracellular region ; serine-type endopeptidase inhibitor activity ; hyaluronan metabolic process ; negative regulation of peptidase activity" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MATIHFTKVHGSQNDFFLVDEEGNQIMDWSDAKRADFAIKLCDREHSLGGADGILYVTKSSEAGPIGQMRVVNSDGSIASMCGNGLRTVARYLLEKHALTEAKVETMKAILDVKKATSLGFDIPTYQVEISPVKFNAESLPMNVGVEKLFNQVVPELDAELAFSAVSVPNPHLITFVDQTVLDSDRQETLASYLNSENPYFPDGVNVSFVKRLSDDAIYVRTFERGVGFTNACGTAMSACSLIKKMLDKDTFETPLNVYNDGGRVQVTAKKDEAGDISLQLIGNATFVSTGSVSYESDTVTELTNEATPEQAQYQELVKEVKEFLKTTE", - "output": "cytosol ; diaminopimelate epimerase activity ; lysine biosynthetic process via diaminopimelate" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MDQFECINVADAHQKLQEKEAVLVDIRDPQSFAMGHAVQAFHLTNDTLGAFMRDNDFDTPVMVMCYHGNSSKGAAQYLLQQGYDVVYSIDGGFEAWQRQFPAEVAYGA", - "output": "cytoplasm ; thiosulfate sulfurtransferase activity ; glycerol metabolic process" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MVKDILAPGLRVVFCGINPGLSSANTGFPFAHPANRFWKVIHLAGFTDRQLKPEEAEKLLDFRCGVTKLVDRPTVQATEVKLHELRSGGRNLIEKIEDYQPAALAVLGKQAFEQGFSQRGIAWGKQKIAIGATMVWVLPNPSGLNRIKTEKLVEAYRELDQALIMRGL", - "output": "cytoplasm ; DNA binding ; pyrimidine-specific mismatch base pair DNA N-glycosylase activity ; base-excision repair, AP site formation" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MNIAEFHQNIEHVWQKIEEELENQGADVDCETQGSVFTITFDNRTQIVINKQEPLLELWIASKLGGFHFAFKNGEWVSNDGQRFWDCFVEACAAHGENVQF", - "output": "cytoplasm ; ferric iron binding ; iron-sulfur cluster assembly" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MAISKEKKNEIIAQYARHEGDTGSVEVQVAVLTWEINHLNSHIKEHKKDHATYRGLMKKIGHRRNLLAYLRRTDVNRYRELIQSLGLRR", - "output": "cytoplasm ; ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MAFRENVLEILEEITETEEVVQNTNIKLFDEGLLDSMATVQLLIEIEEKLDITVPVSEFDRDEWATPEMIITQLEALK", - "output": "cytoplasm ; D-alanyl carrier activity ; cell wall organization ; lipoteichoic acid biosynthetic process" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MRIPRIYHPEPLTSHSHIALCEDAANHIGRVLRMGPGQALQLFDGSNQVFDAEITSASKKSVEVKVLEGQIDDRESPLHIHLGQVMSRGEKMEFTIQKSIELGVSLITPLFSERCGVKLDSERLNKKLQQWQKIAIAACEQCGRNRVPEIRPAMDLEAWCAEQDEGLKLNLHPRASNSINTLPLPVERVRLLIGPEGGLSADEIAMTARYQFTDILLGPRVLRTETTALTAITALQVRFGDLG", - "output": "cytoplasm ; methyltransferase activity ; methylation ; rRNA processing" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MVRLNVKPTRMELNNLKERLTTAERGHKLLKDKRDELMRRFISLIRENNQLRKEVESYLIDNLKSFAVAKSLKNSQMVEELFSIPSKEIELFVEKENIMSVTVPRMHMNITSQNENSEYSYLSSNSEMDDVFATMNSLIYKLLRLAEVEKTCQLMADEIEKTRRRVNGLEYSIIPNLSETIHYIELKLEEAERANLVRIMKVK", - "output": "ATP binding ; proton-transporting ATP synthase activity, rotational mechanism ; proton-transporting ATPase activity, rotational mechanism ; proton motive force-driven plasma membrane ATP synthesis" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MFLLSGYEYFLGFLLIAAAVPILALVTNLIVAPKGRNGERKLTYESGMEPIGGAWIQFNIRYYMFALVFVIFDVETVFLYPWAVAFNRLGLLAFIEALIFIAILVIALAYAWRKGALEWS", - "output": "plasma membrane-derived thylakoid membrane ; NADH dehydrogenase (ubiquinone) activity ; quinone binding ; photosynthesis, light reaction" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MGLTGTNTTLVAPQPKGILDPRTGKPVGSDDAFFNDLNGELSDKGFIVTSADALITWARTGSLMWMTFGLACCAVEMMHISMPRYDAERFGIAPRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRYVISMGSCANGGGYYHYSYSVVRGCDRVVPVDIYVPGCPPTAEALLYGILLLQKKIRRTGTIER", - "output": "plasma membrane ; 4 iron, 4 sulfur cluster binding ; iron ion binding ; NADH dehydrogenase (ubiquinone) activity ; quinone binding" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MVKVGINGFGRIGRLVTRAAFLTKKVEIVAINDPFIDLDYMVYMFQYDSTHGKYKGEVKAEGGKLVIDGHAITVYSERDPANIKWGDAGATYVVESTGVFTTIEKASAHIKGGAKRVIISAPSADAPMFVMGVNHEKYDNSLTVVSNASCTTNCLAPLAKVINDNFVIVEGLMSTVHAITATQKTVDGPSGKLWRDGRGASQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVVDLTVRLEKPAKYDEIKKVVKAAADGPMKGILGYTEHQVVSTDFNGDCRSSIFDAGAGIALNDHFVKLVTWYDNEFGYSNRVCDLMAHMASKE", - "output": "cytoplasm ; cytosol ; microtubule cytoskeleton ; nucleus ; glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity ; microtubule binding ; NAD binding ; NADP binding ; peptidyl-cysteine S-nitrosylase activity ; glucose metabolic process ; glycolytic process ; microtubule cytoskeleton organization ; neuron apoptotic process ; peptidyl-cysteine S-trans-nitrosylation ; positive regulation of I-kappaB kinase/NF-kappaB signaling ; positive regulation of type I interferon production ; protein stabilization" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MFCYQCEQTDRTGARPGCASAKGNCGKDSTTADLQDLLVHAVKGIAQYGAIARTMGVPDREAERFVLYAMFTTLTNVNFHAARFVALLREAAQTRDRVKAACEAHARAAGTAVPVLHGPAEWQPADDLAGLLKQAASVGIDAGLDTVGADIVGLRALVLYGLKGVCAYAHHAQVLGYERDDIYEGVDAALAFLAGNPADVDALLAHALDLGRLNLTVMELLDNANTGRFGVQQPSAVRVSPVAGKAILVSGHDLGDLHALLEQTAGTGIQVYTHGEMLPAHAYPSLKAFPHLAGNYGGAWQDQQSDFARFPGPILMTSNCIIEPLPQYRQRIFTTGPVGWPGVRHLEHHDFPTLIRAAQALPGFQATAPEQTITVGFGRHAVLGVADKVIDAVKAGQIRHFFLIGGCDGAAPGRNYYTEFAEQAPDDTVVMTLGCNKYRFNRHAFGDIGGIPRLLDIGQCNDSYSAIRIATALADAFECGVNDLPLSLVISWFEQKAAAVLLTLLALGIRNIRLGPTLPAFVTPGVLAVLVDQFGIQPIGDAGADLAAALARRAA", - "output": "cytoplasm ; 4 iron, 4 sulfur cluster binding ; hydroxylamine reductase activity ; metal ion binding" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MRLRNKPWAEDYLRKHNTVVDLDGTHAGKMSEWFEKDQPIYIEVGSGMGQFITELAAQHPEVNFVSLERDKNVMIRVLDKVLEKDLQNIKLICNDAMELTDYFKDGEVDRVYLNFSDPWPKKRHAKRRLTYHSFLALYKAILKDEGEIHFKTDNRGLFAYSLESMSQFGMYFTKINLNLHDEDDEDNIETEYELKFADKGSRIYRMEAKFH", - "output": "tRNA (guanine-N7-)-methyltransferase activity" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MPPQIPNENDDLFTRWLKSRAIIQRAVSTRECFDSEVFLASGGWNITNEIITLKKYYQLKWPNSSCNSFHPKTVEFIKERLHNLEEHDSSWKIPNPAYSFKKAFLEDTKSAFSNLEPVWGPSRLLNPAELLLPQDEKLLVQEIPLEFAPFQYTNRFAYGGLQFKNNLFVTYGSYSFLAAGQCVEVHNFDILLNVSSLEICHALLPVIIPDDGDVRNFRNSSYVKFKDTQFNSIPELCSINFMKICNFMHQDFLLACGDNGIVYIWEINKVIKIFNKFTSDILGGKDNSRERYINVDPYMVLRVEESCWSVDVIDINGIIYIAVGHNKPGVTVFAFDKDVKKERRYIRPLDLPSSHNVPCVNFVPNSKDSVGYITLSYCSIFGNVVTVKLKEHDCTILTSFLDTQFFGDDLWTITPLTKKDFAKVDNFELLNLNYQDGFKESMLYSICRDDFLLGYYCDNAYLSGNFGIGTLLNQFQVPVTDLRLTSSAGIPDEVIPLRFTSFDRNYTTTGSIKYEYSREDFALILHAGDLDDMNDAVTKNTSCEQHLHQWTFWEDSGYKHYRATERGFSKYKDIINTFPQLITPSGRNKTSQYQNTSGRKICEPSTYKLTDLENDIEDISREFNRSIRNLKMDKQRQLRTSKEFKSLSSVNHIPNIESGNFLWYNTDAAADWRTLFGKDLNTVLKDPEICSLQLNSTEEDDVNSDPENEESGSSLTSFQRRYRDTEQRAHLKSESQKSWGFHNYVRNVKRLLESAVPGSEDSPLGYQLSEMHDEFFFLTTAHRLVLMKANPLIIISATHHEIFPLDGVVTCASKSLLQALNRINFVCHIKELNCIAVASQLGLISLLRLTEYRGIYSFRQEYILGWEVQDPVNPSPECRCNRNLFDAPMYGADGESSDTYCGVCDVYFPMGDICGLDYTYASDSEELKRKGYATLYVASRGSLRAFKITTEHGTTQQ", - "output": "nonfunctional rRNA decay" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MGLHLTVPGLRRDGRGVQSNSHDTSSKTTADISRCPQHTDAGLQRAATPGISRLLGISSRSVTLTKPRSATRGNSRYHWVPAAAGWTVGVIATLSLLASVSPLIRWIIKVPREFINDYLFNFPDTNFAWSFVLALLAAALTARKRIAWLVLLANMVLAAVVNAAEIAAGGNTAAESFGENLGFAVHVVAIVVLVLGYREFWAKVRRGALFRAAAVWLAGAVVGIVASWGLVELFPGSLAPDERLGYAANRVVGFALADPDLFTGRPHVFLNAIFGLFGAFALIGAAIVLFLSQRADNALTGEDESAIRGLLDLYGKDDSLGYFATRRDKSVVFASSGRACITYRVEVGVCLASGDPVGDHRAWPQAVDAWLRLCQTYGWAPGVMGASSQGAQTYREAGLTALELGDEAILRPADFKLSGPEMRGVRQAVTRARRAGLTVRIRRHRDIAEDEMAQTITRADSWRDTETERGFSMALGRLGDPADSDCLLVEAIDPHNQVLAMLSLVPWGTTGVSLDLMRRSPQSPNGTIELMVSELALHAESLGITRISLNFAVFRAAFEQGAQLGAGPVARLWRGLLVFFSRWWQLETLYRSNMKYQPEWVPRYACYEDARVIPRVGVASVIAEGFLVLPFSRRNRVHTGHHPAVPERLAATGLLHHDGSAPDVSGLRQVGLTNGDGVERRLPEQVRVRFDKLEKLRSSGIDAFPVGRPPSHTVAQALAADHQASVSVSGRIMRIRNYGGVLFAQLRDWSGEMQVLLDNSRLDQGCAADFNAATDLGDLVEMTGHMGASKTGTPSLIVSGWRLIGKCLRPLPNKWKGLLDPEARVRTRYLDLAVNAESRALITARSSVLRAVRETLFAKGFVEVETPILQQLHGGATARPFVTHINTYSMDLFLRIAPELYLKRLCVGGVERVFELGRAFRNEGVDFSHNPEFTLLEAYQAHADYLEWIDGCRELIQNAAQAANGAPIAMRPRTDKGSDGTRHHLEPVDISGIWPVRTVHDAISEALGERIDADTGLTTLRKLCDAAGVPYRTQWDAGAVVLELYEHLVECRTEQPTFYIDFPTSVSPLTRPHRSKRGVAERWDLVAWGIELGTAYSELTDPVEQRRRLQEQSLLAAGGDPEAMELDEDFLQAMEYAMPPTGGLGMGIDRVVMLITGRSIRETLPFPLAKPH", - "output": "cytosol ; plasma membrane ; ATP binding ; DNA binding ; lysine-tRNA ligase activity ; lysyltransferase activity ; magnesium ion binding ; tRNA binding ; lysyl-tRNA aminoacylation ; phosphatidylglycerol metabolic process ; phospholipid biosynthetic process ; response to antibiotic" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MAIVGTIIKIIKAIIDIFAK", - "output": "killing of cells of another organism" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MKEGIHPEYHEITVTCSCGNEFKTRSVLSKPLHIEVCSSCHPFYTGKQKIVDTAGRVEKFNQKYGRHLQKQAQT", - "output": "ribonucleoprotein complex ; ribosome ; metal ion binding ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MKVLFVIGSGAKHLEEEISRHGNLINVEIKKFPDGEKYVRVLERGKEAIVIQSTYHPQDENLIEALLLGDALSEAGFKKLKIVIPYLAYSRQDRVTKEGEPISVRAIMKMLGLYYDELYVFDIHNPKTLEHFPGIAKNIYPAEAIANYFKDKLGEGLILAPDKGALERAKRVAEVLGLEYSHFEKERISPTEVRMKPVDVDVNGKNVLIVDDIISTGGTMIKAANILRELGAKEIFVVATHGVFAEGAIERVSKAVNELAVTNTIPTEVSKISIVDYIVKLGEKE", - "output": "cytoplasm ; ATP binding ; kinase activity ; magnesium ion binding ; ribose phosphate diphosphokinase activity ; 5-phosphoribose 1-diphosphate biosynthetic process ; nucleotide biosynthetic process ; phosphorylation ; ribonucleoside monophosphate biosynthetic process" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MVDQLQHATEALRKALVQVERLKRTNRALLERSSEPIAIVGMSCRFPGGVDSPEGLWQMVADARDVMSEFPTDRGWDLAGLFDPDPDVRHKSYARTGGFVDGVADFDPAFFGISPSEALAMDPQHRMLLELSWEALERAGIDPTGLRGSATGVFAGLIVGGYGMLAEEIEGYRLTGMTSSVASGRVAYVLGLEGPAVSVDTACSSSLVALHMAVGSLRSGECDLALAGGVTVNATPTVFVEFSRHRGLAPDGRCKPYAGRADGVGWSEGGGMLVLQRLSDARRLGHPVLAVVVGSAVNQDGASNGLTAPNGPSQQRVVRAALANAGLSAAEVDVVEGHGTGTTLGDPIEAQALLATYGQDRGEPGEPLWLGSVKSNMGHTQAAAGVAGVIKMVLAMRHELLPATLHVDVPSPHVDWSAGAVELLTAPRVWPAGARTRRAGVSSFGISGTNAHVIIEAVPVVPRREAGWAGPVVPWVVSAKSESALRGQAARLAAYVRGDDGLDVADVGWSLAGRSVFEHRAVVVGGDRDRLLAGLDELAGDQLGGSVVRGTATAAGKTVFVFPGQGSQWLGMGIELLDTAPAFAQQIDACAEAFAEFVDWSLVDVLRGAPGAPGLDRVDVVQPVLFAVMVSLAELWKSVAVHPDAVIGHSQGEIAAAYVAGALSLRDAARVVTLRSKLLAGLAGPGGMVSIACGADQARDLLAPFGDRVSIAVVNGPSAVVVSGEVGALEELIAVCSTKELRTRRIEVDYASHSVEVEAIRGPLAEALSGIEPRSTRTVFFSTVTGNRLDTAGLDADYWYRNVRQTVLFDQAVRNACEQGYRTFIESSPHPALITGVEETFAACTDGDSEAIVVPTLGRGDGGLHRFLLSAASAFVAGVAVNWRGTLDGAGYVELPTYAFDKRRFWLSAEGSGADVSGLGLGASEHPLLGAVVDLPASGGVVLTGRLSPNVQPWLADHAVSDVVLFPGTGFVELAIRAGDEVGCSVLDELTLAAPLLLPATGSVAVQVVVDAGRDSNSRGVSIFSRADAQAGWLLHAEGILRPGSVEPGADLSVWPPAGAVTVDVADGYERLATRGYRYGPAFRGLTAMWARGEEIFAEVRLPEAAGGVGGFGVHPALLDAVLHAVVIAGDPDELALPFAWQGVSLHATGASAVRARIAPAGPSAVSVELADGLGLPVLSVASMVARPVTERQLLAAVSGSGPDRLFEVIWSPASAATSPGPTPAYQIFESVAADQDPVAGSYVRSHQALAAVQSWLTDHESGVLVVATRGAMALPREDVADLAGAAVWGLVRSAQTEHPGRIVLVDSDAATDDAAIAMALATGEPQVVLRGGQVYTARVRGSRAADAILVPPGDGPWRLGLGSAGTFENLRLEPVPNADAPLGPGQVRVAMRAIAANFRDIMITLGMFTHDALLGGEGAGVVVEVGPGVTEFSVGDSVFGFFPDGSGTLVAGDVRLLLPMPADWSYAEAAAISAVFTTAYYAFIHLADVQPGQRVLIHAGTGGVGMAAVQLARHLGLEVFATASKGKWDTLRAMGFDDDHISDSRSLEFEDKFRAATGGRGFDVVLDSLAGEFVDASLRLVAPGGVFLEMGKTDIRDPGVIAQQYPGVRYRAFDLFEPGRPRMHQYMLELATLFGDGVLRPLPVTTFDVRRAPAALRYLSQARHTGKVVMLMPGSWAAGTVLITGGTGMAGSAVARHVVARHGVRNLVLVSRRGPDAPGAAELVAELAAAGAQVQVVACDAADRAALAKVIADIPVQHPLSGVIHTAGALDDAVVMSLTPDRVDVVLRSKVDAAWHLHELTRDLDVSAFVMFSSMAGLVGSSGQANYAAANSFLDALAAHRRAHGLPAISLGWGLWDQASAMTGGLDAADLARLGREGVLALSTAEALELFDTAMIVDEPFLAPARIDLTALRAHAVAVPPMFSDLASAPTRRQVDDSVAAAKSKSALAHRLHGLPEAEQHAVLLGLVRLHIATVLGNITPEAIDPDKAFQDLGFDSLTAVEMRNRLKSATGLSLSPTLIFDYPTPNRLASYIRTELAGLPQEIKHTPAVRTTSEDPIAIVGMACRYPGGVNSPDDMWDMLIQGRDVLSEFPADRGWDLAGLYNPDPDAAGACYTRTGGFVDGVGDFDPAFFGVGPSEALAMDPQHRMLLELSWEALERAGIDPTGLRGSATGVFAGVMTQGYGMFAAEPVEGFRLTGQLSSVASGRVAYVLGLEGPAVSVDTACSSSLVALHMAVGSLRSGECDLALAGGVTVNATPDIFVEFSRWRGLSPDGRCKAFAAAADGTGFSEGGGMLVLQRLSDARRLGHPVLAVVVGSAVNQDGASNGLTAPNGPSQQRVVRAALANAGLSAAEVDVVEGHGTGTTLGDPIEAQALLATYGQDRGEPGEPLWLGSVKSNMGHTQAAAGVAGVIKMVLAMRHELLPATLHVDVPSPHVDWSAGAVELLTAPRVWPAGARTRRAGVSSFGISGTNAHVIIEAVPVVPRREAGWAGPVVPWVVSAKSESALRGQAARLAAYVRGDDGLDVADVGWSLAGRSVFEHRAVVVGGDRDRLLAGLDELAGDQLGGSVVRGTATAAGKTVFVFPGQGSQWLGMGMGLHAGYPVFAEAFNTVVGELDRHLLRPLREVMWGHDENLLNSTEFAQPALFAVEVALFRLLGSWGVRPDFVMGHSIGELSAAHVAGVLSLENAAVLVAARGRLMQALPAGGAMVAVQAAEEEVRPLLSAEVDIAAVNGPASLVISGAQNAVAAVADQLRADGRRVHQLAVSHAFHSPLMDPMIDEFAAVAAGIAIGRPTIGVISNVTGQLAGDDFGSAAYWRRHIRQAVRFADSVRFAQAAGGSRFLEVGPSGGLVASIEESLPDVAVTTMSALRKDRPEPATLTNAVAQGFVTGMDLDWRAVVGEAQFVELPTYAFQRRRFWLSGDGVAADAAGLGLAASEHALLGAVIDLPASGGVVLTGRLSPSVQGWLADHSVAGVTIFPGAGFVELAIRAGDEVGCGVVDELTLAAPLVLPASGSVAVQVVVNGPDESGVRGVSVYSRGDVGTGWVLHAEGALRAGSAEPTADLAMWPPAGAVPVEVADGYQQLAERGYGYGPAFRGLTAMWRRGDEVFAEVALPADAGVSVTGFGVHPVLLDAALHAVVLSAESAERGQGSVLVPFSWQGVSLHAAGASAVRARIAPVGPSAVSIELADGLGLPVLSVASMLARPVTDQQLRAAVSSSGPDRLFEVTWSPQPSAAVEPLPVCAWGTTEDSAAVVFESVPLAGDVVAGVYAATSSVLDVLQSWLTRDGAGVLVVMTRGAVALPGEDVTDLAGAAVWGLVRSAQTEHPGRIVLVDSDAPLDDSALAAVVTTGEPQVLWRRGEVYTARVHGSRAVGGLLVPPSDRPWRLAMSTAGTFENLRLELIPDADAPLGPGQVRVAVSAIAANFRDVMIALGLYPDPDAVMGVEACGVVIETSLNKGSFAVGDRVMGLFPEGTGTVASTDQRLLVKVPAGWSHTAAATTSVVFATAHYALVDLAAARSGQRVLIHAGTGGVGMAAVQLARHLGLEVFATASKGKWDTLRAMGFDDDHISDSRSLEFEDKFRAATGGRGFDVVLDSLAGEFVDASLRLVAPGGVFLEMGKTDIRDPGVIAQQYPGVRYRAFDLFEPGPDRIAQILAELATLFGDGVLRPLPVTTFDVRCAPAALRYLSQARHTGKVVMLMPGSWAAGTVLITGGTGMAGSAVARHVVARHGVRNLVLVSRRGPDAPGAAELVAELAAAGAQVQVVACDAADRAALAKVIADIPVQHPLSGVIHTAGALDDAVVMSLTPDRVDVVLRSKVDAAWHLHELTRDLDVSAFVMFSSMAGLVGSSGQANYAAANSFLDALAAHRRAHGLPAISLGWGLWDQASAMTGGLATVDFKRFARDGIVAMSSADALQLFDTAMIVDEPFMLPAHIDFAALKVKFDGGTLPPMFVDLINAPTRRQVDDSLAAAKSKSALLQRLEGLPEDEQHAVLLDLVRSHIATVLGSASPEAIDPDRAFQELGFDSLTAVEMRNRLKSATGLALSPTLIFDYPNSAALAGYMRRELLGSSPQDTSAVAAGEAELQRIVASIPVKRLRQAGVLDLLLALANETETSGQDPALAPTAEQEIADMDLDDLVNAAFRNDDE", - "output": "3-oxoacyl- synthase activity ; fatty acid synthase activity ; identical protein binding ; oxidoreductase activity ; phosphopantetheine binding ; fatty acid biosynthetic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MPADLSGTWNLLSSDNFEGYMLALGIDFATRKIAKLLKPQKVIEQNGDSFTIQTCSSLRNYLVKFKVGEEFEEDNKGLDNRKCTSLVTWENDKLTCVQRGEKKNRGWSHWIEGDQLHLEMFCEGQVCKQTFQRA", - "output": "cytosol ; nucleus ; fatty acid binding ; retinal binding ; retinoid binding ; retinol binding ; fatty acid transport" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MNATTINSLFLIGALLVSASILVSSLSSRLGIPILVIILAVGMVAGVDGGGIIFDNYPTAYLVGNLALAVILLDGGLRTRVASFRVALWPALSLATVGVLITTGLTGMAAAWLFDLNIIQGLLIGAIVGSTDAAAVFSLLGGKGLNERVTASLEIESGSNDPMAVFLTVTLIDMLASGQTGLHWSLLTHLVREFGIGGVVGLGGGWLMLQMVNRINLATGLYPILVIAGGLFVFAVTNALHGSGFLAVYLCGLVIGNRPVRSRHGILHMLDGMAWLAQIGMFLVLGLLVTPHDLLPIALPALGLALWMILFARPLSVMVGLLPFKAFHGREKAFIAWVGLRGAVPIILAVFPLMAGLPHAQLYFNLAFFIVLVSLLVQGTSLPWVAKLLKVTVPPDPAPISRAALEVHVTSEWELFVYRLGAEKWCIGAALRELKMPEGTRIAALFRGQQLLHPSGSTVLEVGDLLCVIGHEHNLPALGKLFSQAPQRGLDLRFFGDFVLEGDAQLGAVSALYGLKLEGIDPDMPLSRFITQKVGGAPVVGDQVEWNNTIWTVAVMDGNKIGKVGVRFPEGSRPGPGLFL", - "output": "plasma membrane ; flavin adenine dinucleotide binding ; potassium:proton antiporter activity ; cell volume homeostasis" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MNIKLIAIGKTDNKSLQTLIDDYTKRLSFYIKFDLEIIPDIKNVKNLSESQQKEKEGELILSKLSATDQLILLDENGKTFSSVGFSEELQKKMNSGVKTLVFVIGGPYGFSETIYKKAQGKVSLSLMTFSHQMVRLFFIEQLYRGFTILRNEPYHHQ", - "output": "cytoplasm ; rRNA (pseudouridine-N3-)-methyltransferase activity" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MLDVKSQDISIPEAVVVLCTAPDEATAQDLAAKVLAEKLAACATLLPGATSLYYWEGKLEQEYEVQMILKTTVSHQQALIDCLKSHHPYQTPELLVLPVTHGDTDYLSWLNASLR", - "output": "cytoplasm ; copper ion binding ; response to metal ion" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MQYYKELARRLHTLQSKNEKEALEKQIDFLDKLVVEVDSLVHEQDLRPLLEFISPTESWFLLGTATIFYIKLLTHPDPESIDVVIKEAYVVRAHRILSIFQEQFIENVVKEINWEILAILISLSGIENGLVRNLSEFLSTSILSAVPRQKFLLYLLEKYQINLFHREERLTDQGRPVAFELPPDKFHSDQSKALLEPKWKTKNYLISHLIFWIIDQQSSSSIEVCWHRIIPSVLRILNDLSPNIKLQGIELVNRLLKITEREFLLYTGILKILKDDLLVFYTFIPPRFTIQTSVTLINASFATLVSLYPEENENLNSIMLNGINSVFQFAFDYPLILQAAFSQIMVLTDKMNVSYLPYLTLTLDELCRIIQNPQIIQIPSTLSFFLEILTKLLEIYSYRISAHHVELLMALVVCSRNYMRCNLQEHHNAIVQALQNLFTLIKLNITVEQLGDYNVILPLLEPLQIPL", - "output": "ASTRA complex ; cytosol ; nucleus ; TTT complex ; chromatin remodeling" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MILEHVLVLSAYLFFIGLYGLITSRNMVRALMCLELILNAVNMNFVTFSDFFDNSQLKGDIFCIFVIAIAAAEAAIGLAIVSSIYRNRKSTRINQSTLLNK", - "output": "chloroplast thylakoid membrane ; oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor ; quinone binding ; ATP synthesis coupled electron transport ; photosynthesis, light reaction" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MADEEAGGTERMEISAELPQTPQRLASWWDQQVDFYTAFLHHLAQLVPEIYFAEMDPDLEKQEESVQMSIFTPLEWYLFGEDPDICLEKLKHSGAFQLCGRVFKSGETTYSCRDCAIDPTCVLCMDCFQDSVHKNHRYKMHTSTGGGFCDCGDTEAWKTGPFCVNHEPGRAGTIKENSRCPLNEEVIVQARKIFPSVIKYVVEMTIWEEEKELPPELQIREKNERYYCVLFNDEHHSYDHVIYSLQRALDCELAEAQLHTTAIDKEGRRAVKAGAYAACQEAKEDIKSHSENVSQHPLHVEVLHSEIMAHQKFALRLGSWMNKIMSYSSDFRQIFCQACLREEPDSENPCLISRLMLWDAKLYKGARKILHELIFSSFFMEMEYKKLFAMEFVKYYKQLQKEYISDDHDRSISITALSVQMFTVPTLARHLIEEQNVISVITETLLEVLPEYLDRNNKFNFQGYSQDKLGRVYAVICDLKYILISKPTIWTERLRMQFLEGFRSFLKILTCMQGMEEIRRQVGQHIEVDPDWEAAIAIQMQLKNILLMFQEWCACDEELLLVAYKECHKAVMRCSTSFISSSKTVVQSCGHSLETKSYRVSEDLVSIHLPLSRTLAGLHVRLSRLGAVSRLHEFVSFEDFQVEVLVEYPLRCLVLVAQVVAEMWRRNGLSLISQVFYYQDVKCREEMYDKDIIMLQIGASLMDPNKFLLLVLQRYELAEAFNKTISTKDQDLIKQYNTLIEEMLQVLIYIVGERYVPGVGNVTKEEVTMREIIHLLCIEPMPHSAIAKNLPENENNETGLENVINKVATFKKPGVSGHGVYELKDESLKDFNMYFYHYSKTQHSKAEHMQKKRRKQENKDEALPPPPPPEFCPAFSKVINLLNCDIMMYILRTVFERAIDTDSNLWTEGMLQMAFHILALGLLEEKQQLQKAPEEEVTFDFYHKASRLGSSAMNIQMLLEKLKGIPQLEGQKDMITWILQMFDTVKRLREKSCLIVATTSGSESIKNDEITHDKEKAERKRKAEAARLHRQKIMAQMSALQKNFIETHKLMYDNTSEMPGKEDSIMEEESTPAVSDYSRIALGPKRGPSVTEKEVLTCILCQEEQEVKIENNAMVLSACVQKSTALTQHRGKPIELSGEALDPLFMDPDLAYGTYTGSCGHVMHAVCWQKYFEAVQLSSQQRIHVDLFDLESGEYLCPLCKSLCNTVIPIIPLQPQKINSENADALAQLLTLARWIQTVLARISGYNIRHAKGENPIPIFFNQGMGDSTLEFHSILSFGVESSIKYSNSIKEMVILFATTIYRIGLKVPPDERDPRVPMLTWSTCAFTIQAIENLLGDEGKPLFGALQNRQHNGLKALMQFAVAQRITCPQVLIQKHLVRLLSVVLPNIKSEDTPCLLSIDLFHVLVGAVLAFPSLYWDDPVDLQPSSVSSSYNHLYLFHLITMAHMLQILLTVDTGLPLAQVQEDSEEAHSASSFFAEISQYTSGSIGCDIPGWYLWVSLKNGITPYLRCAALFFHYLLGVTPPEELHTNSAEGEYSALCSYLSLPTNLFLLFQEYWDTVRPLLQRWCADPALLNCLKQKNTVVRYPRKRNSLIELPDDYSCLLNQASHFRCPRSADDERKHPVLCLFCGAILCSQNICCQEIVNGEEVGACIFHALHCGAGVCIFLKIRECRVVLVEGKARGCAYPAPYLDEYGETDPGLKRGNPLHLSRERYRKLHLVWQQHCIIEEIARSQETNQMLFGFNWQLL", - "output": "cytoplasm ; cytosol ; proteasome complex ; ubiquitin ligase complex ; leucine binding ; ubiquitin protein ligase activity ; zinc ion binding ; cellular response to leucine ; negative regulation of TOR signaling ; protein ubiquitination ; ubiquitin-dependent protein catabolic process via the N-end rule pathway" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MPRRREVAKRVILPDPKFNDRVVAKLVSVIMLDGKKSTAERALYGALDIVSQKAGEEPVKVLKKCLDNIKPMLGVKSRRVGGSTYQVPVEVRADRRVSLAMRWLVRYANERSEKTITDKLAGEILDAYNNRGAAVKKREDTHRMAEANRAFAHYRW", - "output": "cytosolic small ribosomal subunit ; ribosome ; mRNA binding ; rRNA binding ; structural constituent of ribosome ; tRNA binding ; ribosomal small subunit assembly ; translation" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MAGPVSLRELLMGASAWLGSESPGGPSAEGGGNAAGTPEPPWREDEICVVGIFGKTALRLNSEKFSLVNTVCDRQVFPLFHHQDPGDPGTGIKTKAVSVGEAGGAGDPGAAAGDSLRGGMATAEGNRAEPGPQDFSLLQAYYNQESKVLYLILTSICDNSQLLRACRALQSGEAGGGLSLPHAETHEFWKHQEKLQCLSLLYLFSVCHILLLVHPTCSFDITYDRVFRALDGLRQKVLPLLKTAIKDCPVGKDWKLNCRPCPPRLLFLFQLNGALKVEPPRSQDTAHPDKPKKHSPKRRLQHALEDQIYRIFRKSRVLTNQSINCLFTVPANQAFVYIVPGSQEEDPIGMLLDQLRSHCTVKDPESLLVPAPLSGPRRYQAMRQHSRQQLSFHIDSSTSSSSGQLVDFTLREFLWQHVELVLSKKGFDDSVGRNPQPSHFELPTYQKWISAAAKLYEVAIDGKEEDLGSPTGELTSKILSSIKVLEGFLDIDTKFSENRCQKALPMAHSAYQSNLPHNYTMTVHKNQLAQALRVYSQHARGPAFHKYAMQLHEDCYKFWSNGHQLCEERSLTDQHCVHKFHSLPKSGEKPEADRNPPVLYHNSRARSTGACNCGRKQAPRDDPFDIKAANYDFYQLLEEKCCGKLDHINFPVFEPSTPDPAPAKNEPSPAPPDSDAEKLKEKEPQTQGESTSLSLALSLGQSTDSLGTYPADPQAGGDNPEVHGQGEGKSEKRPNLVDRQASTVEYLPGMLHSNCPKGLLPKFSSWSLVKLGPAKSYNFHTGLDQQGFVPGTNYLMPWDIVIRTRAEDEGDLDTNSWPAPNKAIPGKRSAVVMGRGRRRDDIARAFVGFEYEDSRGRRFMCSGPDKVMKVMGSGPKESALKALNSDMPLYILSSSQGRGLKPHYAQLMRLFVVVPDAPLQIILMPQVQPGPPPCPVFYPEKQEITLPPDGLWVLRFPYAYVTERGPCFPPKENVQLMSYKVLRGVLKAVTQ", - "output": "nuclear-transcribed mRNA catabolic process, nonsense-mediated decay ; regulation of protein kinase activity" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MLYLSEENKSVSTPCPPDKIIFDAERGEYICSETGEVLEDKIIDQGPEWRAFTPEEKEKRSRVGGPLNNTIHDRGLSTLIDWKDKDAMGRTLDPKRRLEALRWRKWQIRARIQSSIDRNLAQAMNELERIGNLLNLPKSVKDEAALIYRKAVEKGLVRGRSIESVVAAAIYAACRRMKLARTLDEIAQYTKANRKEVARCYRLLLRELDVSVPVSDPKDYVTRIANLLGLSGRVMKTAAEIIDKAKGSGLTAGKDPAGLAAAAIYIASLLHDERRTQKEIAQVAGVTEVTVRNRYKELTQELKISIPTQ", - "output": "DNA-binding transcription factor activity ; TBP-class protein binding ; transcription preinitiation complex assembly" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MRPIPSILGALGAFATLSAAAPLESTLYGPGASHARSMLGSSFGVPGNQTFDYVVIGGGTAGLAIASRLAEQGAGTVAVIEAGGFYELNNGNLSQIPANDAYYVGKDLDDWQPGVDWGFHTVPQAGAYGRASHYARGKCLGGSSARNYMAYQRGTKSSYQRWADMVGDQSYAWENFLPFFEKSLHFTPANDALRGANATVQYDPAVLGNGQGPLSVTYSHYVQSFATWAQKAFLEMGLAVRNCFQSGELLGQSFGMYTINATTMHRESSETSFLRRALAYPNFMVFQSTLAKRILFDGKKRAVAVQLDTQGYRYTLTARKEVVLSAGAFQSPQLLMVSGVGPAATLQQHGIPLVADRPGVGQNLQDHIIYAPSYRVDLITQSALLNATFEAQANRDYHERAAGIYANPTSDILAWEKIPEPKRSAWLSNTTRRALAQYPADWPEIEFLTMGGFFGYQNNYVRDNPSDGYNYASLAVSLCTPRSRGNVSIASADAAVPPLINPNWLTDPVDVELAVAAFKRARDFFGTSALKPVLIGDEYFPGERVATDAQIEDHVRKSFDTIFHASCTCAMGKREDQMAVVDSKARVIGVDALRVVDASAFPMLPPGHPQSTIYALAEKIACDISGAC", - "output": "cell cortex ; extracellular matrix ; extracellular region ; vacuole ; flavin adenine dinucleotide binding ; oxidoreductase activity ; oxidoreductase activity, acting on CH-OH group of donors ; patulin biosynthetic process" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MFNPHALDVPAVIFDNGSGLCKAGLSGEIGPRHVISSVLGHCKFNVPLARLNQKYFVGQEALYKYEALHLHYPIERGLVTGWDDMEKLWKHLFERELGVKPSQQPVLMTEPSLNPREIREKLAEMMFETFSVPGFYLSNHAVAALYASACVTGLVVDSGDGVTCTVPIFEGYSLPHAVTKLCMAGRDITEHLTRLLFASGFNFPCILNKAVVNNIKEKLCYIALEPEKELRKSRGEVLGAYRLPDGHVIHFGDELYQVPEVLFAPDQLGIHSPGLSKMVSSSIMKCDTDIQNKLYADIVLSGGTTLLPGLEERLMKEVEQLASKGTPIKITASPDRCFSAWIGASIMTSMSSFKQMWVTSADFKEYGTSVVQRRCF", - "output": "cytoplasm ; cytoskeleton ; nucleus ; chromatin binding ; negative regulation of DNA-templated transcription ; regulation of DNA-templated transcription ; regulation of smoothened signaling pathway" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MSEMTPREIVSELDSYIIGQHKAKRAVSIALRNRWRRMQLDEALRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEVDSIIRDLTDSAIKMVRHQSIEKNRFRAEEMAEDRILDVLIPPAKNNWGQAEGTQEPSATRQAFRKKLREGQLDDKEIEIDLAASPVGVEIMAPPGMEEMTNQLQSMFQNLAGQKQKAHKVKIKDAFKLLIEEEAAKLVNPEELKQQAIEAVEQHGIVFIDEIDKICKRGESSGPDVSREGVQRDLLPLVEGCTVSTKHGMVKTDHILFIASGAFQVASPSDLIPELQGRLPIRVELQALTTEDFERILTEPSASLTEQYKALMATEGVDISFTADGIRRIAEAAWQVNESTENIGARRLHTVMERLIEDVSYDASEMNGQSVIIDADYVRSHLDELVADEDLSRFIL", - "output": "HslUV protease complex ; ATP binding ; ATP hydrolysis activity ; peptidase activity ; proteasome-activating activity ; protein unfolding" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MRVLLACLLVCALVVSDSDGSNEVHKESGESNCGCLNGGKCVTYKYFSNIQRCSCPKKFQGEHCEIDTSKTCYQGNGHSYRGKANRDLSGRPCLAWDSPTVLLKMYHAHRSDAIQLGLGKHNYCRNPDNQRRPWCYVQIGLKQFVQFCMVQDCSVGKSPSSPREKEEFQCGQKALRPRFKIVGGQVTNAENQPWFAAIYRRHRGGSITYLCGGSLISPCWVVSATHCFIDHPKKENYIVYLGQSRLNSDTRGEMQFEVEKLILHEDYSAESLAHHNDIALLKIRTSRGQCAQPSRSIQTICLPPEHEDAHSRTRCEITGFGKENPSDYRYSDELKMTFVSLVSHEVCQQPHYYGAEVTDKMLCAADPQWETDSCQGDSGGPLVCTIQGRLTLTGIVSWGRDCAMKYKPGVYTRVSKFLPWINTHTRGEINLVL", - "output": "extracellular space ; serine-type endopeptidase activity ; fibrinolysis ; plasminogen activation ; regulation of cell adhesion mediated by integrin" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MFNEITKSVTWNGQVLELSTGKIARQADGAVTVKMGNSVLLCTAVVANKAKEGIGFLPLTINYREMAYAAGKIPGGFFKHEGKASDREVLVSRLIDRPIRPLFHPAFVNETHVTCSVLSYDPETPVDILAIIGASAALSLSPAPYLEIVAASKVGLINGEFVLNPTLALLKTSQLDLVVAGTSDSVMMVESEAHLLSEEQMLEAVKFGFESFQPVIKIIKELAEEAKKPKLEMQALYPASLKKEIEKLFVKEIEQAFAIKSKQERSTNLDLIPEKVLTHFVSDIENKKYSNYQIESALKAIESDILRNEILEKNRRIDGRSTTDIRQIACEIGLLPSAHGSALFTRGETQSLVSTTFGTSLDEQIVDSLEGEYKERFMLNYIFPPYSVNEAMPMKAPSRREVGHGKLAWRAINPILPNKVQFPYSIRVVAETTESNGSSSMATVCGSSLALMYAGVPIKAPVAGIAMGLVKEGKNFAVLSDILGDEDYFGDMDFKVAGTSEGITALQMDIKISGVDFKIMKVALEQARLGRLHILEQMNKVISKPNNELSKNAPSTTTIKIDKDKIRDIIGPGGKIIKEICETSGAKIDISDDGTVSVYASDRDKLKVALDKIKAIVVEPEIGEIFNGTVVKVLDSGAFINYVGNKDGFVHISEVSGERIETVSSVLKQGDIVKVKLIGFDNKGKAKLTIKNADKDKSSNNTKPKTNVNNTNKDNSEPEQRRDSSKKRAWNEDNNAETAEVITERKYFN", - "output": "cytoplasm ; magnesium ion binding ; polyribonucleotide nucleotidyltransferase activity ; RNA binding ; mRNA catabolic process ; RNA processing" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MAQKEGGRTVPCCSRPKVAALTAGTLLLLTAIGAASWAIVAVLLRSDQEPLYPVQVSSADARLMVFDKTEGTWRLLCSSRSNARVAGLSCVEMGFLRALTHSELDVRTAGANGTSGFFCVDEGRLPHTQRLLEVISVCDCPRGRFLATICQDCGRRKLPVDRIVGGRDTSLGRWPWQVSLRYDGAHLCGGSLLSGDWVLTAAHCFPERNRVLSRWRVFAGAVAQASPHGLQLAVQAVVYHGGYLPFRDPNSEENSNDIALVHLSSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQYYGQQAGVLQEARVPIISNDVCNGADFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGTGCALAQKPGVYTKVSDFREWIFQAIKTHSEASGMVTQL", - "output": "cell surface ; cell-cell junction ; cytoplasm ; endoplasmic reticulum membrane ; neuronal cell body ; plasma membrane ; serine-type endopeptidase activity ; serine-type exopeptidase activity ; serine-type peptidase activity ; basement membrane disassembly ; cochlea morphogenesis ; detection of mechanical stimulus involved in sensory perception of sound ; negative regulation of apoptotic process ; negative regulation of epithelial cell proliferation ; negative regulation of epithelial to mesenchymal transition ; pilomotor reflex ; positive regulation by host of viral transcription ; positive regulation of cell growth ; positive regulation of gene expression ; positive regulation of hepatocyte proliferation ; positive regulation of plasminogen activation ; positive regulation of thyroid hormone generation ; potassium ion transmembrane transport ; proteolysis ; regulation of cell shape ; response to thyroid hormone" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MAAKEVKFGDSARKKMLVGVNVLADAVKATLGPKGRNVVLEKSFGAPTITKDGVSVAKEIELKDRFENMGAQLVKDVASKANDEAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGIDKATIAIVAELKNLAKPCTDSKAIAQVGTISANSDSSIGDIIAEAMERVGKEGVITVEEGSGLENELSVVEGMQFDRGYLSPYFINKPDTMVAELDSPLLLLVDKKISNIRELLPVLEAVAKAGRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTVISEEVGLSLETATLEHLGNAKRVVLNKENTTIIDGAGQQADIEARVAQIRKQVEDTTSDYDKEKLQERLAKLAGGVAVIKVGAGTEVEMKEKKARVEDALHATRAAVEEGVVPGGGVAWVRALQAISELKGENEDQNVGIALLRRAVEAPLRQIVTNAGGEPSVVVDKVKQGEGNYGFNAASDTYGDMIEMGILDPAKVTRSALQAAASIGSLMITTEAMIAEVAEDKAAGGMPDMGGMGGMGGMGGMGGMM", - "output": "cytoplasm ; ATP binding ; ATP-dependent protein folding chaperone ; isomerase activity ; unfolded protein binding ; protein refolding" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MSLAKSAANKLDWAKVISSLRITGSTATQLSSFKKRNDEARRQLLELQSQPTEVDFSHYRSVLKNTSVIDKIESYVKQYKPVKIDASKQLQVIESFEKHAMTNAKETESLVSKELKDLQSTLDNIQSARPFDELTVDDLTKIKPEIDAKVEEMVKKGKWDVPGYKDRFGNLNVM", - "output": "mitochondrial inner membrane ; mitochondrial proton-transporting ATP synthase complex ; mitochondrial proton-transporting ATP synthase, stator stalk ; mitochondrion ; proton transmembrane transporter activity ; proton motive force-driven ATP synthesis" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MFLLYEYDIFWAFLIISSVIPIFAFIISGVLAPISKGPEKLSSYESGIEPMGDAWLQFRICYYMFALVFVVFDVETVFLYPWAMSFDILGVSVFIEALIFVLILIVGSIYAWRKGALEWS", - "output": "chloroplast thylakoid membrane ; NADH dehydrogenase (ubiquinone) activity ; quinone binding ; photosynthesis, light reaction" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MSVDLATVKRVARLARIAVSDEEAERMTGELNGILGFVEQLSEVDVDGVEPMTSVMPMKMKKRDDIVADGDKADDIVANAPNSDRNFFLVPKVVE", - "output": "asparaginyl-tRNA synthase (glutamine-hydrolyzing) activity ; ATP binding ; glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity ; regulation of translational fidelity ; translation" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MLAAKSIAGPRAFKASAVRAAPKAGRRTVVVMARKNEVSESYAKALVELADEKGKLEAVHADVDAVAGLMKENAKLSALIMNPVVESDKKRAVLAKIAKEAGFQQYTINWLNLLVEKDRLSLVPEICECFEDLYCQMTDTQVATLRSAVKLEQEQQFLIAKKLQELTGSKNIKLKPVIDSSLIAGFVVEYGSSQIDLSVRGQIERVADQLTKEMTAKLS", - "output": "chloroplast thylakoid membrane ; proton-transporting ATP synthase complex, catalytic core F(1) ; proton-transporting ATP synthase activity, rotational mechanism" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MTYKRVLLKLSGEALMGEKPYGIDPAIVQSIAEDVSKVVGNNIQLAIVVGGGNIFRGLKGSADGMDRATADYVGMLATVMNAISLQDGLERVGVATRVQTAIEMQEIAEPYIRRRAMRHLEKGRVVVFGGGCGNPFFTTDTTAALRAAEINAEVVMKATKVDGVYNCDPNKFQDAKKYTNLSYQQVLSDEIAVMDSTAIALCKDNNIPIMVFDIFKKGNISKAVAGEAIGSLIS", - "output": "cytoplasm ; ATP binding ; UMP kinase activity ; 'de novo' CTP biosynthetic process ; phosphorylation" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MKLIIGVITLFPQMFDALKSGVIGRALKQDRLTLSFWNPRDYATDPHRTVDDRPYGGGPGMVMKFEPLALALKAAKAQLGENTKVIHLTPQGKLLTQAIVREKIHASPLILLAGRYEGIDERLIEAEVDEEWSIGDYILSGGELPAMVLIDAMTRLLPGVLGHKDSASQDSFTAGLLDYLHYTRPEKIADRPVPSVLLSGDHEAISRWRLKQSLGRTWQRRQDLIKRRSLSENEQRLLDEFFEESS", - "output": "cytoplasm ; tRNA (guanine(37)-N(1))-methyltransferase activity" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MTQMTTADVPSMGRRQFMNLLTFGTVTGVALGALYPVAQYFTPYRAGGGGGGTNAKDELGNNVSASGWLSTHPVGDRSLVQGLKGDPTYLIVEGEDAITSYGINAICTHLGCVVPWNSGANKYMCPCHGSQYDSTGKVVRGPAPLSLAIAHVSIEDDQVLVSQWTETDFRTGTDPWWG", - "output": "intracellular membrane-bounded organelle ; plasma membrane-derived thylakoid membrane ; 2 iron, 2 sulfur cluster binding ; electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity ; metal ion binding ; plastoquinol--plastocyanin reductase activity ; photosynthesis" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MTAQIIDGKALAEELRQGFKARVEALTAKGHKPGLVVILVGADPASEVYVRNKVNGCLAIGMHSEKITYDATIDQATVLNKIAELNADPNIHGILVQLPLPKHFDEEAVLEAISAEKDVDGFHAENVGALAQGNPRFIPCTPYGVMKMFEKGNVDLTGKEAVVIGRSNIVGKPMALLLINAGATVTVCNSRTKDLKFHTSRADILVAAVGKPKFVTGDMVKPGAVVIDVGINRLPDGKLCGDVDFASCLEVAGQITPVPGGVGPMTITMLLANTIEAAERKAGL", - "output": "methenyltetrahydrofolate cyclohydrolase activity ; methylenetetrahydrofolate dehydrogenase (NADP+) activity ; histidine biosynthetic process ; methionine biosynthetic process ; purine nucleotide biosynthetic process ; tetrahydrofolate interconversion" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MTSMTPQEIVSELDKHIVGQSSAKRAVAIALRNRWRRQQVQGSLRQEITPKNILMIGPTGVGKTEIARRLAKLADAPFIKVEATKFTEVGYVGKDVDSIIRDLADMAVKQTRESEMKKVRARAEDAAEDRILDVLIPPPRGADGAEPAADGTTRQMFRKKLREGLLDDKDIEIDVTESRPHLEIMGPQGMEEMTEQLRSMFSQFGQDKRRTRKLKIAEAMKLLTDEEAGKLVNEEEIKTRALANAEQNGIVFIDEIDKVATRQETSGADVSRQGVQRDLLPLVEGTTVSTKYGMIKTDHILFIASGAFHLSRPSDLIPELQGRFPIRVELESLSVQDFEAILTQTHASLVKQYQALLATEDVTLAFVPQGITRLACIAFEVNERTENIGARRLSTVMERLLDEVSFDATRLSGQTVTIDEGYVDQRLQQLSLNEDLSRYIL", - "output": "HslUV protease complex ; ATP binding ; ATP hydrolysis activity ; peptidase activity ; proteasome-activating activity ; protein unfolding" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MPVYEHLLPVNGAWRQDVTNWLSEDVPSFDFGGYVVGSDLKEANLYCKQDGMLCGVPFAQEVFNQCELQVEWLFKEGSFLEPSKNDSGKIVVAKITGPAKNILLAERTALNILSRSSGIATASHKIISLARSTGYKGTIAGTRKTTPGLRRLEKYSMLVGGCDTHRYDLSSMVMLKDNHIWATGSITNAVKNARAVCGFAVKIEVECLSEDEATEAIEAGADVIMLDNFKGDGLKMCAQSLKNKWNGKKHFLLECSGGLNLDNLEEYLCDDIDIYSTSSIHQGTPVIDFSLKLAH", - "output": "cytoplasm ; nucleus ; nicotinate-nucleotide diphosphorylase (carboxylating) activity ; 'de novo' NAD biosynthetic process from tryptophan ; NAD biosynthetic process ; quinolinate catabolic process" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MSHAVKIYDTCIGCTQCVRACPLDVLEMVPWDGCKAGQIASSPRTEDCVGCKRCETACPTDFLSIRVYLGDETSRSMGLSY", - "output": "photosystem I ; plasma membrane-derived thylakoid membrane ; 4 iron, 4 sulfur cluster binding ; electron transfer activity ; metal ion binding ; photosynthetic electron transport in photosystem I" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MAKKSKIVKNQRRAATVARYASRRTALKDIIRSPSSAPEQRSTAQRALARQPRDASPVRLRNRDAIDGRPRGHLRKFGLSRVRVRQLAHDGHLPGVRKASW", - "output": "peptidoglycan-based cell wall ; small ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MSVRILVVDDDRAVRESLRRSLSFNGYSVELAHDGVEALDMIASDRPDALVLDVMMPRLDGLEVCRQLRGTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTKPEDAAESMAMRFSDLTLDPVTREVNRGQRRISLTRTEFALLEMLIANPRRVLTRSRILEEVWGFDFPTSGNALEVYVGYLRRKTEADGEPRLIHTVRGVGYVLRETPP", - "output": "cytosol ; peptidoglycan-based cell wall ; plasma membrane ; protein-DNA complex ; DNA binding ; phosphorelay response regulator activity ; transcription cis-regulatory region binding ; negative regulation of DNA-templated transcription ; phosphorelay signal transduction system ; positive regulation of DNA-templated transcription ; regulation of DNA-templated transcription ; response to alkaline pH" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MKKVEYWVKIPFGPIHPGLEEPEKFIITLDGERIVNVDVKLGYNLRGVQWIGMRRNYVQIMYLAERMCGICSFSHNHTYVRAVEEMAGIEVPERAEYIRVIVGELERIHSHLLNLGVVGHDIGYDTVLHLTWLARERVMDVLEAVSGNRVNYSMVTIGGVRRDIGEKQKRLILDMIKYYREVLPQIEDVFLHDSTIEARLRDVAVVPKKLAIEMGAVGPTARGSGIKEDSRWSEQLGVYPDLGIKPVTPEDVTGEKARGDVYDRMAVRIGELWMSLDLLEHALDQMPEGKIKTFPKDNILVAKLKLLGDGEGIGRYEAPRGELVHYVRGQKGRDGPVRWKPREPTFPNLFTIAKALEGNELADLVVAIASIDPCLSCTDRVAIVKEGKKVVLTEKDLLKLSIEKTKEINPNVKGDPTPTGIGCSRGV", - "output": "ferredoxin hydrogenase complex ; plasma membrane ; ferredoxin hydrogenase activity ; NAD binding ; nickel cation binding ; oxidoreductase activity, acting on NAD(P)H ; quinone binding ; proton motive force-driven ATP synthesis" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MLNMVQSNPKGVEKTASKSEQDAWTLASARLLYDLPFNDLLFEAQNVHRANFDPNRVQLSKLLNIKTGGCPEDCGYCSQSAHHASGLKASKLMSLDTVLEEAQKAKDSGATRYCMGAAWRSPKPRDEPAIAEMVKQVKALGLETCMTLGMLSPDQAQTFAEAGLDYYNHNIDTSERFYPQVITTRSFDDRLETLAHVREAGIKVCSGGILGLGETEDDRIDMLVTLANLPTPPESVPINMLIPMPGSRLEKASPVDPIAFVRIIALARLMMPQSHVRLTAGRNSMSDEMQALCFFAGANSIFIGDTLLTAANPGEDRDTSLMRRLGLTADTLDNHA", - "output": "2 iron, 2 sulfur cluster binding ; 4 iron, 4 sulfur cluster binding ; biotin synthase activity ; iron ion binding ; biotin biosynthetic process" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MENRLINPVERVDDSVDNNIRPSTLAEYIGQPVVREQMEVFIEAARRRNEALDHTLIFGPPGLGKTTLANIIAREMGGNLRSTSGPVLERAGDLAAMLTNLEEGDVLFIDEIHRLSPVIEEILYPAMEDFQLDIMIGEGPAARSIKLDLPPFTLVAATTRAGLLTSPLRDRFGIVQRLEFYNIEDLTTIVSRSARLMNVVMTPEGAVEVARRSRGTPRIANRLLRRVRDYAQVKSNGEVTGEIADSALDMLAVDRRGLDHLDRRYIEMVHARFDNGPAGVEAIAAAMAEDRGTLEDVIEPYLIQQGYVLRTARGRVLTQMAIDQL", - "output": "cytoplasm ; ATP binding ; ATP hydrolysis activity ; DNA binding ; four-way junction helicase activity ; DNA recombination ; DNA repair ; SOS response" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MTERKGMEEINREEFQEVVVNVGRVTKVVKGGRRFRFNALVVVGNKNGLVGFGLGKAKEVPDAIKKAVDDAFKNLIHVTIKGTTIAHDIEHKYNASRILLKPASEGTGVIAGGSTRPIVELAGIKDILTKSLGSNNPYNVVHATFDALAKIKA", - "output": "small ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MLQPARRKYRKEQKGRNTGISHSRGTAVSFGEFGLKAIGRGRITARQIEAARRAMTRHIKRGGRIWIRIFPDKPISQKPAEVRMGNGKGNPEYYVAEIQPGKMLYEMDGVDEALAREAFRLAAAKLPLLTTFVVRQVGQ", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; tRNA binding ; translation" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MSKLSRKQQTQKRHKRLRRNLSGTESRPRLAVFRSNNHIYAQIIDDDAQNTICAASTLDKDLKASLKVNAGSCDASTAVGELVAKKALSKGIKQVIFDRGGNIYHGRVKALAEAARVAGLNF", - "output": "cytoplasm ; ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MPLLDSFTVDHTRMNAPAVRVAKHMSTPSGDAITVFDLRFCAPNKDILSERGIHTLEHLFAGFMREHLNGDGIEIIDISPMGCRTGFYMSLIGQPTESKVADSWLAAMVDVTNVIDQKDIPELNEYQCGTYEMHSLEQAQDIARMIIAAGVSVNQNDDLKLSDEILGNL", - "output": "iron ion binding ; S-ribosylhomocysteine lyase activity ; quorum sensing" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MKIVKISPRGYCYGVVDAMVIARNAALDTSLPRPIYILGMIVHNKHVTDAFEEDGIITLDGPSRLDILDKIDSGTVIFTAHGVSPEVKQRAKEKGLTTIDATCPDVTKTHDLIEAKKAEGYHVIYIGKKNHPEPEGAVGIAPDIVHLIEKADDLKTLEIPTDKILVTNQTTMSQWDVQHLMEDIQKKFPTAEFHKEICLATQVRQEAVAKQADVADLTIVVGDPKSNNSNRLAQVSQEIAGTKAYRVADVSEIKLEWLQGVENVAVTAGASTPTPITKEVIAFLEQYDPMNPATWERVRKVPLQKILPRVKVKKEQ", - "output": "4 iron, 4 sulfur cluster binding ; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity ; metal ion binding ; dimethylallyl diphosphate biosynthetic process ; isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway ; terpenoid biosynthetic process" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MARIAYSTKIEGDNLARGKANELSISPKHSIEIADFIRHQRVNDALAYLADVVALKKAIPFRHFNRNVAHKRGLPGNWDAGRYPVKASKAYIRILESIKKNAEYTGLDTENLEIIHASANRGRAQKAYFPRAMGRASPKVRETVNIEIVVREVA", - "output": "large ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MGFWLSLCGAVVLVAYLLGSFPTGYIAVKQLKGIDIREVGSGSTGATNVLRTLGKGPGAFVLGLDCLKGVLAIALVYYLFTFASNQNLIPTTVNIELWQPWLVTLAGIAAILGHSKSIFLGFTGGKSVATSLGILLAMNWQVGLATFGVFAVVVAISRIVSLSSIMGAIAVSIVMVFLQQPLPYILFGIAGGLYVILRHRSNIERLLAGTEPKIGQKLVTETEQSA", - "output": "plasma membrane ; acyl-phosphate glycerol-3-phosphate acyltransferase activity ; phospholipid biosynthetic process" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MPTVEVFNKEGKKVEDIELSEKVFGAKISESALHQVVVAQLANKRQGTQSAKTRTEVSGGGIKPWRQKGTGRARQGSIRAPQWIHGGVVFAPKPRDYRISIPKSMRRTAMLSALTSKVNDKEMIVLDELKIDAPKTKEIVKMLNAFEAKKALIVVAESDQNVYKSVRNIQGAAVIPANNLNVYDILKYDKFIVTKEAVSKIEEVYA", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MSRHVFLTGPPGVGKTTLIQKAIEVLQSSGLPVDGFYTQEVRQEGKRIGFDVVTLSGAQGPLSRVGSQPLPGKPECRVGQYVVNLDSFEQLALPVLRNAGSSCGPKHRVCIIDEIGKMELFSQPFIQAVRQMLSTPGIIVVGTIPVPKGKPLALVEEIRKRRDVKVFNVTRDNRNSLLPDIVAVVQSSRT", - "output": "ATP binding ; ATP hydrolysis activity ; CTPase activity ; GTPase activity ; ribonucleoside triphosphate phosphatase activity" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MGGASACIPLCLLLATARMARPQTPERPVFTCGGILTGESGFIGSEGFPGMYPPNSKCTWKITVPEGKVVVLNFRFIDLENDNLCRYDFVDVYNGHANGQRIGRFCGTFRPGSLVASGNKMTVQMISDANTAGSGFMATYSAAAPDGKGDRYCGGRLEKPSGTFKTPNWPDRDYPVGVTCVWHIIAPKNQLIELKFEKFDVERDNYCRYDYVAVFNGGEVNDAKRIGKYCGDSPPVPIVSERNELLIQFLSDLSLTADGFIGHYKFRPKKFPTTTTTPVTTTLPVTTGLKPTVALCQQKCRRMGTLESNYCSSNFVLAGTVITTVTRGGSLHATVSIISIYREGNLAIQQAGKNMSVKLTVVCRQCPLLRRGLNYIIMGQVGEDGRGKIMPNSFVKMFKNKNQKPMNALKNKQC", - "output": "collagen-containing extracellular matrix ; extracellular region ; collagen binding ; heparin binding ; peptidase activator activity ; cellular response to leukemia inhibitory factor" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MPPPQKIPSVRPFKQRKSLAIRQEEVAGIRAKFPNKIPVVVERYPRETFLPPLDKTKFLVPQELTMTQFLSIIRSRMVLRATEAFYLLVNNKSLVSMSATMAEIYRDYKDEDGFVYMTYASQETFGCLESAAPRDGSSLEDRPCNPL", - "output": "autophagosome ; autophagosome membrane ; cytoplasmic ribonucleoprotein granule ; cytoplasmic vesicle ; cytosol ; endomembrane system ; microtubule ; organelle membrane ; ubiquitin protein ligase binding ; aggrephagy ; autophagosome assembly ; autophagosome maturation ; autophagy of mitochondrion ; cellular response to nitrogen starvation ; cellular response to starvation ; macroautophagy ; protein exit from endoplasmic reticulum" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MFLLHEYDIFWAFLIISSVIPILAFLISGVLAPISEGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGALEWS", - "output": "chloroplast thylakoid membrane ; NADH dehydrogenase (ubiquinone) activity ; quinone binding ; photosynthesis, light reaction" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MLEEINYDTKLFGLIGKNIKYTLSPYIHNFSFTTLGINAVYLVFDLDEMKFNRIINGLLEIAEGLNVTIPYKEEVMKYLDNTDTYSTRIQAVNTIYKKSGYNTDYLAIKNLVRKKIGNMSGYECYVYGAGGAAKAAAFALSELGCSSISIVNRTNLRANELVELLNKNGYNASIKENCNSTSNIVVVNSTPNPSVVPENCIQKSELVIEFVYKPVETELIKNAKKYGIKYIDGLEILVNQAVEAEKIWFNKSVSDEKIIEYLYARKLVW", - "output": "shikimate 3-dehydrogenase (NADP+) activity ; amino acid biosynthetic process ; aromatic amino acid family biosynthetic process ; chorismate biosynthetic process" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MIVYSLLLLILYDFLPKVVTFDTVCIGLCHCVGNVVDCSSLDLSEIPTTIPNNTRILLLSDNEIESIDKSRLKGFYFLQTLDISNNIIRHIDFEFFYNLPNLKILNIRKNRLARIPRGSHELGHLEKLDLRSNLISTVTSEELSYLAAVRSVDLSRNLISYLPKPTTSAKVNIEKLDLASNSITDIGTDHFSSFNTLVTLKLARNHITTLNQFSFSRLRKLESLDLTRNMIREVRFLAFNQLPSLQNVSLARNDVYRLDDGMFYACEGLKHLNLSTNRVQAVTEGWMFGLTSLEVLDLSYNQIQSFHISSWSHTPKLKWLSLHSNRIQSLPSGSFRVLRQLEELILSANSIDSLHKFALVGMSSLHKLDLSSNTLAVCVEDGAVLYNTSMPFLRSLRFTNNQLRVIPKRAFERFPALEELDLTDNPIATIHPEAFEPLELKRLVMNSSSILCDCQISWLASWIYRLKLDKSSIIAKCSYPPPLADLYVVAIDTANLTCHNDSPRAKIVRQPVEVSTLIGEKARFTCNVYGASPLSIEWRVMENGQPRVLVQDSATFLSINRTAVVNGTFDERELAAAELLLDNVAMTDNSEYQCVARNRFGSDFSTHVKLQVYQAPKFTYTPEDMPLLVGQTAKFLCAATGTPRPEIKWAFEQIPFPAAEARRLYVTPNDDHIYIMNVTKEDQGAYTCHATNVAGQTQASANLIVFENFFHYPESPDLSPMLIKKRDALKIDCSCDLISSRQRMVWKRQQQVILFLKKAKFSDNDQILTLTQTTFSDSGEYSCELWVDDTILMRKITMVKVVNEDEFVSSEATLTQRVQRIRAMASKLVDNIKSTGNGIYLMASCSAFGLMILGVITSICICIAKCSCNQNHVFNVLPVQV", - "output": "cytoplasmic vesicle membrane ; plasma membrane ; type I transforming growth factor beta receptor binding ; type II transforming growth factor beta receptor binding ; positive regulation of multicellular organism growth ; positive regulation of transforming growth factor beta receptor signaling pathway ; regulation of mesodermal cell fate specification ; transforming growth factor beta receptor signaling pathway" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MSTNSFHDYVDLKSRTNTRQFSDDEEFTTPPKLSNFGSALLSHTEKTSASEILSSHNNDKIANRLEEMDRSSSRSHPPPSMGNLTSGHTSTSSHSTLFGRYLRNNHQTSMTTMNTSDIEINVGNSLDKSFERIRNLRQNMKEDITAKYAERRSKRFLISNRTTKLGPAKRAMTLTNIFDEDVPNSPNQPINARETVELPLEDSHQTNFKETKRNTDYDSIDFGDLNPIQYIKKHNLPTSDLPLISQIYFDKQREENRQAALRKHSSRELLYKSRSSSSSLSSNNLLANKDNSITSNNGSQPRRKVSTGSSSSKSSIEIRRALKENIDTSNNSNFNSPIHKIYKGISRNKDSDSEKREVLRNISINANHADNLLQQENKRLKRSLDDAITNENINSKNLEVFYHRPAPKPPVTKKVEIVEPAKSASLSNNRNIITVNDSQYEKIELLGRGGSSRVYKVKGSGNRVYALKRVSFDAFDDSSIDGFKGEIELLEKLKDQKRVIQLLDYEMGDGLLYLIMECGDHDLSQILNQRSGMPLDFNFVRFYTKEMLLCIKVVHDAGIVHSDLKPANFVLVKGILKIIDFGIANAVPEHTVNIYRETQIGTPNYMAPEALVAMNYTQNSENQHEGNKWKVGRPSDMWSCGCIIYQMIYGKPPYGSFQGQNRLLAIMNPDVKIPFPEHTSNNEKIPKSAIELMKACLYRNPDKRWTVDKVLSSTFLQPFMISGSIMEDLIRNAVRYGSEKPHISQDDLNDVVDTVLRKFADYKI", - "output": "kinetochore ; nucleus ; spindle pole body ; ATP binding ; kinetochore binding ; MAP kinase kinase activity ; protein kinase activity ; protein serine kinase activity ; protein serine/threonine kinase activity ; protein serine/threonine/tyrosine kinase activity ; protein tyrosine kinase activity ; chromosome segregation ; meiotic spindle assembly checkpoint signaling ; mitotic spindle assembly checkpoint signaling ; peptidyl-serine phosphorylation ; protein localization to kinetochore ; regulation of attachment of spindle microtubules to kinetochore ; sister chromatid biorientation ; spindle assembly ; spindle pole body duplication" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MQEKLKNDKLKIGKYEFDSRFILGSGKYSLELIKSAIEEAKAQIITLALRRANTGEIANILDYIPKNITLLPNTSGARNAEEALRIARLSRELGCGELIKIEVISDSRYLLPDNYETIKACELLAKEGFTPLPYMHADLYAARAMRDAGAAAIMPLAAPIGSNKGLCAKEFIQILLNEIDLPIIVDAGIGSPSQACEAMQMGVSAVMVNTAIAEAKDIALMARAFSLAVNAGRAAFLAGLASVSEAKASSPLTGFLRD", - "output": "cytoplasm ; thiazole synthase activity ; thiamine diphosphate biosynthetic process" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MSDLTSTILFEHPLNEKMRTWLRMEFLLQQLESHRSLDNIANALTFFRSASDLIDVLERGEVRTDLLKELERQQQKLQQWADIPGVDVSLVDSLRNQLKSRAAVLMSAPRIGQSLKEDRLISVVRQRLSIPGGCCSFDLPTLHVWLHQPSEQRDQHINKLLASLAPLHQSLTIILDLIRQSCPLRSQISLNGFFQDNAGGADLLRLRLPLDPQLYPQISGHKTRYAIRFLALDSENGTVPARLSFELACC", - "output": "cytoplasm ; division septum assembly ; FtsZ-dependent cytokinesis" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MAREYKIEDYRNFGIMAHIDAGKTTTTERILYYTGKSHKIGEVHDGAATMDWMEQEQERGITITSAATTTYWKGRDGKTRRFNIIDTPGHVDFTIEVERSLRVLDGAIALLDANAGVEPQTETVWRQAEKYNVPRMIFCNKMDKTGADFYRSVEMIKTRLGATAVVMQLPIGAETEFKGVIDLIEMNALIWRDESLGAQWDVVEIPEDMKAKAEEYREKLIETVVEIDEAATEAYLEGNLPDNDQIRALVRRGTIDVKFHPMFCGTAFKNKGVQPLLDAVVDYLPSPLDIPAIKGIDFKTDAEIERHADDSEPLSMLAFKIMNDPFVGSLTFARIYSGKLEKGASVMNTVKDKRERVGRMLQMHSNSREDIEEAFAGDIVALAGLKETTTGDTLCDPLKPVILERMEFPEPVIQIAIEPKTKGDQEKMGLALNRLAAEDPSFRVKTDQESGQTIIAGMGELHLDIIVDRMRREFKVEATVGAPQVAYRETITRLTEKDYTHKKQSGGTGQFARVKIVFEPNPEGDDFKFESKIVGGSVPKEYIPGVQKGIESVLSSGPLAGFPMLGVKATLIDGAFHDVDSSVLAFEIASRACFREAAREAGAQLLEPMMKVEVVTPEDYVGDVIGDLNSRRGQIQGQEARGIAVVINANVPLANMFKYVDNLRSMSQGRAQYTMTFDHYAPVPSNVAQEIQAKYSGQK", - "output": "cytoplasm ; GTP binding ; GTPase activity ; guanosine tetraphosphate binding ; translation elongation factor activity" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MFHSLSVKNFILIDELEIEFTNGLCVITGETGAGKSILLDAILFCLGYKTSSAGIIKHGKDYAAVNIVFSLNDEIKNFLTQNFIELEESLLIKCVQKAEGRKNFFINNQVVNKAIMQQLATYLFELHGQNNNISLLEINTQRDILDSFGDLLELRMQLAKCYQAWQNIRNEIAEIALKQNSIEQEIDYLNFVTEELIKLNVQTGEEEQLTNIRKDLQNKDKDLQLIKDIFEQVNNPEINSSISKAEKLLAKQSQNEEFANISTNLEEAYNNLEEARQNLSNLLENFNKLDYNLEEIEERLFAIKAISRKYNVSADALKTFLEESLNRLNSLKGKIANQAELQVQEAKLSTEYYKLGKDLSGKRLAAAKRLEEVLHHELKQLKMEKATFHVNIAERKEAAAYGIDDIVFKASTNPGMSPEAINKIASGGELSRFMLALKTSLFNKMVKPAIIFDEIDVGIGGEVADKVGERLKKLSSATQVIVITHQPQVAGKADLHIKIEKTQLEKETKVTVKALNLAERQQELARMISGKAITEASLKAAKELLCHPVA", - "output": "ATP binding ; DNA recombination ; DNA repair" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MPRSLKKGPFIDDHLLKKVETQNDKGTKNVIKTWSRRSTIIPEMLGHTIAVHDGRKHVPVFVTEAMVGHKLGEFALTRTFKGHEKDDRKSRRR", - "output": "cytoplasm ; small ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MAVCPHEWLLYCRPGFEKDLSAELADKTAHAGQGGYPIAARDSGHVRFVLDPETPANEVHRALPLEALVFARQSLVAFPPLEALPRDDRLSAIVDLVVASGWSFESIWQETPDTNEEKALAGLMKALRKPLESTLKKRGALRRKAGGRRLHLFWTAGDRVQLAMSFPGNRAEHLGGIPRLKFPREAPSRSTLKLEEAWHVFVPREAWPTRLSDSMQAADLGAAPGGWTYQLVRKGMYVYAIDNGPMDDALMASGQVEHLCEDGFVWQPPMRLDWLVCDIVDKPMRVIDMVERWLVAPWCHEAIFNLKLPMKKRWDEVSRCLERLASSLDQAGIRARIRCRHLYHDREEVTVHVCLLD", - "output": "cytoplasm ; S-adenosylmethionine-dependent methyltransferase activity ; methylation ; rRNA processing" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MKEEEEIGKPAKPKAKKDVAPGRLIDTYAAQCDNCHKWRVIDSQEEYEDIRSKMLEDPFNCQKKQGMSCEEPADIDYDSSRTWVIDKPGLPKTPKGFKRSLVLRKDYSKMDTYYFTPTGKKLRSRNEIAAFVEANPEFRNAPLGDFNFTVPKVMEDTVPPDPKLGSPFPSTTTTTSEKSSVKQSHN", - "output": "histone deacetylase complex ; nucleus ; methyl-CpG binding ; zinc ion binding" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF", - "output": "actin cytoskeleton ; cytoskeleton ; dense body ; focal adhesion ; nucleus ; plasma membrane ; ATP binding ; hydrolase activity" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MQYSFTEKKRIRKSFAKRPIVHQVPFLLATQLESFSTFLQADVPGTQRKPEGLQAAFTSVFPIVSHNGFARLEFVSYALSSPAFNIKECQQRGLTYCSALRAKVRLVILDKESPNKPVVKEVKEQEVYMGEIPLMTPTGSFVINGTERVIVSQLHRSPGVFFEHDKGKTHSSGKLLFSARIIPYRGSWLDFEFDPKDILYFRVDRRRKMPVTILLKAIGLTPEQILANFFVFDNFTLMDEGAQLEFVPERLRGEVARFDITDRDGKVIVQKDKRINAKHIRDLEAAKTKFISVPEDYLLGRVLAKNVVDGDTGEVIASANDEVTESVLEKLREAGIKEIQTLYTNDLDQGPYISSTLRVDETTDKTAARIAIYRMMRPGEPPTEEAVEALFNRLFYSEEAYDLSKVGRMKFNRRVGRDEITGPMTLQDDDILATIKILVELRNGKGEVDDIDHLGNRRVRCVGELAENQFRAGLVRVERAVKERLGQAESENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSEITHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLALYAHLNEYGFLETPYRKVVDSKVTDQIDYLSAIEEGRYMIAQANAAIDENGQLVDELVSSREAGETMMVTPDRIQYMDVAPSQIVSVAASLIPFLEHDDANRALMGSNMQRQAVPCLRPEKPVVGTGIERTCAVDSGTTVQAFRGGVVDYVDAGRIVIRVNDDEAVAGEVGVDIYNLIKYTRSNQNTNINQRPIVKMGDKVSRGDVLADGASTDLGELALGQNMLIAFMPWNGYNFEDSILISEKVVADDRYTSIHIEELNVVARDTKLGPEEITRDISNLAEVQLGRLDESGIVYIGAEVEAGDVLVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDTSLRVPSGMSGTVIDVQVFTREGIQRDKRAQQIIDDELKRYRLDLNDQLRIVEGDAFQRLARMLVGKVANGGPKKLAKGTKIDQAYLEDLDHYHWFDIRLADDEAAAQLEAIKNSIEEKRHQFDLAFEEKRKKLTQGDELPPGVLKMVKVYLAVKRRLQPGDKMAGRHGNKGVVSKIVPIEDMPYMADGRPADVVLNPLGVPSRMNVGQVLEVHLGWAAKGLGWRIGEMLQRQAKIEEMRSFLTKIYNDSGRKEDLESFTDDEILELAKNLREGVPFATPVFDGATEEEMGKMLDLAFPDDIAEQLGMNPSKNQVRLYDGRTGEMFERRVTLGYMHYLKLHHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGASYVLQEMLTVKSDDVNGRTKVYENLVKGDHVIDAGMPESFNVLVKEIRSLGIDIDLDRN", - "output": "DNA-directed RNA polymerase complex ; DNA binding ; DNA-directed 5'-3' RNA polymerase activity ; ribonucleoside binding ; DNA-templated transcription" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MKRKMLKRLLTSAFACMFIANGLITTTVRAVGPKTGEENQVLVPNLNPTPENLEVVGDGFKITSSINLVGEEEADENAVNALREFLTANNIEINSENDPNSTTLIIGEVDDDIPELDEALNGTTAENLKEEGYALVSNDGKIAIEGKDGDGTFYGVQTFKQLVKESNIPEVNITDYPTVSARGIVEGFYGTPWTHQDRLDQIKFYGENKLNTYIYAPKDDPYHREKWREPYPESEMQRMQELINASAENKVDFVFGISPGIDIRFDGDAGEEDFNHLITKAESLYDMGVRSFAIYWDDIQDKSAAKHAQVLNRFNEEFVKAKGDVKPLITVPTEYDTGAMVSNGQPRAYTRIFAETVDPSIEVMWTGPGVVTNEIPLSDAQLISGIYNRNMAVWWNYPVTDYFKGKLALGPMHGLDKGLNQYVDFFTVNPMEHAELSKISIHTAADYSWNMDNYDYDKAWNRAIDMLYGDLAEDMKVFANHSTRMDNKTWAKSGREDAPELRAKMDELWNKLSSKEDASALIEELYGEFARMEEACNNLKANLPEVALEECSRQLDELITLAQGDKASLDMIVAQLNEDTEAYESAKEIAQNKLNTALSSFAVISEKVAQSFIQEALSFDLTLINPRTVKITASSEETSGENAPASFASDGDMNTFWHSKWSSPAHEGPHHLTLELDNVYEINKVKYAPRQDSKNGRITGYKVSVSLDGENFTEVKTGTLEDNAAIKFIEFDSVDAKYVRLDVTDSVSDQANGRGKFATAAEVNVHGKLKENAEVTGSVSLEALEEVQVGENLEVGVGIDELVNAEAFAYDFTLNYDENAFEYVEAISDDGVFVNAKKIEDGKVRVLVSSLTGEPLPAKEVLAKVVLRAEAKAEGSNLSVTNSSVGDGEGLVHEIAGTEKTVNIIEGTSPEIVVNPVRDFKASEINKKNVTVTWTEPETTEGLEGYILYKDGKKVAEIGKDETSYTFKKLNRHTIYNFKIAAKYSNGEVSSKESLTLRTAR", - "output": "-3-O-(N-acetyl-D-glucosaminyl)-L-serine O-N-acetyl-alpha-D-glucosaminase activity ; -3-O-(N-acetyl-D-glucosaminyl)-L-serine/L-threonine O-N-acetyl-alpha-D-glucosaminase activity ; -3-O-(N-acetyl-D-glucosaminyl)-L-threonine O-N-acetyl-alpha-D-glucosaminase activity ; beta-N-acetylglucosaminidase activity ; carbohydrate binding ; carbohydrate metabolic process ; polysaccharide catabolic process ; protein deglycosylation" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MIIKIHNQTSFCITPFKSLLIKMFLPIKEKKLMHLIFVTNEKIQELNSFYRQKNYPTDVLSFPNDLTFFAGLEDNSLGDVFISFSKAQVQAQTAKHSLEREIAFLAVHGFLHLKGYQHRTEEEFQIMLALQEKILQNVGLNLDKTT", - "output": "cytoplasm ; metalloendopeptidase activity ; RNA endonuclease activity ; zinc ion binding ; rRNA processing" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MARRPEADAPPKKQAGPRINEEIRAAKVLLIDENGEKQGVMPLAAALDAAREASMDLVEVSAGQETPVVKILDYGKLRFEERKKKAAARKKQKSSELKEIKIRPNIDTHDYEVKARAIARFFEEGDKVKITLRFRGREMAHQHLGMELLEKVKKDFEETAKVELEPKLEGKQMTMVLAPR", - "output": "cytoplasm ; translation initiation factor activity" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MHLLIPAAGSGRRFGADRNKLLLPLLGQPVLAWTLQAADQAQSITWIGIIGQPGDRADIEALVDQLQLATPVSWIQGGRERQESVFNGLRSLPSGAQQVLIHDGARCLATPTLFDRCSAALQTCPAFVAAVPVKDTIKQVAADGTIAATPDRSTLWAAQTPQGFTVESLLRCHRQGLEQQLAVTDDAALLEAFGLPVQIVEGEETNLKVTTPADLAIAELILKQRQFTAAIA", - "output": "2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity ; isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway ; terpenoid biosynthetic process" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MNANWNFDNSYARLPERFFTRIYPTPVSDPKLVVLNHSLAKELGLNAEVLASEEGVAVFAGNRVPEGAEPLAQAYAGHQFGYFNMLGDGRAILLGEHVTPSGERVDIQLKGSGRTPYSRGGDGRAALGPMLREYIISEAMHALGIPTTRSLAVVTTGEVVMRETELPGAILTRVAASHLRVGTFQYAGRFLSKEELQALADYAIKRHYPNGEHASNRYVFLLEEVMKKQAALVAKWQLVGFIHGVMNTDNMTISGETIDYGPCAFMDVYDPETVFSSIDTQGRYAYGNQPYIAGWNIARFAESLLPLLHDEEEKAIEIAQKVIEQFPALYETYWLQGMRAKLGLWTEEAEDKKLIGELLHLMYTHRLDYTNTFRSLTLEEWHFCEQELRDWYTRWQQRIARQDMTKEEVYECMRQNNPAIIPRNYRVEEALAAAVEHGDDTVMERLLHVLSDPYAYMEEQEEYAKTPEPSDRPYRTFCGT", - "output": "ATP binding ; magnesium ion binding ; nucleotidyltransferase activity" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MAAARNATPTPQNGRDASRLSFAKITDTLTVPDLLALQTESFDWLVGSDAWKRRVEEGTAQGRTDLALNSGLEEIFEEISPIEDLGETMQLGFTNPYLEEQKYSIDECKERGKTYSAPLYVEAEFMNHLTGEIKTQTVFMGDFPLMTEKGTFIINGTERVVVSQLVRSPGVYFERQQEKTSDKDIYSARVIPSRGAWLEFEIDKRDQVGVRIDRKRKQSVTVFLKALGLTSEQILEEFKGVASIELTLEKDSILTKEEALKDIYRKLRPGEQVAAEAARALLDNFYFNPKRYDLAKVGRYKINRKLGIDKQLTDSVLTVEDILATIKYLVSLHANETKMNGTRDGKPVELRLDVDDIDHFGNRRIRAVGELIQNQVRTGLSRMERVVRERMTTQDIEAITPQTLINVRPVVAAIKEFFGTSQLSQFMDQNNPLAGLTHKRRLSALGPGGLSRERAGVEVRDVHPSHYGRMCPIETPEGPNIGLIGSLASFARINSFGFIETPYRRVVDGVVTDTIDYLTASEEDEFLVAQANAPLTKDFRFAEDRVLVRPKGGEVELVAKENVHYMDVSPRQMVSVATSLIPFLEHDDANRALMGANMQRQAVPLLRSESPLVGTGMEGYAAIDAGDVLTADASGVVQEVSAEVVTIQLDEGGTQTYYLRKFDRSNQGTSYNHRVLVSAGDRIEAGEVIADGPATENGELALGKNLLVAFMPWEGHNFEDAIILSQNLVKDDTLSSIHIEEYEVDARDTKLGKEEITRDLPNVSPELLADLDERGIIRIGAEVRPGDILVGKVTPKGETELSAEERLLRAIFNEKSREVRDTSLKVPHGEQGTIIGVKVFDSQDGDDELGSGVNQRVVVFIAQKRKITEGDKLAGRHGNKGVISKILPVEDMPFLADGTPVDVILNPLGIPGRMNFGQVLETHLGWIAKQGWEVEGKPKWAERLPDHARQAPAGTKVATPVFDGALEEEIAGLLDSTTVTRDGDRLIGSSGKTRLFDGRSGEPFPEPVSVGYMYILKLHHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYALQELLTIKSDDILGRVKVYEAIVKGENIQEPGIPESFKVLIKEMQSLCLNVEVLSADGQAVSLRDTDDEVFRAAEELGINISTRFESSSIDDI", - "output": "DNA-directed RNA polymerase complex ; DNA binding ; DNA-directed 5'-3' RNA polymerase activity ; ribonucleoside binding ; DNA-templated transcription" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MNKDHEEQLEINEVSQKNKYKSIIESLLFMSGEPINIKDLATILNCKQDKVSSLLNEMNNSYVGKDRGIKILIHNRAVQLVTKPENSIYVEKLLKTNVRQSLSQAALETLSIIAYKQPITRVAIDEIRGVKSDRAIYTLLEKNIIKECGRLDVPGKPILYGTTEEFLKFFGLDSIEAIPNLEDLLKEFSKEEN", - "output": "cytoplasm ; cell division ; chromosome separation ; DNA replication" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MNINLDTAKDTLCKNILIYGYCKYENKGCAFSHNRQQPAQQQQATNTSNNSTSVITPNSANSTASSADLSSKKKFNLNTPSFQPSVSNLSNKFSTLSPKLKEIPVFKPENGVSEPDTVDSPTTQRPFTSKRFNVSTPSFTPTNFDFANNSNADGNRGGASTPIGISSAPLVQNQQQQQQQQQQQQKQPLAVPSPLASGAQPPTMQHRILSMGVSQSSPSTNPYFANNLDMSAPTPGSETPGPVLPGSAGAAAAAANQPMYPLQYHLYAPAPPPRLTIPLQPYETNSQAMFIPNDLREYLHKKNEASLQSLSHSNLPEHVNQYHSLVPIDKSYEPVSKLWLGKNSLIFKCLDNIDGNLYVMRKIEPCNEIINEKPFKTIKRWKSIKNANIVGLQDAFTTMAFNGNQSGNTSLCIIYDYYPNSISLLEHHKKGLRVEPVNEALLWNYLIQLINAIMAIHEKGLSASSTIDLSKIIVTNKNRIKLSSVGISDILEFKDDETNQDIKIRQLQDIQKVGKVLMELAILLLPVNMRQSNNIYNSLKASTNLSEEIINNLQELNDLDTASGEFDLNEFSQRLTPKMFNIIDSLQNSSDFIEGQLTSELENARLFRLMTKLNYLIHDNSNSENDKIIKLFLNYVYNCYDSNNKKVINLNKVLINLNKLDCGIDEKILLVNNDECIIISYKELKEIIDTKFRLMRE", - "output": "P-body ; PAN complex ; ATP binding ; metal ion binding ; poly(A) binding ; protein kinase activity ; mRNA processing ; nuclear-transcribed mRNA poly(A) tail shortening ; protein phosphorylation" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MLDREGFRPNVGIILLNARNEVFWGKRLREHSWQFPQGGIKYGETPMQAMYRELHEETGLLPEHVKIIGRTRDWLRYEVPDKFIKREVRGHYRGQKQIWFLLRMLGRDCDICLRATDHPEFDAWRWNEYWVPLDAVIEFKRDVYQLALTELSRFLRRPAQRADKPRGPRLPRYPRVIAAQPAETLTIVDTSVVCSEVEVEASTLDEMPPRVIVGK", - "output": "pyrophosphatase activity" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "WCSTCLDLACGASRECYDPCFKAFGRAHGKCMNNKCRCYT", - "output": "extracellular region ; ion channel inhibitor activity ; potassium channel regulator activity ; toxin activity" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MNLQDVILTPIVTEKSQDLETIGANSKKGTRMVKYTVKVHIDANKTLIKEAFKKIFKVTPSSVNVQVYRGKIKRFRNMPAARPHWKKAIVTFRDGASIDFAKEA", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MENKNQKHNNEFHEKNQQSQKDNNNVKKENLHEDQSDLNDANFDDGGKKNKLKNDIKKLNHLVDSLKNENNNKQAKIESLERQINLLNENFKSEVIKKASEAQTKLDEKIKEFQAKYETELKHAKKYALKSSAIELIDIVSNFELAVNSKVTNPEIANYLKGFQMFANMFKNYFQQNGITEIPVNLNDDFNAEVMQAFETQKAPNTQPNKVIKIIKKGYKLHDIVLVPATVIVSE", - "output": "cytoplasm ; adenyl-nucleotide exchange factor activity ; protein homodimerization activity ; protein-folding chaperone binding ; protein folding" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MTSTFRHVALIGKYHAPSASAPSENASNALERIADFLRRQGCEVVLDTQSALHAGLTDYPTLDVDGLGRHCDLGLVVGGDGTMLGVSRHLAQYGTPLIGVNQGRLGFVTDIALEDFEATLTPMLQGEYEEDLRPLMCARVIRDGQCVFEALAMNDVVVNRGGTSGMVELRIEVGGRFVSNQRADGLIVATPTGSTAYALSAGGPMMHPSIPAWVMAPIAPHNLSNRPIVLSDANEVTIEVVAGRDVSANFDMQSLASLQHGDRILVSRAHHSVRFLHPKGWNYFATLRKKLGWNEGGA", - "output": "cytoplasm ; ATP binding ; metal ion binding ; NAD binding ; NAD+ kinase activity ; NAD metabolic process ; NADP biosynthetic process ; phosphorylation" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MLSHAELKQGFHYFMMGWHLITQKGLRRFVIMPILLNIVLLSGLFWLFITQIEKMIGMLMLSIPDWLSWLSSILLIFAILMILVLFYFVFTTLSGFIAAPFNGLLAEKVEKMLTGENLVEGSVWDFMKDIPRMLGREWQKLVYSLPKLIILFLLGFVPVLGQSVIPIIVTLFTAWMMAIQYCDYPFDNHKVPFFVMKAELAEKRALSLSFGGLVMLCTFIPLVNLVVIPVAVCGATAMWVTHFRDHLAMKPLNQEGVSRVSTVSIVK", - "output": "plasma membrane ; sulfate transmembrane transporter activity ; cysteine biosynthetic process ; sulfate assimilation" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MSLTRHEIREKAFQALFALNANPDADENQLFQQLLNPEETDAVEIPAYLSTLVTGVREHQVELDAQIQPYLSQKWSLDRLAKTDLIILRIAFFELQFVDDVPTKVAVNEAIELTKAFSDDRSRKFVSGVLGKVVKNQAN", - "output": "RNA binding ; DNA-templated transcription termination ; transcription antitermination" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MTSFKLVKYIPRIKKKKSGLRKLARKVPTDRLLKFERIFKAQKRINMSVFKAQRVLDEIRWRYYEETVMILNLMPYRASYPILKLVYSASANATHYRNFDKANLFITKAEVSRSTIMKKFRPRARGRSFPIKKNMCHITIILNIVKK", - "output": "chloroplast ; large ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MKKSKSKYLTLAGLVLGTGVLLSACGNSSTASKTYNYVYSSDPSSLNYLAENRAATSDIVANLVDGLLENDQYGNIIPSLAEDWTVSQDGLTYTYKLRKDAKWFTSEGEEYAPVTAQDFVTGLQYAADKKSEALYLVQDSVAGLDDYITGKTSDFSTVGVKALDDQTVQYTLVKPELYWNSKTLATILFPVNADFLKSKGDDFGKADPSSILYNGPFLMKALVSKSAIEYKKNPNYWDAKNVFVDDVKLTYYDGSDQESLERNFTAGAYTTARLFPNSSSYEGIKEKYKNNIIYSMQNSTSYFFNFNLDRKSYNYTSKTSDIEKKSTQEAVLNKNFRQAINFAFDRTSYGAQSEGKEGATKILRNLVVPPNFVSIKGKDFGEVVASKMVNYGKEWQGINFADGQDPYYNPEKAKAKFAEAKKELEAKGVQFPIHLDKTVEVTDKVGIQGVSSIKQSIESVLGSDNVVIDIQQLTSDEFDSSGYFAQTAAQKDYDLYHGGWGPDYQDPSTYLDIFNTNSGGFLQNLGLEPGEANDKAKAVGLDVYTQMLEEANKEQDPAKRYEKYADIQAWLIDSSLVLPSVSRGGTPSLRRTVPFAAAYGLTGTKGVESYKYLKVQDKIVTTDEYAKAREKWLKEKEESNKKAQEELAKHVK", - "output": "ATP-binding cassette (ABC) transporter complex ; outer membrane-bounded periplasmic space ; peptide transmembrane transporter activity ; peptide transport ; protein transport" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MDKQLNDAPCGFLALSEEGSIIAANRTLIKILDYEPEQVIGQHMNMMLTIPAQLFCQLYFFPLLKLEHHIEEIYISLKARDGEEIPVLINAIARHDSGASVFDCVLIPMRKRNEYENELLIARNEAQEALLAKQKANAELEIALETLKAKQEELLEINKQNQQFKLNTKRELELARKIQKNSLTEPIVNDQVQIDSYYNASSELSGDLYGYYQIDEHRYGIIILDVMGHGISSALITMSLHPLFQRQITQGLSPVKVMKELDRHLHSLFQNDEEARHYCTAIYLEIDIARQRIDYVNAGHPPALWQDDSGTQHLLHATSPPIGMFEDLEFQSSSLSYTEDGRLLLYTDGVMDPTASCYLFDLLKDHPDSPIADLKEKILTSLQHQKEAHHKSDDECFILVDVK", - "output": "L-phosphoserine phosphatase activity ; phosphoprotein phosphatase activity" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MSEDYLDRDVSPALTVGEADIDVSLRPRSLREFIGQPRVREQLQLVIEGAKNRGATPDHILLSGPPGLGKTSLAMIIAAELGSSLRMTSGPALERAGDLAVMLSNLVEHDVLFIDEIHRIARPAEEMLYLAMEDFRVDVIVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRDRFGFTAHMDFYEPTELEGVLARAAGILGIELGVEAGAEIARRSRGTPRIANRLLRRVRDFAEVRADGVITRDVAKAALAVYDVDELGLDRLDRAVLSALTRSFGGGPVGVSTLAVAVGEEATTVEEVCEPFLVRAGMVARTPRGRVATAQAWTYLCMTPPVGVTGLSQPGLFES", - "output": "cytoplasm ; ATP binding ; ATP hydrolysis activity ; DNA binding ; four-way junction helicase activity ; DNA recombination ; DNA repair ; SOS response" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MAKRDYYEVLGVAKNASDEDLKKAYRKLAMKYHPDRNPDSKEAEEKFKEAKEAYEVLGDEQKRAAYDRYGHAGVDPNAAGMGGGMGGGMGGGFADAFGDIFGEIFGAGRRGGGGPQVYRGADLKYALEITLEQAASGFDTEIRVPSWENCDTCHGSGAKAGTSPKTCRTCGGSGAVRMQQGFFSVQQTCPTCHGTGKEITDPCPSCDGVGRTRRNKTLQVKIPAGIDDGMRIRSSGNGEPGINGGPPGDLYVEIHIKQHKIFQRDGDDLHCELTIPFTTAALGGELQVPTLGGKAEISIPEGTQSGKTFRLRAKGIRGVRGSYPGDLYCHVVVETPVRLSDEQKAILRQFEASLNDGGDRHSPQSKSWTDRVKEFFS", - "output": "cytoplasm ; ATP binding ; heat shock protein binding ; unfolded protein binding ; zinc ion binding ; DNA replication ; protein folding ; response to heat" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MPIKSRIRAIPDYPKKGIMFRDITTLIKDPVGFRLVIDGLTQRYLENGVDFDVVVGVEARGFILGSALAYTLGKGFVPVRKPGKLPADVVSQEYELEYGTDKVEIHLDAILPGTRVLLVDDLLATGGTALAAAALVEKVGGVVAEMAFIVNLPDIGGERKILDKGYRVFSLTEFEGE", - "output": "cytoplasm ; adenine phosphoribosyltransferase activity ; adenine salvage ; AMP salvage ; purine ribonucleoside salvage" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MAREREQRHEREDRDNTFVDKLVHINRVAKVVKGGRRFGFAALVVVGDQKGRVGFGHGKAREVPEAIRKATESAKRALIRVPLREGRTLHHDVHGHHGAGKVILRAAPAGTGIIAGGPMRAVFETLGMHDVVAKSFGSSNPYNMVRATFDALKNQDSPRSVAARRGIKVSQLQSRRRVEDAEATD", - "output": "small ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MPEGPEIRRAADNLEAAIKGKPLTDVWFAFAQLKPYESQLTGQIITRIETRGKALLTHFSNGLTLYSHNQLYGVWRVIDTGEIPQTTRILRVRLQTADKTILLYSASDIEMLTAEQLTTHPFLQRVGPDVLDARLTPEEVKARLLSPRFRNRQFSGLLLDQAFLAGLGNYLRVEILWQVGLTGQHKAKDLNEAQLNALSHALLDIPRLSYTTRGQADENKHHGALFRFKVFHRDGEACERCGGIIEKTTLSSRPFYWCPHCQK", - "output": "class I DNA-(apurinic or apyrimidinic site) endonuclease activity ; damaged DNA binding ; oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity ; zinc ion binding ; base-excision repair" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MVTIWLGSGRMLVLASASPRRAMLLEAEGFSFIRVEADVSEVLPQGISPESAVKGLALRKAQAGLNRWLNHGGSREDIILGADTIVVLNQQILGKPRDEEEAEAMLTALSGQTHYVYTGVALVNGAGRQECGAVCTAVFFRSLTHEEILEYIATGEPVDKAGAYGIQGLGGHLVDHYEGSLSNVIGLPMEYVKERLSVWGMGLGDIALHEVKDGLPSVKGST", - "output": "cytoplasm ; dTTP diphosphatase activity ; UTP diphosphatase activity ; nucleotide metabolic process" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MGDAGGHSHHHQHGFQPQLLSFGGVGHHHHLHQFTAQPQPPAASHTRGRGGGGEIVPATTTPRSRGGGGGGGGEIVAVQGGHIVRSTGRKDRHSKVCTARGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKNAKDAIDKLDVLPAWQPTAGGAGAGNAAAPPSSSTHPDSAENSDDQAQAITVAHTAFDFAGGGSGGTSFLPPSLDSDAIADTIKSFFPMGGTAGGEASSSTTAAQSSAMGFQSYTPDLLSRTGSQSQELRLSLQSLPDPMFHHQQHRHGGGGGGGNGTTQQALFSGAANYSFGGGAMWATEQQAQNQRMLPWNVPDPGGGGGAAYLFNVSQQAAHMQAAAAALGGHQSQFFFQRGPLQSSNQPSERGWPETVEADNQMSHHQGGLSPSVSAAIGFAAPGIGFSGFRLPARIQGDEEHNGGGGGNGDKPPPPSSVSSASHH", - "output": "nucleus ; DNA-binding transcription factor activity ; sequence-specific DNA binding ; regulation of secondary shoot formation" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MLAFIQGELAEVKENYVVVDNNGMGYEIFIPHTVHSYLPAIGDKVKFHTYLQVREDGMALFGFLNREDLAMFKLLITVNGIGPKGAIGILSAISTDDLRFAVLAEDVKAISKAPGIGTKTASKLILELKDKFKLEDAFEATFQSNQVISTGGKGNNDGIREEAIQALVALGYSATDALKAVKAVEITSNMTSEDVLKFSLRNF", - "output": "cytoplasm ; Holliday junction helicase complex ; ATP binding ; DNA binding ; four-way junction helicase activity ; DNA recombination ; DNA repair ; SOS response" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MPFLGQDWRSPGWSWIKTEDGWKRCESCSQKLERENNRCNISHSIILNSEDGEIFNNEEHEYASKKRKKDHFRNDTNTQSFYREKWIYVHKESTKERHGYCTLGEAFNRLDFSSAIQDIRRFNYVVKLLQLIAKSQLTSLSGVAQKNYFNILDKIVQKVLDDHHNPRLIKDLLQDLSSTLCILIRGVGKSVLVGNINIWICRLETILAWQQQLQDLQMTKQVNNGLTLSDLPLHMLNNILYRFSDGWDIITLGQVTPTLYMLSEDRQLWKKLCQYHFAEKQFCRHLILSEKGHIEWKLMYFALQKHYPAKEQYGDTLHFCRHCSILFWKDYHLALLFKDSGHPCTAADPDSCFTPVSPQHFIDLFKF", - "output": "cytoplasm ; nucleus ; SCF ubiquitin ligase complex ; ubiquitin ligase complex ; actin binding ; ubiquitin-protein transferase activity ; protein ubiquitination" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MSITKEQILDAISEMSVMNIVELISDMEKKFGVSSIIPSSSTSTQNIETAEAKTEFDVLLKSIGGNKVSVIKAVRSATGLGLKEAKDLVESAPTIIKERITQDAAESLKKILNETGAEVEIK", - "output": "ribonucleoprotein complex ; ribosome ; structural constituent of ribosome ; translation" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MSRFISTFRSSSAQLSIVLAVILATGCSQPTTLQEIREEGVLHVITRVAPSIYYQDREQDTGYDYELARLFANELGVELRVRVADDNSEILSVLSRNYAHVGLAGLTQRPDFDNQYRSVPIGVSAQSVIVYHKEVPAPESLEDLASETIHMLADSNHEHLIADPANEAGPIIQKHPGLDAAGLLARVESGEFGYAAVASNELDLNHVFFPKVYEAFALNEPSDLVWLFPAAQDDTLVNAAEAFMERVNNNGTMAQLAERFYGHLDRLNYVGARTFMHHVENRLPRYQSLFKDYAQESGMDWRLLAAIGYQESHWRPNAVSPTGVRGLMMLTRTTANYIGINNRLDAEESIEGGARYFRMVHGRIPDRIPEPDRTWFALASYNVGFGHLEDARRLAESAGKDPDRWMDVKEFLPLLAQKEWYTKTRFGYARGHEPVVYVQNIRRYYDVLVRITEPDAPSASGLEDQLAWLGDNEAGPEAPAKESQPDLRADLPPELRLIPPTL", - "output": "cell outer membrane ; lytic transglycosylase activity ; cell wall macromolecule catabolic process ; cell wall organization ; peptidoglycan metabolic process" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MGQDQTKQQIEKGLQLYQSNQTEKALQVWMKVLEKGSDLVGRFRVLGCLVTAHSEMGRYKEMLKFAVVQIDTARGLEDADFLLESYLNLARSNEKLCEFHKTISYCKTCLGLPGTRAGAQLGGQVSLSMGNAFLGLSLFQKALESFEKALRYAHNNDDTMLECRVCCSLGSFYAQVKDYEKALFFPCKAAELVNDYGKGWSLKYRAMSQYHMAVAYRLLGHLGSAMECCEESMKIALQHGDRPLQALCLLCFADIHRSRGDLETAFPRYDSAMSIMTEIGNRLGQVHVLLGVAKCWMARKVQDKALDAIEKAQDLAEEVGNKLSQLKLHCLSESIYRSKGLQRELRTHVVRFHECVEETELYCGLCGESIGERNSRLQALPCSHIFHLRCLQNNGTRSCPNCRRSSMKPGFV", - "output": "centrosome ; cytosol ; Golgi apparatus ; membrane ; neuromuscular junction ; plasma membrane ; postsynaptic specialization membrane ; synapse ; acetylcholine receptor binding ; ionotropic glutamate receptor binding ; metal ion binding ; protein-membrane adaptor activity ; structural constituent of postsynaptic specialization ; establishment of protein localization to postsynaptic membrane ; motor neuron apoptotic process ; neurotransmitter receptor localization to postsynaptic specialization membrane ; positive regulation of motor neuron apoptotic process ; positive regulation of neuromuscular synaptic transmission ; regulation of postsynaptic membrane organization ; synaptic transmission, cholinergic" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MIALIQRVSEAAVRVDGEVVGQIDKGLLVLLGVEKDDDEAKAKRLMERVTTYRVFEDSEGKMNLNVQQVDGKVLVVSQFTLPADTKKGTRAGFSRGAHPADAERLYDYFSDLCQQVLPTERGRFAADMKVSLINDGPVTFWLQV", - "output": "cytoplasm ; D-aminoacyl-tRNA deacylase activity ; Gly-tRNA(Ala) hydrolase activity ; Ser(Gly)-tRNA(Ala) hydrolase activity ; tRNA binding ; D-amino acid catabolic process" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MLTHTLGFPRMGAHRELKKNLESYWKGAIGQEKLMASGRELRLRHWRLQQQAGIDLVPVGDFSYYDHMLDMVAMLGAVPPRFGWQGESVDLDTYFYMARGSSGHRTTTAMEMTKWFDTNYHYIVPEFYPGQRFRLARNRLFEELAEACIEGIQAKPVLPGPMTFIALGKEMVAGFDRWSHLDAVVEVYEEIVSRVAAKCSWIQLDEPILATDVPGPIRLRVRDVYRRLAAVAGPCRLMVATYFGALQENLDLALSLPVDGLHVDLVRAPGQLEKVLPCLPENMVLSLGLIDGRNVWRSNLRQAISTAQDAVVARGSDRVMIAPSCSLLHVPVDLAGEAVLDPRIRSWLAFARQKCQEVNVVRLALDGEDVTEVLQANDTAMENRRKSALVHRDAVRRRMADISPDMYCRRSSFEERKKQQAWLRLPTLPTTTIGSFPQVAGVRSARRSFKQGRISEEQYRAEMQRYIREAIAQQEALGLDVLVHGEPERNDMVEYFGEQLAGFCFTENGWVQGYGSRCVKPPIIYGDVERLKPMTMEWTTYAQQQTNRPLKGMLTGPVTMLCWSFVRDDQPRSATCKQIALAIRDEVQDLEQAGIKIIQVDEAALREGLPLRKSAWREYLGWAVDAFRLTASGVADSTQIHTHMCYSEFNHIAEWIAKMDADVISIEASRSNMELLGVLESFTYPNDIGPGVYDIHSPRVPSVAEMVELLRKASEVIPLERLWVNPDCGLKTRAWPETLASLRNMVAAAQKLRFFARG", - "output": "5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity ; zinc ion binding ; methionine biosynthetic process ; methylation" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MNPVYSPGSSGVPYANAKGIGYPAGFPMGYAAAAPAYSPNMYAGPNPAFQPGYTPGTPYKVSCSPTSGTVPPYSSSPNPYQTAVYPVRSAYPQQNPYAQQGAYYTQPLYAAPPHVIHHTTVVQPNGMPATMYPAPIPQPRGNGVAMGMVAGTTMAMSAGTLLTSHYPTPVAPHQVTMPTYRPPGTPTYSYVPPQW", - "output": "axon ; perinuclear region of cytoplasm ; plasma membrane" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MIEAITHGAEWFIGLFQKGGEVFVGMVTGILPLLISLLVIMNALIVFVGQRRIEKLAQKCAGNPVTRYLVLPFIGTFVFCNPMTHSLGKFLPEKYKPSYYAAASYSCHSMNGLFPHINPGELFVYLGIANGLTTLGVPLGPLAVSYLLVGLITNFFRGWVTDLTTSVFEKKMGIKLDKSVHL", - "output": "plasma membrane ; phosphoenolpyruvate-dependent sugar phosphotransferase system" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MGGYKGIKADGGKVDQAKQLAAKTAKDIEACQKQTQQLAEYIEGSDWEGQFANKVKDVLLIMAKFQEELVQPIADHQKAIDNLSQNLAKYDTLSIKQGLDRVNP", - "output": "extracellular region" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MVKKVLLINGPNLNLLGTREPEKYGTTTLKDIEMEAHQQVAKHQDAELFTYQNNTEGFIIDRIQEAKQQGVGFIIINAGAYTHTSVGIRDALLGTAIPFIEVHITNVHQREPFRHHSYLSDKAIAVIAGLGVYGYTAAIEYALNY", - "output": "3-dehydroquinate dehydratase activity ; 3,4-dihydroxybenzoate biosynthetic process ; quinate metabolic process" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MTQMTDAKNNIITKEMEFVAKEENIAVEKIRKWVAKGFVVIPKNIHRNTKPVGIGDNLKTKVNVNLGTSTDCIDIDMEIRKAIISEEYGADAIMDLSTGGELPEIRKQILKNTTLPVGTVPMYEIGIESKNKYGRVIDFDEDIIFNTIERQAKEGVDFMTLHCGITKHTIDTLNNDDRIMGVVSRGGAYITAYIMHHQKENPLYSQFDYLLEMLKEHDVTLSLGDGMRPGCLCDHTDRPQIQELIVLGELVDRCREAGVQVMVEGPGHVPLNNVETNMKIQKTLCKNAPFYVLGPLPTDLAMGYDHITSAIGGALAAYSGANFLCYVTPAEHVRLMNEDDVREGLIASKIAAQVADVAKGNKQAWAKEKEMAIARKNHDWEKQFELSIDSDKPKKMREELPPKEEDACSVCGEYCALLMVEEAGKR", - "output": "4 iron, 4 sulfur cluster binding ; carbon-carbon lyase activity ; zinc ion binding ; thiamine biosynthetic process ; thiamine diphosphate biosynthetic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MTETINTAAQFPSFEKPTVQFNEKGWGPCELPDTFKDVPYQPFSKNDRLGKICDWTNTSNNDKKYQNKYASSFGTGNQYSYYHEEDETTFHLVDTARVQKPPHQRGRFRNMRNSRSGRGRNARGGLNTHGMTTLSGKNVKARDPRHGRGMGKKFGHRGPPPKMRESSVAVRADWASIEEMDFPRLIKLSLPNIKEGVDIVTCGTLEYYDKTYDRINVKNEKPLQKIDRIVHTVTTTDDPVIRRLSKTVGNVFATDAILATIMCSTRSNYSWDIVIEKVGDKIFMDKRDHTEFDLLTVNESSVEPPTDDDSSCNSPRNLAIEATFINHNFSQQVLKTGDQEPKFKFEESNPFISEDEDIQVASVGYRYKKWELGSDIVLVARCEHDGVLQTPSGEAQFMTIKALNEWDSKLANGVEWRQKLDTQRGAVLANELRNNACKLAKWTVQAVLAGSDQLKLGYVSRINPRDHSRHVILGTQQFKPHEFATQINLSMDNAWGILRCIIDLVMKQKDGKYLIMKDPNKPIIRLYDIPDNTFDSDDSDDGEGDDEGFQQVYNYAHNKI", - "output": "eukaryotic 43S preinitiation complex ; eukaryotic 48S preinitiation complex ; eukaryotic translation initiation factor 3 complex ; nucleus ; mRNA cap binding ; translation initiation factor activity ; cap-dependent translational initiation ; formation of cytoplasmic translation initiation complex ; regulation of translational initiation" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MASPAPPEHAEEGCPAPAAEEQAPPSPPPPQASPAERQQQEEEAQEAGAAEGAGLQVEEAAGRAAAAVTWLLGEPVLWLGCRADELLSWKRPLRSLLGFVAANLLFWFLALTPWRVYHLISVMILGRVIMQIIKDMVLSRTRGAQLWRSLSESWEVINSKPDERPRLSHCIAESWMNFSIFLQEMSLFKQQSPGKFCLLVCSVCTFFTILGSYIPGVILSYLLLLCAFLCPLFKCNDIGQKIYSKIKSVLLKLDFGIGEYINQKKRERSEADKEKSHKDDSELDFSALCPKISLTVAAKELSVSDTDVSEVSWTDNGTFNLSEGYTPQTDTSDDLDRPSEEVFSRDLSDFPSLENGMGTNDEDELSLGLPTELKRKKEQLDSGHRPSKETQSAAGLTLPLNSDQTFHLMSNLAGDVITAAVTAAIKDQLEGVQQALSQAAPIPEEDTDTEEGDDFELLDQSELDQIESELGLTQDQEAEAQQNKKSSGFLSNLLGGH", - "output": "cis-Golgi network ; endoplasmic reticulum ; endoplasmic reticulum membrane ; nuclear body ; nucleolus ; endoplasmic reticulum-autophagosome adaptor activity ; protein self-association ; collagen catabolic process ; endoplasmic reticulum organization ; mitophagy ; negative regulation of neuron apoptotic process ; reticulophagy ; sensory perception of pain ; white fat cell differentiation" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "ADVPGNYPLDTRGYSYYCTILGENEFCKKICKVHGVSYGYCYNSGCWCEYLEAKDVSVWNAAKNYCKNPVGK", - "output": "extracellular region ; sodium channel inhibitor activity ; toxin activity" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MPSKKKKYNARFPPARIKKIMQTDEEIGKVAAAVPVIISRALELFLESLLKKACQVTQSRNAKTMTTSHLKQCIELEQQFDFLKDLVASVPDMQGDGEDNHMDGDKGARRGRKPGSGGRKNGGMGTKSKDKKLSGTDSEQEDESEDTDTDGEEETSQPPPQASHPSAHFQSPPTPFLPFASTLPLPPAPPGPSAPDEEDEEDYDS", - "output": "negative cofactor 2 complex ; nucleus ; RNA polymerase II transcription regulator complex ; core promoter sequence-specific DNA binding ; identical protein binding ; protein heterodimerization activity ; RNA polymerase II general transcription initiation factor activity ; RNA polymerase II general transcription initiation factor binding ; TBP-class protein binding ; negative regulation of transcription by RNA polymerase II ; transcription by RNA polymerase II" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MATSQRKILVTSALPYANGPIHLGHMLEYIQTDIWSRYQKLRGHECHYICADDAHGTPIMLKAQQLGMAPEEMIAQVNKEHQQDFADFNIAFDNYHSTHSEENRVLASDIYLKLRANGYIKSKSISQLFDPEKSMFLPDRFVKGTCPKCKSPDQYGDNCDACGATYSPTELINPKSAVSGATPVMKDTEHFFFDLPAFEDMLKEWTRSGALQTEMANKLDEWFEQGLQQWDITRDAPYFGFEIPDAPGKYFYVWLDAPIGYMGSFKNLCDKRPELSFDEFWAKDSKAEVYHFIGKDIVYFHSLFWPAMLHGSGYRQPNSVYAHGYVTVNGAKMSKSKGTFIKARTYLDHLDPEYLRYYYAAKLSSRIDDLDLNLEDFAQRVNSDLVGKLVNLASRTAGFITKRFDGKLAKIADTTLTDAFLAKQEQIAEFYETREYGKAMREIMALADIANGFVADAAPWQLVKQDDQQEVAHQVCSNALNLFRILVTYLKPVLPRLAQDVEAFFQQTLTWDGLGQDMAGHEIAPFKAMMQRVEFDKVEAMVADSKENLQATSEPEAPKGPLATDPISDTINFDDFAKIDLRIARIVKAEHVAEADKLLKLQLDIGGETRQVFAGIKSAYSPEDLEGKLTVMVANLAPRKMRFGMSEGMVLAAGPGGSDLWILEPHEGAQPGMRVK", - "output": "cytoplasm ; ATP binding ; metal ion binding ; methionine-tRNA ligase activity ; tRNA binding ; methionyl-tRNA aminoacylation" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MLYPTPIAKLIDSYSKLPGIGIKTATRLAFYTIGMSNEDVNDFAKNLLAAKRELTYCSICGNLTDDDPCHICTDTSRDQTTILVVEDAKDVSAMEKIQEYRGYYHVLHGLISPMNGMGPDDINLKSLITRLMDGKVSEVIVATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDIEYADEVTLLRAIENRTEL", - "output": "DNA binding ; metal ion binding ; DNA recombination ; DNA repair" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MLEKYKNSKKLSRDLPQINDRIKFPKVRVIDDEGEQLGIFAPEAAIQLATKQGLDLVLVSDKSDPPVCRILDYGKYKFTQEKRAREAKKKQHNSSIKEVKMRYKIEEHDYKVRINQASKFLQSGDKVKATITFRGREIQHSNLAINLLNKMAADLVTIAEIQQAPSRDGRNVIMLLSPKKVN", - "output": "chloroplast ; translation initiation factor activity" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MTASYSPSISVPLVGLVFPAITMVLSFIYIERDEIV", - "output": "chloroplast thylakoid membrane ; photosystem I ; photosynthesis" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MAAPVKKTGSKKSKKNVPNGVVHIQSTFNNTIVSITDTSGHVISWSSAGASGFKGARKGTPFAAQTAAEAAAKRALDQGMRQIKVLVRGPGSGRETAIRALQVAGLEITLIRDVTPLPHNGCRRPKRRRV", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MSSSVKTPALEELVPGSEEKPKGRSPLSWGSLFGHRSEKIVFAKSDGGTDENVLTVTITETTVIESDLGVWSSRALLYLTLWFFFSFCTLFLNKYILSLLGGEPSMLGAVQMLSTTVIGCVKTLVPCCLYQHKARLSYPPNFLMTMLFVGLMRFATVVLGLVSLKNVAVSFAETVKSSAPIFTVIMSRMILGEYTGLLVNLSLIPVMGGLALCTATEISFNVLGFSAALSTNIMDCLQNVFSKKLLSGDKYRFSAPELQFYTSAAAVAMLVPARVFFTDVPVIGRSGKSFSYNQDVVLLLLTDGVLFHLQSVTAYALMGKISPVTFSVASTVKHALSIWLSVIVFGNKITSLSAVGTALVTVGVLLYNKARQHQQEALQSLAAATGRAPDDTVEPLLPQDPRQHP", - "output": "Golgi apparatus ; membrane ; antiporter activity ; blastocyst hatching" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MAYSACFLHQSALASSAARSSSSSSSQRHVSLSKPVQIICKAQQSHEDDNSAVSRRLALTLLVGAAAVGSKVSPADAAYGEAANVFGKPKTNTDFLPYNGDGFKVQVPAKWNPSKEIEYPGQVLRFEDNFDATSNLNVMVTPTDKKSITDYGSPEEFLSQVNYLLGKQAYFGETASEGGFDNNAVATANILESSSQEVGGKPYYYLSVLTRTADGDEGGKHQLITATVNGGKLYICKAQAGDKRWFKGARKFVESAATSFSVA", - "output": "apoplast ; chloroplast ; chloroplast envelope ; chloroplast stroma ; chloroplast thylakoid ; chloroplast thylakoid lumen ; chloroplast thylakoid membrane ; extracellular region ; extrinsic component of membrane ; photosystem II oxygen evolving complex ; thylakoid ; thylakoid lumen ; calcium ion binding ; mRNA binding ; poly(U) RNA binding ; protein domain specific binding ; salicylic acid binding ; photosynthesis, light reaction" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MISNAIARRYAKALVQLGAEEDAVDRFGAELGQFAALLEGNADIDSVLKSPAYRIEAKREILKDVLAKLSLSGTVSNFLQVLLDRGRISFLPQIAHSYAAFADELSGVIRPVLTSAFPLEDAQVESMKGALVKATGKKVQLSVQVEPSLIGGVITKIGDKVFDGSVRTQLNRIQDILQKG", - "output": "plasma membrane ; proton-transporting ATP synthase complex, catalytic core F(1) ; proton-transporting ATP synthase activity, rotational mechanism" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MVHLPLSRSRSGRRAVPDLSRYQQFYEADAADGYSTGSGLSSAAASVASLRRPGVGMGRTQSLTGYGRTRSLGAARPSYLGAPPRTYSMSSQRRANSLRSNNGFGPPAVAAGNTITVKTTETKDLQGRTRTVTRQTVKHINGVRYVETTTTMTMPDGEYPDDFYGFEGDFTAKQTSSGHVYQNARGAPDISDIAEEESLEEYLDARDTAPALRIQLRAPPRVQQQRQLQRQRRLSDTNFPARRSAKSSPARQSSEEPPATTKPHRIRFDETPQIVGIDPPTQKKAPKKQMTEQEMYMHALDAARKKVYGEISQPALEAKQPHRSTMSKRMTLRDEATLAANTPPERSRPAKREVRKKEGHSHHNFLSVLRRDSSPKRHAVQPSERVHNKEKTLEMTPDSSSASSYEEARFEHSDEMYNKALEVAKKKYHLTQENSTRDNGTTECPRTPMTSLMSTNVSSDTAESTLLGTPVYSSNAPFDRSPQPSSGCETGNTTPKSIPRRPSFLDKLVRFSQEKYGYRPRRSISSQGHKAEHEHVFTDDIPPLPDIPLVDPMQVKPKDVPLPTVEPALGPTDVSPARVADPESNIETPRTLAPARSSISSSPRRSSPPQAFQELVPLQSTQSETTGDLADALALGDNSLDLLPGRVSEISPKTSFEHFVLAPEVPETDEKPAAAPAVAAEAPLSNPPSVVVVPSATSSVPAAQGAAPGVAVTEGPSLGGPAAPVRALHATKTAAAPAKKRSFFHKLFKKY", - "output": "plasma membrane ; DNA recombination ; meiotic cell cycle" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MFQDNPLLAQLKQQLHSQTPRAEGVVKATEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRIIAVIHSEKERESAEPEELVEPFLTRFVGKVQGKNDRLAIVPDHPLLKDAIPCRAARGLNHEFKEGDWAVAEMRRHPLKGDRSFYAELTQYITFGDDHFVPWWVTLARHNLEKEAPDGVATEMLDEGLVREDLTALDFVTIDSASTEDMDDALFAKALPDGKLQLIVAIADPTAWIAEGSKLDKAAKIRAFTNYLPGFNIPMLPRELSDDLCSLRANEVRPVLACRMTLSTDGTIEDNIEFFAATIESKAKLVYDQVSDWLENTGDWQPESEAIAEQVRLLAQICQRRGEWRHNHALVFKDRPDYRFILGEKGEVLDIVAEPRRIANRIVEEAMIAANICAARVLRDKLGFGIYNVHMGFDPANADALAALLKTHGLHVDAEEVLTLDGFCKLRRELDAQPTGFLDSRIRRFQSFAEISTEPGPHFGLGLEAYATWTSPIRKYGDMINHRLLKAVIKGETATRPQDEITVQMAERRRLNRIAERDVGDWLYARFLKDKAGTDTRFAAEIVDISRGGMRVRLVDNGAIAFIPAPFLHAVRDELVCSQENGTVQIKGETAYKVTDVIDVTIAEVRMETRSIIARPVA", - "output": "cytosol ; exoribonuclease II activity ; RNA binding ; mRNA catabolic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MKTFGKKVVLIGDGSVGSSYAFAMVTQGVADEFVIIDIAKDKVKADVQDLNHGTVHSPSPVDVKAGEYEDCKDADLVVITAGAPQKPGETRLQLVEKNTKIMKSIVKSVMDSGFDGYFLIAANPVDILTRFVKEYTGLPAERVIGSGTVLDSARLQYLISQELGVAPSSVDASIIGEHGDTELAVWSQANVAGISVYDTLKEQTGSEAKAEEIYVNTRDAAYEIIQAKGSTYYGIALALMRISKAILNNENNVLNVSIQLDGQYGGHKGVYLGVPTLVNQHGAVKIYEMPLSAEEQALFDKSVKTLEDTFDSIKYLLED", - "output": "cytoplasm ; L-lactate dehydrogenase activity ; glycolytic process" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MQALMEDSKIKEEIWIEKYRPVRLNQVAGQDETIERLKSYVATKNLPHLLFSGPPGVGKTASAVSIAREIFGEDLWRENFTELNASDERGIDIVRNKIKNFAKTAPIGGAPFKIIFLDEADALTADAQSALRRTMERFSSNCRFILSCNYSSKIIEPIQSRCAVYRFRRLSDEAIKERLEYIAGDQGLSITEGGYEALIYVAQGDMRKAVNSLQAAAFIDTDKSISRETIYRTTATANPEEIKNLIETALRGNFRIARKELNRLLYEEGLSGEDIVGQIYRVVSEMDNLMVLDLGLTERDIVALVDVIGETDFRLTEGASEKIQLEALLAHFALSREN", - "output": "DNA replication factor C complex ; ATP binding ; ATP hydrolysis activity ; DNA binding ; DNA clamp loader activity ; DNA repair ; DNA-templated DNA replication" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "AIDYDEDEDGRPKVHVDAR", - "output": "extracellular region ; adaptive immune response ; blood coagulation ; innate immune response" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MTKQVEIFTDGSCLGNPGPGGYGAILRYKQHEKTFSAGYYLTTNNRMELMAAIVALEALTSPCEVTLSTDSQYVRQGITQWIHNWKKRGWKTADRKPVRNVDLWQRLDLAIQSHTIQWEWVKGHAGHPENERCDELARQGANSPTLDDTGYNPD", - "output": "cytoplasm ; magnesium ion binding ; nucleic acid binding ; RNA-DNA hybrid ribonuclease activity ; RNA catabolic process" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MSFRIGHGYDVHKFTSAKQNIIIGGVEIAYHLGLEAHSDGDVLIHALCDAILGALGLGDIGKHFLDTDNQFKNIDSKFFLAEIKKMLDKKQYSISNIDCTIIAQAPKMLPHIEKMRACLANILEIQISQINIKATTTERLGFIGREEGIATHVVCLLYR", - "output": "2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity ; metal ion binding ; isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway ; terpenoid biosynthetic process" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MVMMIIIYTEPEISLFPLQDRSEELSSNVENGSCNSNEGINPETSSHWIENVVKVRKPYTVTKQREKWSEEEHDRFLEAIKLYGRGWRQIQEHIGTKTAVQIRSHAQKFFSKMAQEADSRSEGSVKAIVIPPPRPKRKPAHPYPRKSPVPYTQSPPPNLSAMEKGTKSPTSVLSSFGSEDQNNYTTSKQPFKDDSDIGSTPISSITLFGKIVLVAEESHKPSSYNDDDLKQMTCQENHYSGMLVDTNLSLGVWETFCTGSNAFGSVTEASENLEKSAEPISSSWKRLSSLEKQGSCNPVNASGFRPYKRCLSEREVTSSLTLVASDEKKSQRARIC", - "output": "nucleus ; DNA binding ; regulation of DNA-templated transcription" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MHTTLLSNSMRGAALCTRVSSTTLNPVTLQTSAIYQTISLKNQTRPSSTSTVRFLKASPTLRTSSARPQAQIATSCINAKNTISVRSNSTTSTSAREEAAKLDWNSYFKLRASRRRYTLASSIVSSAVSTVVGVQVLSSQNLENLGAQVMGLDPFVVLGMATAACGAVGWLVGPFLGNAVWGLVNRSYKKAFLVKEKEFFDRIKRYRVDPSSNSMTNPVPDYYGEKIGSVQGYRQWLKDQRAYNRKRRSFIK", - "output": "PAM complex, Tim23 associated import motor ; protein transport" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MLVNFKLMLQKAKLGKYAIPHININNYEWAKAVLTAANQANSPIIVSVSEGALKYMSGYSVVIPLVKGLIESLSVKVPVTLHLDHGSYDACIQALQAGFSSVMFDGSHLPFEENFNKSKKLIEIAQKTNASVELEVGTIGGEEDGVIGQGELANVDECKQIASLKPDALAAGIGNIHGIYPKNWKGLNFPLIETISKITNLPLVLHGGSGILENDVKKAISLGICKLNINTECQLAFAHEIRKYIESNKDLDLNKKGYDPRKLLKEPTQAIVDTCLEKIDLCGSRNKA", - "output": "cytosol ; fructose-bisphosphate aldolase activity ; zinc ion binding ; fructose 1,6-bisphosphate metabolic process ; glycolytic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MASLKRFQTLVPLDHKQGTLFEIIGEPKLPKWFHVECLEDPKRLYVEPRLLEIMFGKDGEHIPHLESMLHTLIHVNVWGPERRAEIWIFGPPPFRRDVDRMLTDLAHYCRMKLMEIEALEAGVERRRMAAHKAATQPAPVKVREAAPRPASVKVPETATQPAPVKVREAAPQPAPVQEVREAAPQQASVQEEVREAATEQAPVQEVREAATEQAPVQEVSEAATEQAPVQEVNEAATEQASVQAVREAATRPAPGKVRKAATQPAPVQVCQEATQLAPVKVREAATQPASGKVREAATQLAPVKVRKAATQLAPVKVHEAATQPAPGKVSDAATQSASVQVREAATQLSPVEATDTSQLAQVKADEAFAQHTSGEAHQVANGQSPIEVCETATGQHSLDVSRALSQKCPEVFEWETQSCLDGSYVIVQPPRDAWESFIIL", - "output": "cell cortex ; centrosome ; chromosome ; cytoplasm ; mitochondrion ; nucleus ; protein-containing complex ; subcortical maternal complex ; RNA binding ; actin filament organization ; establishment of organelle localization ; mitotic spindle assembly ; mitotic spindle assembly checkpoint signaling ; negative regulation of apoptotic process ; positive regulation of dendrite development ; positive regulation of double-strand break repair ; positive regulation of double-strand break repair via homologous recombination ; positive regulation of embryonic development ; positive regulation of neurogenesis ; protein phosphorylation ; regulation of protein localization ; replication fork processing" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MSQTHLSTKKFADFPLKPEILAALNENGFEFCTPIQALSLPILLNAKDIAGQAQTGTGKTMAFLVATFNHLLNVAAPESRKATEPRAIIMAPTRELAIQIAKDAKLLAAHTGLKVGIVYGGESYETQRAVLDKGVDILIGTTGRIIDYVRQGVISLSHIQAVVLDEADRMFDLGFIKDIRFLFRRMPDAKSRLNMLFSATLSMKVQELAYDHMNDPEKVEIEPLEKTSKNIKEEIFYPSMEDKMRLLLSLIEEDWPDKAIVFSNTKHSCEKLWSYLEGDGHRVGLLTGDVPQKKRIRILEQFTSGEIDVLVATDVAARGLHISDVSHVYNYDLPDDCEDYVHRIGRTGRAGQKGISISFACEEYALNLPEIETYINHSIPVSNYDKDALLDDIPPPARIHRKPPTSRTRDGGSKGAHRSGGNTSRPPRHRTRRP", - "output": "cytoplasm ; ATP binding ; ATP hydrolysis activity ; RNA binding ; RNA helicase activity ; RNA catabolic process" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MNYLPAPPPGTTPLRVLSIAGSDSGGGAGIQADMRTMTVLGVHACTAVTAVTIQNTLGVEGFHEIPAEIVASQIKAVVTDIGIQSAKTGMLASSSIIAAVAETWLRLELTTPLVVDPVCASMHGDPLLTGEAMDSLRDRLFPLATVVTPNLDEVRLLVGIDVVDTESQRAAAMALHALGPQWALVKGGHLRSSDRSCDLLYGGSSAGVAFHEFDAPRVQTGNDHGGGDTLAAAVSCALAHGYTVPDAVGFGKRWVTECLRDAYPLGRGHGPVSPLFQRT", - "output": "ATP binding ; hydroxymethylpyrimidine kinase activity ; phosphomethylpyrimidine kinase activity ; phosphorylation ; thiamine biosynthetic process ; thiamine diphosphate biosynthetic process" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MSIEVANESGIDVSEAELVSVARFVIAKMDVNPCAELSMLLLDTAAMADLHMRWMDLPGPTDVMSFPMDELEPGGRPDAPEPGPSMLGDIVLCPEFAAEQAAAAGHSLGHELALLTIHGVLHLLGYDHAEPDEEKEMFALQDRLLEEWVADQVEAYQHDRQDEKDRRLLDKSRYFDL", - "output": "cytoplasm ; metalloendopeptidase activity ; RNA endonuclease activity ; zinc ion binding ; rRNA processing" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MLKPISALNDNYIWVYGRENCPVIVVDITEIEPLLPFLRENKFAVEAVLLTHKHDDHVGGVAAFKRYFPDVPVYGPQECADKGATRIVNEGEIVTANYRIRVIPTGGHTAQHVSYVTDGCLFCGDTLFSAGCGRVFTGNYGQMYDSVQRLKTLPDDTLVCPAHEYTLANLAFAESVMKDKSAVKNQRVLVEKKRAENRPSVPTTLGLEKQINPFLIAENPAQFETWRKAKDQF", - "output": "hydroxyacylglutathione hydrolase activity ; metal ion binding ; methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MNKDINIAAIIKNEIENFEGKIQNHDIGKVIIVGDGVALVSGIEKVKFGELVEFENNVLGIALNLEQDLIGVVIMASENSVFQGSIVRRTKSVISITVGDQLLGRVVNALGIPIDGKAELDNSLKSAIFTNAPSIMDRKSVDRGLKTGILAIDSLVPIGKGQRELIIGDRQTGKTTIAIDAILNQKGKNVYCVYVAIGQKNSSVAQIVSLLEKKGAFEYTTVILAGASELSPLQYLAPYSGAAIAEYWMNKKKDVLIIYDDLSKHAIAYRTLSLLLRRPPGREAFPGDIFYQHSYLLERSAQLSNDKGGGSITALPIIETQAGDISAYIPTNVISITDGQIFLRDSLFNSGQKPAIDIGLSVSRVGSAAQTNLMKWASSSLKLNLAQYNELKAFAQFGSDLGPSSQLILDRGNKIYEILKQENQYPLTERQQIMLLILIRENLIDSLEQKSIPLFKSAFLKYCDSEPKFRDKIEKMDYNRVLEPNNLAGILKDITDFIEKFNLGNVF", - "output": "plasma membrane ; proton-transporting ATP synthase complex, catalytic core F(1) ; ATP binding ; proton-transporting ATP synthase activity, rotational mechanism ; proton-transporting ATPase activity, rotational mechanism" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MHLNPSEISELIKSRIEGLEATAEVRTQGTVVSVTDGIVRIHGLSDVMQGEMLEFPGNTFGLALNLERDSVGAVVLGEYEHITEGDTVKCTGRILEVPVGEELIGRVVNALGQPIDGKGPITTKHSEPIEKIAPGVVWRQSVNQPVQTGLKAIDAMVPIGRGQRELIIGDRQTGKTAVAVDAIINQKGENMICIYVAIGQKASSISNVVRKLEEHGAMEYTIVVAATASESAAMQFIAPYSGCTMGEYFRDTGRDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVSAAYVEKETNGAVKGKTGSLTALPVIETQAGDVTAFVPTNVISITDGQIFLESDLFNAGIRPAINAGISVSRVGGAAQTKVIKKLGGGVRLALAQYRELAAFAQFASDLDEATRKQLERGKMVTELMKQPQYSTLSVSEMALTLFAVNKGYLDDVEVSRALAFESALRGFIRSKYGAILDKIETTKDLDAETEKELDAAIQDFKKNGTY", - "output": "plasma membrane ; proton-transporting ATP synthase complex, catalytic core F(1) ; ATP binding ; proton-transporting ATP synthase activity, rotational mechanism ; proton-transporting ATPase activity, rotational mechanism" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MLVKADMTKDIAQVMAEVGRKAKAAAAPLSIATSEQKNKALNAAADAILEARADILEANRLDLANAEKNGMAASFVDRLTLNEARIDAIAEGIRAIATLPDPVGEVIAEWDRPNGLHIERVRTPLGVIGVIYESRPNVTADAGALCLKAGNAVILRGGSDSAHSSAAIHKALEAANLPADAIQIVPVTDRAAVGEMLKGLGGAIDVIVPRGGKSLVARVQSEARVPVFAHLEGICHLYIDKSADLDMARRIALDAKMRRTGICGAAETLLVDRAVASTHLAPILGDLAAGGCEIRGSAEVLALYPAAKPATEEDWSTEYLDAIISVALVDGISGAIDHINRYSSHHTEAIVAEDAQTVARFFNEIDSAILLHNASTQFADGGEFGMGAEIGIATGKMHARGPVGVEQLTSFKYRVRGSGQVRG", - "output": "cytoplasm ; glutamate-5-semialdehyde dehydrogenase activity ; NADP binding ; L-proline biosynthetic process" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MSLTRLHIETFRNISSAQLHPSDGLNLIYGQNGSGKTSVLEAIYFLGMGRSFRSHLSQRVIQHQDDKLTLFANLSLGEQESKIGLRRFRSGETEVKINGDKIKRLSTLAETLPIQVITPESFSLLFEGPKSRRQFIDWGAFHSDKSFHSAWANVKRILKQRNQLLKNQVSYSQIQFWDKELVRYSELVTLIRKEYVDSLNEQLKGIIVEFLPQVEVKVSFTRGWDSKTDFGQLLETQYLRDVAAGNTGSGPHKADLRLRVGTLPVQDALSRGQLKLLVCALRIAQGKLLKQQTDKNSIYLVDDLPSELDAKHRQLLLQQLMDTGAQIFVTAIDPAAIVDSLTTPPSKMFHVEQGCVTVIDKPTRE", - "output": "cytoplasm ; ATP binding ; single-stranded DNA binding ; DNA repair ; DNA replication ; SOS response" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MPGLSCRFYQHKFPEVEDVVMVNVRSIAEMGAYVSLLEYNNIEGMILLSELSRRRIRSINKLIRIGRNERVVVIRVDKEKGYIDLSKRRVSPEEAIKCEDKFTKSKTVYSILRHVAEVLEYTKDEQLESLFQRTAWVFDDKYKRPGYGAYDAFKHAVSDPSILDSLDLNEDEREVLINNINRRLTPQAVKIRADIEVACYGYEGIDAVKEALRAGLNCSTENMPIKINLIAPPRYVMTTTTLERTEGLSVLSQAMAVIKEKIEEKRGVFNVQMEPKVVTDTDETELARQMERLERENAEVDGDDDAEEMEAKAED", - "output": "cytoplasm ; cytoplasmic stress granule ; RNA binding ; translation initiation factor activity ; cellular response to amino acid starvation ; cellular response to UV ; negative regulation of translational initiation in response to stress ; PERK-mediated unfolded protein response ; response to endoplasmic reticulum stress" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MSNVDRAEIAKFEALAHRWWDRESEFKPLHDINPLRVNWIDERANLAGKKVLDVGCGGGILSEAMALRGATVTGIDMGEAPLAVAQLHQLESGVSVEYRQITAEDLAEEMPEQFDVVTCLEMLEHVPDPSSVIRACHRMVKPGGQVFFSTINRNPKAYLFAVVGAEYILNLLPRGTHDFKKFIRPSELGAWSRDAGLQVKDIIGLTYNPLTKHYKLASDVDVNYMIQTLREA", - "output": "cytoplasm ; 2-polyprenyl-6-hydroxyphenol methylase activity ; 2-polyprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity ; 3-demethylubiquinone-9 3-O-methyltransferase activity ; methylation ; ubiquinone biosynthetic process" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MARIAGVDLPREKRIEVSLQYIYGIGKTSAKLILERANVSPVTRTKDLTDDEVRRIRETIEQNVKVEGDLRREISLNVKRLMDLGCYRGLRHRKGLPVRGQRTHTNARTRKGPKKGLVRKAAAPAPKA", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; tRNA binding ; translation" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MAMNFVTFNQDYSYLAVATSKGFRIFTTDPFAKSYETKEGHIAIIEMLFSTSLVALILSPRRLQITNTKRQSTICELTFPTTVLAVKLNRKRLVIVLEDQIYLYDIQTMKLLYTIQTSPNPNAICALSPSSDNCYLAYPLPQKAPPSSFTPPSHAPPGNTHVSPTSGEVLIFDSLKLEAINVIEAHRSPLACITLNSDGTLLATASDKGTIIRVFSVPDGHKLYQFRRGSMPSRIFSMSFNTTSTLLCVSSSTETIHLFKLSQQTSSSRDTSPSSSTPAGRDRAFSQSSLGHSPDRSDVSGEPDSSEFPARKHNGTLMGIIRRTSQNVGSTVAAKVGGYLPKGVSEMWEPARDFAWIKLPKPSQNAGGSGNNGPLRSVVAMSNNTPQVMVITSDGNFYVFSIDLSKGGEGTLTKQYS", - "output": "endosome membrane ; phagophore assembly site membrane ; vacuolar membrane ; autophagy ; protein transport" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MKILVDENMPYVEPLFGDLGDIIPVNGRTLTAEQVRDADVLLVRSVTKVNAELLSGNNKLKFVGSATIGTDHVDLAYLAERNIPFSNAPGCNATAVGEFAFIAMLELAQRFNSPLKGKVVGIVGAGNTGTATAKCLQAYGIKVLLNDPIKAAEGDPRSFVSLDTITAQADIISLHVPITRTGEHKTKHLFDEARLKALKPNTWLVNCCRGDVIDNQALIKVKRQRDDLKLVLDVWEGEPTPLPELVPLAEFATPHIAGYSLEGKARGTFMLYQKLCQLLNITADKSLLDLLPTFNIKAVELATAPNEKALLQLARFVYDLRDDDKMFRNTFLNENGFDTMRKNHQHRREFSALALAYDGQSEVDWLSNLGFSGVGQ", - "output": "cytoplasm ; 4-phosphoerythronate dehydrogenase activity ; NAD binding ; protein dimerization activity ; pyridoxine biosynthetic process" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MAGWELLKLLLDDVQEHSTLIGKVWLTVLFIFRIFILSVAGESVWTDEQSDFICNTQQPGCTNVCYDQAFPISHVRYWVLQFLFVSTPTLIYLGHMVYLSKKEEKERQKENESRILVANEAQTEVHSSATKKIRIQGPLMCTYTTSVVFKSIFEAGFLLGQWYIYGFVMSPIFVCERIPCKHKVECFVSRPMEKTIFIIFMLVVSLISLLLNLMELIHLSFKCFQHGIKEGATCSPTGIPFNGAGNRMPPQEYTNPPSSNQDIDLPSYNKMSGGHNWSRIQMEQQVNGLVKPKCQCDCWSQSAISVVVSGAPGIISNMDAVKSNHQTSSKQQYV", - "output": "connexin complex ; cell communication" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MKIQDYTKQMVDEKSFIDMAYTLLNDKGETMNLYDIIDEFRALGDYEYEEIENRVVQFYTDLNTDGRFLNVGENLWGLRDWYSVDDIEEKIAPTIQKFDILDADDEEDQNLKLLGEDEMDDDDDIPAQTDDQEELNDPEDEQVEEEINHSDIVIEEDEDELDEDEEVFEDEEDFND", - "output": "DNA-directed RNA polymerase complex ; DNA-directed 5'-3' RNA polymerase activity ; DNA-templated transcription ; regulation of DNA-templated transcription" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MGNKRIKAMMILVVMIMMVFSWRICEADSLRRYSSSSRPQRFFKVRRPNPRNHHHQNQGFNGDDYPPESFSGFLPKTLPIPHSAPSRKHNVYGLQRTNSRSSYFWTHAHLS", - "output": "extracellular space ; floral organ abscission" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MAYNQEDSKRLSDKYKKEGHFDKLKREILSNPWNNTEENSESFEQALRKRVASTVKEMVNEDEELIFKNRGLTSALIESQLVKDNYLKLGSKMEGDNGDGEKKFDLDVYVRSKLQDPKLLEMIKGQLQETLNSYEEEANGST", - "output": "chromosome, telomeric region ; nucleus ; Set1C/COMPASS complex ; histone H3-K4 methylation ; subtelomeric heterochromatin formation" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MAKHVTTREKRRARIRRKISGTELRPRLTIYKSLKHMYAQLVDDVAGKTLVSVATTSKSLKGELGDEDKTAAAKKVGEALAKAAKAKGIEQVVFDRNGFDYHGRVEAVAAAAREAGLKF", - "output": "cytoplasm ; ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MITIKKGLDLPIAGTPAQVIHNGNTVNEVATLGEEYVGMRPSMKVREGDVVKKGQVLFEDKKNPGVVFTAPASGTVVTINRGEKRVLQSVVIKVEGDEQITFTRYEAAQLASLSAEQVKQNLIESGLWTAFRTRPFSKVPALDAIPSSIFVNAMDTNPLAADPEVVLKEYETDFKDGLTVLTRLFNGQKPVYLCKDADSNIPLSPAIEGITIKSFSGVHPAGLVGTHIHFVDPVGATKQVWHLNYQDVIAIGKLFTTGELFTDRIISLAGPQVKNPRLVRTRLGANLSQLTANELNAGENRVISGSVLSGATAAGPVDYLGRYALQVSVLAEGREKELFGWIMPGSDKFSITRTVLGHFGKKLFNFTTAVHGGERAMVPIGAYERVMPLDIIPTLLLRDLAAGDTDSAQNLGCLELDEEDLALCTYVCPGKNNYGPMLRAALEKIEKEG", - "output": "oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor ; sodium ion transport" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MENKKTIYFLCTGNSCRSQMAEAWGKQYLGDKWNVYSAGIEAHGVNPNAIKAMNEVNIDITNQTSDIIDANILNRADLVVTLCSHADAVCPSTPPHVNRVHWGFDDPAGKEWPEFQRVRDEIGERIKRFSETGE", - "output": "cytoplasm ; arsenate reductase (thioredoxin) activity ; protein tyrosine phosphatase activity ; response to arsenic-containing substance" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MKKIKILLDTMGYENTLEHVIKAAKDFYYQHEDDLEIILVGNEQLIKPLLDNDWRLFPIVHTEVSIEQNDTILSARKKQNSSMHLALRYLKDKQANGMLTAGNSAVFVYNAYATIGLLEHIKKPAFMPFVPTIDGGVTNLLDVGASIDLDGRDLFNFAIMANTIAKMRTPNPRVGVLNIGTEDHKGLPYHQEANELLKTSNLNYVGFVEPKTILEREVDVLVADGFSGNIALKTMEGVGKTISNFLKNEYKKPKNLFAALLSKPIFKKMKKAFDYKEHAGAFVLGLDGILVKTHGSADYQQFMSALKILYETIKADVLNEIKKDLNNYYGQ", - "output": "cytoplasm ; phosphate:acyl- acyltransferase activity ; fatty acid biosynthetic process ; phospholipid biosynthetic process" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MDDWKPSPLIKPFGARKKRSWYLTWKYKLTNQRALRRFCQTGAVLFLLVTVIVNIKLILDTRRAISEASEDLEPEQDYDEALGRLEPPRRIGSGPRRVLDVEVYSSRSKVYVAVDGTTVLEDEAQEQGRGIHVIVLNQATGHVMAKRVFDTYSPHEDEAMVLFLNMVAPGRVLICTVKDEGSFHLKDTAKALLRSLGSQAGPALGWRDTWAFVGRKGGPVLGEKHSKSPALSSWGDPVLLKTDVPLSSAEEAECHWADTELNRRRRRFCSKVEGYGSVCSCKDPTPIEFSPDPLPDNKVLNVPVAVIAGNRPNYLYRMLRSLLSAQGVSPQMITVFIDGYYEEPMDVVALFGLRGIQHTPISIKNARVSQHYKASLTATFNLFPEAKFAVVLEEDLDIAVDFFSFLSQSIHLLEEDDSLYCISAWNDQGYEHTAEDPALLYRVETMPGLGWVLRKSLYKEELEPKWPTPEKLWDWDMWMRMPEQRRGRECIIPDVSRSYHFGIVGLNMNGYFHEAYFKKHKFNTVPGVQLRNVDSLKKDAYEVEVHRLLSEAEVLDHSKNPCEDSFLPDTEGHTYVAFIRMEKDDDFTTWTQLAKCLRIWDLDVRGNHRGLWRLFRKKNHFLVVGVPASPYSMKKPPSITPIFLESPPKEEGGPGAAEQT", - "output": "Golgi membrane ; membrane ; acetylglucosaminyltransferase activity ; beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase activity ; manganese ion binding ; O-glycan processing ; protein O-linked glycosylation" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MDIEETIYKYALTNAIEHGNKCQVGSVIGMVMSKNPEMRKDPKTVSQLAGKLVAKVNNLTPEEQQKEVESLGGLEQHTKKEEKPKGLPELKNTEDKKVTLRFAPNPSGPLHIGHARAAILNKLYQEKYNGKLILRIEDTDPKRVEPDAYDAIPQDIKWLGIEPDEIYTQSDRLEIYYEYAQKAIEIGAAYMCKCDGGEFKKLKDNCQPCPCRSHTIEENMELWNNFENMEEGEAVLRIKTDINHKNPAIRDWVAMRIVNQEHPRLGNKYKIYPMMNFSVTVDDHLMGMTHVLRGKDHLANSEKQTYLYKHFGWDVPEFIHYGRLKMDDVELSTSKAREGIENKTYTGWDDPRLGTIRAIARRGIKKEVLYDLIEEIGTKQADATISWKKIYGLNRNIIEENTNRYFFIPNAVKVDVENLPSSKTNMTVERELHYNKPEKGFRNLTFNGSVYIPEDDYKHAQDKNIPLRLMDLINIKIEEDKVIYDSETLEDAQAQHARIIQWAPVETSISATVVMPDNTHVTGYIECDASNLEVDDMVQLERFGFARVDKINDNEITFYYTHN", - "output": "cytoplasm ; ATP binding ; glutamate-tRNA ligase activity ; glutamyl-tRNA aminoacylation" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MEDETVALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLRYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPINPKSNREKMTQIFFETFNAPAFYVSIQAVLSLYASGRVTGIVLDSGDGVTHVVPIYSGFSLPHAIMRLDMAGRDLTDYLMKILSERGYSFTNSAEREIVRDIKEKLCYVALDFEQELQTASQSSSLEKSYELPDGRVITIGNERFRAPEALFHPSMLGLEAAGIHETTFNSIMKCDVDVRKDLYGNIVMSGGTTMYPGIAERMHKEISALAPTSIKVKITAPLERKYSVWIGGSILASLGTFQQMWISKQEYDEAGPTIVHRKCY", - "output": "cytoplasm ; cytoskeleton ; ATP binding ; hydrolase activity" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MTIAFQLAVFASIAIPFILVIGVPVVLASPDGWSSSRNVVFSGASSWIGLVFLVGILNSLIS", - "output": "chloroplast thylakoid membrane ; photosystem II reaction center ; photosynthesis ; photosystem II stabilization" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MSMKGKETMSEQNERIVMGKLGSTYGIRGWLKVFSYTDNAESIFDYSPWYLKLKGEWVEYKVESWKRHGQGYVCKLAGLDVREDAQLMTNFEIAIDPASLPELSEDEFYWRELFGMQVFTTKGYNLGEVTDLLETGSNDVLVIKANLKDAFGQKERLIPYLEEQVIKKVDREARRIEVDWDPGF", - "output": "cytoplasm ; ribosome ; ribosome binding ; ribosomal small subunit biogenesis ; rRNA processing" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "LQDIINEFGGAMPQTFGVPVEEIVRGIKMGVRKVNIDTDCRMRMTGQFRRIAEQNKAEFDPRKFLKPAMDAMRDLCKARLEAFGTAGHASKIKVIPMDDMAKRYASGSLAPKTN", - "output": "fructose-bisphosphate aldolase activity ; zinc ion binding ; glycolytic process ; reductive pentose-phosphate cycle" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MYRTHTCGELNIKDVGKKVVLSGWVDRIRDLGGIKFIILRDRYGVTQVVVNPESPAYEISQKIGREWVIQIEGTVSERPESTKTETQTGEIEVIVEKINVLSKAELPPFYPGDKVSEDLRLKYRYLDLRDKNMNKNLIIRHKMAQAAREFLNKHGFLEIETPYLTKSTPEGARDFLVPSRLQKGKFYALPQSPQLFKQLLMVSGFDKYYQFARCFRDEDLRADRQPEFTQIDIEMSFVEMEDVINLMENFVRYVYSSVGIKLPEKFDRITYDEAMEIYGSDKPDRRFGMELKDLTNYFKDTDFKIIKNVINNGGSIKGFITQIPISRKIASELESYVKEFGLGGLLWFKLENGEISSPTNKFLGGSYENISKDYNLKDGDVVLLAAHTNREQLNTALGALRLRIAKEHFKNLEEGFDALWVVDFPFLEWNEEEKRYVARHHPFTMPKNIDSKPEDIKAYAYDMILNGNEIGGGSIRIHNSEIQRKVFEIIGLTNKEAEEKFGFLLEALKYGAPPHGGIAFGFDRMVSIALRTSSIRDVIAFPKTTSGTCQLTGAPSSVDKSQLEELSIKLFDIKEGGDENE", - "output": "cytoplasm ; aspartate-tRNA ligase activity ; ATP binding ; nucleic acid binding ; aspartyl-tRNA aminoacylation" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MMEETTKIPQATAKRLPLYHRYLKYLDESGKERVSSAELSEAVKVDSATIRRDFSYFGALGKKGYGYNVSYILDFFSKTLSQDKQTNVALIGVGNLGTALLHYNFMKNNNIKIVAAFDVDPAKVGSVQQDIPIYHLNDMEEIVRENGVEVVILTVPADEAQVTVDRLIEADVKGILNFTPARISVPKQVRVHHIDLTTELQTLIYFLENYPAKTE", - "output": "cytoplasm ; DNA binding ; DNA-binding transcription factor activity ; negative regulation of DNA-templated transcription ; response to redox state" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MRLVVCLVFLASFALVCQGQVYKGGYTRPIPRPPPFVRPLPGGPIGPYNGCPISCRGISFSQARSYCSRLGRCCHVGKGYSG", - "output": "cytoplasm ; chitin binding ; defense response to bacterium ; defense response to fungus ; killing of cells of another organism" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MAKLALIEREKKRAKLAAKFAPKRAALKAIIDDQEKSEEERYMARLELQQLPRNANPTRQRNRCAITGRPRGTFRKFGLARNKIREIAFKGEIPGLTKASW", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAWKHSRMFFGKNKVMMVALGRSPSDEYKDNLHQVSKRLRGEVGLLFTNRTKEEVNEWFTKYTEMDYARAGNKAAFTVSLDPGPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDSQSGRFQQMGDDLPESASESTEESDSEDDD", - "output": "cytoplasm ; nucleolus ; preribosome, large subunit precursor ; RNA binding ; nuclear-transcribed mRNA catabolic process ; ribosomal large subunit assembly ; ribosomal large subunit biogenesis ; rRNA processing" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MKEVSLRGISKTFGQLTVLDRIDLEIHSGEFLVLVGPSGCGKSTLLRMVAGLEPISGGDLVIGGERANELPPQKRNIAMVFQSYALFPHMTARENIGFGPRIRGEKAAETAAKVDHAASILNLHSYLDRYPRQLSGGQRQRVAMGRAIVREPSVFLFDEPLSNLDAQLRVQMRTEIKALHQRLKSTVIYVTHDQIEAMTMADRIVVMNQGKIQQIGAPLDLYDRPANKFVAGFIGSPSMSFIPGTVADGFFCTGEGEKIAVSAAAKGARAAEAGIRPENFVIAREGAGLTLVVEVIEPTGPETHIYGRIAGEPVRAVFRERIQLAPGEQVPVTAGSEHIHLFDKESGLPL", - "output": "ATP-binding cassette (ABC) transporter complex ; ABC-type transporter activity ; ATP binding ; ATP hydrolysis activity ; carbohydrate transport" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MANTLVGRKRIRKFFGKIREVAEMPNLIEVQKASYDQFLMVDEPEGGRPDEGLQSVFKSVFPISDFSSTALLEFVKYTFEAPKYDVDECRQRGITFAAPLKVTLRLIVFDVDPDTGAKSVKDIKEQDVYMGDMPLMTENGTFIVNGTERVIVSQMHRSPGVFFDHDKGKTHSSGKLLFAARIIPYRGSWLDVEFDAKDIVYARIDRKRKIPVTSLLFALGLDGEEILSTFYNRITYARDGRDWRVPYDAERLKGFKATTDLIDADSGEVVLEAGKKLTARAARQIAEKGTKALRATDEDLVGQYIAEDMVNYKTGEIYAEAGDEISEKLLKGLSDVGIEEIPVLDIDHVNVGPYIRNTLAVDKNSAREGALFDIYRVMRPGEPPTLDTAEAMFHSLFFDAERYDLSAVGRVKMNMRLDLDAPDTMRTLRREDMLAVVKALVDLRDGKGEIDDIDHLGNRRVRSVGELMENQYRLGLLRMERAIKERMSSVDIDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQTNPLSEVTHKRRLSALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATFARVNKYGFIETPFRRVRGGVVTDEVVYLSAMEEAKYYVAQASAAMDAERRLTEDLVVCRRAGEVIVVAPDRVDLMDVSPKQLVSVAAALIPFLENDDANRALMGSNMQRQAVPLVRADAPFVGTGMEAVVARDSGAAIAARRAGVIDQVDATRIVIRATEETDPTKPGVDIYRLQKFQRSNQSTCITQKPLVRVGEVVKKGDIIADGPSTEFGELALGRNVLVAFMPWNGYNFEDSILLSERIVKDDVFTSIHIEEFEVMARDTKLGPEEITRDIPNVSEEALKNLDEAGIVYIGAEVHAGDILVGKITPKGESPMTPEEKLLRAIFGEKASDVRDTSLRVPPGVTGTIVEVRVFNRHGVDKDERAQAIEREEIERLAKDRDDEQAILDRNTYARLADVLVGQSPVAGPKGFKKDTLLTREVLADYPRSQWWQFAVVDDRMMTEIEAMQKQYDESKKRLEQRFLDKVEKLQRGDELPPGVMKMVKVFVAVKRKIQPGDKMAGRHGNKGVVSRIVPIEDMPFLEDGTHADIVLNPLGVPSRMNVGQILETHLGWAAAGLGRQVAQAVDAYLRNQDAQPLREQMSRIYSPSELEGLSDRELAEVGNNLRRGVPMATPVFNGAKEADIEAMLEMAGLDRSGQSTLYDGRTGEPFDRKVTVGYIYMLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVAGRTKVYEAIVRGDDTFEAGIPESFNVLVKEMRSLGLNVELISSKRAANDQLEAPPEAAE", - "output": "DNA-directed RNA polymerase complex ; DNA binding ; DNA-directed 5'-3' RNA polymerase activity ; ribonucleoside binding ; DNA-templated transcription" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MTNIAILGTASDVGKSIVATALCRIFSNAGVDVAPYKAQNMSNNSGVTPDGFEMGRAQIVQAQAARVAPHADMNPVLLKPNTDTGAQVVLQGKVCADKSAREYFGDTQRWAEAAFESLDRLMVRHELLVIEGAGSCAEMNLYQRDFVNFKTARRAGAAVILVADIDRGGVFAQVVGTLAVIPPEDRALVKGVIINRFRGDKSLFEGGVKMLESMTGVPVLGVIPYFRGFTIDAEDAVPLSSVVDPKQEPSGDKIGVAAIYFPHISNFTDLAPLERDPSVELHYLHRPKSLDGYKALILPGSKNVRGDLAWLETMGWRDEIEKFRKRGGIIVGLCGGYQMLGASIADPYGVEGAPGASAGLAMLPVETVLEREKALCNSVGKIAGTPFFVSGYEIHMGRTALEPGASPLLEVTERNGVATDDFDGAKSADGQVTGTYFHGFFDRPEVRTWFLRLLDGGYESPRGASVADPFELLAKHFSENLDLEKLFAIAGLSVKGEKES", - "output": "ABC-type vitamin B12 transporter activity ; catalytic activity ; cobalamin biosynthetic process ; glutamine metabolic process" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MEIKGINHLLFSVSHLDTSIDFYQKVFGAKLLVKGRTTAYFDMNGIWLALNEEPDIPRNDIKLSYTHIAFTIEDHEFEEMSAKLKRLHVNILPGRERDERDRKSIYFTDPDGHKFEFHTGTLQDRLRYYKQEKTHMHFYDETAF", - "output": "cytoplasm ; magnesium ion binding ; transferase activity, transferring alkyl or aryl (other than methyl) groups ; response to antibiotic" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MSPPISPTPPPLQPPFPPTAIARGPDRPDPPPQHQQAAESLVNAAAQHVAPTCPPTSDELPQMEDQATNSSNDSLIPSRQAPDQEETENAITAGTPPDEMEPTKDAQTVRFSSSSPASYSTHEYPTEGINEPRTSSRAPNTASSQMAESSCDFRSSRDIGSIRMGASALVSALNALPWEEDDDSDDGEDDDEFIEPARGSSSTIYERKQRPQTPSTSHGFHPTHTLHFPFRQNAIARRACQPGTTELDYQYATPETSSRRTSAAGSESSSEGEVPLPKGFVSHPNLIVPSGEGEAAAHPDPKLISDRITKEQQIADVEEQAEILRSAEEQEMRLGKEFVPPKSRDSADLNVDAALREGGSEREDVIEEQMQTNEAEKRLTRNEKLAERLMEVFGLEEREEVLEEMKCWLLRSVMLKGYMYLTKRHICFFANMPNENNLLVKSGPLHKKASRSKLNTKFWVVLKNDVLSWYESTSDPYFPKGNISLQYCHSCDAVSGTRFKVRTSERNYTFTADTESSRDEWVKAIQKVMFKTQHEGETIKLIIPLEAIVDVEKSPTLEFTETIEVKCIDAEDQMSVDSYFFASFPDNDYAFSAIQKLVRERPSPPELPRISSVTTIHANQEPLDTSHATIKRHGTDSSAEKLGMASHRPFRKISSVLKPLILKSSDGEPLEEHSQGPHHNDEDASHLPHIEAISNRRRSEEESDNDYFDGYPPRQVGPPPPSMNDDARNWRPSWIRKPASKLFGSSPSGSFVSHPGRLPTDSSTTVTESGPSLRSRTGRTKQASVTEVMEPPIQYEEEVSEDEMSNKPSVVDSNSAETARKRAARLSWTSETSSGSQMVKSKSDFSMLGSESGHSESAETVRKFRTFFALSDKEELIDHFPGYLYRVLPVSGRFFISTNYFCFRSSQLLYKTKESFRLMIIPIRDLYGLKAQKAFRFGHSGLTVVIKGHEEIFIEFRSASRRKACIALLEERMEAVRLSGENTIVDSHKIEARIMEDLDESTPVEPKSPWPVSPSPLFGSTTSTSFLEFKPEPMKITCLTIGSRGDVQPYIALCKGLQAEGHITKIATHGEYKAWVEGHGIAFESVGGDPAELMQMCVDNGMFTVSFLKEGLQKFRGWLDDLLNSSWEACQGSDLLIESPSAMSGIHVAEALRIPYYRAFTMPWTRTRAYPHAFAVPEHGRGGPYNYMTYTMFDQVFWRAISGQVNRWRRNVLGLDATTFDKMEQHKVPFLYNFSPTVVPPPLDWTEWIHVTGYWFLDKADEKQGEKSWTPPQGLVDFIDKAHGEEKKVVYIGFGSIVVSDPEEMTRCVVEAVVNSGVCAILSKGWSDRGSKKGEPKGDSEGADGVKYPPEIFAIDSIDHGWLFPRIDAACHHGGAGTTGASLRAGIPTIIKPFFGDQAFWAERVESLNVGSSIRRLTSHQLASALIKATTDEKQISKARVVGEMIRKENGITRAIEAIYRDLEYAKSIIKSLPSTDDRTPERISSHLHPLTTADLSFNRVRSRSRSRSRSSQGRFSPRRHTVDDDGWSVVSGGSRSRSGSASAVTSPERRPLNIGSALGSHVFKTALLPNTFGKWRNLEEGDDR", - "output": "cytoplasm ; membrane ; brassicasterol glucosyltransferase activity ; cholesterol alpha-glucosyltransferase activity ; soladodine glucosyltransferase activity ; sterol 3-beta-glucosyltransferase activity ; UDP-glycosyltransferase activity ; carbohydrate metabolic process ; lipid glycosylation ; sterol biosynthetic process ; sterol metabolic process" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MRSHYCGDVNKSHVGQEVTLVGWVNRSRDLGGVVFLDLRDREGLVQVVYDPDLPEVFNVASTLRAEFCVQVKGVVRARPDSQVNAQMKTGEIEVLGKELTIINSSEPLPLSLDNYQNNSEEQRLKYRYLDLRRPEMAQRLMFRAKVTSAVRRFLDSNGFLDIETPILTKATPEGARDYLVPSRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMTSEQVMAKTEEMMRGLFLEMLNVDLGEFPRMTYNEAMRRFGSDKPDLRNPLELVDVADLLKEVEFAVFSGPANDEEGRVAALRIPGGASLSRKQIDDYTKFVGIYGAKGLAWMKLNDLTQGLEGIQSPVLKFLNEGIVNEIISRTGAQTGDIILFGADNATVVAESMGALRLKAGEDFNLLEGQWRPLWVVDFPMFEKINGSFHAVHHPFTAPRGVTPQELEANPANRVSDAYDMVLNGCELGGGSVRIHNQEMQSAVFRILGITDEEAKEKFGFLLEALRYGTPPHAGLAFGLDRIIMLMTGASSIRDVMAFPKTTTAACPLTNAPGFANPQQLAELGISVVKAAKTED", - "output": "cytoplasm ; aspartate-tRNA ligase activity ; ATP binding ; nucleic acid binding ; aspartyl-tRNA aminoacylation" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MDALLIQGGNPLAGEVRISGAKNAALPILTASLLTAEPLRLGNVPHLKDISTMLALLGHMGVRVTLDDKNHVTLSGDSIPHKEAPYEMVKTMRAAILVLGPTLARFGEARVSLPGGCAIGSRPVDLHIKGLQAMGADISIEHGYIHARCKRLQGARIVMDMVTVTGTENLMMAAALAEGTTVLENAAREPEVVDLARCLIAMGAKIEGAGTDVITVHGVEALHGAEYSVMADRIETGTFLVAAAMTGGRVRATHTSPDTLEAVISKLREAGAKVSVGDDWIEVESTGKLDSVDVRTAPHPAFPTDMQAQFMAMNTIAVGAASVTETIFENRFMHVQELRRLGANIEVSGHTALVRGVARLDGATVMATDLRASACLVLAGLVAAGETTIERIYHLDRGYERIEEKLTQLGGRIKRVH", - "output": "cytoplasm ; UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity ; cell cycle ; cell division ; cell wall organization ; peptidoglycan biosynthetic process ; regulation of cell shape ; UDP-N-acetylgalactosamine biosynthetic process" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MQIASSPFTHNQRSTRRIMLLVILACIPGIIAQTYFFGYGSLIQVMLAMITALLAEGAVLQLRKQPVMARLQDNSALLTALLLGISLPPLAPWWMIVLGTLFAIVIAKQLYGGLGQNPFNPAMVGYVVLLISFPVQMTSWLPPLPLQGTSVGFYDSLLTIFTGYTHSGENIHQLQVGYDGISQATPLDTFKTSLRSQPADQILQQPIFGGVLAGLGWQWVNIGFLVGGLLLLWRKAIHWHIPVSFLLALGGCAAVSWMIAPQSFASPMLHLFSGATMLGAFFIATDPVSASTTPRGRLIFGALIGILVWLIRVYGGYPDGVAFAVLLANITVPLIDHYTQPRVYGHKSGHK", - "output": "plasma membrane ; electron transport chain ; transmembrane transport" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MKSKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGNSYDARDSETNVMVHVYGPHIFHTDNETVWNYVNKHAEMMPYVNRVKATVNGQVFSLPINLHTINQFFSKTCSPDEARALIAEKGDSTIADPQTFEEQALRFIGKELYEAFFKGYTIKQWGMQPSELPASILKRLPVRFNYDDNYFNHKFQGMPKCGYTQMIKSILNHENIKVDLQREFIVEERTHYDHVFYSGPLDAFYGYQYGRLGYRTLDFKKFTYQGDYQGCAVMNYCSVDVPYTRITEHKYFSPWEQHDGSVCYKEYSRACEENDIPYYPIRQMGEMALLEKYLSLAENETNITFVGRLGTYRYLDMDVTIAEALKTAEVYLNSLTENQPMPVFTVSVR", - "output": "UDP-galactopyranose mutase activity ; O antigen biosynthetic process" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MAEKKGSSSEKLLYCSFCGKSQHEVKKLIAGPSVFICDECIDLCNEIIRDEATASEKDAAAATRSDLPTPHEIRESLDQYVIGQEQAKKILAVAVYNHYKRLKHLGKKDDVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLLQNCNYEVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQGGRKHPNQDFLQVDTTNILFICGGAFDGLEKVIMQRSDKTGIGFAAQVQSKEEREVSEVLPQTEPEDLIKFGLIPELIGRLPVVATLAKLDETALVQILIEPKNALVKQYQKLLAMEGVELEIRPAALSAIARKAIRRKTGARGLRSILEQSLMDVMYDLPNYKGVQKVVIDESTINGDAPPLLMYEEQQPKVSGSN", - "output": "ATP binding ; ATP hydrolysis activity ; ATP-dependent protein folding chaperone ; protein dimerization activity ; unfolded protein binding ; zinc ion binding" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MARFMGPRFKLARHLGVNVFGHPKALNRGVKQHKLSEYGEQLLEKQKLRAYYGVLEKQFKKIVFNALKSKEKSEDILVQSLERRLDNLVYRLGFGSTLREARQMVSHGHILVNGQKVDIPSYKVNIGDEVSLRSKSRKIQTYASNFTTIIPAVTYIEKDTESFSGRLIRLPKSVEVPVMVKYSKVLEFYSKN", - "output": "small ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MAERKPNGGSGGASTSSSGTNLLFSSSATEFSFNVPFIPVTQASASPASLLLPGEDSTDVGEEDSFLGQTSIHTSAPQTFSYFSQVSSSSDPFGNIGQSPLTTAATSVGQSGFPKPLTALPFTTGSQDVSNAFSPSISKAQPGAPPSSLMGINSYLPSQPSSLPPSYFGNQPQGIPQPGYNPYRHTPGSSRANPYIAPPQLQQCQTPGPPAHPPPSGPPVQMYQMPPGSLPPVPSSVQSPAQQQVPARPGAPSVQVPSPFLLQNQYEPVQPHWFYCKEVEYKQLWMPFSVFDSLNLEEIYNSVQPDPESVVLGTDGGRYDVYLYDRIRKAAYWEEEPAEVRRCTWFYKGDTDSRFIPYTEEFSEKLEAEYKKAVTTNQWHRRLEFPSGETIVMHNPKVIVQFQPSSVPDEWGTTQDGQTRPRVVKRGIDDNLDEIPDGEMPQVDHLVFVVHGIGPVCDLRFRSIIECVDDFRVVSLKLLRTHFKKSLDDGKVSRVEFLPVHWHSSLGGDATGVDRNIKKITLPSIGRFRHFTNETLLDILFYNSPTYCQTIVEKVGMEINHLHALFMSRNPDFKGGVSVAGHSLGSLILFDILSNQKDLNLSKCPGPLAVANGVVKQLHFQEKQMPEEPKLTLDESYDLVVENKEVLTLQETLEALSLSEYFSTFEKEKIDMESLLMCTVDDLKEMGIPLGPRKKIANFVEHKAAKLKKAASEKKAVAATSTKGQEQSAQKTKDMASLPSESNEPKRKLPVGACVSSVCVNYESFEVGAGQVSVAYNSLDFEPEIFFALGSPIAMFLTIRGVDRIDENYSLPTCKGFFNIYHPLDPVAYRLEPMIVPDLDLKAVLIPHHKGRKRLHLELKESLSRMGSDLKQGFISSLKSAWQTLNEFARAHTSSTQLQEELEKVANQIKEEEEKQVVEAEKVVESPDFSKDEDYLGKVGMLNGGRRIDYVLQEKPIESFNEYLFALQSHLCYWESEDTALLLLKEIYRTMNISPEQPQH", - "output": "COPII-coated ER to Golgi transport vesicle ; cytoplasm ; cytosol ; endoplasmic reticulum ; endoplasmic reticulum-Golgi intermediate compartment ; ER to Golgi transport vesicle membrane ; Golgi apparatus ; intracellular membrane-bounded organelle ; metal ion binding ; RNA binding ; endoplasmic reticulum to Golgi vesicle-mediated transport ; Golgi organization ; intracellular protein transport" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MTDDGYTVGDYLLDRLAELGVTEVFGVPGDYQLEFLDHVVAHPRITWVGGANELNAGYAADGYGRLRGMAALVTTFGVGELSAANAIAGSYAEHVPVVHIVGAPSKDSQAARRIVHHTLGDGDFEHFLRMSREITCAQANLVPATATREIDRVLSEVHEQKRPGYLLIATDVARFPTEPPTAPLPRHSGGTSPRALSLFTEAATQLIGEHRLTVLADFLVHRMGCVEALNKLLTADTVPHATLMWGKSLVDESSPNFLGIYAGAASEGSVREVIEDAPVLVTAGVLFTDMVSGFFSQRIDPARTIDIGVNQSVVAGQVFAPLDMAAALDALASILAERGIESPALPPAPAPQRPAAPPRDAVLTQEALWDRLAEALTPGNVVLADQGTSFYGLAGHRLASGVTFIGQPLWASIGYTLPAALGAGLADRDRRTVLLIGDGAAQLTVQELGAFGREGLTPVVVVVNNNGYTVERAIHGVTARYNDITAWRWTELPAALGVPDALTFRCATYGELDDALTVAAETQDRMVFVEVMLERMDIPPLLGELAQSASAANAK", - "output": "carboxy-lyase activity ; magnesium ion binding ; thiamine pyrophosphate binding" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MKNKLPPFIEIYRALIATPSISATEEALDQSNADLITLLADWFKDLGFNVEVQPVPGTRNKFNMLASTGQGAGGLLLAGHTDTVPFDDGRWTRDPFTLTEHDGKLYGLGTADMKGFFAFILDALRDVDVTKLKKPLYILATADEETSMAGARYFAETTALRPDCAIIGEPTSLQPVRAHKGHISNAIRIQGQSGHSSDPARGVNAIELMHDAIGHILQLRDNLKERYHYEAFTVPYPTLNLGHIHGGDASNRICAWCELHMDIRPLPGMTLNELNGLLNDALAPVSERWPGRLTVDELHPPIPGYECPPNHQLVEVVEKLLGAKTEVVNYCTEAPFIQTLCPTLVLGPGSINQAHQPDEYLETRFIKPTRELITQVIHHFCWH", - "output": "cytoplasm ; acetylornithine deacetylase activity ; zinc ion binding ; arginine biosynthetic process" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MSATTAAVPFWRAAGMTYIGYSNICAALVRNCLKEPFKSEAASREKVHFSISKWTDGKQEKPTVRTESDD", - "output": "mitochondrial inner membrane ; mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) ; proton-transporting ATP synthase activity, rotational mechanism ; proton motive force-driven mitochondrial ATP synthesis" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MKFLVSSDDTGVVKEVICNRGTDTSKQDATQPISVKNFCTEPNCSRKNRIIHMINYQEKYLVAIRIGGELSVYEIADDEYEIEDEYKYNLLHNYKLEVSSSDKPISLFTVDILEAVAVAFSSGKVFFVNFNDDKFDKEPVLVQLPGGKEIAEFSKNPSVEGIFGYGGEENDVRIVKLYESDITSEIFDTENVENNFKSEVVFTAKNVKNDHLDLRVPVWITKIRFFTEQPEKGYKFITATHYGQIRVYDTNHGRRPVRDFTVCQKPILTLTFANEEESEVIISDSHNLIAKHSLIQVDDKASKTHSASAGDIIKPVAKLLGRFVDQFGATYGVEVGEGLLVTGGLDRYLRVFDLASREIVAKVYVGVEVSSVVVLDYEEEESQEEIVGDVELLKKSEKRKRTLPVVEREESDEEDLWNQLEEKDIKRKKS", - "output": "nucleolus ; ribosomal large subunit biogenesis ; rRNA processing" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "METPFYGEEALSGLAAGASSVAGAAGAPGGGGFAPPGRAFPGAPPTSSMLKKDALTLSLAEQGAAGLKPGSATAPSALRPDGAPDGLLASPDLGLLKLASPELERLIIQSNGLVTTTPTSTQFLYPKVAASEEQEFAEGFVKALEDLHKQSQLGAATAATSGAPAPPAPADLAATPGATETPVYANLSSFAGGAGPPGGAATVAFAAEPVPFPPPPGALGPPPPPHPPRLAALKDEPQTVPDVPSFGDSPPLSPIDMDTQERIKAERKRLRNRIAASKCRKRKLERISRLEEKVKTLKSQNTELASTASLLREQVAQLKQKVLSHVNSGCQLLPQHQVPAY", - "output": "nucleoplasm ; nucleus ; protein-containing complex ; protein-DNA complex ; RNA polymerase II transcription regulator complex ; transcription factor AP-1 complex ; transcription regulator complex ; transcription repressor complex ; DNA binding ; DNA-binding transcription activator activity, RNA polymerase II-specific ; DNA-binding transcription factor activity ; DNA-binding transcription factor activity, RNA polymerase II-specific ; double-stranded DNA binding ; enzyme binding ; nuclear receptor binding ; RNA polymerase II cis-regulatory region sequence-specific DNA binding ; sequence-specific DNA binding ; sequence-specific double-stranded DNA binding ; transcription cis-regulatory region binding ; transcription coactivator activity ; transcription coregulator binding ; aging ; cellular response to calcium ion ; cellular response to hypoxia ; circadian rhythm ; negative regulation of transcription by RNA polymerase II ; osteoblast development ; positive regulation of macrophage activation ; positive regulation of osteoblast differentiation ; positive regulation of transcription by RNA polymerase II ; regulation of cell cycle ; regulation of cell population proliferation ; regulation of DNA-binding transcription factor activity ; regulation of DNA-templated transcription ; regulation of transcription by RNA polymerase II ; response to light stimulus ; response to lipopolysaccharide ; response to mechanical stimulus ; response to organic cyclic compound ; response to peptide hormone ; transcription by RNA polymerase II" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MAAPQPLALQLEQLLNPRPREADPEADPEEATRARVIDRFDEGEEEKDDLAVSSIRKLAPVSLLDTDKRYSGKTTSRKAWKEDHWEQALPSSSDNEASDEGGSEDGDSEGLGLEEISEDVDEDLEDNKISDEGGSEDGDSEGLGLEEFSEDVEEDLEGEDEEDREEDRNSEDDGVVAAFSSVKVSEEVEKGRAVKNQIALWDQLLEGRIKLQKALLTTNQLPQPDVFPVFKDKGGPEFASALKNSHKALKALLRSLVDLQEELLFQYPDTRHIVNGAKPNTESEEISSEDDELVGEKKKQRKAPPKRKLEMEDYPSFMAKRFADFTIYRNHTLQKWHDKTKLASGKLGKGFGAFERSILTQIDHIMMDKERLLRRTQTKRSAYRVLGKPEPVPEPVAETLPGEPETLPQGPANAHLRDLDEEIFDDDDFYHQLLRELIERKTSSLDPNDQVAMGRQWLAIQKLRSKIRKKVDRKASKGRKLRFHVLSKLLSFMAPIDHTAMSDDARTELFRSLFGQLNPPDADRGK", - "output": "cytoplasm ; cytosol ; Golgi apparatus ; nucleolus ; nucleoplasm ; nucleus ; small-subunit processome ; transcription regulator complex ; leucine zipper domain binding ; protein kinase binding ; tau protein binding ; cell adhesion ; DNA damage response ; embryonic cleavage ; negative regulation of amyloid precursor protein biosynthetic process ; negative regulation of apoptotic process ; negative regulation of apoptotic signaling pathway ; negative regulation of reactive oxygen species metabolic process ; negative regulation of superoxide anion generation ; positive regulation of DNA-templated transcription ; positive regulation of transcription by RNA polymerase II ; regulation of mitotic cell cycle ; regulation of transcription by RNA polymerase II ; ribosomal small subunit biogenesis ; ribosome biogenesis" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MAKGVFERTKPHINVGTIGHVDHGKTTLTAAITKVLAKHVPDDPANKEVAFEQIDNAPEERQRGITIATSHQEYATKNRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLARQVGVPYIVVYLNKADMVDDPELLELVEMEVRELLSEYEFPGDEVPVVVGSALKALEGDEGELGEQSILKLLEALDEYIPEPKRDIDKPFLLAVEDVFSIQGRGTVATGRVEQGKLRLNEEVEIVGIRPTRKTVVTGIEMFNKSMQEAQAGDNIGVLLRGIKRDEIERGQVLAAPGSITPHTRFKAEVYVLSKEEGGRHTPFFSHYRPQFYFRTTDVTGEIFLEEGVEMVMPGDNTVMEVQLISPIAMDEGLNFAIREGGRTVGAGVVTQIIE", - "output": "cytoplasm ; GTP binding ; GTPase activity ; translation elongation factor activity" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MNEFINIFSSSDPENVSSTVKLLLLLTVFSVAPGILILMTCFTRIVIVLSFVRTSLATQSMPPNQVLIGLALFLTFFIMAPTFSEINKEALTPLMDNKISLDEAYTKAEEPIKEFMSKHTRQKDLALFMNYAKMDKPESLKDIPLTTMVPAFAISELKTAFQIGFMIFIPFLIIDMVVASVLMSMGMMMLPPVMISLPFKILLFVLVDGWYLIVKSLLQSF", - "output": "bacterial-type flagellum basal body ; plasma membrane ; bacterial-type flagellum assembly ; bacterial-type flagellum-dependent swarming motility ; protein secretion" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MCGPAMFPAGPPWPRVRVVQVLWALLAVLLASWRLWAIKDFQECTWQVVLNEFKRVGESGVSDSFFEQEPVDTVSSLFHMLVDSPIDPSEKYLGFPYYLKINYSCEEKPSEDLVRMGHLTGLKPLVLVTFQSPVNFYRWKIEQLQIQMEAAPFRSKEPCMAEEVCSMSWYTPMPIKKGSVVMRVDISSNGLGTFIPDKRFQMNINGFLKRDRDNNIQFTVGEELFNLMPQYFVGVSSRPLWHTVDQSPVLILGGIPNEKYVLMTDTSFKDFSLVELSIDSCWVGSFYCPHSGFTATIYDTIATESTLFIRQNQLVYYFTGTYTTLYERNRGSGSWIRVLASECIKKLCPVYFHSNGSEYIMALTTGKHEGYVHFGTIRDGQVSFEMLPRQWSVCEQIGVTTCSIIWSEYIAGEYTLLLLVESGYGNASKRFQVVSYNTASDDLELLYHIPEFIPEARGLEFLMILGTESYTSTAMAPKGIFCNPYNNLIFIWGNFLLQSSNKENFIYLADFPKELSIKYMARSFRGAVAIVTETEEIWYLLEGSYRVYQLFPSKGWQVHISLKLMQQSSLYASNETMLTLFYEDSKLYQLVYLMNNQKGQLVKRLVPVEQLLMYQQHTSHYDLERKGGYLMLSFIDFCPFSVMRLRSLPSPQRYTRQERYRARPPRVLERSGFHNENSLAIYQGLVYYLLWLHSVYDKPYADPVHDPTWRWWANNKQDQDYYFFLASNWRSAGGVSIEMDSYEKIYNLESAYELPERIFLDKGTEYSFAIFLSAQGHSFRTQSELGTAFQLHSQVDVGVVLADPGCIEASVKQEVLINRNSVLFSITLKDKKLCYDQGISGHHLMETSMTVNVVGSSGLCFQETHLGPHMQGNLMVPVFIGCPPGKRLAFDITYTLEYSRLKNKHYFDCVNVNPEMPCFLFRDIFYPFFLIQDLVTGDSGSFQGSYVLLVVGGGPTLDSLKDYSEDEIYRFNSPLDKTNSLIWTTRTTRTTKDSAFHIMSHESPGIEWLCLENAPCYDNVPQGIFAPEFFFKVLVSNRGVDTSTYCNYQLTFLLHIHGLPLSPKRALFIIMVSASVFVGLVIFYIAFCLLWPLVVKGCTMIRWKINNLIASESYYTYASISGISSMPSLRHSRMGSMFSSRMTEDRAEPKEAVERQLMT", - "output": "CatSper complex ; motile cilium ; plasma membrane ; sperm principal piece ; cell differentiation ; spermatogenesis" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MAEKRNIFLVGPMGAGKSTIGRQLAQQLGMEFFDSDSVIEERAGAEISWIFDIEGENGFRKREERIINELTQKQGIVLSTGGGVVLSKENRNHLSARGIVVYLQTTVAKQFERTQRDKKRPLLQGVEDARQVLENLAVIRNPLYEEVADITLPTDEQSAKVMANQIIDLIDNFHG", - "output": "cytoplasm ; ATP binding ; magnesium ion binding ; shikimate kinase activity ; amino acid biosynthetic process ; aromatic amino acid family biosynthetic process ; chorismate biosynthetic process ; phosphorylation" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MSNVLELTIPASTANLGVGFDSIGMALDKFLHLSVKETSGTKWEYIFHDDASKQLPTDETNFIYHVAQQVASKYSVDLPNLCIEMRSDIPLARGLGSSASALVGAIYIANYFGDIQLSKHEVLQLATEIEGHPDNVAPTIYGGLIAGYYNDVSKETSVAHIDIPDVDVIVTIPTYELKTEASRRALPQKLTHSEAVKSSAISNTMICALAQHNYELAGKLMQQDGFHEPYRQHLIAEFDEVKTIAIQHNAYATVISGAGPTILIFSRKENSGELVRSLNSQVVSCHSELVDINISGVKERIVYQ", - "output": "cytoplasm ; ATP binding ; homoserine kinase activity ; phosphorylation ; threonine biosynthetic process" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MEMEHINENTIRVLIGNEDLADRGITFLDLLGNHKDVENFFYSILEEVDVEDEFQGSEAVTFQVLPKNDGLELFISKNVAMDDLSSLEGLSEVNADVSELIRKQIEADKAAADELDEMEATDETNRNVIFELDNFEAMIQLSKEVFMQSVLTNLYTYNDRYYLQVLFLTDELEKTNVDNEIAQILEFAHKTTVTQDTLVEYGTCIMERSALELTRYYFND", - "output": "protein-macromolecule adaptor activity" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MNNWVTTYENHNYGLVISSRIRLARNLAKIPFSHKLNIEESKKVIKNVENAFYTFSNTEEKFKSNYLWDKNDNEKNIYLEKHLISKNLIDNSSKAAFILDDKETISIMINEEDHVRIQCITGGLNLEEVYDVSEKIDDLLEENLEYAFDEKLGYLTACPTNVGTGLRASVMLHLPSLSLNNQINGFLNALAQVGMTIRGLYGEGSKAIGNIYQISNQVTLGRSEEEILSNLKALVLQIINQEIISRENLMKKYKYELEDKIYRALGVLKSAVLLNSSECLKLLSDVRLGVEMGIIKDVNGITLNKLLVESQPATIQKIYGESLSNKDRDFNRAKFVREKLAVNTA", - "output": "ATP binding ; creatine kinase activity ; protein kinase activity ; phosphocreatine biosynthetic process ; phosphorylation" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MTRLAEILDQMSAVLNDLKTVMDQEQQHLSMGQINGSQLQWITEQKSSLLATLDYLEQLRRKEPNTANSVDISQRWQEITVKTQQLRQMNQHNGWLLEGQIERNQQALEMLKPHQEPTLYGANGQTSTTHRGGKKISI", - "output": "cytoplasm ; bacterial-type flagellum assembly" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MVFEGHLVGTELKVGVVVGRFNEFITSKLLGGALDGLKRHGVEEADIDVAWVPGAFEIPLIAKKMANSGKYDAVITLGTVIRGATTHYDYVCNEVAKGVASLSLQTDIPVIFGVLTTETIEQAIERAGTKAGNKGYESAVAAIEMAHLSKQWA", - "output": "riboflavin synthase complex ; 6,7-dimethyl-8-ribityllumazine synthase activity ; riboflavin biosynthetic process" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MNRRLLVRSISCFQPLSRITFGRPNTPFLRKYADTSTAANTNSTILRKQLLSLKPISASDSLFISCTVFNSKGNIISMSEKFPKWSFLTEHSLFPRDLRKIDNSSIDIIPTIMCKPNCIVINLLHIKALIERDKVYVFDTTNPSAAAKLSVLMYDLESKLSSTKNNSQFYEHRALESIFINVMSALETDFKLHSQICIQILNDLENEVNRLKLRHLLIKSKDLTLFYQKTLLIRDLLDELLENDDDLANMYLTVKKSPKDNFSDLEMLIETYYTQCDEYVQQSESLIQDIKSTEEIVNIILDANRNSLMLLELKVTIYTLGFTVASVLPAFYGMNLKNFIEESEWGFTSVAVFSIVSALYITKKNFNSLRSVTKMTMYPNSPANSSVYPKTSASIALTNKLKRRRKWWKSTKQRLGVLLYGSSYTNKANLSNNKINKGFSKVKKFNMENDIKNKQNRDMIWKWLIEDKKN", - "output": "mitochondrial inner membrane ; mitochondrion ; magnesium ion transmembrane transporter activity ; mitochondrial magnesium ion transmembrane transport" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MFGKLLTKVFGSRNDRTLKGLQKVVNKINALEADYEKLTDEQLKAKTAEFRERLAAGASLDSIMAEAFATVREASKRVFEMRHFDVQLLGGMVLDSNRIAEMRTGEGKTLTATLPAYLNALTGKGVHVITVNDYLARRDAENNRPLFEFLGLTVGINVAGLSQQAKKDAYNADITYGTNNEFGFDYLRDNMAFSPQERVQRPLHYALIDEVDSILIDEARTPLIISGAAEDSSELYIKINTLIPNLIRQDKEDSEEYVGEGDYSIDEKAKQVHFTERGQEKVENLLIERGMLAEGDSLYSAANISLLHHVNAALRAHTLFERDVDYIVQDGEVIIVDEHTGRTMPGRRWSEGLHQAVEAKEGVRIQNENQTLASITFQNYFRQYEKLAGMTGTADTEAFEFQHIYGLDTVVVPTNRPMVRKDMADLVYLTANEKYQAIIKDIKDCRERGQPVLVGTVSIEQSELLARLMVKEKIPHQVLNAKFHEKEAEIVAQAGRTGAVTIATNMAGRGTDIVLGGNWNMEIEALENPTAEQKAKIKADWQERHDAVVAAGGLHILGTERHESRRIDNQLRGRAGRQGDAGSSRFYLSMEDSLMRIFASDRVSGMMKKLGMEEGEAIEHPWVSRAIENAQRKVEARNFDIRKQLLEFDDVANDQRQVVYAQRNELMDAESIEDTIKNIQDDVISAVIDQYIPPQSVEELWDVPGLEQRLQQEFMLKLPIQEWLDKEDDLHEETLRERIITSWSDAYKAKEEMVGAPVLRQFEKAVMLQTLDGLWKEHLAAMDHLRQGIHLRGYAQKNPKQEYKRESFELFQQLLSTLKHDVISVLSKVQVQAQSDVEEMEARRREEDAKIQRDYQHAAAEALVGGDDGSDEMMAHTPMIRDGDKVGRNDPCPCGSGRKYKQCHGKLS", - "output": "cytoplasm ; plasma membrane ; ATP binding ; metal ion binding ; protein-exporting ATPase activity ; intracellular protein transmembrane transport ; protein import ; protein targeting" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MAARHHAFILAGTGSGCGKTTVTLGLLRLLQKRALRVQPFKVGPDYLDTGWHTAICGVASRNLDSFMLPPPVLNALFCEQMRQADIAVIEGVMGLYDGYGVDPNYCSTAAMAKQLGCPVILLVDGKAVSTSLAATVMGFQHFDPTLNLAGVIVNRVTSDAHYQLLKNAIEHYCSLPVLGYVPPCDGVALPERHLGLITARESLVNQQSWHDFAATLEQTVDVDALLSLSVLSALPAGMWPERPDNTAGAGLTLALADDEAFNFYYPDNIDLLERAGVNIVRFSPLHDRALPDCQMIWLGGGYPELYAADLAANTVMLKHLRAAHQRGVAIYAECGGLMYLGSTLEDSGGEIHQMANIIPGHSKMGKRLTRFGYCEAQAMQPTLLAAPGEIVRGHEFHYSDFIPETPAVMACRKVRDGRVLQEWTGGWQTGNTFASYLHVHFAQRPEMLQHWLAAARRVL", - "output": "ATP binding ; cobyrinic acid a,c-diamide synthase activity ; cobalamin biosynthetic process ; glutamine metabolic process" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MAELTISANDIQSAIEEYVGSFTSDTSREEVGTVVDAGDGIAHVEGLPSVMTQELLEFPGGVLGVALNLDEHSVGAVILGNSENIEEGQQVKRTGEVLSVPVGDAFLGRVINPLGQPIDGRGDIKAETRRALELQAPSVVQRQSVKEPLQTGIKAIDAMTPIGRGQRQLIIGDRKTGKTAVCVDTILNQRQNWETGDPKKQVRCVYVAVGQKGTTIASVRRALEEGGAMDYTTIVAAPASDSAGFKWLAPYTGSAVAQHWMYDGKHVLIVFDDLTKQAEAYRAISLLLRRPPGREAYPGDVFYLHSRLLERCAKLSDELGGGSLTGLPIIETKANDISAYIPTNVISITDGQCFLETDLFNQGVRPAINVGVSVSRVGGAAQIKAIKEVAGSLRLDLSQYRELEAFAAFASDLDATSKAQLDRGARLVELLKQPQYQPMPVEEQVISIFLGTGGHLDSVPVEDVRRFETELLDHIRASEENLLSTIRDTQKLTEETEEALTKVINHFKKGFASSTGESVVPDEHVEAMDEEDLGKESVKVKKPAPQKKK", - "output": "plasma membrane ; proton-transporting ATP synthase complex, catalytic core F(1) ; ATP binding ; proton-transporting ATP synthase activity, rotational mechanism ; proton-transporting ATPase activity, rotational mechanism" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MDTEGFGELLQQAEQLAAETEGISELPHVERNLQEIQQAGERLRSRTLTRTSQETADVKASVLLGSRGLDISHISQRLESLSAATTFEPLEPVKDTDIQGFLKNEKDNALLSAIEESRKRTFGMAEEYHRESMLVEWEQVKQRILHTLLASGEDALDFTQESEPSYIGDVNPPGRSSLDSIEMAYARQIYIYNEKIVSGHLQPNLVDLCASVAELDDKSISDMWAMVKQMTDVVLTPATDALKSRSSVEVRMDFVKQALGYLEQSYKNYTLVTVFGNLHQAQLGGVPGTYQLVRSFLNIKLPAPSPGLQDGEVEGHPVWALIYYCMRCGDLLAASQVVSRAQHQLGEFKTWFQEYMNSKDRRLSPATENKLRLHYRRALRNNTDPYKRAVYCIIGRCDITDNQSEVADKTEDYLWLKLNQVCFDDDGTSSPQDRLTLSQFQKQLLEDYGESHFTVNQQPFLYFQVLFLTAQFEAAIAFLFRMERLRCHAVHVALVLFELKLLLKSSGQSAQLLSHEPGDPPCMRRLNFVRLLMLYTRKFESTDPREALQYFYFLRDEKDSQGENMFLRCVSELVIESREFDMILGKLENDGSRKPGVIDKFTSDTKPIINKVASVAENKGLFEEAAKLYDLAKNADKVLELMNKLLSPVVPQISAPQSNKERLKNMALSIAERYRAQGISANKFVDSTFYLLLDLITFFDEYHSGHIDRAFDIIDRLKLVPLNQESVEERVAAFRNFSDEIRHNLSEVLLATMNILFTQFKRLKGTSPSSATRPQRVIEDRDSQLRSQARALITFAGMIPYRTSGDTNARLVQMEVLMN", - "output": "centrosome ; nuclear envelope ; nuclear membrane ; nuclear periphery ; nuclear pore ; structural constituent of nuclear pore ; nuclear envelope organization ; nuclear pore complex assembly ; nucleocytoplasmic transport ; poly(A)+ mRNA export from nucleus ; positive regulation of SMAD protein signal transduction ; protein import into nucleus ; SMAD protein signal transduction" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MIKKSAAILAGGKSSRMNYINKAFLKYEENYFIERIIKALEDYEEIIIISNNPEEYTEFGLKVFKDIYPSQGPLSGIHSALNYIKNDYCLVVACDMPFINKEVVNYLGNIKEDYEILIPKFQERLQPLCAIYKKSCKDIMEKELINNSNKLIKTCFKFSMKVVEEFPFIEKIHKKEIKNFYNINTVHEYEDLIRKKEI", - "output": "cytoplasm ; GTP binding ; metal ion binding ; molybdenum cofactor guanylyltransferase activity ; Mo-molybdopterin cofactor biosynthetic process" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MEKMYNVGKIVNTHGLIGEIRVIATTDFPEERFQVGNTVYLFEKNSKKPEKLIIRSHRKHKNFDLLMFEGFTGIHQVERMKEGVLKIKEAQLTDLEENEFYFHEIIGCIVVTTDGKELGEITEILTPGANDVWVVKGSDKKEKLIPYIADVVKEININDKKITIEVMEGLLD", - "output": "cytoplasm ; ribosome ; ribosome binding ; ribosomal small subunit biogenesis ; rRNA processing" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MKNLTGIFSALLVAFNEDGSINEQGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTAEKKEIFRIAKDEAKDQIALIAQVGSVNLQEAVELGKYATELGYDCLSAVTPFYYKFSFAEIKHYYDTIIAETGNNMIVYSIPFLTGVNIGVEQFGELYKNPKILGVKFTAGDFYLLERLKKAYPNHLIWAGFDEMMLPAVALGVDGAIGSTFNVNAPRARQIFELTKQGKLAEALAVQHVTNDLIEGILANGLYLTIKELLKLQGVEAGYCREPMTAKATDKQLEVAKALYAKFL", - "output": "cytoplasm ; N-acetylneuraminate lyase activity ; carbohydrate metabolic process ; N-acetylneuraminate catabolic process" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MSNVPAELKYSKEHEWLRKEADGTYTVGITEHAQELLGDMVFVDLPEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYAGGWIFKIKASDESELESLLDATAYEALLEDE", - "output": "glycine cleavage complex ; glycine decarboxylation via glycine cleavage system" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MNKLALYCRSGFEKELAAEITEKATALGVFGFARVVENSGYVIFECYQIGEADLLARKITFSQLIFARQLIVVSDLISNLSVQDRISPIIEYYRQQEKILNLKQSSDIWVETADTNEAKTLAAFCRKFTVPLRQALRKQGWLQAKNKKSGITLHIFFTQSNSCYIGYSYNNNHAEHIMGIPRLKFPAEAPSRSTLKLEEAILYFIPPNQEATRFNENKYAVDLGACPGGWTYQLVRRGVFVYAVDHGKMATSLHETGRIEHCAEDGFKFRPPKHCKIDWLVCDMVEQPRRIADLISQWLVKGWCKETIFNLKLPMKKRYFEVQQCLRQIEDKLNKQNISFQLQAKHLYHDREEITVYIRLM", - "output": "cytoplasm ; S-adenosylmethionine-dependent methyltransferase activity ; methylation ; rRNA processing" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MSKETFQRNKPHINIGTIGHVDHGKTTLTAAITRTLSGDGLADFRDYSSIDNTPEEKARGITINASHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSATDGAMPQTKEHILLARQVGVPYIVVFLNKIDMISEEDAELVDLVEMELAELLEEKGYKGCPIIRGSALKALEGDAAYIEKVRELMQAVDDNIPTPEREIDKPFLMPIEDVFSISGRGTVVTGRIERGIVKVSDKVQLVGLRDTKETIVTGVEMFRKELPEGRAGENVGLLLRGIGKNDVERGMVVCLPNSVKPHTRFKCAVYVLQKEEGGRHKPFFTGYRPQFFFRTTDVTGVVTLPEGVEMVMPGDNVEFEVQLISPVALEEGMRFAIREGGRTIGAGTISKIIA", - "output": "cytoplasm ; GTP binding ; GTPase activity ; translation elongation factor activity" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MATKPQDANTTSREAITSKADSPPRPTALIFDSGVGGLSVYQEIRQLLPNLHYIYAFDNVAFPYGEKSGEFIVERVLEIVTAVQQSHPLAIVVIACNTASTVSLPALRERFAFPVVGVVPAIKPAVRLTRNGVVGLLATRATVHASYTLDLIARFATDCKIELLGSSELVEAAETKLHGGVVPLEVLKKILHPWLSMREPPDTIVLGCTHFPLLTEELAQVLPEGTRMVDSGAAIARRTAWLISSQENVISSQDENIAYCMALDEDTDALLPVLQSYGFPKLQKLPI", - "output": "glutamate racemase activity ; cell wall organization ; peptidoglycan biosynthetic process ; regulation of cell shape" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MSEDPQPESSALSDLKIASHAPLDDAQRAGRMKCTRCGCSRMFFCYSCGALVGLQPGDVPRVTLPVKIDIIKHPNETDGKSTAVQAKLLAPQDVTIYTYPCIPELDQSAENIVLVFPGPDAMSVEELWEYFCADGRPRVKRVKAEAESLRCPIQRVVFIDSTWNQTSRIITDERLQALPNVELKSRKTCFWRRQKGSPDTYLATIEAIYYFLKDLHCHYFCEYTGEYDNLLFFFSFLHKLINKAKQAAGKA", - "output": "nucleus ; tRNA-uridine aminocarboxypropyltransferase activity ; tRNA modification" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MTELELLGPRASGQPLGTAILKAVAEDFQVDEVLDIPLSGQGEHLWLWVEKRDLNTEEAARRLARAAGVPVRSISYAGLKDRQALTRQWFSLHLPGKADPDLSRAEDATLRVLKQVRHQRKLQRGAHSANGFTLRLTALAADHAALDARLQTLKQQGVPNYFGGQRFGHGGGNVQDAQHWAARKALPEQRNVRSRLLSAARSYLFNQVLAARVADGSWQRAQVGDLLAFTDSRSFFSAGEQECSDPRLAILDLHPTGPMWGEGPSPAAGAALTLETAIGQQHALLCQWLANAGMSHERRILRLPIGGLTWHYPEPDILQLEFVLPAGCFATVVVRELVDLVPAGQTDSPCVF", - "output": "RNA binding ; tRNA pseudouridine synthase activity ; tRNA pseudouridine synthesis" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MTRPIQASLDLQALKQNLSIVRQAAPHARVWSVVKANAYGHGIERIWSALGATDGFALLNLEEAITLRERGWKGPILMLEGFFHAQDLEMYDQHRLTTCVHSNWQLKALQNARLKAPLDIYLKVNSGMNRLGFQPDRVLTVWQQLRAMANVGEMTLMSHFAEAEHPDGISGAMARIEQAAEGLECRRSLSNSAATLWHPEAHFDWVRPGIILYGASPSGQWRDIANTGLRPVMTLSSEIIGVQTLKAGERVGYGGRYTARDEQRIGIVAAGYADGYPRHAPTGTPVLVDGVRTMTVGTVSMDMLAVDLTPCPQAGIGTPVELWGKEIKIDDVAAAAGTVGYELMCALALRVPVVTV", - "output": "alanine racemase activity ; pyridoxal phosphate binding ; alanine metabolic process" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MATYSFRQTTSSVAGGPCGRSLRLGGGSFRAPSIHGGSGGRGVSVSSARFVSSGLGSGLGGGYGGAFSSSFSAGFGGGYGGGLGSGDGLLSGNEKTTMQNLNDRLASYLDKVRALEEANSDLETKIREWYLKQGPGPARDYSPYYKAIEDLRDQILAATIDNSKVVLQIDNARLAADDFKTKFETEQALRMSVEADINGLRRVLDELTLARTDLELQIENLKEELAYLKKNHEEEMSALGGQVASQVSVEVDSAPGIDLSKILADMRDQYEHMAEKNRKDAEAWFHSKTEELNRELAVNTEQLQSSKSEVTDLRRTLQGLEIELQSQLSMKGALESTLADTEGRYGAQLAQIQDMIGSIEAQLAELRADMERQNSEYKMLMDIKTRLEQEIATYRQLLEGQESQLFGSLSGSPDKRDKPADGK", - "output": "intermediate filament ; structural molecule activity ; epithelial cell differentiation ; intermediate filament organization" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MAIFEGSFTTASNLKVGIVVARFNDLITNKILSGCLDCLKRHGLDTSETSETLDIVWVPGSFELPIAAKTLLKKSNYDVLISLGAVIRGETSHYDVVISEASKGIAQVSYDYDVPIIFGVLTTDSMQQALERAGIKNNLGWNYALQAIEMGSLIKNLN", - "output": "riboflavin synthase complex ; 6,7-dimethyl-8-ribityllumazine synthase activity ; riboflavin biosynthetic process" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MPIREIRHPLIRHKLGLMRRADISTKNFRELAQEVGALLTYEATKDLPLESYEIPGWCGPVQVEKIAGKKITVVPILRAGIGMLEGVLSLIPGAKVSAVGVARNEETLQAHTYLEKLVPEIDERLAMIIDPMLATGSSMVATIDLLKKAGCRDIRAMVLVAAPEGIAAVEQAHPDVTIYTASIDQKLNEHGYIIPGLGDAGDKIFGTKQKDS", - "output": "GTP binding ; magnesium ion binding ; uracil phosphoribosyltransferase activity ; UMP salvage ; uracil salvage" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MAKKNYIIGIDAGTTGIRTFCFNDKGKVISSAYQEFKQYYPKPGWVEHDPEEIWVKTQKLITLAIKNGKLNPKDAVAIGITNQRETSVVWDKKTGKPVYNAIVWQCRRTSDICKDLKKQSLDSNFRNKTGLVLDAYFSGTKIQWILDNVKGARDRAERGDLLFGTIDTWLLYKLTGHKEHKTDHTNASRTLLFNIQTKEWDEELCKILRVPMSMLPKAFNSKNLFGFTSNVKSIPDGIPISSLVGDQQGALFGQLCTEPGEAKNTYGTGCFLLFNVGDEFRISNQGLITTLALGPEGKTVYCLEGSVFIGGAVVQFLRDNLEFFKYSKDSEKLVKSIKTKDDIVFVPAFAGLGAPHWDQEARGAIFGLSRDTTPAQITRAALKAIALQSYELANAMEKETGKPLKFLRVDGGATSNAWLMQFQADILGTKVIRPQNVDTTVLGAAYLAGLERGFFKSVAHLRKEETKTTQFTPKMKESERKEEIDKWNLAISRVKTET", - "output": "ATP binding ; glycerol kinase activity ; glycerol catabolic process ; glycerol metabolic process ; glycerol-3-phosphate metabolic process ; phosphorylation" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MSATQDYIVADIGLADFGRKEIAIAETEMPGLMACREEFGASKPLKGARITGSLHMTIQTAVLIETLVALGAEVRWASCNIFSTQDHAAAAIAASGVPVFAVKGETLEEYWTYTDKIFQWADGGVSNMILDDGGDATMYILLGARAEAGENILTNPGSEEEEILFAQIKKRLAATPGWFTRQRDAIKGVTEETTTGVNRLYQLQAKGLLPFPAINVNDSVTKSKFDNKYGCKESLVDGIRRGTDVMMAGKVAVVCGYGDVGKGSAASLSGAGARVKVTEVDPICALQAAMDGYEVVQLEDVVSSADIFITTTGNKDVIRIEHMRAMKDMAIVGNIGHFDNEIQVSALRNLKWTNVKPQVDLIEFPKGNRIILLSEGRLLNLGNATGHPSFVMSASFSNQVLAQIELFTKGEQYKNEVYVLPKQLDEKVARLHLAKLGAKLTELSEEQASYIGVKQQGPFKAEHYRY", - "output": "cytoplasm ; adenosylhomocysteinase activity ; one-carbon metabolic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MARTVHCIKLNKEAEGLDFPPLPGELGKKIWQSVSKEAWAGWLKHQTMLINENRLNMADARARQYLLKQTEKYFFGEGADQAQGYVPPQS", - "output": "iron ion binding" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MIRTLVHAKIHRATVTGADLNYVGSITIDEDLLEAAGIWPFERVQVVDVNNGARLETYAIVGERGSGTIQLNGAAAHLVNVGDLVIIMAYAQVDAKPEEWEPTVVFVNEQNAITEVKALLPVGGR", - "output": "cytoplasm ; aspartate 1-decarboxylase activity ; alanine biosynthetic process ; pantothenate biosynthetic process" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MAAARATTPADGEEPAPEAEALAAARERSSRFLSGLELVKQGAEARVFRGRFQGRAAVIKHRFPKGYRHPALEARLGRRRTVQEARALLRCRRAGISAPVVFFVDYASNCLYMEEIEGSVTVRDYIQSTMETEKTPQGLSNLAKTIGQVLARMHDEDLIHGDLTTSNMLLKPPLEQLNIVLIDFGLSFISALPEDKGVDLYVLEKAFLSTHPNTETVFEAFLKSYSTSSKKARPVLKKLDEVRLRGRKRSMVG", - "output": "cytoplasm ; cytosol ; EKC/KEOPS complex ; nucleoplasm ; nucleus ; ATP binding ; hydrolase activity ; p53 binding ; protein serine kinase activity ; protein serine/threonine kinase activity ; protein phosphorylation ; regulation of signal transduction by p53 class mediator ; tRNA processing ; tRNA threonylcarbamoyladenosine metabolic process" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MAKDVRLGLDAREKMVEGINVLADAVKVTLGPKGRNVVLEKSFGAPTVTKDGVSVAREIELEDKFMNMGAQMVKEVSSQTNDVAGDGTTTATVLAQSIVREGMKSVAAGMNPMDLNRGIHKAVEAVVKEIQKMSVPCTTTESIAQVGTISANSDSAVGKMIAEAMEKVSTEGVITVEEGSSLHDELVVVEGMEFDRGYLSPYFVTNQEKMVAELDNPYILLHDKKISNIRDLLPTLEAVSKAGRPLLIIAEDVDGEALATLVINNMRGIVKATAIKAPGFGERRKAMLQDMAVLTGGTVISEEVGLTLENVTLDMLGETKSAVVGKDSTKLIDGAGAKADIEARCAQIRSQAENTTSEYDSEKLQERLAKLAGGVAVIKLGAATEVEMKEKKDRVDDALHATRAAVQEGIVAGGGVALVRARSKVKVKGDNDEQQLGIEIALRAMEEPMRQIAANCGLEGSVIVNKVMESKDNMGFDAASETYVDMIKAGIIDPAKVTRSALQNAASVAGLVLTTGAAIADLPSKDGASADAAAGGMGGMGGMM", - "output": "cytoplasm ; ATP binding ; ATP-dependent protein folding chaperone ; isomerase activity ; unfolded protein binding ; protein refolding" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MTVLHSIDFFSSSSAPVAIEARAPQSAFPEHHHDFYEIVIVEEGAGVHVFNGNPYTLSRGCVCFVRDHDRHLFESTDDLFLTNVLFRAPDAFRFLSGVGHFLPRECDGVYPSHWRVNGQVLQQIKCLIACLEHAPKSDQVEDIALHESVFMQLLVKLWQGCQTQAGDDQEGRLYQLLDWLQNNYSEAVEWPELADRFALPLRTLHRQLKNKTGMTPQRYLTRLRLLQARHQLCYSDNSVTDIAYLCGFGDSNHFSTLFKREFSQSPRDLRSQL", - "output": "cytoplasm ; DNA-binding transcription factor activity ; sequence-specific DNA binding ; positive regulation of DNA-templated transcription ; rhamnose metabolic process" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNATGAPGRNRGVDLQENNPASRSQCCSN", - "output": "azurophil granule membrane ; early endosome membrane ; endomembrane system ; endosome ; extracellular exosome ; lipid droplet ; lysosomal membrane ; melanosome ; plasma membrane ; G protein activity ; GDP binding ; GTP binding ; GTPase activity ; intracellular protein transport ; plasma membrane to endosome transport" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MTAGSDLDDFRGLLAKAFDERVVAWTAEAEAQERFPRQLIEHLGVCGVFDAKWATDARPDVGKLVELAFALGQLASAGIGVGVSLHDSAIAILRRFGKSDYLRDICDQAIRGAAVLCIGASEESGGSDLQIVETEIRSRDGGFEVRGVKKFVSLSPIADHIMVVARSVDHDPTSRHGNVAVVAVPAAQVSVQTPYRKVGAGPLDTAAVCIDTWVPADALVARAGTGLAAISWGLAHERMSIAGQIAASCQRAIGITLARMMSRRQFGQTLFEHQALRLRMADLQARVDLLRYALHGIAEQGRLELRTAAAVKVTAARLGEEVISECMHIFGGAGYLVDETTLGKWWRDMKLARVGGGTDEVLWELVAAGMTPDHDGYAAVVGASKA", - "output": "cytoplasm ; acyl-CoA dehydrogenase activity ; enoyl- reductase activity ; flavin adenine dinucleotide binding ; catechol-containing siderophore biosynthetic process ; fatty acid beta-oxidation using acyl-CoA dehydrogenase" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MPNVTLIGIDLGKNSFHIHCQEKHGNTLLRKRFSRIQLTQFLATCPPCIVAMESCAGAHFMARHISQLGHQVKLISPQFVRPFVKSNKNDFIDAEAICEATSRPSMHFVTPRTEDQQAMSALHRVRDALVRERVKATNQMHAFLLEFGISMPRGIAVIKRLATVPEEHELPPYLVRLLTRLHQHYGYLCEQIEEIERELKNHLADDETAQRLLTIPGIGTITASLLATKLGDGKNYLSSRDFGASTGLVPRQYSTGGKSTLMGISKRGDKNLRRLLVQCARVYMQRLEYQSGRLAEWVNGQLTRHHSNVVACALANKLARIAWVVTTQGTVFSK", - "output": "DNA binding ; transposase activity ; transposition, DNA-mediated" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MILRRLVLAGSLLLATAFTSAKKADSPIITATRFDHEPINLFYFGDSDVVMLQDIKNGDVYVSRDAGVKWDMVNLDGLKGQALSLWSHPTDRTKAYILGKAGKHWVTNDQAKSWHEFSADVEFFQSLYPLVFHGKDSDRVLLQGQKCFGRDCKEVTYYTTDGFKTVDILMENARGCNWAVSTPIFGDGLNLSKEVNDRIFCIVPGLQSPWSDYNRLLYSDRFFKQDPGTEAPLDSGRAVSGVVRTASVKKYLLAAAKSARTSELALYVTDDGSQWHRAEFDGHRVEEDAYTVLESTNYSIQIDVVAETPSAPMGRLFTSNSNGTYFTRNIDHTNRNSLGFVDFEKIANIQGIILVNTVKNWEDVEMSALVEKKIISQISFDDGRTFQPLKAGKHDLHLHSVTHLSNSGRVFSSPAPGLVMGVGNTGGHLKDYYDGDLYVSDDAGITWRKALDEAHKYEFGDQGSVIVAIFDEGRTGKISYSLNHGKDWKEASLPDGIKIRARILTTMPDSTGLKFLLVGSAKKDSEVEHYVISISFTDMEERTCGKDDFETWPARLNEKNEPDCLMGHKQFYQRRKADVDCFIKKKFQEPVPQFEPCKCTVEDFECDFNFIRSTDGKSCVPARNLPVPEGACKKPDDKYMGSSGFRLIPGNACIREGGVELDKQIERVCTDTLTVPVSGEIAVQKTFFTADNYKGYFYLERKDSSKGDDETVIMITSELQIYITRDHGKIWKEIFPGESITRIVPHQYFDDVAYFLTNSGDGWYTLDRGENFRTFKVPIPPNQDKLPVLSFHPERRDWLIWTGAVECKTRGPQCHSVAYYSTNHGSEWHFLMQYVRRCEFIKREARGSSNNLVFCEQFENENPLNHHLQLLSTDDWFSEKKVHYNNILDFATMQEFIIVAVRGEKPQDSLSVGVSVDGETFAYADLPANVQIPVQRAYTVLESRTHAAFLHVTVNNIEDHEYGSILKSNSNGTSYVLSLSAVNRNTYGYADFEKMQGMEGVAMANVVGNVADVEKGAAKKYRTMITHNDGAEWTLLSPPSKDSEGRDYSCSTKGGKPTDKCALHLHSYTERVDPRDTYSSPAAIGVMLGTGNVGEYLTLKSEADTFITRDGGITWEEVKKDKYQWEFGDSGSIIVIVPESRPTKTLFYSLDEGKSWKEFQFSEVEMLIRDISTVPSDTSRNFLLWGNEVGNGKKPGIATVNVDFSNLKERHKQCVLNEEKPEADDYYLWEPIHPFQPNGCLFGHRAKYHRKRPDRDCFIGRELQHLDSIGDICECTRSDYECDYNYEPQIDGTCAPVPGLQPLDPKLICMEDPKAVEWYEPTGYRRIPLTKCEGGKQLHHIIPHACPNKEEEFLKKHPGLRGVGLFFVVMGPIGLAAAIGYYVYTRWDGKFGRIRLGDTGSGGFFASDSLFISIPVAIVAGVVAVATALPLLASSLWRSVKGYARVPGGSSSQRVYSSRAAFAAQRADYVGVVDDEDELLGAEDFDEEENDDRGQV", - "output": "Golgi apparatus ; membrane ; intracellular transport ; protein transport" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MLRERIKKFHFIGIGGIGMSGIAQILLEMGYKVSGSDISENKNTKLLKQKGAKIYIGHRPENLGDAQVVVYSSAVKPDNPEIQEAKRRNIPVIPRGEMLAELFKLKEGIAVSGSHGKTTTTSMIAEILINAGLEPTVIIGGRLKRLGTNAKLGRGELLVSEADESDGSFLKLQPAVAVITNVDKEHLDFYENFERVKEAFEQFMNSVPFYGFAVVNLDDPTLAQLVKKSHERVITYGINSPALVRAKNLYLKEGRYEFGVEFKGKELGRIHLGIAGIHNVYNALAATGVALELGVSFEVIKKSLEEFRNAERRLELKGYYKNSPVYDDYGHHPTEIKAVINSLRDMYPDKNLLVVFQPHRYSRTYYLFEDFVKVLKDIDKLIVTDIYPASENNVYGVSAEELARKSGAVFAKDKEEVFEKVREVHDEGDVILFLGAGSISKWCEEFLKEVNLEK", - "output": "cytoplasm ; ATP binding ; UDP-N-acetylmuramate-L-alanine ligase activity ; cell cycle ; cell division ; cell wall organization ; peptidoglycan biosynthetic process ; regulation of cell shape" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MSYNLTDPYEIARYIKEAKKSTPIKAYIEGDLSNCDFTNIEKFNSGDLYILFGESEEILVIIEKNKDKIKNCRIEQDRRKSAIPLLDMLKINARIEPGATIRDKVIIGENAVIMMGAVVNIGAEIGEGTMVDMNAVVGARGKLGKNVHLGAGAVVAGVLEPPSSDPCTIEDNVLIGANAVILEGVKIGKGSVVAAGSIVTTDVPENVVVAGAPAKIIKEVDVKTKDKTKLLDDLRK", - "output": "tetrahydrodipicolinate N-acetyltransferase activity ; diaminopimelate biosynthetic process ; lysine biosynthetic process via diaminopimelate" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MDNKIVYVVSDSVGETADLVVRAAMGQFPFAPDIRRVPYVEDTGTLKEVISIAKSNQALICFTLVKPDMRQYLVTEAAKEGVEAYDIIGPLIDQIEEITGQVPRYEPGVVRRLDEEYFKKIEAIEFAVKYDDGRDARGILKADIVLIGISRTSKTPLSQYLAHNKRLKVANVPLVPEVDPPEELYQVAKEKCFGLKITPEKLNHIRKERLKSLGLSDGATYANINRIKEEIDHFENVVSKINCQVIDVSNKAIEETANIIVNAVQNQKMF", - "output": "ADP binding ; ATP binding ; phosphotransferase activity, phosphate group as acceptor ; protein serine/threonine kinase activity ; protein dephosphorylation ; protein phosphorylation" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MSYQGKKNIPRITSDRLLIKGGRIVNDDQSFYADIYMEDGLIKQIGDNLIVPGGVKTIEANGKMVIPGGIDVHTHFQMPYKGMTTVDDFFQGTKAALAGGTTMIIDHVVPEPESSLTEAYEKWREWADGKSCCDYALHVDITHWNDSVKQEVQSLSKEKGVNSFMVYMAYKDLYQVSNTELYEIFTCLGELGAIAQVHAENGDIIAQEQARMLEMGITGPEGHVLSRPEELEAEAVFRAITVASQTNCPLYVTKVMSKSAADLISQARKKGNVVFGEPITASLGIDGTHYWSKNWAKAAAFVTSPPLSPDPTTPDYINSLLASGDLQLSGSAHCTFSTAQKAIGKDNFTAIPEGTNGVEERMSVIWDKAVATGKMDENQFVAVTSTNAAKIFNLYPRKGRIAVGSDSDLVIWDPDALKIVSAKNHQSVAEYNIFEGMELRGAPLVVICQGKIMLEDGNLHVTQGAGRFIPCSPFSDYVYKRIKARRKMADLHAVPRGMYDGPVFDLTTTPKGGTPAGSTRGSPTRPNPPVRNLHQSGFSLSGTQVDEGVRSASKRIVAPPGGRSNITSLS", - "output": "cell body ; cytosol ; exocytic vesicle ; extracellular space ; filamentous actin ; growth cone ; lamellipodium ; synapse ; chondroitin sulfate binding ; filamin binding ; hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides ; identical protein binding ; phosphoprotein binding ; SH3 domain binding ; actin crosslink formation ; actin filament bundle assembly ; cellular response to cytokine stimulus ; negative regulation of cell migration ; negative regulation of neuron projection development ; nervous system development ; positive regulation of filopodium assembly ; positive regulation of neuron projection development ; response to axon injury" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MAQRRAAAESARHQRLLEGKAQAEGGSARTSLLILVSIFTIAAFLMFLVYKNFPQLSEEEGKCIKIPRDMDDAKALGKVLSKYKDTFYVQVLVAYFATYVFLQTFAIPGSIFLSILSGFLYPFPLALFLVCLCSGLGASFCYMLSYLVGRPVVYKYLTEKAVKWSEQVERHREHLINYIIFLRITPFLPNWFINITSPVINVPLKVFFIGTFLGVAPPSFVAIKAGTTLYQLTTAGEAVSWNSLFVLMILAILSILPALFQKKLKQKFE", - "output": "endoplasmic reticulum membrane ; mitochondria-associated endoplasmic reticulum membrane ; phospholipid scramblase activity ; autophagosome assembly ; nervous system development" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MLSRRQLIPIATKSVSPFLRSSITCRRISMGRKELSEKDSNILDSVIRVDQAGELGANQIYKGQHFILQFTDPKVAPTIQHMWDQEKYHLATFDNYVLKNRVRPTFLRPFWDIAGFALGAGTALLGTKAAMACTEAVETVIGGHYNDQLRETAHLENKAPEFKEIRSHLAEFRDDELEHLNTAVEGWNAKEAPAHALLTNAIQMGCKAAIWMCKRF", - "output": "extrinsic component of mitochondrial inner membrane ; mitochondrial inner membrane ; mitochondrion ; 3-demethoxyubiquinol 3-hydroxylase activity ; metal ion binding ; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen ; ubiquinone biosynthetic process" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MSGEGDTTLKAICYKPGSLQLLDQRKLPLETIYLEIRDASDGWSAIQEMVVRGAPAIAIAAALSLAVEVFNFHGFDGSASDAVAFLENKLDYLVSSRPTAVNLADAALKLKHVIAKALATATEAKSIFKAYIEASEDMLEDDVVSNKAIGNFGLSLLRQQAKNPDKLSVLTHCNTGSLATAGYGTALGVIRALHTQGILERAYCTETRPFNQGSRLTAFELVHEKIPATLIADSAAAALMKDGRVDGVIVGADRVASNGDTANKIGTYSLALCAKHHGIPFYVAAPLTSVDLSLSSGKEIVIEERSPKELMHTHGGLGERIAAPGISVWNPAFDMTPAELIAGIITEKGVITKNGNDTFDISSFAKKITGNSSR", - "output": "mitochondrion ; nucleus ; plasmodesma ; S-methyl-5-thioribose-1-phosphate isomerase activity ; L-methionine salvage from methylthioadenosine ; L-methionine salvage from S-adenosylmethionine" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MKIITQNKKAHFEYFIEQKFVAGIKLQGSEVKSIRAGKCSINEAYITFRNGEVFILNMHIAKFDASSIFNHEETRTRKLLLNRSEIDKLMGAQTRDGMTIIPLTVELHEGLIKVVIALAKGKKLFDKRETIKERDIKREQQQSLKGKMR", - "output": "cytoplasm ; RNA binding ; trans-translation" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "VGFKAGVKDYKLTYYTPSYETKDTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYHIEPVAGEETQFIAYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPTAYVKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLPGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIFKSQAETGEIKGHYLNATAGTCEEMMKRAVFARELGVPIVMHDYLTGGFTANTTLAHYCRDNGLLLHIHRAMHAVIDRQKKHGMHFRVLAKALRMSGGDHIHAGTVVGKLEGEREITLGFVDLLRDDFIEKDRSRGLFFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLAREGNDIIREASKWSPELAAACEVWKEIKFEFEAMDTL", - "output": "chloroplast ; magnesium ion binding ; monooxygenase activity ; ribulose-bisphosphate carboxylase activity ; photorespiration ; reductive pentose-phosphate cycle" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MKKMAIACALLSSVVASSVWADAASSLKSRLDKVSSFHATFTQKVTDGSGAAVQEGQGDLWVKRPNLFNWHMTQPDESILVSDGKTLWFYNPFVEQATATWLKDATGNTPFMLIARNQASDWQQYNIKQDGDNFVLTPKASNGNLKQFTINVGRDGTIHQFSAVEQDDQRSAYQLKSQQNGAVDPSKFTFTPPQGVTIDDQRK", - "output": "periplasmic space ; lipoprotein localization to outer membrane ; lipoprotein transport" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MASKLLLEIVTPDRKVLSQEVDYVGAPGIEGEFGIMANHIPFLSALGVGNLYFKEGNRTHYIFVSGGFAEVGNNKVTILAEVAEKAVEIDIARAQKAQEKAKARLAKAQDRIESARAQAALQRALARLTCKDAAQKAGTTTH", - "output": "plasma membrane ; proton-transporting ATP synthase complex, catalytic core F(1) ; ATP binding ; proton-transporting ATP synthase activity, rotational mechanism" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MKLSRRSFMKANAVAAAAAAAGLSVPGVARAVVGQQEAIKWDKAPCRFCGTGCGVLVGTQQGRVVACQGDPDAPVNRGLNCIKGYFLPKIMYGKDRLTQPMLRMKDGSYHKDGEFTPVSWEQAFDVMEEKFKTALKEKGPEAIGMFGSGQWTIWEGYAAAKLFKAGFRSNNIDPNARHCMASAVVGFMRTFGMDEPMGCYDDIEQADAFVLWGSNMAEMHPILWSRITNRRLSDPNVKVAVLSTFQHRSFELADNGIVFTPQSDLVILNYIANYIIQNNAVNQDFFTKHVNLRKGATDIGYGLRPTHPLEKAAKNPGSDASEPMSFDEYKAFVAEYTLDKTAEMTGVPKDQLEQLAQLYADPNKRVISYWTMGFNQHTRGVWANNLVYNLHLLTGKISQPGCGPFSLTGQPSACGTAREVGTFSHRLPADMVVTNEKHRDICEKHWQIPAGTIPAKVGLHAVAQDRALKDGKLNVYWVMCNNNMQAGPNINEDRMPGWRDPRNFIIVSDPYPTVSALSADLILPTAMWVEKEGAYGNAERRTQFWRQQIKAPGEAKSDLWQLVQFSRRFKTEEVWPEALLAQKPELRGKTLYDVLFATPAVSKFPLSELKEDQLNDESRELGFYLQKGLFEEYAWFGRGHGHDLAPFDDYHNARGLRWPVVEGKETQWRYSEGNDPYVKAGEGYKFYGKPDGKAVIFALPFEPAAESPDNEYDLWLSTGRVLEHWHTGSMTRRVPELHRAFPEAVVFIHPLDAKARDLRRGDKVKVSSRRGEVISIVETRGRNRPPQGLVYMPFFDAAQLVNNLTLDATDPLSKETDFKKCAVKLAKV", - "output": "periplasmic space ; 4 iron, 4 sulfur cluster binding ; electron transfer activity ; iron ion binding ; molybdenum ion binding ; molybdopterin cofactor binding ; nitrate reductase (cytochrome) activity ; nitrate reductase activity ; Mo-molybdopterin cofactor biosynthetic process ; nitrate assimilation" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MSATYAPDRILLEKAETLSEALPYIQRYAGKIFVVKYGGHAMGNPDAAQDFAEDIVLLKAIGIHPVVVHGGGPQIGKMLKALGVESQFIDGLRVTDNETAKIAEMVLSGAINKDIVSWIGRAGGRAVGISGKDAKLVEVEKVKKIRKNSTDGQDENIDLGFVGRPVSVDRRLIDTLTQSGMIPVVAPIGVGADGETYNINADTMAGALAAGLEAARLFLLTDVAGVLDADKKLLRTLTPSQIDSLTKADVISGGMIPKLETCIESVKSGVDAAVILDGRVPHSILIELFTEQGAGTLVKLD", - "output": "cytoplasm ; acetylglutamate kinase activity ; ATP binding ; arginine biosynthetic process via ornithine ; phosphorylation" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MSTLLEKTRKVNRILQKTGIQPVDFNEMASILKDVIEANVYILSRKGKVLGYSILKDYGNDIFAQSKIIPEEYNDKLLRVTETLANDKGNLFKEDKILSDLILTIVPVNGGGDRLGTLVLSRGVKEFTDDDLILAEYGATVVGLEILRSKNEEIEDEARKRAVVQMALGTLSYSELEAIKNIFEELNGKEGLLVASKIADKVGITRSVIVNALRKFESAGIIESRSLGMKGTHIRVLNDKLLEELEKMKR", - "output": "cytoplasm ; DNA binding ; DNA-binding transcription factor activity ; GTP binding ; negative regulation of DNA-templated transcription" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MAFMGRELKWGVAHIYSSLNNTIIHITDLTGAETVSRWSGGMVVKADREKPSPYAAMIAASRAAAEAMDKGITALHIKVRAPGGHGPKTPGPGAQAAIRALARAGFIIGRIEDVTPIPHDTTRRPGGRRGRRV", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MSDDVALPLQFTDAAANKVKSLIADEDNPNLKLRVYITGGGCSGFQYGFTFDDQVNEGDMTIEKQGVGLVVDPMSLQYLVGGSVDYTEGLEGSRFIVTNPNAKSTCGCGSSFSI", - "output": "2 iron, 2 sulfur cluster binding ; iron ion binding ; iron-sulfur cluster assembly" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MTTSVRTRFAPSPTGFIHLGNIRSALYPWAFARKMKGTFVLRIEDTDVERSTSESVDAILEGMAWLGLDFDEGPFYQMQRMDRYREVLKQMQDAGLVYPCYMSTEELDALRERQREAGEKPRYDGTWRPEPGKVLPEPPAGVQPVLRFRNPLTGVVAWDDAVKGRIEISNEELDDLVIARPDGTPTYNFCVVVDDLDMRITHVIRGDDHVNNTPRQINILRALGGEPPVYAHLPTVLNEQGEKMSKRHGAMSVVGYRDAGFLPEAVVNYLARLGWSHGDAEIFSREQFVEWFDLEHLGKSPAQYDHDKLAWLNAHYIKEADNARLAELAKPFFAELGIDEAALAQGADLAAVVGLLKDRASTVKEIAENAAMFYRTPAPDAESLAQHVTDVVRPALADLAAALKTVEWTKEAIAAALKATLGAHKLKMPQLAMPVRLLVAGTTHTPSIDSVLMLFGRDVVVGRIEKALV", - "output": "cytoplasm ; ATP binding ; glutamate-tRNA ligase activity ; tRNA binding ; zinc ion binding ; glutamyl-tRNA aminoacylation" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MTTILQINSAARSQGAQSTLLANELTAKLQQSNPGAKVVVRDLLADALPHLDESVLGAFFTPADKRTAEQNAIVAKSDALIAELQAADVIVIGAPMYNFGISSQLKTYFDWIARAGVTFRYTENGPEGLIKGKKVHVVTARGGKYAGTPNDSQTPYLRTFLGFVGMTDVNFIFAEGLNLGPDAQSAALAGAREAIAAA", - "output": "electron transfer activity ; FMN binding ; oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor ; oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MKIKTGARILALSALTTMMFSASALAKIEEGKLVIWINGDKGYNGLAEVGKKFEKDTGIKVSVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGAYAQSGLLAEITPDKAFQDKLYPFTWDAVRYNGKLIAYPVAVEALSLIYNKDLVPNPPKTWEEIPALDKALKAKGKSALMFNLQEPYFTWPLIAADGGYAFKFENGKYDVKNVGVDSAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDKSKVNYGVTLLPTFKGKPSKPFVGVLSAGINAASPNKELAKEFLENYLMTDPGLEAVNNDKPLGAVAVKSFQEKLEKDPRIAATMANAQKGEIMPNIPQMSAFWYAVRTAVINAASARQTVDAALKDAQGRITK", - "output": "outer membrane-bounded periplasmic space ; carbohydrate transmembrane transporter activity" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MAGNTIGQLFRVTTFGESHGLALGCIVDGVPPGIPLTEADLQHDLDRRRPGTSRYTTQRREPDQVKILSGVFEGVTTGTSIGLLIENTDQRSQDYSAIKDVFRPGHADYTYEQKYGLRDYRGGGRSSARETAMRVAAGAIAKKYLAEKFGIEIRGCLTQMGDIPLEIKDWSQVEQNPFFCPDPDKIDALDELMRALKKEGDSIGAKVTVVASGVPAGLGEPVFDRLDADIAHALMSINAVKGVEIGDGFDVVALRGSQNRDEITKDGFQSNHAGGILGGISSGQQIIAHMALKPTSSITVPGRTINRFGEEVEMITKGRHDPCVGIRAVPIAEAMLAIVLMDHLLRQRAQNADVKTHIPRW", - "output": "chorismate synthase activity ; amino acid biosynthetic process ; aromatic amino acid family biosynthetic process ; chorismate biosynthetic process" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MISYPFFSLSPPGLVPPPMAVPPVEMYSGSFWNRMRKPLPLRTQVIRFTVVFVIVSFILAVALQITHERMPDPKVTKPLPDLGFELLTKVPGMYVLADCCIGFLNILSVFTAFKLYLLHRHCVGSGEPELPCNIPGVSRFFLSVWLCKENCRIELRNIHTIAWIRFITSYALLLLFRSAVIVMTSLPAPDDLCQDPPKIENPVKNVILTVLTAGGGSIHCGDLMYSGHTVILTLHLMFHWIYGAMVHWSFRPVVTVVAIFGYYCIVASRFHYTDDVLVAIYLTIATFIAVGHNADGAPWQLQLFIRWWPCCGANSREVTEDSQPVMVAFKSEELDEMNGVLEGRQKKHGGVGDGESLMFKCGAYV", - "output": "Golgi membrane ; kinase activity ; sphingomyelin synthase activity ; phosphorylation ; sphingolipid metabolic process" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MEELQGYLEKDGSRQQHFLYPLLFQEYIYALAHNHGLNGSIFYEPVEVFGYDNKSSLVLVKRLITRIYQQNFLISLVNDSNQNRFVGYNHNNFFFSHFHSQMISESFAIIVEIPFSLRLVSYFEEKEIPKYHNLRSIHSIFTFLEDKLSHLNYVSDILIPHPIHMEILVQILQCWIQDVPFLHLLRFFLHEYHNLNSLLITQKKSIYVFSKENKRLFRFLYNSYVFEWEFLFVFIRKQSSYLRLTSSGTFLGRTHFYEKIEHLQIKHFVVVCRNYFHRTLWFCKDPFMHYVRYQGKAILASKGTHLLMKKWKYHFFNFWQYYFHVWTQPYRIHINQLSNYSFYFLGYLSSLLLNFSAVRNQMLENSFLIDTITKKFDTXVPVIFLIGSLAKAKFCTVSGHPISEPIWTDLSDSDILDRFGRICRNLSHYHSGSSKKQGLYRIKYILRLSCARTLARKHKSTVRTFLRRLGSGLLEEFFTEEEQVLSLIFPKTTPFILHGSHRERIWYLDIIRINDLVNHS", - "output": "chloroplast ; RNA binding ; mRNA processing ; RNA splicing ; tRNA processing" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MKIGIINTKIRTVFSAFACMIAASLVCTMPARAVVEININKGVIEPLPIAITDFLSADQLGSNITSVIAADLERSGLFAPIDKGAFIEKISNPDAAPRFEDWKVINAQALVTGRITKQPDGRLKAEFRLWDTFGGQQMIGQQFFTTPDNWRRVAHIIADAIYERLTGDKGYFDTRVVFVDESGPAQKRVKRLAIMDQDGANVRFISDGRALSLTPRFSPNRQEVTYMSFEGGSPKVYLLQLETGQRELVGNFPGMTIAPRFSPDGQKVVMSLLQDDGSANIYTMDLRNRTTTRLTSSQAIDTGASYSPDGSQIVFTSDRGGRPQLYVMGADGSNPRRISMGDGSYSTPVWSPRGDLIAFTKQSQGQFSIGVMKTDGSGERLLTSGFHNEGPTWAPNGRVLMFFRKAAGAGGPKLFTIDLTGRNERQIQTPNFASDPAWSPLLE", - "output": "periplasmic space ; cell cycle ; cell division ; protein import" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MAKTSMKAREAKRAQLVAKYAEKRLALKAIISSPATSEEDRWDAVLKLQALPRDSSAARQRNRCNQTGRPHGFLRKFGLSRIKLREATMRGEVPGLRKASW", - "output": "cytoplasm ; ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MSETHLSTQRFADLPLHPEVKQALAENGFEFCTPIQALSLPVLLQSKDIAGQAQTGTGKTMAFLVATFNHLLSTPVPEGRLINQPRAIIMAPTRELAIQIAKDAILLAKHTHLKVGIVYGGESYDVQRKVLDQGVDILIGTTGRIIDYVRQGIIGLNSIQAVVLDEADRMFDLGFIKDIRFLFRRMPEANQRLNMLFSATLSMKVQELAYDHMNEPVKVEIAPEEKTSKNIKEEIFYPSQEEKMRLLLTLIEEDWPEKAIVFSNTKHSCETLWSWLEGDGHRVGLLTGDVPQKKRIRILEQFTSGQLDILVATDVAARGLHISDVSHVYNYDLPDDCEDYVHRIGRTGRAGNKGMSISFACEEYALNLPAIESYINHSIPVSNYDSEALLADIPTPAKIHRKHPSGTRNLRDRSGTSRPGAQRSGARPPRHDRTRRHS", - "output": "cytoplasm ; ATP binding ; ATP hydrolysis activity ; RNA binding ; RNA helicase activity ; RNA catabolic process" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MEDFVRQCFNPMIVELAERAMKEYGEDLKIETNKFAAICTHLEVCFMYSDFHFINEQGESIIVELDDPNALLKHRFEIIEGRDRTMAWTVVNSICNTTGAEKPKFLPDLYDYKENRFIEIGVTRREVHIYYLEKANKIKSEKTHIHIFSFTGEEMATKADYTLDEESRARIKTRLFTIRQEMASRGLWDSFRQSERGEETIEERFEITGTMRRLADQSLPPNFSCLENFRAYVDGFEPNGYIEGKLSQMSKEVNAKIEPFLKTTPRPIRLPDGPPCSQRSKFLLMDALKLSIEDPSHEGEGIPLYDAIKCMRTFFGWKEPYVVKPHEKGINPNYLLSWKQVLAELQDIENEEKIPRTKNMKKTSQLKWALGENMAPEKVDFDDCRNISDLKQYDSDEPELRSLSSWIQNEFNKACELTNSIWIELDEIGEDVAPIEHIASMRRNYFTAEVSHCRATEYIMKGVYINTALLNASCAAMDDFQLIPMISKCRTKEGRRKTNLYGFIIKGRSHLRNDTDVVNFVSMEFSLTDPRLEPHKWEKYCVLEIGDMLLRSAIGQVSRPMFLYVRTNGTSKIKMKWGMEMRPCLLQSLQQIESMIEAESSVKEKDMTKEFFENKSETWPIGESPKGVEEGSIGKVCRTLLAKSVFNSLYASPQLEGFSAESRKLLLVVQALRDNLEPGTFDLGGLYEAIEECLINDPWVLLNASWFNSFLTHALR", - "output": "host cell cytoplasm ; host cell nucleus ; endonuclease activity ; metal ion binding ; RNA binding ; cap snatching ; DNA-templated transcription ; suppression by virus of host mRNA transcription via inhibition of RNA polymerase II activity ; viral RNA genome replication" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MANPIRKLVDNSKKQLKKLNHIADKVEDYADEMAALSDEALQAKTPVFKEKIADALRDVTETDKQNKVLAKTLDALLPEAFAVAREAAKRVLGLYPFRVQIMGAAVLNDGNLAEMRTGEGKTLTATMAVYLNALTDRGVHVVTVNDYLSARDAEQMGQLYNWLGLSVGVNVGDAPAEEKRAAYDADITYSTNFNIGFDYLRDNMVRRAEERVMQRGLNFALIDEADSILIDTARTPLIISGPGSGVSQLYGRADRFVKTLQQDEDYKIDEEAKTTMLTNDGIHKGEIFFNLDNLYDAGDTALTHHIDQALRANFNYINDKDYVVQDGEVKLIDQSTGRISEGTRLSDGLHQAIEAKEGVEIQEENKSMAQITYQNLFRMYKKLSGMTGTAKTEEEELREIYNMEVITIPTNRPIKRVDYPDLLYPSIRAKYNAVVKLIQELHEKGQPILIGTGSVESSELLSKILMAQNVPHNVLNAKNNAKEAEIIANAGQRGAVTVATNMAGRGTDIKLGPGVADLGGLAVIATERHESRRIDNQLRGRAGRQGDDGFSQFFLSLEDDLMIRFGAERIRAVWERMNLDEEETVIKNRLITRSVESAQKRVEGNNYDTRKNVLQYDDVVREQRELIYHQRDIIIDESQSLDWVLMPMVSRTINRVVTVQTKSKKPSEWQLQQIIVFAENVLVNEGALTENDLSGLSREDIEAKLYALAKENYANKKRQLYEPEQMLEFEKVVILRAVDQHWTDHIDALDRLRQGVGLRGYGQLNPLIEYQNEAFENFNKMIADVEYDATRTFMKAEIRQNLKA", - "output": "cytoplasm ; plasma membrane ; ATP binding ; protein-exporting ATPase activity ; intracellular protein transmembrane transport ; protein import ; protein targeting" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MSQGKIVQIIGAVVDVEFQRNEVPKVYHALKVEGTAITLEVQQQLGDGVVRTIALGSTDGLKRNLLATNTERAISVPVGAGTLGRIMDVLGRPIDEAGDVQASDHWEIHRAAPSYEDQSSSTELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDASGKGKDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKSGSITSIQAVYVPADDLTDPSPATTFAHLDSTVTLSRNIASLGIYPAVDPLDSTSRQMDPLVIGHEHYDTAQRVQQTLQKYKELKDIIAILGMDELSEEDKQSVSRARKIERFFSQPFHVAEVFTGSPGKYVSLKDTIRGFKAICDGEYDHLPEQAFYMVGSIEEAVEKANKMSAKA", - "output": "plasma membrane ; proton-transporting ATP synthase complex, catalytic core F(1) ; ATP binding ; proton-transporting ATP synthase activity, rotational mechanism ; proton-transporting ATPase activity, rotational mechanism" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MINFSSFYQQIADSNLQHWLETLPAILGKWQREHKHGNLPKWEKVLNKLHYPSPDSVDLVDSVTIGTGEQLTPGEKEKLENLLRLFMPWRKGPFHIHGIHIDTEWRSDWKWDRVKPHISPLQNRTVLDVGCGSGYHMWRMLGAGAKRVVGIDPSPLFLCQFEAVKRLSGENHPVHLLPLGIEELPPLDAFDTVFSMGVLYHRRSPIDHLLQLRDQLRMGGELVLETLVIDGDENAVLVPQDRYGKMNNVWFIPSVAALMLWLKKCDFTDIRCVDTDVTALAEQRRTDWMPNESLVEYLDPKDITKTVEGYPAPKRATIIAVKNQPNQDLS", - "output": "methyltransferase activity ; transferase activity, transferring alkyl or aryl (other than methyl) groups ; tRNA wobble uridine modification" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MTQETLKSDIKALLKERNAVLLAHNYMRDEVQEIADITGDSLALSIEAAKTDADVIVFCGVHFMAESASILAPEKTVLLPRLDAGCPMADMVSVEALREMKAKLPGVPVVTYVNSSAAVKAESDICCTSANAVKVVQSMSEKEIIFAPDRNLGSYIARFTDKKFHLWEGYCPTHERLRPEVVKELKQANPDAPFVCHPECNPKVVELADHVCSTTGMYDYCKKSGAKRFIIGTEAGILWRLKRESPDKEFILASPALICPNMKLTSLEDVFEALQQMTPVVKVTEEIRIPAKRALDRMLAIPRD", - "output": "cytoplasm ; 4 iron, 4 sulfur cluster binding ; metal ion binding ; quinolinate synthetase A activity ; NAD biosynthetic process" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MFAITGGGTGGHLAIAKALAQEAQKNNQQSIYIGSQIGQDKTWFEGSSLFTHCYFLDSTGVVNKKGLGKIKAIFKQLKAAWEARNILKKHKIEYVISVGGFSAGGASIGAILSNTPLFIHEQNAIKGKLNEILTPFAKAIFGSFEGKSKNFIHTSYPVRDEFFTHSRVREKLHHLLFLGGSQGAKGINDFALQIVPELLKRGITIAHQCGERDFERIKKAYEHIGILDKVDVFAFDKEIVLRLQKADLCIARSGASSLWEMSANGLIGIFVPYPYAAKDHQYYNALHFTKQGLGLLLRESQLDMLRVFTFIESLQKQEDSLSEKSHLLMSKIQPNGAKEILEHITSLMSH", - "output": "plasma membrane ; UDP-N-acetyl-D-glucosamine:N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol 4-beta-N-acetylglucosaminlytransferase activity ; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity ; carbohydrate metabolic process ; cell cycle ; cell division ; cell wall organization ; lipid glycosylation ; peptidoglycan biosynthetic process ; regulation of cell shape" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MKFGKDFRSHLEETLPAWRDKYLAYKSLKKLIKNLPPDGDPPPVAAAAEVPAGDGDGDGGIALGNWFARVLDMELQKLNDFYIEREEWYVIRLQVLKERIERVKAKKNGAFTSKSEFTEEMLEIRKAFVIIHGEMILLQTYSSLNFAGLVKILKKYDKRTGGLLSLPFTQRARHQPFFTTEPLTRLVRECEANLELLFPIEAEVLESASSSAKLQPQNDDAASHDPASSVDVETSDVYRSTLAAMKAIQGLRKASSTYNPLSLARFFHGEDGEACSGAITSESDSYSDSQIEDAEDDDKEVQSREQNTAQNAAEGQPRDE", - "output": "cytoplasm ; nucleus ; cellular response to cold ; cellular response to phosphate starvation" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MHLITQKALKDAAEKYPQHKTELVALGNTIAKGYFKKPESLKAVFPSLDNFKYLDKHYVFNVGGNELRVVAMVFFESQKCYIREVMTHKEYDFFTAVHRTKGKK", - "output": "toxin-antitoxin complex ; endonuclease activity ; RNA binding ; nucleic acid phosphodiester bond hydrolysis" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MSKSTAEIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKERLWVTVYESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNKSLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGNMLGAKETFFYKLVGPLIDVMGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANFSFAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNLPIETNIMDLEAAKAKGAMALFGEKYDERVRVLSMGDFSTELCGGTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAITTVHADSDRLSEVAHLLKGDSNNLADKVRSVLERTRQLEKELQQLKEQAAAQESANLSSKAIDVNGVKLLVSELSGVEPKMLRTMVDDLKNQLGSTIIVLATVAEGKVSLIAGVSKDVTDRVKAGELIGMVAQQVGGKGGGRPDMAQAGGTDAAALPAALASVKGWVSAKLQ", - "output": "cytoplasm ; alanine-tRNA ligase activity ; ATP binding ; tRNA binding ; zinc ion binding ; alanyl-tRNA aminoacylation" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MAAKIRQNDEVIVLTGKDKGKRGKVTKVLPNGKVFVEGINIITKHEKPVPALGKAGGLVKKEAAIDASNVAIFNPKTNKADRVGFRFEDGKKVRFFKSNNEII", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MVKVTDIVLWDKPGEKVLLLGNQAIVRGALEGNIGVYAAYPGTPSSEITDTMAMVAKKAGVYMEYSTNEKVAFETALSASWAGLRAMTAMKHVGLNVAMDSFMTVSYMGINGGLIVVVADDPSMWSSQNEQDTRAIAKFANIPVLEPSSVQEAKDMVKYAFEISEKYGQMVILRTTTRSSHMRGDVVLGELPQEIKEGKRKFGNFKKNPEKYVDIPAFQRPKHPWLLETIEKFREEFNTSPFNWIEGPEDAKVGIIAPGLSYAYVKEALAWLGIDNVKILKLGTPFPVPYGLLEKFFNGLERVLIVEELEPVVEEQVKVWAFDNNINIEIHGKDLVPRVYEMTTRRAVEAVAKFLGVETPINFQEIDEKYKKVQEMVPPRPPSLCPACPHRNTFFAIRKAATPRAIFPSDIGCYTLGVLPPLKTVDTTIAMGGSIGVAHGLSIALNGALGEEQRKTGKEKKIIVATIGDSTFFHTGLPALANAIYNRSNVLIVVMDNMVTAMTGDQPNPGTGETPHGPGKRILIEEVARAMGADFVAVVDPYDIKETYETIKKALEVEGVSVVVSRRACALYRIGQLRREGKQWPIYQVNEEKCTGCKICINAYGCPAIYWDAEKKKARVDPLMCWGCGGCAQVCPFGAFEKVREGEL", - "output": "4 iron, 4 sulfur cluster binding ; indolepyruvate ferredoxin oxidoreductase activity ; metal ion binding ; thiamine pyrophosphate binding ; organic acid metabolic process ; organic substance biosynthetic process ; sulfur compound biosynthetic process" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MRVDGREVRELRHVHIHTNYLKHPEGSVLIEVGDTKVICSATVEERVPPFMRGEGKGWVTAEYAMIPRATEQRTIRESSKGKVTGRTMEIQRLIGRALRAVVDLEVLGERTVWIDCDVIQADGGTRTASITGAYVAMVLAFEKLLQAEKVTKIPVKDYLAATSVGILEEQGVVLDLNYAEDSKADVDMNVIMTGKGHFVEVQGTGEEATFSRAQLNELLDAAEHGILQLIEKQKEALGDIVSHIE", - "output": "3'-5'-RNA exonuclease activity ; phosphate-dependent exonuclease activity ; tRNA binding ; rRNA catabolic process ; rRNA processing ; tRNA processing" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MTTSPVKVLIHGASGRMGKALLRLAAEDDALHVVGAVVGRSPSQRVVDGVPYFAANELGGAPAFDVAIDFSLPQGFAPILALCVQRGKPLVSGTTGLDEAQRAGLLQAAGQIPLVWASNFSLGVAVLTELVERAAGSLPGWDCDIIEAHHVHKQDAPSGTALTLGEAATGSGAQPRFASVRAGDIVGEHSVQFTGLGERVELIHRATNRDIFARGALHAAKRLLGKPPGSYRVRDLVL", - "output": "cytosol ; 4-hydroxy-tetrahydrodipicolinate reductase ; NAD binding ; NADP binding ; oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor ; diaminopimelate biosynthetic process ; lysine biosynthetic process via diaminopimelate" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MSNSRMNGVEKLSSKSTRRVANAGKATLLALGKAFPSQVVPQENLVEGFLRDTKCDDAFIKEKLEHLCKTTTVKTRYTVLTREILAKYPELTTEGSPTIKQRLEIANEAVVEMALEASLGCIKEWGRPVEDITHIVYVSSSEIRLPGGDLYLSAKLGLRNDVNRVMLYFLGCYGGVTGLRVAKDIAENNPGSRVLLTTSETTILGFRPPNKARPYDLVGAALFGDGAAAVIIGADPRECEAPFMELHYAVQQFLPGTQNVIEGRLTEEGINFKLGRDLPQKIEENIEEFCKKLMGKAGDESMEFNDMFWAVHPGGPAILNRLETKLKLEKEKLESSRRALVDYGNVSSNTILYVMEYMRDELKKKGDAAQEWGLGLAFGPGITFEGLLIRSLTSS", - "output": "endoplasmic reticulum ; acyltransferase activity, transferring groups other than amino-acyl groups ; tetraketide alpha-pyrone synthase activity ; flavonoid biosynthetic process ; pollen exine formation ; polyketide biosynthetic process ; sporopollenin biosynthetic process" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MNPLKAGDIAPKFSLPDQDGEQVNLTDFQGQRVLVYFYPKAMTPGCTVQACGLRDNMDELKKAGVDVLGISTDKPEKLSRFAEKELLNFTLLSDEDHQVCEQFGVWGEKSFMGKTYDGIHRISFLIDADGKIEHVFDDFKTSNHHDVVLNWLKEHA", - "output": "thioredoxin-dependent peroxiredoxin activity" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MKLAVIAGDGIGPEVIGEALRVLDAVVPGVEKTEYDLGARLYHRTGEVLPDSVLDELKGHDAILLGAIGDPSMPSGVLERGLLLRIRFELDHHINLRPGRLYPGVQSPLAGNPEIDFVVVREGTEGPYTGNGGAIRVGTPHEIATEVSVNTAYGVRRVVQDAFKRAQQRRKHLTLVHKNNVLTNAGSLWWRTVQAVAAEYPEVEVAYQHVDAATIHMVTDPGRFDVIVTDNLFGDIITDLAAAVCGGIGLAASGNIDATLTNPSMFEPVHGSAPDIAGQGIADPTAAIMSVSLLLAHMAEIDAAARVDKAVAEHLATRGDEKLSTTQVGDRILGKL", - "output": "cytoplasm ; 3-isopropylmalate dehydrogenase activity ; magnesium ion binding ; NAD binding ; leucine biosynthetic process" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MSDILNVSQQREAITKAAAYISAILEPHFKNTTNFEPPRTLIICGSGLGGISTKLSRDNPPPVTVPYQDIPGFKKSTVPGHSGTLMFGSMNGSPVVLMNGRLHGYEGNTLFETTFPIRVLNHMGHVRNLIVTNAAGGINAKYQACDLMCIYDHLNIPGLAGQHPLRGPNLDEDGPRFLALSDAYDLELRKLLFKKWKELKIQRPLHEGTYTFVSGPTFETRAESKMIRMLGGDAVGMSTVPEVIVARHCGWRVLALSLITNTCVVDSPASALDESPVPLEKGKATHAEVLENGKIASNDVQNLIAAVMGEL", - "output": "cytoplasm ; inosine nucleosidase activity ; nicotinamide riboside hydrolase activity ; purine-nucleoside phosphorylase activity ; guanosine catabolic process ; inosine catabolic process ; NAD biosynthesis via nicotinamide riboside salvage pathway ; nicotinate nucleotide salvage" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MVSTISRQDQNNNDDLNQPSKEGRFGKYGGQYVPETLMPALFELEEAASDAWKDKQFVNELNHLLKTYVGRETPLYEAKRLTEHYQTKTSTSRIWLKREDLNHTGAHKINNALGQALLAIRMGKQRIIAETGAGQHGVATATVCARFGLQCIIYMGAEDIKRQSLNVFRMKLLGAEVKVVTSGTATLKDATSEAIRDWVSNVETTHYILGSVAGPHPFPMIVRDFHAVIGEEAKKQCLESFGSLPDILLACVGGGSNAMGLFHPFVKEKSVRLIGVEAAGSGVNTEKHAATITKGSVGILHGSMSLLLQDKDGQVQEAHSISAGLDYPGVGPEHSYLKDIGRAEYGSVTDAEALDALKLVSELEGIIPALETAHAFAWLEKLCPTLDKDTEIVINCSGRGDKDVNTVASSLNID", - "output": "tryptophan synthase activity" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MARTTSQLYDAVPIQSSVVLCSCPSPSMVRSQTEPGSSPGIPSGVSRQGSTMDGTTAEARPSTNPLQQHPAQLPPQPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYHFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFETITWENLHQQTPPKLTAYLPAMSEDDEDCYGNYDNLLSQFGFMQVSSSSSSHSLSTVETSLPQRSGSNIEQYIHDLDTNSFELDLQFSEDEKRLLLEKQAGGNPWHQFVENNLILKMGPVDKRKGLFARRRQLLLTEGPHLYYVDPVNKVLKGEIPWSQELRPEAKNFKTFFVHTPNRTYYLMDPSGNAHKWCRKIQEVWRQQYQSNPDAAVQ", - "output": "cell projection ; cytoplasm ; cytoplasmic vesicle ; cytosol ; focal adhesion ; nucleus ; perikaryon ; plasma membrane ; postsynaptic density ; 3-phosphoinositide-dependent protein kinase activity ; ATP binding ; insulin receptor binding ; kinase activator activity ; phospholipase activator activity ; phospholipase binding ; protein kinase activator activity ; protein kinase binding ; protein serine kinase activity ; protein serine/threonine kinase activity ; activation of protein kinase B activity ; calcium-mediated signaling ; cell migration ; cellular response to epidermal growth factor stimulus ; epidermal growth factor receptor signaling pathway ; extrinsic apoptotic signaling pathway ; focal adhesion assembly ; hyperosmotic response ; insulin receptor signaling pathway ; insulin-like growth factor receptor signaling pathway ; intracellular signal transduction ; negative regulation of cardiac muscle cell apoptotic process ; negative regulation of endothelial cell apoptotic process ; negative regulation of neuron apoptotic process ; negative regulation of protein kinase activity ; negative regulation of toll-like receptor signaling pathway ; negative regulation of transforming growth factor beta receptor signaling pathway ; peptidyl-serine phosphorylation ; peptidyl-threonine phosphorylation ; positive regulation of blood vessel endothelial cell migration ; positive regulation of phospholipase activity ; positive regulation of protein localization to plasma membrane ; positive regulation of release of sequestered calcium ion into cytosol ; positive regulation of sprouting angiogenesis ; positive regulation of vascular endothelial cell proliferation ; regulation of endothelial cell migration ; regulation of I-kappaB kinase/NF-kappaB signaling ; regulation of mast cell degranulation ; signal transduction ; type B pancreatic cell development" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MVSTATQIAGFNFDNCLMNAAGVYCMSKEELLEIETSAAGSFVTKTGTLEAREGNPEPRYAPTPLGSINSMGLPNMGYDYYLDVVLDLEKEENSKNHFISVVGLSPEDTHTILKTLHSSAYQGLVELNLSCPNVPGKPQIAYDFETTEQLLTEIFSYYTKPLGVKLPPYFDIVHFDQAAAIFNKFPLAFVNSVNSIGNGLVIDDETVIIKPKNGFGGIGGDYIKPTALANVHAFYQRLNPSIQIIGTGGVKSGRDAFEHILCGASMVQIGTALQEEGPEIFTRITEELKQIMVEKGYQRLDDFRGKLHYLD", - "output": "cytoplasm ; dihydroorotate dehydrogenase (fumarate) activity ; 'de novo' pyrimidine nucleobase biosynthetic process ; 'de novo' UMP biosynthetic process" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MTFLSTSAFSPLAFSLGLLLVVATAFPTPGPLGGDATSNRLPLTSADKMEELIKYILGKISALKKEMCDNYNKCEDSKEALAENNLNLPKLAEKDGCFQSGFNQETCLTRITTGLQEFQIYLKFLQDKYEGDEENAKSVYTSTNVLLQMLKRKGKNQDEVTIPVPTVEVGLQAKLQSQEEWLRHTTIHLTLRRLEDFLQFSLRAVRIM", - "output": "extracellular space ; cytokine activity ; growth factor activity ; interleukin-6 receptor binding ; acute-phase response ; glucose homeostasis ; hepatocyte proliferation ; interleukin-6-mediated signaling pathway ; liver regeneration ; positive regulation of cell population proliferation ; positive regulation of receptor signaling pathway via STAT ; regulation of glucagon secretion ; regulation of insulin secretion ; response to activity ; T-helper 17 cell lineage commitment ; vascular endothelial growth factor production" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MSAPDSHAPLSRPAVAKSWRGRLELGFERHGARTTLAHRLHDGPLRVQRPLYPEGDAICHAVIVHPPGGVAGGDRLDIDIALGDGTHAVLTTPGATKWYKSNGLDATQRIGIAVGPHAKLDWLPQNNLFFDAAHAALDFTVTLGEGASAIGWDATQIGRQAAGETWAAGRIASTSALVAADGRPLWTERALLDARDPLRGALQGLAGFPAYGTPWAAGAACDAALAEALAARMPFDDTLRAAATCVTPGVVLVRAISTSMEALQRHFTDCWLRLRPIVHDVDARPLRLWQT", - "output": "cytoplasm ; nickel cation binding ; nitrogen compound metabolic process" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MLPHGLIVSCQALADEPLHSSFIMSKMALAAYEGGAVGIRANTKEDILAIKETVDLPVIGIVKRDYDHSDVFITATSKEVDELIESQCEVIALDATLQQRPKETLDELVSYIRTHAPNVEIMADIATVEEAKNAARLGFDYIGTTLHGYTSYTQGQLLYQNDFQFLKDVLQSVDAKVIAEGNVITPDMYKRVMDLGVHCSVVGGAITRPKEITKRFVQVMED", - "output": "N-acylglucosamine-6-phosphate 2-epimerase activity ; N-acylmannosamine-6-phosphate 2-epimerase activity ; carbohydrate metabolic process ; N-acetylmannosamine metabolic process ; N-acetylneuraminate catabolic process" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MKILVGNDDGIFAPGVRALANTLAPDHEVTVVCPDRERSATGHGLTIHQPIRAEQVQSMFVDQVTAWACSGTPADCIKLALGALLDSPPDFVLSGINQGPNLGTDVLYSGTVSAAMEGVIEGITSIAFSYSSFTDQQFQPAANFGQQLLEHLIQHPLSEPMLLNVNVPAVPADQIQGVALTRQGIRRYHDLFEKRIDPRGKTYYWLAGEVMEDLEDDRMADPFVLTDVQAIRQRCIAITPLQYNLTANNSLNPLLAWLTPLQKRQSVI", - "output": "cytoplasm ; metal ion binding ; nucleotide binding ; XMP 5'-nucleosidase activity" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MESPRGRPGPETDLLALGEQQAAIFGDGPGQTPSERPSDLRLSEDEEAENVGGASCHPKASLKTSSCSFVHPPEWEAPEDKPGRGGTFSGAGSRLGAPDPEFDLHGSSRRKDPEPPEAKPESERVCRRGSPVGGGMDVEQKEDDNEAAEAGRGGRSFSSRLQDSRSLDGLSGACGGPASSGGAESGAGGGRRATISSPLELEGTVSRHGDLTHFVANNLQLKIRLSGAPQPPPPAPTRPCSAPTPTPAIPPIDPDVLRDLERLSRELGGRVDRLLRGLGGAVQELTALSVGCIQTYRDAVDSLGEAVDMSIKGMYTLLARCEELERALQPVQGLARQVRDIRRTLEVLEALCK", - "output": "BORC complex ; lysosomal membrane ; lysosome localization" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MDHLPIFCQLRDRDCLIVGGGDVAERKARLLLDAGARLTVNALAFIPQFTAWADAGMLTLVEGPFDESLLDTCWLAIAATDDDALNQRVSEAAEARRIFCNVVDAPKAASFIMPSIIDRSPLMVAVSSGGTSPVLARLLREKLESLLPLHLGQVAKYAGQLRGRVKQQFATMSERRRFWEKLFVNDRLAQSLANNDQKAITETTEQLINEPLDHRGEVVLVGAGPGDAGLLTLKGLQQIQQADVVVYDRLVSDDIMNLVRRDADRVFVGKRAGYHCVPQEEINQILLREAQKGKRVVRLKGGDPFIFGRGGEELETLCNAGIPFSVVPGITAASGCSAYSGIPLTHRDYAQSVRLITGHLKTGGELDWENLAAEKQTLVFYMGLNQAATIQQKLIEHGMPGEMPVAIVENGTAVTQRVIDGTLTQLGELAQQMNSPSLIIIGRVVGLRDKLNWFSNH", - "output": "NAD binding ; precorrin-2 dehydrogenase activity ; sirohydrochlorin ferrochelatase activity ; uroporphyrin-III C-methyltransferase activity ; cobalamin biosynthetic process ; methylation ; siroheme biosynthetic process" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MFSSESVTEGHPDKICDQISDAIVDALLTADPLSRVAAEVVVNTGMVILTGEITSQAHVNFTRLVRDKVAEIGYTDAKNGFSAESCAVLVAFDEQSPDIAQGVNLALESRTSQEDEFDLIGAGDQGLMFGFACDETPELMPLPISLAHRLSRQLAAVRKNGTLPYLRPDGKTQVTVAYEEGRPVGIHTLLISTQHTPTIGAITEEAAVQERIRADLWEAVVQPVFAELPIKPDGNTRFLTNPTGKFVIGGPQGDAGLTGRKIIVDTYGGYSRHGGGAFSGKDPTKVDRSAAYAARYVAKNIVAAGLAQKCEVQVSYAIGVARPINLLVETFGTGRIPDEALLRLVQRHFDLRPAAILAQFQLRELPRQRGGRFYQNVAVYGHFGQTHLDLPWERTDKAALLREEAFAGATAILG", - "output": "cytoplasm ; ATP binding ; magnesium ion binding ; methionine adenosyltransferase activity ; one-carbon metabolic process ; S-adenosylmethionine biosynthetic process" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MSKLDLNALNELPKVDRVLALAETNAQLETLTAEERVAWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNEINKVEPMNRALKELKAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG", - "output": "cytoplasm ; phosphoadenylyl-sulfate reductase (thioredoxin) activity ; hydrogen sulfide biosynthetic process ; sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MVTQLTKNAIDSLINSTNPDEQYVIQVLKAPQSVAENLFKICISDGFCKFKKGYFVSDAATKCQDLKDLCIIKCKKYIDDSNHDKERIIISNYELIYSNIQEQIGKPIEYKQYKSSGFSNPEGSTVIPSQYLSRNAQILQQNQVSQPKQMVTPPVSNINKPTPAVNNTFAQKPAVTNQNIQRVNQNPQQMNKTAPVKQNNNNNNNNNGNNKNNSSLQISTDGDEQNLEYIRNLQPNGQPQTIKVRITKKGDLKSFKEKQGKLFSIDVIDKFGDECSISFFNEIAEQYDGLFKVGQVIVLKQFSVKVNNNHQYNKGDHTVTVNKESKILICQEDPSIPMIKLNRQFIQDMQNKQKGDLIDLIVVVKADTEVKTMILKKDNQQQSKRDIISFDESLIETEITLWGETAKDYDAKQGDIIVFKDAKIGEFKDKKQINIGYGTQIFMNPDEQLFPQIHDVKKWYLSLNSDQLSTIQKAQGNDTGPREVTSFESSLNILKEEIKNLQTDPEMKIWKEIRGQIMYIKDTPLYYNACFSCKKKIARNNEVWTCINCNKDFNEPDSRYILSLNISDSTDTIWVSAFDEVGQKILGVKGDVFRYADEDTEHGTETKKKLLMAAQNKEYRFLLLTKQERDQNGNARDKTVIHAIKDFQPAYEAKKIINSLEKFMVIEENNP", - "output": "DNA replication factor A complex ; DNA binding ; metal ion binding" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MFTGSIVALVTPMDEKGNVSRSCLKKLIDYHVANGTSAIVSVGTTGESATLSHDEHGDVVMMTLELADGRIPVIAGTGANATAEAISLTQRFNDSGIVGCLTVTPYYNRPTQEGLFQHFKAIAEHTDLPQILYNVPSRTGCDMLPETVGRLAEIKNIIAIKEATGNLTRVHQIKELVSDDFILLSGDDASALDFMQLGGHGVISVTANVAARDMADMCKLAAEGQFAEARAINQRLMPLHNKLFVEPNPIPVKWACKALGLVATDTLRLPMTPITDHGRDIVKAALQHAGLL", - "output": "cytoplasm ; 4-hydroxy-tetrahydrodipicolinate synthase activity ; diaminopimelate biosynthetic process ; lysine biosynthetic process via diaminopimelate" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MIESKNQSFFPNRFDCVVVGAGHAGSEAAYIASKGGAKTLLITMNLDTIGQMSCNPAIGGIAKGHMVREVDALGGIMGKVIDNTGIQFKMLNTSKGPSVWAPRAQAEKKEYQLKVKHTLEAEKNLSMRQDTVEELLIENDQVIGVKTGRGFEIYTNHVILTTGTFLSSLVHIGTYQNENGRMCEPTVKGLSKSLAKYNLKLGRLKTGTPPRIHKNSVDLSVLAIQDGDANPSPFSFSTEKITRRQIPCYITYTNVETHKLIHENLSLSPMYSGQIQSTGPRYCPSIEDKVVRFADRERHQVFLEPEGYETTEIYLNGVSTSLPEEVQWKLVRSLKGLENAEIVRPGYAIEYDYVDPTELKPTLETKKIKGLYHAGQINGTTGYEEAAAQGLVAAYSVLHSLKNLDPLLFKRSESYIGVLIDDLVYKGVEDPYRMFTSRAEHRLLLRQDNADQRLMKYGYELGLVDQESYDRMKDKYERVNSVREKIYQIPLKPSDEFQNLLDQKGITNYKFGMKLDSFLKRPEIKIEDVEFMLPEVSSWSESEKNILEMEIKYEGYIKRELETIQWKNKYLDLAIPEDINYESIAGLKKEAIQKLKTHKPMTLEKAGQISGVDPSDVDLLLYHIKGKRKQEAEAS", - "output": "cytoplasm ; flavin adenine dinucleotide binding ; tRNA wobble uridine modification" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MLIEHERGFVLHVRAWRETSLLVEVLTEQHGRVGLLARGVHGPRKQALRAALQPLQLIQFSAVQRGELAQLRQAEALDTAPRLVGDTMLAGFYISELLLRLAPRNDPVPELYACYTQARTHLAADLPLAWGLRRFERDVLEGLGFAFDLQHDSDGQPIDPAARYRLDPEEGALRVLSERLAQDRRETVTGAALLALGEDVMPAAEDMPGLRRSMRSVLLHHLGGRGLKSWEMLEDLARRR", - "output": "DNA recombination ; DNA repair" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MNIDNELSKCRNIGIMAHIDAGKTTTTERILFYTGKQNRIGEVHEGAASMDWMEQEKERGITITSAATTCFWNGHRINIIDTPGHVDFTIEVERSLRVLDGAVAVFDGVAGVEPQSETVWRQADKYNVPRICFMNKMDRMGADFYRCVDMLVDRLGATPLVLQLPIGSEKDFVGVVDLLEMRSIIWDEDSLGASFHYGEIPKDMIDKAQEYRNKLLESAVELNDEAMNLYFEGKEISVSLLKSCIRTGVIQSKFVPVLCGSAFKNRGVQPLLDAVVDFLPAPNDIPVIEALDVKTSNTINVKTSAGGKFVALAFKVMTDKFVGSLTFIRIYSGKLSSKTTVLNAVKDSTESIGRILLMHANNREDITEAQAGDIVALAGLKKTVTGDTLCALDYPVILERMEFPEPVMEIAVEPKSTADQEKMGIALSRLVAEDPSLGMYVNPESGQTILKGMGELHLEVIVDRMRREFNVEANIGAPQVAYRETITKSVEIEYIHKKQTGGAGQFAKVNILFEPLPPGSGFQFESKITGGAIPKEYIPGVQSGLENIRGSGMLAGFPVIDFKATLFDGAFHEVDSSPLAFELAAKGAFRDMVNKAGAILLEPIMKVEIITPDEYMGDVIGDINSRRGRVAEMQDRHNTKVILAFIPLAKMFGYVKDLRSMSQGRAQYSMYFSCYEQVPDNIVANEIKTK", - "output": "cytoplasm ; GTP binding ; GTPase activity ; guanosine tetraphosphate binding ; translation elongation factor activity" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MFQSSIYNKNYKKFLKNLKYQGEYAVTLGILAISILLLTGFNQFLNTKPTLKKNYFLNQKSIKNTLKNWNDIIATTANKYKVDEKLIKSIVYVESSGNPYAKSQSNAIGLMQIKPSSAGAEVYRLNGKKGRPSIQELYDPKTNIDIGTSYISFLQKKFISIKNKDVMRYAIIVAYVNGTSALLKTFSKSRKEAINIINTMTKKSFCTHIKKNTRQCKHFVI", - "output": "membrane ; lytic transglycosylase activity ; cell wall organization ; peptidoglycan metabolic process" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MDSSTVLFIGAVAVAFIFLKWMVSPIPPQNEFTIDHLSQDQSTGSTTSSNAHQNRDTHSISTQSHRNSRRAVSESMIEVVQSIAPMLTVEQIRYDLETTGNVEATVNRFMELGDLPFPPGYVRPQQPPTPSEEPKKQEVIGKRSVNLLEKYNIDAKNPKSDHNSLLHQRRQEMILGARKRLAAQLSNEL", - "output": "endoplasmic reticulum membrane ; ubiquitin binding" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MAILKDTIIRYANARYATASGTSTATAASVSAASCPNLPLLLQKRRAIASAKSKNPNLVKRELQAHHSAISEYNNDQLDHYFRLSHTERPLYNLTNFNSQPQVNPKMRFLIFDFIMYCHTRLNLSTSTLFLTFTILDKYSSRFIIKSYNYQLLSLTALWISSKFWDSKNRMATLKVLQNLCCNQYSIKQFTTMEMHLFKSLDWSICQSATFDSYIDIFLFQSTSPLSPGVVLSAPLEAFIQQKLALLNNAAGTAINKSSSSQGPSLNINEIKLGAIMLCELASFNLELSFKYDRSLIALGAINLIKLSLNYYNSNLWENINLALEENCQDLDIKLSEISNTLLDIAMDQNSFPSSFKSKYLNSNKTSLAKSLLDALQNYCIQLKLEEFYRSQELETMYNTIFAQSFDSDSLTCVYSNATTPKSATVSSAATDYFSDHTHLRRLTKDSISPPFAFTPTSSSSSPSPFNSPYKTSSSMTTPDSASHHSHSGSFSSTQNSFKRSLSIPQNSSIFWPSPLTPTTPSLMSNRKLLQNLSVRSKRLFPVRPMATAHPCSAPTQLKKRSTSSVDCDFNDSSNLKKTR", - "output": "cyclin-dependent protein kinase holoenzyme complex ; cytoplasm ; nucleus ; spindle pole body ; cyclin-dependent protein serine/threonine kinase regulator activity ; cell division ; mitotic cell cycle phase transition ; regulation of cell cycle G1/S phase transition ; regulation of cyclin-dependent protein serine/threonine kinase activity ; regulation of transcription involved in G1/S transition of mitotic cell cycle ; traversing start control point of mitotic cell cycle ; vacuole fusion, non-autophagic ; vacuole organization" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MAEEEVAKLEKHLMLLRQEYVKLQKKLAETEKRCALLAAQANKESSSESFISRLLAIVADLYEQEQYSDLKIKVGDRHISAHKFVLAARSDSWSLANLSSTKELDLSDANPEVTMTMLRWIYTDELEFREDDVFLTELMKLANRFQLQLLRERCEKGVMSLVNVRNCIRFYQTAEELNASTLMNYCAEIIASHWDDLRKEDFSSMSAQLLYKMIKSKTEYPLHKAIKVEREDVVFLYLIEMDSQLPGKLNEADHNGDLALDLALSRRLESIATTLVSHKADVDMVDKSGWSLLHKGIQRGDLFAATFLIKNGAFVNAATLGAQETPLHLVALYSSKKHSADVMSEMAQIAEALLQAGANPNMQDSKGRTPLHVSIMAGNEYVFSQLLQCKQLDLELKDHEGSTALWLAVQHITVSSDQSVNPFEDVPVVNGTSFDENSFAARLIQRGSHTDAPDTATGNCLLQRAAGAGNEAAALFLATNGAHVNHRNKWGETPLHTACRHGLANLTAELLQQGANPNLQTEEALPLPKEAASLTSLADSVHLQTPLHMAIAYNHPDVVSVILEQKANALHATNNLQIIPDFSLKDSRDQTVLGLALWTGMHTIAAQLLGSGAAINDTMSDGQTLLHMAIQRQDSKSALFLLEHQADINVRTQDGETALQLAIRNQLPLVVDAICTRGADMSVPDEKGNPPLWLALANNLEDIASTLVRHGCDATCWGPGPGGCLQTLLHRAIDENNEPTACFLIRSGCDVNSPRQPGANGEGEEEARDGQTPLHLAASWGLEETVQCLLEFGANVNAQDAEGRTPIHVAISSQHGVIIQLLVSHPDIHLNVRDRQGLTPFACAMTFKNNKSAEAILKRESGAAEQVDNKGRNFLHVAVQNSDIESVLFLISVHANVNSRVQDASKLTPLHLAVQAGSEIIVRNLLLAGAKVNELTKHRQTALHLAAQQDLPTICSVLLENGVDFAAVDENGNNALHLAVMHGRLNNIRVLLTECTVDAEAFNLRGQSPLHILGQYGKENAAAIFDLFLECMPGYPLDKPDADGSTVLLLAYMKGNANLCRAIVRSGARLGVNNNQGVNIFNYQVATKQLLFRLLDMLSKEPPWCDGSYCYECTARFGVTTRKHHCRHCGRLLCHKCSTKEIPIIKFDLNKPVRVCNICFDVLTLGGVS", - "output": "cytosol ; early endosome ; endosome ; endosome membrane ; extracellular exosome ; intracellular membrane-bounded organelle ; lysosomal membrane ; macropinosome ; membrane ; metal ion binding ; phosphatidylinositol phosphate binding ; small GTPase binding ; endocytosis ; endosomal transport ; endosomal vesicle fusion ; Golgi to lysosome transport ; positive regulation of pinocytosis ; retrograde transport, endosome to Golgi" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MSFLSGFFGPICEIEVVLNDAETRKVSEIKTEEGKVEKHFLFYDGESVAGKVNIVFKQPGKRLEHHGIRIEFVGQIELFNDKSNTHEFVNLVKELALPGELTQSRNYDFEFMQVEKPYESYIGSNVRLRYFLKVTIVRRLTDLVKEYDLIVHQLATYPDVNNSIKMEVGIEDCLHIEFEYNKSKYHLKDVIVGKIYFLLVRIKIQHMELQLIKKEITGIGPSTTTETETVAKYEIMDGAPVKGESIPIRLFIAGYDPTPTMRDVNKKFSVRYFLNLVLVDEEDRRYFKQQEIVLWRKAPEKIKKRTNFHQRFEPQEPQASAEEPEI", - "output": "early endosome ; endosome ; endosome membrane ; vesicle ; intracellular protein transport" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MIGKLTGTLLEKNPPEVLVDCHGVGYEVQVPMSTFYNLPAVGERVQLLTQFIVREDAQLLYGFGSAPERQAFRELIKISGVGPRTALSILSGMGVDDLAQAVSLQEAGRLVKVPGIGKKTAERLLLELKGKLGVDIGARPEAANDAQADILQALLALGYNDKEGTAALKALPKDVGVSEGIKLALKALAK", - "output": "cytoplasm ; Holliday junction helicase complex ; ATP binding ; DNA binding ; four-way junction helicase activity ; DNA recombination ; DNA repair ; SOS response" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MAPRIERHTGPEEDREEEIHSHQSPSVSGDDDGVEISERPPKRRRLSDSESSEDDPFVPQQPLPTLSRIKKKSDLSAAKGPDRNADQPDPVTAKDAFAMGLQSMDSSFSSLGLAPWLVGSLSAMAIRRPTAIQRACIPEILKGRDCIGGSRTGSGKTVAFAAPILHRWSEDPFGIFAVVLTPTRELALQIFEQFKAISAPQSLKPVLITGGSEMRPQAIALSTRPHVVIATPGRLADHIKTSGQDTIYGLNRVRMVVLDEADRLLASGPGSMLPDVETCLSALPPSTSRQTLLFTATVTQEVRALKSMPRPKDRLPIFVTEISTENNTTIPPTLKQCYLQVPMTHREAFLHVLLSTDANSSKPAIIFCNRTKTADLLDRLLRRLGHRVTSLHSLLPQSERTSNLARFRASAARLLVATDVAARGLDIPSVGLVVNFDVPRNPDDYIHRVGRTARAGREGEAITLVGQRDVQLVLAIEERVGRQMVAWEEEGVSIEGRIVRGGLLKDVGGAKREALGEIEEGRDVLGRRVRKLKKTR", - "output": "nucleolus ; ATP binding ; ATP hydrolysis activity ; RNA binding ; RNA helicase activity ; rRNA processing" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MLLFLVCFVCNIWSVFGVQAASNVSDVVNTIVVASRTQRDISMLVPIGQTNNMGVSLNTVLFEKVGYNSSSLDYIRQLLDGGLQTWMLDLYYNNATSNWQLCPAPFPQNSSTNAYETRTVRWNNRDYHCQPSFTLDSVMQEFRSYFMSTNTNIAVNLIQIMFNLYDFDFSESKNKTIASKELKNYATFSNYGNSTLNSSLSSVSDMLYTPQDLTTYQKTQSGTGISAFYNTSAFDFPSSQTFLLNDYKRLITYVAENKVPKSALGSNDENTIFFNEDFADISYTSDESLLERCGSRTLSDFNQLSLNSNFRTVVDNENVPFTPSSFRKYVTCGYSPILNASRYSIPNKPATTDISDILTYYFPRSYWSWAPGQPHDRQHTANTSSFDKRDYKSSDNQMARKCVTLQESGFVLSNCYEEHKFACQKFNSPNEWKISVSSDTYFSDDYGDCPEGYSFNVPQSSIEVDSLRQEVANSGEKYPIWVDLNDITVANCFVTGGPYAQCPYQRTVSGRRLVELIAPSFVVASVIVVLIFIEKIFRVNPVQTNRKRYWRRAINEYNKQHGYEGVPS", - "output": "membrane" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MRRKIIAANWKMYKTCAETESFIKEFKELSKGYEEKEIVICPPFTSLYVANKLLEDTPIKLGAQNMFWEKEGAYTGEISPIMLKDLNCSYVIIGHSERRQYFSETNDMINKKLKSAFEYELIPIFCVGEKWEEREKGKTEEVITEQVKKGLQGLEKEKVEKIVIAYEPVWAIGTGHSAKGEDANEVAKLIRRIISEIYDEEVSQKVRIQYGGSVNPQNIKEFLAQSEIDGALVGGASLKPQSFWDIVRS", - "output": "cytosol ; triose-phosphate isomerase activity ; gluconeogenesis ; glyceraldehyde-3-phosphate biosynthetic process ; glycerol catabolic process ; glycolytic process" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MAKELTFEQQARAKLLEGINKLAKAVKITAGPKGRNALIEKKYGAPLIVNDGVTIAREIELKDPVENMGAKLIAEAAISTNDIAGDGTTTATILTHEIVNKAIEAINNGTNPVNLRIGIENAAKLVSEYLTSVSKPIKSIDEITQVGAISSGSKFIGELIAKAMDIVGPSGVISIDDAKSFDTTLDTTDGLEFKGGYSSPYMVTDSEKMLSELANPKILVSLNKINTVKEILPLLEASVESSAPLLIVASDIAEDVVTALAINKLRGTLNVVSVKCAEFGEAQKNTLEDLAISVNTILVDSAAGIEFKDLELNKLGSAEKVIISKDKTTVINGACHKDVLAKYLNNLKAKSANLTSKYDKERITKRIANLSNGVAVIHVGGATEVAQKELKLRIEDALNSTKAAVEEGIVAGGGIALMNAIEVLKQVKESNPEIALGYEIVRSSLTAPARQIIENAGQNSSKIINNIINSKQLGYGYNAETNEFVNMINNGIIDPTKVTKTALEKACSVAALLITTEVAINDELKEEKPSLNHL", - "output": "cytoplasm ; ATP binding ; ATP-dependent protein folding chaperone ; isomerase activity ; protein refolding" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MGGISVWQLLIIAVIVVLLFGTKKLRGIGGDLGSAVKGFKKAMSDEDSAKNEKDADFEPKSLEKQQQKEAAPETKKDKEQA", - "output": "TAT protein transport complex ; protein transmembrane transporter activity ; protein transport by the Tat complex" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MASSIICQEHCQISGQAKIDILLVGDVTVGYLADTVQKLFANIAEVTITISDTKEAAALLDDCIFNMVLLKVPSSLSAEELEAIKLIRFGKKKNTHSLFVFIIPENFKGCISGHGMDIALTEPLTMEKMSNVVKYWTTCPSNTVKTENATGPEELGLPLQRSYSEHLGYFPTDLFACSESLRNGNGLELNASLSEFEKNKKISLLHSSKEKLRRERIKYCCEQLRTLLPYVKGRKNDAASVLEATVDYVKYIREKISPAVMAQITEALQSNMRFCKKQQTPIELSLPGTVMAQRENSVMSTYSPERGLQFLTNTCWNGCSTPDAESSLDEAVRVPSSSASENAIGDPYKTHISSAALSLNSLHTVRYYSKVTPSYDATAVTNQNISIHLPSAMPPVSKLLPRHCTSGLGQTCTTHPNCLQQFWAY", - "output": "chromatin ; cytoplasm ; nucleus ; DNA-binding transcription factor activity, RNA polymerase II-specific ; protein heterodimerization activity ; protein homodimerization activity ; RNA polymerase II cis-regulatory region sequence-specific DNA binding ; sequence-specific double-stranded DNA binding ; cell differentiation ; oocyte differentiation ; regulation of transcription by RNA polymerase II ; spermatogenesis" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MTSLTLALDAMGGDHGPHVTVPAALRALKSHSSLKIILVGDKTEIDVYLRQAEQPLLSRIEVIHTDEVVSMSDRPVHALRTRKNSSMRLSIELVRDGRAAACVSAGNTGALMAMAKVLLKTLPGVDRPALVSCLPSVTQKPVYLLDLGANISCDSETLFQFAVMGSVLCEAVDKKSRPKVALLNVGTEEIKGNDQVQQAAQILQNTDQINYTGFIEGDEIYLGNVDVIVCDGFVGNITLKTSEGIAKLLVHQLKRGLTQGFFVRFLAKLIAPRIQAVLSQMNPDHYNGASLIGLRGIVVKSHGNADETAYLQAISLAVTEAQRRLPEMIKDRLESILLDINN", - "output": "cytoplasm ; phosphate:acyl- acyltransferase activity ; fatty acid biosynthetic process ; phospholipid biosynthetic process" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MEIETRPHISGDEKEEEQPLSPAARLFHAPEFNCNIISVIGFKSKLDPCVFIRGFKESFIRHPRFSSKLVTDENGQNQRWVRTNVVVEDHFIVPKIKPQNIENSNAFLEDYVSDLMKIPLDTSRPLWELHLLDLKTSDAENVAVLKIHHSVGDGMSIMSLVLACMRKTSNPDELPSLPYQYRSSSRSSLLTTGSRSDSRLLWLVKVIWTAVILGLNTVCDALEFIVTTLFVKDTETPIKGDFLSTKSKQLRLVHRTVSLDDIKLTKNAMNMTINDVVLGVTQAGLSRYLARRYGEEETKNRKQKKLPKRIRLRSALLVNLRPTTGIQDLADMMEKGSKCRWGNWFGYVVFPFSIALRDDPLEHLEIAQKTISRKKNSYGAMLTYIFCRIIVKLLGIKVAASIINRMVSNTTMTFSNMVGPVEEVSFYGHPITYFASSAYGHPHALTIHCQSYMNKMTITLIVDPTVISDPHRLCDDWEESLRSIKAAVTKRESLRLWDYLRILHNRVAWLLYQIAGLLYRML", - "output": "endoplasmic reticulum membrane ; plasma membrane ; arachidoyl-CoA:1-dodecanol O-acyltransferase activity ; diacylglycerol O-acyltransferase activity ; long-chain-alcohol O-fatty-acyltransferase activity ; response to abscisic acid ; response to salt stress ; response to water deprivation ; triglyceride biosynthetic process" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MTASPKQRIVVGLSGGVDSAVTAHLLKQQGHEVVGIFMKNWEDDDDSEYCSSNVDFVDAAAVADVIGIEIEHVNFAAEYKDRVFAEFLREYEAGRTPNPDVLCNAEIKFKAFLDHAMRVGAEKIATGHYARVRHNPATGLHELLKGLDPAKDQSYFLHRLNQSQLSRTLFPVGELRKTEVRRIAEEIGLPNAKKKDSTGICFIGERPFREFLNRYIQHAPGPILDDRGRRLGQHVGLSFYTLGQRQGLGIGGVKDKGAQRGGGEHAPWFVARKEVERNVLRVVQGHDHPWLLSHTLQATDANWVAGRPPAAGACAAKTRYRQQDAACTVTQAEGGDFALSFPEAQWAVTPGQSAVLYDGEVCLGGGVITAAGPVNSAA", - "output": "cytoplasm ; ATP binding ; sulfurtransferase activity ; tRNA binding ; tRNA modification" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MIEQADEESVFRNRNLVEPDTIIDRDRIVGRDDQLRTVVSNLRKVLNENRPPNLLLYGPAGTGKSLIFDAVARQIRDISKNRGYEFGTLRINCQNLRSLDEAVYALVREAAHDLNEEIGVARHGVSTSTKYDRLYDLLDEGYDSVVFVLDEIDLLLGRRSSSSEPAYSDLIYQLSRASIESIDIQVSVAALTNDPEFMNNLDARAESSFNPRDIPFSDYDANQLQEILRNREDAFIQDALSEDVIPLTSAFAAQSHGDARKAIDLLRKAGDVANENGDLTVTENHVREAQEDVETDRSLKLVEGLTTQKKISLYATAAVAEFGKSGSTTASSRVAFPVYQFLTDVLDADGRTRETFNNYVREVGTYGQLDHERKSLGGKQGGGMYLMYEFKRDPGEIKKRLEQDERIADLSHHEDGLNRVIQAQKRNFAED", - "output": "ATP binding ; DNA replication" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MADEKPSNGVLVHMVKLLIKTFLDGIFDDLMENNVLNTDEIHLIGKCLKFVVSNAENLVDDITETAQIAGKIFREHLWNSKKQLSSDISSDGEREANMPGLNIRNKEFNYLHNRNGSELDLLGMRDLLENLGYSVVIKENLTAQEMETALRQFAAHPEHQSSDSTFLVFMSHSILNGICGTKHWDQEPDVLHDDTIFEIFNNRNCQSLKDKPKVIIMQACRGNGAGIVWFTTDSGKASADTHGRLLQGNICNDAVTKAHVEKDFIAFKSSTPHNVSWRHETNGSVFISQIIYYFREYSWSHHLEEIFQKVQHSFETPNILTQLPTIERLSMTRYFYLFPGN", - "output": "endoplasmic reticulum ; cysteine-type endopeptidase activity involved in execution phase of apoptosis ; proteolysis ; regulation of apoptotic process" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MTEAMKITLSTQPADARWGDKATYSINNDGITLHLNGKDDLGLIQRAARKIDGLGIKQVALTGEGWDTERCWAFWAGYKGPKGVRTVMWPDLDDAQRQELDNRLTIIDWVRDTINAPAEELGPEQLAQRAVDLLCSVACDSVTYRITKGEDLREQNYMGLHTVGRGSERPPVLLALDYNPTGDKDAPVYACLVGKGITFDSGGYSIKQSAFMDSMKSDMGGAATVTGALAFAITRGLNKRVKLFLCCADNLISGNAFKLGDIIRYRNGKNAEVMNTDAEGRLVLADGLIDASAQHPQLIIDMATLTGAAKTALGNDYHALFSFDDTLAGRLLTSAAQENEPFWRLPLAEFHRNQLPSNFAELNNTGSAAYPAGASTAAGFLSHFVENYREGWLHIDCSATYRKAPVEQWAAGATGLGVRTIANLLTA", - "output": "cytoplasm ; manganese ion binding ; metalloaminopeptidase activity ; proteolysis" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MHNQYGSIFSITTWGESHGPAIGVVIDGCPAGLSLSPEDFLPAMARRRPGQLHTSPRQEPDLVTILSGVYQNKTTGTPISLLIENKDVSSSSYEQLQHCYRPGHAQFAYEGKYGFADNRGGGRASARETASRVAAGVIAKKILLSQRIETLAFLSGFGTLESKNYPKLSDSLIQQVHTSPFYTLLPQEEIQNLLLLNPDDSFGGVVSFITSPLPIGLGEPVFGKLPALLAAAMMSIPAAKGFEIGAGFSSSQMTGSAYLDAFIADESGVSLQSNRCGGALGGISIGQPLEGRVAFKPTSSIKKPCSSVLKDGTLIAYRTPNQGRHDPCVAIRAVAVVEAMLDLTLVDLLLQHRCTQL", - "output": "cytosol ; chorismate synthase activity ; FMN binding ; amino acid biosynthetic process ; aromatic amino acid family biosynthetic process ; chorismate biosynthetic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MRLETLPSEFQEALPVLEKIKAAGFEAYFVGGSVRDALLQRPIHDVDIASSSYPEETKRIFDRTVDVGIEHGTVLVLENNREYEVTTFRTEDVYVDYRRPSKVSFVRSLEEDLKRRDFTINALALDENGQLIDLFQGLDDLENRILRAVGTPAERFNEDALRIMRGFRFQATLNFDLEQDTLSAMTDCAPLLEKISVERIFIEFDKLLLAPFWRKGLEALLTSGAIEFLPDLKGSRAKLEQLFELDSDFCFSASEQAWAALLLALKTQEVQRFLRIWKTSREFAKRVADIVEIVTIRSERDLTKRDCYDYDIDLLLQAEELRQAQGLAVDFSAIHNLDASLTIHSKQEMVVNGGMLMRDFGFEPGPKLGQILKELEYAIVDGHLPNDLEAIYAYIKEKK", - "output": "ATP binding ; CCA tRNA nucleotidyltransferase activity ; magnesium ion binding ; tRNA binding ; RNA repair ; tRNA 3'-terminal CCA addition" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MAVRIEVLKEDNRTRARLGKLHTPHGVIETPVFMPVGTQATVKTMTPEELKDLGAGIILSNTYHLFLRPGHELIREAGGLHAFMHWDGAILTDSGGFQVFSLGDLRKITEEGVEFRSHLDGSKKFLSPEIATQVQMALGSDIVMAFDECTPYPATRDYAKASLERTTRWLKRCQETLTTTDRQALFGIVQGSMYEDLRKQSAAEITELDLPGYAVGGLSVGEPKELMYEVLDYTVPLLPKDKPRYLMGVGSPDALIEGVMRGIDMFDCVLPTRIARNGTALTRYGKLVVRNAESAHDFSPIDPTCDCYTCKNYSRAYLRHLIKADEILGLRLMTIHNLRFLTNLMSEIRAAIKENRLPEYREKFFYEYGYLK", - "output": "metal ion binding ; queuine tRNA-ribosyltransferase activity ; queuosine biosynthetic process ; tRNA-guanine transglycosylation" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MRESLKLSLFYFNKKERNKMNYTTQMDAAKRGIVTKEMETIAKKEGIDVKKIIECVAKGSVAIPANKNHKSLSAEGVGQGLRTKINVNLGISKDCCNVDRELEKVKKAIDMKAEAIMDLSCFGKTQEFRKRLIEMSPAMIGTVPMYDAIGFYDKELKDITAEELLDVIETHAKDGVDFMTIHAGLNREAVEIFKRNERLTNIVSRGGSLLYAWMELNNKENPFYEHFDKVLDICEKYDVTISLGDACRPGSIHDSTDASQIKELMTLGELTKRAWERNVQIIIEGPGHMSLDEIETNMKLEKKLCYNAPFYVLGPIVTDIAPGYDHITSAIGGAIAATYGADFLCYVTPAEHLRLPDLDDMKEGIIATKIAAHAADIAKGIKGAREWDNKMSVARKELDWEKMFDLAIDNEKARKYRKNSTPEVNDSCTMCGKMCAVRNMNKVMQGKDINILRNEDK", - "output": "4 iron, 4 sulfur cluster binding ; carbon-carbon lyase activity ; zinc ion binding ; thiamine biosynthetic process ; thiamine diphosphate biosynthetic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MHNDKDLSTWQTFRRLWPTIAPFKAGLIVAGIALILNAASDTFMLSLLKPLLDDGFGKTDRSVLLWMPLVVIGLMILRGITSYISSYCISWVSGKVVMTMRRRLFGHMMGMPVAFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSIILVVLAPIVSIAIRVVSKRFRSISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNKMRLQGMKMVSASSISDPIIQLIASLALAFVLYAASFPSVMDSLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDSEQEKDEGKRVIDRATGDLEFRNVTFTYPGREVPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRFYDIDEGHILMDGHDLREYTLASLRNQVALVSQNVHLFNDTVANNIAYARTEEYSREQIEEAARMAYAMDFINKMDNGLDTIIGENGVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEQADEIVVVEDGIIVERGTHSELLAQHGVYAQLHKMQFGQ", - "output": "plasma membrane ; ABC-type transporter activity ; ATP binding ; ATP hydrolysis activity ; ATPase-coupled lipid transmembrane transporter activity" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MVKNHNPKNEMQDMLTPLDAEEAAKTKLRLDMREIPKSSIKPEHFHLMYLLEQHSPYFIDAELTELRDSFQIHYDINDNHTPFDNIKSFTKNEKLRYLLNIKNLEEVNRTRYTFVLAPDELFFTRDGLPIAKTRGLQNVVDPLPVSEAEFLTRYKALVICAFNEKQSFDALVEGNLELHKGTPFETKVIEAATLDLLTAFLDEQYQKQEQDYSQNYAYVRKVGHTVFKWVAIGMTTLSVLLIAFLAFLYFSVMKHNERIEKGYQAFVKDDYTQVLNTYDDLDGKKLDKEALYIYAKSYIQTNKQGLEKDKKENLLNNVTPNSNKDYLLYWMELGQGHLDEAINIATYLDDNDITKLALINKLNEIKNNGDLSNDKRSEETKKYNDKLQDILDKEKQVKDEKAKSEEEKAKAKDEKLKQQEENEKKQKEQAQKDKEKRQEAERKK", - "output": "plasma membrane" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MLVWLAEHLVKYYSGFNVFSYLTFRAIVSLLTALFISLWMGPRMIARLQKLSFGQVVRNDGPESHFSKRGTPTMGGIMILTAIVISVLLWAYPSNPYVWCVLVVLIGYGIIGFVDDYRKVVRKDTKGLIARWKYFWMSVIALGVAFALYLVGKDTPATQLVVPFFKDVMPQLGLFYILLSYFVIVGTGNAVNLTDGLDGLAIMPTVFVAAGFALVAWATGNMNFANYLHIPYLRHAGELVIVCTAIVGAGLGFLWFNTYPAQVFMGDVGSLALGGALGIIAVLLRQEFLLVIMGGVFVVETLSVILQVGSFKLRGQRIFRMAPIHHHYELKGWPEPRVIVRFWIISLMLVLIGLATLKVR", - "output": "plasma membrane ; metal ion binding ; phospho-N-acetylmuramoyl-pentapeptide-transferase activity ; UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate transferase activity ; cell cycle ; cell division ; cell wall organization ; peptidoglycan biosynthetic process ; regulation of cell shape" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MAFDETYNEPESTEVLVKSLDPEHPAQLHYAHAGDAGADLITTVDVTLKPFERALVPTGVAIALPAGYVALVHPRSGLAAKQGVTVLNAPGTVDAGYRGEIKVPLINLDPKHTAVFHPGDRIAQLVIQRYVEARFIPAETLPGSDRAERGFGSTGVAS", - "output": "dUTP diphosphatase activity ; magnesium ion binding ; dUMP biosynthetic process ; dUTP catabolic process" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MATTSYRLVVAPAGSQRSSTGNVVVTTTSSGSHSSNGANGGTGGTSAGSSTLGSGLNVTTITATSGGQLQSAGNTSQSNGTTYKIEMLEEDIQSLGSDDDDEDLISSDGSLYEGDLGSMPVNDDVAHQLAAAGPVGVAAAAAIASSKKRKRPHCFETNPSVRKRQQNRLLRKLRAIIYEFTGRVGKQAVVLVATPGKPNTSYKVFGAKPLEDVLRNLKNIVMDELDNALAQQAPPPPQDDPSLFELPGLVIDGIPTPVEKMTQAQLRAFIPLMLKYSTGRGKPGWGRESTRPPWWPKELPWANVRMDARSEDDKQKISWTHALRKIVINCYKYHGREDLLPTFADDEDKVNALISQSGDEDEDMELSNPPTIHTVTTMTPPTGNSNQPQQVNVVKINSAGTVITTHTAQSNTPAPTIIQSTNNQHVTTTATLPASTKIEICQAPAQNQQHHQHHQTHLPNAVHIQPVAGGQPQTIQLTTASGTATATAVQTTAAAVSAAQAHAHSQSQAHSQSSANQTVTAQQIANAQVCIEPITLSDVDYTTQTVLSQNADGTVSLIQVDPNNPIITLPDGTTAQVQGVATLHQGEGGATIQTVQSLTDVNGHENMTVDLTETQDGQIYITTEDGQGYPVSVSNVISVPVSMYQSVMANVQQIQTNSDGTVCLAPMQVENGDQLETITMSPGMHQMMIQGGPGQEPQLVQVVSLKDATLLSKAMEAINSGNVKSEDTIIMEQ", - "output": "nucleus ; DNA binding ; DNA-binding transcription factor activity, RNA polymerase II-specific ; RNA polymerase II cis-regulatory region sequence-specific DNA binding ; adult somatic muscle development ; central nervous system development ; imaginal disc morphogenesis ; muscle organ development ; negative regulation of synaptic assembly at neuromuscular junction ; positive regulation of canonical Wnt signaling pathway ; regulation of transcription by RNA polymerase II" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MTLENRSTCLMTCQSSLLPKKPRFLSQKMWAPHLVVAYLIFVTLALALPGTQTRFSQEPADQTVVAGHRAVLPCVLLNYSGIVQWTKDGLALGMGQGLKAWPRYRVVGSADAGQYNLEITDAELSDDASYECQATEAALRSRRAKLTVLIPPEDTRIDGGPVILLQAGTPYNLTCRAFNAKPAATIIWFRDGTQQEGAVTSTELLKDGKRETTISQLLIQPTDLDIGRVFTCRSMNEAIPNGKETSIELDVHHPPTVTLSIEPQTVLEGERVIFTCQATANPEILGYRWAKGGFLIEDAHESRYETNVDYSFFTEPVSCEVYNKVGSTNVSTLVNVHFAPRIVVYPKPTTTDIGSDVTLTCVWVGNPPLTLTWTKKDSNMVLSNSNQLLLKSVTQADAGTYTCRAIVPRIGVAEREVPLYVNGPPIISSEAVQFAVRGDGGKVECFIGSTPPPDRIAWAWKENFLEVGTLERYTVERTNSGSGVLSTLTINNVMEADFQTHYNCTAWNSFGPGTAIIQLEEREVLPVGIIAGATIGAGILLVFSFAALVFFLYRRRKGSRKDVTLRKLDIKVETVNREPLTMHSDREDDTTSISTATRVMKAIYSSFKDDVDLKQDLHCDTIETREEYEMKDPTNGYYNVRAHEDRPSSRAVLYADYRAPGPTRFDGRPSSRLSHSSGYAQLNTYSRAPASDYGTEPTPSGPSAPGGTDTTSQLSYENYEKFNSHPFPGAAGYPTYRLGYPQAPPSGLERTPYEAYDPIGKYATATRFSYTSQHSDYGQRFQQRMQTHV", - "output": "cell projection membrane ; cell-cell junction ; dendritic shaft ; membrane raft ; perinuclear region of cytoplasm ; plasma membrane ; cell adhesion molecule binding ; myosin binding ; cell-cell adhesion ; cell-cell junction maintenance ; glomerular filtration ; negative regulation of protein phosphorylation ; positive regulation of actin filament polymerization ; renal protein absorption" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MLKMESTQQMVSSIINTSFEAAVVAATSTLELMGIQYDYNEVFTRVKSKFDYVMDDSGVKNNLLGKAITIAQALNGKFGSAIRNRNWMSDSKTVAKLDEDVNKLRMTLSSKGIDQKMRVLNACFSVKRIPGKSSSIIKCTRLMKDKIERGEVEVDDSYVDEKMEIDTIDWKSRYDQLEKRFESLKQRVNEKYNTWVQKAKKVNENMYSLQNVISQQQNQIADLQQYCNKLEADLQGKFSSLVSSVEWYLRSMELPDDVKTDIEQQLNSIDLINPINAIDDIESLIRNLIQDYDRTFLMLKGLLKQCNYEYAYE", - "output": "host cell cytoplasm ; RNA binding ; regulation of translation" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MKIGIIGATGYGGAEIMRIMRTHPYADECILYSSSDEGARYDAAYPHLVKLTDQHLQPIEVKRIANEIDFLFMAAPPGISSRLTPQFDAYDIPIIDLSGDLRIQNPSVYEKWYKREAAPEHVLQKAVYGLSELNREDIKTAQYIANPGCFPTAVLLGLAPLVKSGSINESFVIIDAKTGVSGAGRKPSMGTHFSEVNDNFKIYKVNEHQHTPEIEQTVKQWNSAFKPITFSTHLVPMTRGIMATIYTELKDSMDAEQLQLIFSKFYKDSYFVRVRETGSFPATKEVYGSNFCDIGVTVDERTNRVTIVSVIDNLMKGAAGQAVQNFNIMNGLSETAGLEFTPIYP", - "output": "cytoplasm ; N-acetyl-gamma-glutamyl-phosphate reductase activity ; NAD binding ; NADP+ binding ; protein dimerization activity ; arginine biosynthetic process" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MTDEKVINKKLVGDNKLFRHQAKFVAGAMDIKQLPNFALPQIAFVGKSNVGKSSLINTICNNKKLAKVSNTPGRTRQINFFNLVDKLIIVDLPGYGFAQVPNQVKDQWEILINHYLRKSDNLKLVNLLIDSRRGIKENDKKVAELLLANKRDFQIIFTKSDKVTDRKNLNLEAQNFLATLNYSCNLIYVSSRSKEGARELKTSLAKCIKLEK", - "output": "GTP binding ; metal ion binding ; division septum assembly" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MLNSFKLSLQYILPKLWLTRLAGWGARKRAGWLTKLVIDLFVKYYKVDMKEAQKPDTASYRTFNDFFVRPLRDDVRPVNTDPNVLVMPADGVISQSGKIEEDKILQAKGHNYSLEALLAGNYLMADLFRNGSFVTTYLSPRDYHRVHMPCNGILREMIYVPGDLFSVNHLTAQNVPNLFARNERVICLFDTEFGPMAQILVGATIVGSIETVWAGTITPPREGVIKRWTWPEGESEGSVALLKGQEMGRFKLGSTVINLFAPGKVTLAEQLQSLSVTKIGQPLAVSTELFVTPEAEPAPLPEEEINAEHDASPLVDDKKDES", - "output": "plasma membrane ; phosphatidylserine decarboxylase activity ; phosphatidylethanolamine biosynthetic process" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MTQTLSQLENSGAFIERHIGPDAAQQQEMLNAVGAQSLNALTGQIVPKDIQLATPPQVGAPATEYAALAELKAIASRNKRFTSYIGMGYTAVQLPPVILRNMLENPGWYTAYTPYQPEVSQGRLEALLNFQQVTLDLTGLDMASASLLDEATAAAEAMAMAKRVSKLKNANRFFVASDVHPQTLDVVRTRAETFGFEVIVDDAQKVLDHQDVFGVLLQQVGTTGEIHDYTALISELKSRKIVVSVAADIMALVLLTAPGKQGADIVFGSAQRFGVPMGYGGPHAAFFAAKDEYKRSMPGRIIGVSKDAAGNTALRMAMQTREQHIRREKANSNICTSQVLLANIASLYAVYHGPVGLKRIANRIHRLTDILAAGLQQKGLKLRHAHYFDTLCVEVADKAGVLTRAEAAEINLRSDILNAVGITLDETTTRENVMQLFNVLLGDNHGLDIDTLDKDVAHDSRSIQPAMLRDDEILTHPVFNRYHSETEMMRYMHSLERKDLALNQAMIPLGSCTMKLNAAAEMIPITWPEFAELHPFCPPEQAEGYQQMIAQLADWLVKLTGYDAVCMQPNSGAQGEYAGLLAIRHYHESRNEGHRDICLIPASAHGTNPASAHMAGMQVVVVACDKNGNIDLTDLRAKAEQAGDNLSCIMVTYPSTHGVYEETIREVCEVVHQFGGQVYLDGANMNAQVGITSPGFIGADVSHLNLHKTFCIPHGGGGPGMGPIGVKAHLAPFVPGHSVVQIEGMLTRQGAVSAAPFGSASILPISWMYIRMMGAEGLKKASQVAILNANYIASRLQDAFPVLYTGRDGRVAHECILDIRPLKEETGISELDIAKRLIDYGFHAPTMSFPVAGTLMVEPTESESKVELDRFIDAMLAIRAEIDQVKAGVWPLEDNPLVNAPHIQSELVAEWAHPYSREVAVFPAGVADKYWPTVKRLDDVYGDRNLFCSCVPISEYQ", - "output": "cytosol ; glycine cleavage complex ; glycine binding ; glycine dehydrogenase (decarboxylating) activity ; identical protein binding ; pyridoxal phosphate binding ; glycine decarboxylation via glycine cleavage system ; one-carbon metabolic process" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MKHIVKHIHFVGIGGAGMSGIAEVLVNLGYQVSGSDLARNAVTERLEALGARVSIGHDAANIEGANAVVVSTAVRSDNPEVLAARRLRVPIVPRAVMLAELMRLKQGIAIAGTHGKTTTTSLVASVLAAGGLDPTFVIGGRLTSAGANARLGTGDFIVAEADESDASFLNLYPVIEVITNIDADHMDTYGHDFARLKQAFIEFTQRLPFYGSAVVCIDDANVRQIVPLISKPVVRYGFAADAQVRAENVEARDGRMHFTVRREGREPLPVVLNLPGLHNVQNALAAIAIATDLDVADAAIQQALAEFNGVGRRFQRYGEIAAAGGGAYTLIDDYGHHPVEMAATIAAARGAFPGRRLVLAFQPHRYTRTRDCFDDFVNVLSTVDALVLTEVYAAGEAPISTANGDALSRALRAAGKVEPVFVATVDEVPDALAKLARDGDVVITMGAGSIGGVPGKLAQDTQQKG", - "output": "cytoplasm ; ATP binding ; UDP-N-acetylmuramate-L-alanine ligase activity ; cell cycle ; cell division ; cell wall organization ; peptidoglycan biosynthetic process ; regulation of cell shape" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MSTYSKKTSYTVKSSSSGSIPRNFSSLSYSGPSMSRQSYSARSSYGGVNRGMGAGMGGGSGFISSSSAYGLGMGMGTGMGAGVVAPIQAVTVNKSLLAPLNLEIDPNIQIVRTQEKEQIKTLNNRFASFIDKVRFLEQQNKMLETKWSLLQNQTATRSNIDAMFEAYIANLRRQLDSLGNDKMKLEADLHNMQGLVEDFKNKYEDEINKRTECENEFVLIKKDVDEAYMNKVELEAKLESLTDEINFLRQIFEEEIRELQSQIKDTSVVVEMDNSRNLDMDAIVAEVRAQYEDIANRSRAEAEMWYKSKYEEMQTSANKYGDDLRSTKTEIADLNRMIQRLQSEIDAVKGQRANLENQIAEAEERGEMAVRDAKGRIKDLEDALQRAKQDMARQIREYQDLMNVKLALDIEIATYRKLLEGEEDRLATGIKAINISKQSTSYGGYPMESAGSSYSTYSSGYSSGLSGGYGGGYSGGYSGGYSSGSGYSDTVSQTKKSVVIKMIETKDGRVVSESSEVVQD", - "output": "cytoplasm ; keratin filament ; nuclear matrix ; nucleoplasm ; structural constituent of skin epidermis ; keratinization" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MICPDCGKGIEATFKFCPYCGKPLPAEKHEGSQSFVKPFTSSSQGSRRKTNTSSETSSKKVKWCSYAASPSLPLPSEGKSSGSEDTLSTSGKPKGHLSRSPTPRSSPQTTRQSPQTLKRSRMTASLEALPVGTVLTDKSGQHWKLRCLQTRDDQGILYEAESDSTTGSESSPQKQRFSLKLDAKDGRLFNEQNFFQRAAKPLQVNKWKKLYSIPQLAIPTCIGFGVHQDKYRFLVFPTLGRSLQSILDDFPKHVMSVRSVFQMACRLLDALEFLHENEYVHGNVTAENIFVNPENLCQVTLAGYGFTFRYSPGGRHVAYTEGSRSPHEGHLEFISMDLHKGCGPSRRSDLQTLGYCLLKWLYGTLPWTNCLPNTEEIVKLKQKFLDNPEGLVGQCSRWITPSETLQEYLKVVMALQYEEKPPYSTLRNELEALLQDLRASAYDPLDLQVVP", - "output": "nucleoplasm ; nucleus ; ATP binding ; protein phosphatase binding ; protein serine/threonine kinase activity ; negative regulation of ERK1 and ERK2 cascade ; peptidyl-serine phosphorylation ; positive regulation of phosphoprotein phosphatase activity ; signal transduction ; skeletal muscle tissue development" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MTRPSLVRCYSLFFTALIVMAIICPAWSEEIPKSRKKRAIPIAYVGMAVAPQVFRWLVRAYGAAAVTAAGVTLRRVINRSRSNDNHSCYGNRGWCRSSCRSYEREYRGGNLGVCGSYKCCVT", - "output": "extracellular region ; defense response to fungus ; defense response to Gram-negative bacterium ; defense response to Gram-positive bacterium ; killing of cells of another organism" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MANLKAIRDRIQSVKNTKKITEAMRLVAAARVRRAQEQVLATRPFADRLAQVLYGLQSRLRFEEANLPLLRKREVKSVGLLVISGDRGLCGGYNNNVIRRAENRAKEIKAEGLNYQFVLVGRKSTQYFQRRDQPIDATYSGLEQIPTAAEANQIADQLLSLFLSEEVDRIELIYTRFLSLVSSRPVVQTLLPLDPQGLEAADDEIFRLTTRGGKFEVEREKVASQVRPLAPDMIFEQDPVQILDSLLPLYLSNQLLRALQESAASELAARMTAMSNASENAGELINTLTLSYNKARQAAITQELLEVVGGAEALT", - "output": "plasma membrane-derived thylakoid membrane ; proton-transporting ATP synthase complex, catalytic core F(1) ; ATP binding ; proton-transporting ATP synthase activity, rotational mechanism" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MSRKYFGTDGVRGKVGTFPITPDFAMRLGWAAGTVLASTGTKEVLIGKDTRISGYMLESAMEAGFSAAGVNVALIGPMPTPAVAYLASTFRADAGVVISASHNPFYDNGIKFFSNTGTKLNDAQELEIEALLEQALEHNALQCVASEKLGKVRRIDDAAGRYIEFCKGTFPNHLSLAGLKIVVDSAHGAAYHIAPNVYRELGAEVISINDKPNGVNINDHCGATHLDSLQSAVMIHEADLGIALDGDADRVMFVDHNGHVVDGDEILFILAQAAYQKGEMQGGVVGTLMSNLGLELALKGMDIPFVRAKVGDRYVVEQLKETGWQLGGEGSGHILSLKHASTGDGIVASLQVLKAVLESGKRLAELKAEMTKLPQVLINVRLTSGCADSILSKDSVKQAVIAAEEVLGNQGRVLLRKSGTEPLIRVMVESTDISLTQQQAEYIAQAVKVA", - "output": "magnesium ion binding ; phosphoglucosamine mutase activity ; carbohydrate metabolic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MWLGLRLFHRPFSSLAARGLVYEKHGEPLQVLRLKNVNITHPADNEVRVKMLAAPINPSDINMVQGTYALLPQLPAVGGNEGVGVVVEIGRHVSSMRPGDWVVPVDAGLGTWCTEAVFSEDSLVRVPSDIPVAGAATVSVNPCTAYRLLSDFETLRPGDTIIQNASNSGVGQAVIQIATSLGITTINVVRDREDLSSLIQRLRDLGADHVITEEQLRKPEMKDLFKNCPRPRLALNCVGGKSTTEMLRHLDYGGTMVTYGGMSKQPVTVPVSALIFKNVKLCGFWVTQWKKERAQTDREEIVKMIRDLCDLIRRGKLVPPPSTQRPLEDFSRALQDSQTPFLSRKQILIM", - "output": "mitochondrion ; oxidoreductase activity ; fatty acid biosynthetic process ; pronephric nephron tubule development" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MSDEPPIVLPTEEDGPFSNCVSIAFVNDKSIPVELRIRKAIRGKVTFTQELVVAARRLYLDGELERPDLNYHVAADFYDPFMIPVPDHRNWEYNPLYPREWPRLIDRDLVQKIKMSNTYKKNQARRKRRRLLRIFHRKRGGEFLNYLWHSKENDVHYKRYMAAYQFPLPFEKCIRDVVREELKDPETSFSKPPSVVHHSKIRPATPDLLKLAKYLGKDRFCFIVTPFKFRSQFRLRYYKKSPFKRSNILEKWLKFKKVRDQGVFNIRDAAREVKKLLQRKNVYHMTDPQCEQEFWDVYRLQMQWLEEDNIEENITMLRENLSKVTDEEFNRSVYIMRPENRASIHDDVTFTTDAEINLKPIVLELFRNNMPLEDIRQVKECIDDMINLTVCQELIPQVATIETVRDYSGVEQHRLKYIRPENELEIMFQLATVLVKNENTHDQEITSPMFALLRTEQYLWSIPLRPFLRMYTDWRKTKLNFKKFRKFSPELVSKAPIDLFKVFLTTNMDKKGVATKDTDCFDYRTASEIKKLYHEEFIRVRPIIEHQRFHRCYTSVITEEPLPNPFYWVHRGQWEKVYECNWKQRVKPLAGRFSWKTKHPNICDLPRLEKDDKQEMEMLAKMREKIREYNKEKEKHPFYVSSSLPEFASTSDFVKFPISNTGIKYTAPRRNQPKVQRSLVTYTRFRLAELEDKDFSFPEEKMLEKNRLLEKLNFEERLQLDALMSKDVKYKPRMIPEKGFLQLQDEKLILKRLCEKEDEWSGKQKRRFPDLYEQATQEAERLGDPDASTSGTSNKELGLLPVWKHDDFRDLKKINVLGSKEYPISSPYLIKRLHYDIHLEIVRDKLKSWIYRTELWEKMKPVYERLKRDKEKREKEWHEMRAAQRAQKEKEEEDQRRMDMGIEHGQESLLKSITPEVEQQILLPISRENSFEEMLPAPQEAYDEDLDQDIDIHFDGAESVCTGIRLDSEDRELVDSPDQVENEEPERVEAVTENIRQEMSDAEMRDLMRKKREQYSMLFPNVPQPFQPLNRFDVTAPGAGIVPPYDEAPDFDLSAYLEEDHVRIPTLSTVEINSLLKDQDLVEEQEIVEEEETPLVVEEPDIPAAPVLSAEEKASRISREMSALRKLPDAAFNYASDRDGVVVEEVETIEEIQEIYNDKLEKMIAARLGSIAQGANIERLSEDQLLGDQGSEDISFEEIQVDLLLESGVEVQVNQSVTISRSSTSFESLLVEDPEEHPEQLPVSASEKANNQIVPEVEVEGSVVPVTNQQEENVTSEGPTLQEGSSIPSSSHIYTVDELLGTESPGPEATETPVAEESPKKKSGKTTRGRPKKVKENLKKRIQPRRGQKEEAAHEPEVVEEQEQVEPEVGPEVVHEPVPAPAAQLETEPIEQQIEEPDKVFEPIIEALPLFETSPVPAPEGNIPSRAHSSDDDVQVISSETDPNGPINLVEQVQNDKLTAYQYSTEELLGEYGELDEAGAPSPSEIVVHDEVLQDEVLQPNPKSSKKRGRRRKKTPPHIAKARKVFTSISKTEEIELAPTPTQQSRKRMANVSSEEATATRRQKRAKVEEPNDSDVSRVLTPEPEDLHETERPGHVGEEGFETPSLRTGRESTASSVKTSRSKRLFLSKNNPVPRMRIQSQAGTNASPTPARRTGVARDSVSPDGASEKLKQLPKSVQDIFEVFDVERSAERGESATVTNLEGPVKIEIEDENWMAPPAITETSRKSKKRLRAEKQQQILDDIKLELNGEPPQKRECEILMERVQVKIEEGVENADCRIVQANFNCKSVEEHETLPLKIIRVFEENEKPVHKFFMTQIIWKEINEAFMTDPEKFMLLVRILFSDRNISGQIYKISMTVTDRIKGFDDDFIKLLTQFPKKLSQEHKPLVDYNKLAHALREKASLHLNNHKITPFTFHGVISNITEMKEKIIGRCEIGMLTDGDRDVLNSTENMLLGAYMKSVLRMTAQSQVSWAHPEYIKRRLEMIYYGWRMFLGSGGFFRVALAINRKDVKPMSQQFRDFFIEYLKDVNENYAKAVELVQMDEDKLMEAMIEKAGLSSIDLLALDEDVQGQVSESHKHKCVQCSIRNQSVYFSSYSLLELHGKLHQNLHELAPEDADDCQDCYETLTSSFEVIVHRINHHHSRRCFFADD", - "output": "nucleus ; X chromosome ; metal ion binding ; sequence-specific DNA binding ; dosage compensation by hypoactivation of X chromosome ; dosage compensation complex assembly involved in dosage compensation by hypoactivation of X chromosome ; mitotic sister chromatid segregation ; negative regulation of gene expression ; negative regulation of transcription by RNA polymerase II ; sex determination" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "RTCESQSHKFKGPCFSDSNCATVCRTENFPRGQCNQHHVERKCYCERSC", - "output": "defense response to fungus ; killing of cells of another organism" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MAEITAKLVKELREKSGAGVMDAKKALVETDGDMDKAVELLREKGMAKAAKKADRVAAEGLTGVYVHGNVAAVVEVNAETDFVAKNAQFVELVNATAKVIAEGKPANNDEALALVMPSGETLAEAYVNATATIGEKISFRRFALIEKTDEQHLGAYQHNGGRIGVISVVEGGDDALAKQVSMHIAAMKPTVLSYTELDAQFIKDELAQLNHAIELDNESRAMVDKPALPFLKYGSKAQLSDDVITAAEADIKAELAAEGKPEKIWDKIIPGKMDRFMLDNTKVDQAYTLLAQVYIMDDSKTVEAYLDSVNAKAIAFARFEVGEGIEKKANDFESEVAATMAAALNN", - "output": "cytoplasm ; translation elongation factor activity" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MSWWQVISLAVVQGLTEFLPVSSSGHLAVVSRVFFSDDAGASFTAVTQLGTEAAVLVYFARDIVRILRAWFDGLVVKSHRNADYRLGWYVIIGTIPICVLGLLFKDEIRSGVRNLWVVATALVVFSGVIALAEYLGRQSRHVEQLTWRDGLVVGVAQTLALVPGVSRSGSTISAGLFLGLDRELAARFGFLLAIPAVFASGLFSLPDAFHPVTEGMSATGPQLLVATLIAFVVGLAAVSWFLRFLLRHSMYWFVGYRVVVGVVVLILLATGTVAAT", - "output": "plasma membrane ; undecaprenyl-diphosphatase activity ; cell wall organization ; dephosphorylation ; peptidoglycan biosynthetic process ; regulation of cell shape ; response to antibiotic" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MQIFLVLALCGLAAAVPSEDRKLSDKATTLADRSTTLAFNLYHAMAKDKNMENILLSPVVVASSLGLVSLGGKATTASQAKAVLSADKLNDDYVHSGLSELLNEVSNSTARNVTWKIGNRLYGPASINFADDFVKNSKKHYNYEHSKINFRDKRSALKSINEWAAQTTDGKLPEVTKDVEKTDGALIVNAMFFKPHWDEKFHHKMVDNRGFMVTRSYTVGVPMMHRTGLYNYYDDEAEKLQVVEMPLAHKLSSMIFIMPNHVEPLERVEKLLNREQLKTWASKMKKRSVAISLPKVVLEVSHDLQKHLADLGLTEAIDKTKADLSKISGKKDLYLSNVFHAAALEWDTDGNPYDADIYGREEMRNPKLFYADHPFIFMIKDSKTNSILFIGRLVRPKGDKMRDEL", - "output": "endoplasmic reticulum ; endoplasmic reticulum lumen ; extracellular space ; collagen binding ; serine-type endopeptidase inhibitor activity ; collagen fibril organization ; negative regulation of endopeptidase activity" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MRSLQAPVVCPSVRPRQLGVSALLVNCSVSKTRSLRKQFWGNQTKNDKSQAATVNLRLHLRRYKSIKCLFSSHSDGTGSTAENFNENDEDYVKSSVLEAVEVKSGPDGFMVKMKDGRQLRCVHNNPQGGNLPNYAPHSAIVLKMEDGTGLLLPIIVLEMPSVLLMAAMTNVQIARPTMYQVVKDMVDKMGYEVRLVRVTTRVHEAYFAELYLSKVGDKSDCVSFDLRPSDAINIAVRCKVPIQVNKYLAYSDGMRVIDSGKLSKQTPASDGLLFTELDRPNGQPCFDTKEFDLVRNMMQAVDEERYDEAAEWRDKLGKFQAKRKLRKYT", - "output": "nucleus ; VCB complex ; nuclease activity ; protein ubiquitination" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MPIEFIATSKLPTAFGEFNISVFQDPVTGEEHVALSKGLENPPTDPVLVRVHSECLTGDAFASLKCDCGPQLQATQKLINEAGQGVILYLRQEGRGIGLTNKIRAYALQDQGHDTVDANLLLNLPADARRYDMCSIMLDHLKVKEVKLITNNPLKIQALKDQGINVVDRVPLTVGRNPFNEQYLKTKRERMAHLYQKDDF", - "output": "GTP binding ; GTP cyclohydrolase II activity ; zinc ion binding ; riboflavin biosynthetic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MKKIKVRYAPSPTGFLHIGNARTALFNYLFAKHNQGEFIIRIEDTDFSRNVKGGEASQLKNLRWLGIDWSEGPDIQGPFGPYRQSERLAIYQKYAQKLLDQGLAYKEFQENTTTFAIRFRVPTNQTFSFDDLIRGKLTFQSQEIEDWVIIKSNGYPSYNFAVVIDDHLMQISHIFRGEEHITNTPKQIMIYQTFQWHLPQFAHMTLILNDNKKKLSKRDANIMQFIEQYEKLGYLPQALFNFLSLLGFSPLSQTEILSPQELINLFDVARLNKAPAMFDTVKLDYLNNQHLRKLTPEVIASFIVQKKYLTLTTAPTNDKEWMTKFVSLFQDRMNYIQQIADFYQLFFQTKPSLSQEATIFLQTNPQTTLILKTFYNVFDVIVFKKDVIFNAIKQVANQNDFSKKTLFMALRIGTTCKMHGPSIALLLELLGKKQVLKNLSYVLKQAQKF", - "output": "cytoplasm ; ATP binding ; glutamate-tRNA ligase activity ; tRNA binding ; zinc ion binding ; glutamyl-tRNA aminoacylation" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MTVSFRPTADLVDDIGPDVRSCDLQFRQLGGRTEFAGPISTVRCFQDNALLKSVLSEPGGGGVLVVDGGGSLHTALVGDVIAELARANGWAGLIVNGAVRDSAALRGMDIGVKALGTNPRKSTKTGAGERDVDITLGGVTFTPGDIAYSDDDGIVVAVGD", - "output": "4-hydroxy-4-methyl-2-oxoglutarate aldolase activity ; metal ion binding ; oxaloacetate decarboxylase activity ; ribonuclease inhibitor activity ; regulation of RNA metabolic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MTCGFSRADRSPYHGPVTSTVARDVSGVRTYQVRTYGCQMNVHDSERLAGLLEAAGYRRAAEGAEVADVVVFNTCAVRENADNKLYGNLSHLAPRKRSNPQMQIAVGGCLAQKDREAVLRRAPWVDVVFGTHNIGSLPTLLERARHNKAAQVEIAEALQQFPSSLPSARESAYAAWVSISVGCNNSCTFCIVPSLRGKEVDRSPDDILAEVRSLVADGVLEVTLLGQNVNAYGVSFADPALPRDRGAFARLLRACGEIDGLERVRFTSPHPAEFTDDVIEAMAQTPNVCPALHMPLQSGSDRVLRAMRRSYRAERYLGIIDRVRAAMPHAAITTDLIVGFPGETEEDFAATLDVVRRARFAAAFTFQYSKRPGTPAAELDGQIPKAVVQERYERLVELQESISLQGNQALVGQTVELLVATGEGRKDSATARMSGRARDGRLVHFAADDRVRPGDLVTTVITGAAPHHLIADAGILSHRRTRAGDAHAPAGARAASVSACPPSGRRRPGPTRWMCLMNDDRNHDDPRLGALRTEIEAAERRVAGGIDPGARGFVVSILVFVLLGSFILPHTGDVRGWDVLFGTHDAGAAAVALPSRVFGWLALVFGVGFSTLALVTRRWALAWIALAGTAIAGAAGMLAIWSRQTVPAGHPGPGWGLIVAWITVLVLIYQWARVVWSRTIVQLAAEEQRRRVAAQQQSTTLLDDLPKPEDPAAGT", - "output": "cytoplasm ; plasma membrane ; 4 iron, 4 sulfur cluster binding ; metal ion binding ; methylthiotransferase activity ; tRNA modification" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MSLLEQVSVSKKANIYFDGKVASRSVFLADGSKQTLGVVLPGEYEFSTSQGEVMEVTSGRFEVLLPESTVWQEFSEGTQFELAANVSFKIRNTAIAEYCCSYL", - "output": "guanosine phosphorylase activity ; purine-nucleoside phosphorylase activity ; pyrimidine-nucleoside phosphorylase activity ; thymidine phosphorylase activity ; uridine phosphorylase activity" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "DECFSPGTFCGIKPGLCCSARCLSFFCISLEF", - "output": "extracellular region ; host cell presynaptic membrane ; sodium channel inhibitor activity ; toxin activity" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MDSSTPQNYLAVIKVVGIGGGGVNAVNRMIEEGLRGVEFIAINTDAQALLMSDADVKLDVGRELTRGLGAGANPDVGRQAAEDHEEEIQEVLKGADMVFVTAGEGGGTGTGGAPVVARIARSLGALTIGVVTRPFTFEGRRRSNQAENGIETLRDEVDTLIVIPNDRLLSISDRNVSMLDAFKSADQVLLSGVSGITDLITTPGLINLDFADVKSVMQGAGSALMGIGSAQGEDRAVKAAELAIASPLLEASIDGAHGVLLSIQGGSDLGLFEINEAARLVQEVAHPEANIIFGAVIDDALGDQARVTVIAAGFDSVSQETNANNSSPAQRQAESTRAAFGGDASRPSGLGRSPQRGGNSYGAPAAGFGSRQGQGQDDDIPDDAGFDVDLPAEADAPSSSNTSARKDSLDFPDFLK", - "output": "cell division site ; cytoplasm ; GTP binding ; GTPase activity ; division septum assembly ; FtsZ-dependent cytokinesis ; protein polymerization" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MIDRYKHQQLRIGSVSPQQISAWAKKILPNGEMVGEVTKPYTFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRVIGDKKEDPKFCEQCGVEFVDSRVRRYQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCDFLFARPVAKKPTFLRLRGSFEYEIQSWKYSIPLFFTTQGFDTFRNREISTGAGAIREQLADLDLRLITDSSLVEWKELGEEGATGNEWEDRKIGRRKDFLVRRMELAKHFIRTNVEPERMVLCLLPVLPPELRPIIQIDGGKPMSSDINELYRRVIYRNNTLTDLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDSHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQHAASNIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAIFLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLMGLYVLTTGNHRGICANRYNPSNHRNYQNEKIDDNNYKYTKEPYFCSSYDALGAYRQKRIYLDSPLWLRWRLDQRVIASREVPIEVQYESLGTYHEIYGHYLIVRNVKKEILCIDIRTTVGHISFYREIEEAIQGFCRACSYGT", - "output": "chloroplast ; DNA-directed RNA polymerase complex ; DNA binding ; DNA-directed 5'-3' RNA polymerase activity ; magnesium ion binding ; zinc ion binding ; DNA-templated transcription" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MDFELKLLPLARICSEKCDALLVLIPQDLSAGGDDPLSALAALALKAGDLEAKPGKLLSAYRTPGIAATRVVLAGVGDASPRNVRTAVNAAMANLKNGNTQRVVVSLAAMNNAQPEIVRAAVVACSEAAYVYSTTKSKVSPVKLQRVVIGVNELSVARPGFDKALALVKGIEFAKEWANRPANHATPTLLAGAARELARLRNIKVEVLGPKEVAKLGMGSFMAVAQGTSEPLRFIVLRYEGAAKSVAPVVLIGKGITFDTGGISIKPAAEMDEMKFDMCGAASVLGTFRALAELQPALNVVGLIPASENMPGGRALKPGDVVTSMSGQTIEILNTDAEGRLVLCDALTYAERFKPRAVVDIATLTGACVIALGGVRSGLFSNNDELAQSLAAAGESSLDPCWRMPLDDDYAEGLKTNFADVANVAGRAGGAVTAAKFLHRFAGSFPWAHLDIAGTAWKGGAAKGATGRPVPLLLDYLLGQVTAAAPRKAQPKARSAKRSKPVSRTRA", - "output": "cytoplasm ; manganese ion binding ; metalloaminopeptidase activity ; proteolysis" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MRNSNRGPAFLILFATLMAAAGDGVSIVAFPWLVLQREGSAGQASIVASATMLPLLFATLVAGTAVDYFGRRRVSMVADALSGAAVAGVPLVAWGYGGDAVNVLVLAVLAALAAAFGPAGMTARDSMLPEAAARAGWSLDRINGAYEAILNLAFIVGPAIGGLMIATVGGITTMWITATAFGLSILAIAALQLEGAGKPHHTSRPQGLVSGIAEGLRFVWNLRVLRTLGMIDLTVTALYLPMESVLFPKYFTDHQQPVQLGWALMAIAGGGLVGALGYAVLAIRVPRRVTMSTAVLTLGLASMVIAFLPPLPVIMVLCAVVGLVYGPIQPIYNYVIQTRAAQHLRGRVVGVMTSLAYAAGPLGLLLAGPLTDAAGLHATFLALALPIVCTGLVAIRLPALRELDLAPQADIDRPVGSAQ", - "output": "plasma membrane ; transmembrane transporter activity ; response to antibiotic" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MSSKVGGGKGGKSKTSSEAKVLTTRSSKAGLQFPVGRIHRFLRNKNANNVRIGAKAAVYVASIMEYLTAEVLELAGNAAKDLRVKRITPRHLQLAIRGDEELDLLIRATIAGGGVLPHIHKSLVAKNAPLKKPKALDA", - "output": "euchromatin ; Ino80 complex ; nucleosome ; Swr1 complex ; chromatin DNA binding ; DNA binding ; identical protein binding ; protein heterodimerization activity ; RNA polymerase II cis-regulatory region sequence-specific DNA binding ; structural constituent of chromatin ; CENP-A containing chromatin assembly ; nuclear-transcribed mRNA catabolic process, non-stop decay ; positive regulation of transcription involved in G1/S transition of mitotic cell cycle ; regulation of transcription by RNA polymerase II ; silent mating-type cassette heterochromatin formation" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MTTNDAGRIPSAAGGAELAALYRLLTWLSPAFPIGGFSYSSGLEWAVEAGDICDAAALRGWLATMLTDGSGFCDAAFLVHAHRATELDDIKRLSEVAELAAAFVPSRERQLETAAQGRAFIEIARSAWSCAGLDEAVAQCDVVVYPVAVGMVGALHGVPLEPLLHGFLHALVSNWISAGSRLVPLGQTDSQRVLAALEPVVVATADRSLHASLDDIGSATFRADLASLRHETQYTRLFRS", - "output": "cytoplasm ; nickel cation binding ; nitrogen compound metabolic process" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MAKEKFEEAMAKLEALVRKMETGDMTLEESLKAFEEGIRLSRLCASRLDDAERRVEMLIAENSNVTVQPLRENGEKNES", - "output": "cytoplasm ; exodeoxyribonuclease VII complex ; exodeoxyribonuclease VII activity ; DNA catabolic process" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MSKVHNSEYIKELVVDNTSYKIYDINKAASDIGLPLKKLPYSLRVLLENVLRTNGNKENLLVFKEWLKTKKSNTEIDFMPARVLMQDFTGVPAIVDLAAMRDAMQKIGCNPLKINPLIPVDLVIDHSVSVDSYGNKESFDQNVHMEMKRNIERYQFLKWGQQAFNNFKVVPPGTGICHQVNLEFLSQVVWHNDGTAYPDSLVGTDSHTTMVNGLSVLGWGVGGIEAESAMLGQPITMIIPEVIGVKLIGKLAGMATATDLVLTITEILRRKKVVGKFVEFFGNGLRNLTISDRATISNMSPEYGATCGFFPIDQETLKYLEVTGREITQIKLVEKYAIEQNLWYNCEDTQEYTEVLELDLSTVYSSLAGPKRPQDRVNLNCVASNFQNELPYFALANKDIDKKYAVANQNYAIGNGDVVIAAITSCTNTSNPSVMIGAALLAKKALEHGLNVKPWVKTSLAPGSKVVTEYLKLSGLDKYLDALGFNLVGYGCTTCIGNSGSLNPEIENTINKNRLVVASVLSGNRNFEGRINPLTKASYLASPILVVAYALSGTLNIDLTNTPIGANIYLKDIWPSQKEIDEVIANSINSSMFIEKYADVFNGTKEWRDLQITTGTNYNWDKNSTYINNPPYFDNIGSEHSIKDIKSARILAIFGDSITTDHISPAGSISKNSPAAKYLIKHHIEPLDFNSYGSRRGNHEVMMRGTFANIRIKNEMCNGVEGGFTINQLSGVQQTIYDTAMDYKAHDIPLVIFAGKEYGSGSSRDWAAKGPGLLGIKAVIAESFERIHRSNLVGMGILPLTFTGKNTRLNLKLDGSEIIDLIGLSENIKPYNLVKCVIKKQTNEISTIDLILQIFTENEINYIKHGSIMQFVVESLKG", - "output": "2-methylisocitrate dehydratase activity ; 4 iron, 4 sulfur cluster binding ; aconitate hydratase activity ; citrate dehydratase activity ; metal ion binding ; mRNA 3'-UTR binding ; mRNA binding ; propionate metabolic process, methylcitrate cycle ; tricarboxylic acid cycle" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MAERSQNLQDLFLNSVRKQKISLTIFLINGVKLTGIVTSFDNFCVLLRRDGHSQLVYKHAISTIMPSQPVQMFEGEEA", - "output": "RNA binding ; regulation of DNA-templated transcription" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MRVYNCHFCSSPVYPGKGIMFVRNDSKEFRFCRSKCHKNFKMKRNPRKLRWTKAFRKAAGKEMVVDSTLAFSARRDVPVRYNRDLVEKTLEAMEKVEEIRLKRERAFYKNRMRGNKAAQLEEDRKLVEAHPELLREREVELRRMQEAGEDDDDEDMSEMEVSEEEESEEEREKVEIALKSKSKRKMRA", - "output": "cytoplasm ; nucleolus ; ribosomal large subunit biogenesis" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MSQFSFTKMHGLGNSYIYVNMFEEQIPEEDLALVAEKVSNINTGIGADGMILICPSDVAPVKMRMFNNDGSEGKSCGNGLRCVAKYAYEHKLVEDTVFTIETLAGIVTAEVTVEEGKVTLAKIDMGAPRLTRAEIPMLGEGETPFIRENFLYNNHRYAFTAVSMGNPHAVIFVDDVEQAPLTTLGPVLETHEMFPERVNVEFIEILNEEEMNFRVWERGSGVTQACGTGACAAVVASILNGKMERGKEITVHLAGGDLMIAWTEEGNVLMKGPAEVICHGVYEYKIEA", - "output": "cytoplasm ; diaminopimelate epimerase activity ; lysine biosynthetic process via diaminopimelate" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MKSTFGLLALAAAAKLVSAHATVHAVWINDVDQGAGNSADGYIRTPPNNSPITDVTSADMTCNVNGKNSVAKTLSVKAGDKVTFEWHHDSRSASDDIIASSHMGPVMVYMAPTEKGTAGNGWVKIAEEGYSNGKWAVANLIANKGKHSITVPDVPAGEYLLRPEIIALHEGNRQGGAQFYMECVQVKVTSAGTKTLPAGVSIPGAYKATDPGVLFDMYNSFTSYPIPGPAVWDGSSSGSSGSSDSSPATTAPEASVTSAPTKQGSADTSASPTTFVTATKPTTTAAPAAPPASTGSNSGSGSSGSGSASGSVKIYQQCGGKNYSGATSCEAGLTCKEWNPYYHQCLKA", - "output": "extracellular region ; cellulase activity ; cellulose binding ; cellulose catabolic process" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MVPEPGPSANSTPAWGAGPPSAPGGSGWVAAALCVVIALTAAANSLLIALICTQPALRNTSNFFLVSLFTSDLMVGLVVMPPAMLNALYGRWVLARGLCLLWTAFDVMCCSASILNLCLISLDRYLLILSPLRYKLRMTPPRALALVLGAWSLAALASFLPLLLGWHELGHARPPVPGQCRLLASLPFVLVASGLTFFLPSGAICFTYCRILLAARKQAVQVASLTTGMASQASETLQVPRTPRPGVESADSRRLATKHSRKALKASLTLGILLGMFFVTWLPFFVANIVQAVCDCISPGLFDVLTWLGYCNSTMNPIIYPLFMRDFKRALGRFLPCPRCPRERQASLASPSLRTSHSGPRPGLSLQQVLPLPLPPDSDSDSDAGSGGSSGLRLTAQLLLPGEATRDPPLPTRAAAAVNFFNIDPAEPELRPHPLGIPTN", - "output": "cilium ; dendrite ; plasma membrane ; synapse ; G protein-coupled serotonin receptor activity ; neurotransmitter receptor activity ; cerebral cortex cell migration ; chemical synaptic transmission ; G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger ; positive regulation of TOR signaling" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MKSITINGSKRESVGKKATKALRNAGQVPCVLYGVEGDPLHFAAEEISFKNLVYTPDVHTVKIKLKSGESYDAILQDIQFHPLTDAILHIDFYQIFGEKPITMEIPIHTEGVARGVKNGGVLRYNLRRLKVRGLPADLPDYIVANVSKLKIGQKLYVTGVDSKDFVIQHPDNTVICQVRTSRNLVELEDEDEDEDEVAADEVPATEVDDQAAVKEGEGKE", - "output": "ribonucleoprotein complex ; ribosome ; 5S rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MATAALRQIWIPRFLPVPWFLCGSRRYASSSFKAADLQLEMTQEPHKKPDPSQPLLFGKTFTDHMLMVEWNQEKGWGQPRIQPFQNLTLHPACSALHYSLQLFEGMKAFKGGDQRVRLFRPWLNMERMLRSALRLCLPSFDKIELLECIRRLVEVDQDWVPGSMGTSLYVRPVLIGNEPSLGVGHPTRALLFVILSPVGAYFPGDALKPVSLLADPSFIRAWVGGVGNYKLGGNYGPTVLVQQEAQKKGCEQVLWLYGPDHELTEVGTMNIFVFWTYEDGVLELVTPPLDGIILPGIVRQSLLDLARTWGEFRVVERKITMKEFLRALKDGRVREVFGSGTACQVCPVHQILYQGKHFHIPTMENGPQLILRFHKELKAIQYGSKAHEWMLPV", - "output": "mitochondrion ; branched-chain-amino-acid transaminase activity ; L-isoleucine transaminase activity ; L-leucine transaminase activity ; L-leucine:2-oxoglutarate aminotransferase activity ; L-valine transaminase activity ; leucine biosynthetic process ; lipid metabolic process ; valine biosynthetic process" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MAKFLLLNGPNLNLLGTREPQIYGSQTLAQICDTLREQAKAHGHVLEDFQSNAEHELVERVHRASREGIDFILINPGAFTHTSIALRDALLGVAIPFIEVHLSNVHAREPFRHKSYLSDVARGVIMGLGPKGYALALDAAIHLTQKN", - "output": "3-dehydroquinate dehydratase activity ; amino acid biosynthetic process ; aromatic amino acid family biosynthetic process ; chorismate biosynthetic process" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MKSWSVNKIIMLISLFLLEVIDSQIISNNIINNFNTKQNSNNIKMTYGRFLEYLDMGWIKKVDFYDNGRIAIIEASSPELGDRLQKIRVEIPVGDSPLIVKLRTAKVDFTAHSTINSKGIFTQLSNIFIPLIIIIGLIFLFRRSTNFMSGPGQLMSFRKARAKVQTEINTDVVFDDVAGIDEVKEEFEEVVTFLRKPQRFLSVGAKIPKGVILIGPPGTGKTLLAKAIAGEAGVPFISISGSEFVEMFVGIGASRVRDLFKTAQQNAPCIVFIDEIDAVGRQRGAGIGGGNDEREQTLNQILTEMDGFKENTGIIVIAATNRVDVLDGALLRPGRFDRQVSINLPDIKGRLEILKVHAKNKKLDSNISLGLIAQRTPGFSGADLANLLNESAILTARRNKFAITMSEVNTAIDRLLAGLEGTSLTDTKNKRLIAYHEIGHAVIGTLLKYHDEVQKVTLIPRGQARGLTWFIPNDEQALISRGQLVARIIGTLGGRAAEEVVFGSSEITTGASNDLQQITNLTRQMVTRLGMSTVGPISLDANVEQVFIGRGIKNNNEFSASVANKIDDQVKIIIKHCYDQAVNIIKQNRFLIDQLVNTLIQEETISGNDFREQINNYTKLPKKLSTLSEKNNVNPKITESFVVF", - "output": "chloroplast thylakoid membrane ; ATP binding ; ATP hydrolysis activity ; ATP-dependent peptidase activity ; metalloendopeptidase activity ; zinc ion binding ; protein catabolic process ; proteolysis" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MTLGPLMIDLKGVTLDSEERAWLGHSWVGGVILFSRNYESPEQIAALIKAVHALKEPRLLVAVDHEGGRVQRFRDGFTLLPPASLLGKLYDRDQRQAQRLAMITGWLMAVELRAVGVDFSFSPVLDLDRGVSAVIGDRAFHGEPDAVIALARAYIRGMAWAGMAAVGKHFPGHGSVVADSHTALPVDKRSWRQIREGDLLPFEHLARAGLPAVMPAHVRYASVDSRPVGFSPFWLETVLRGQLGFQGAIISDDLSMAGAAEVGDMSARMQAALSAGCDMALVCNDPDGYALLLDELKGDPYPQTSPRLLRLYGRYPLTRSQLYHNPAWQRAVQMLAAYGEF", - "output": "cytoplasm ; beta-N-acetylhexosaminidase activity ; N-acetyl-beta-D-galactosaminidase activity ; carbohydrate metabolic process ; cell cycle ; cell division ; cell wall organization ; peptidoglycan biosynthetic process ; peptidoglycan turnover ; regulation of cell shape" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MSKQQKKEVEQRRCFGIISHPDAGKTTLTEKFLLFGGAIQLAGAVKARKAARHATSDWMSIERDRGISVTTSVMTFSYRDFFINLLDTPGHQDFSEDTYRVLTAVDSALMVIDSAKGVEAQTEKLMEVCRMRNTPIITFINKMDRDGMAPLDLLSDIEEKLQIECAPLTWPIGAGKGFAGVYNLYKKELQLFTAGGKTRQKDGIVIQDLDDPKLAELIGESKAEELREDIELLEGAANPFEMEHYLSGSQTPVFFGSAINNFGITELLDALVEMAPAPGLRPAESRDVSPLEEDFSGFTFKIQANMDPAHRDRIAFVRICSGKFNRGMKVMHHRIGKEMIISNATMFMAQDRANVEEAWPGDIIGVHNHGTIKIGDTFTIKEPLKFTGIPNFAPEHFRRVMLKDPMKAKQLNKGLTQLAEEGAVQVFRPLTSADNILGAVGVLQFDVTMARLKAEYNVDCIYEAIDYNTARWVECPDNKMLDEFRKANQANLALDGEGQLAYLAPSQWRLGFVQENWPDVVFHKTREYN", - "output": "cytoplasm ; GTP binding ; GTPase activity ; guanosine tetraphosphate binding ; translation release factor activity, codon specific ; regulation of translational termination" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "METIARHSQARSSAQKLRLVADLIRGKNIEHALNILTFCNKKASILVKKVLKSAISNAEHNHGSDINNLQVKKILIDEGPTMKRMMPRAKGRSDRILKRTSHITIVVSDSKVKDKKGRG", - "output": "large ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MTAHKPFSAVILAAGKGTRMRSDTHKILHALAGRPLLGWVLDSLAPLSPDHTVVVTGSGREQVENYLKQVDLPVTSVTQEEQLGTAHAVAQAKSALKDFKGDIVVLYGDVPLVQPKTIKALLERLHHEDKPTVAVLAFRPDDPRQYGRIVTDKTAHIQKMVEYKDASEEERAITLCNSGLLAIRAHDLWPLLSRVQNNNASGEYYLPDIVMLALSEGRQAVTVDAEAWEVSGVNNRAELASLESLWQNRKRQDVMKDGASLIAPETVWFSYDTEIGRDVIIEPQVYFGRNVKVANGVTIHSFSHIEGADIKENVEIGPFARLRPGAEIAEKAKIGNFVEIKKSKIEKGAKVNHLTYIGDATIGAGSNIGGGTITCNYDGFNKSRTEIGEKAFIGSNSALVAPVRIGAGAIIAAGSTITHNVPDDSLAIARSEQENKALWAKKFRQRKKKK", - "output": "cytoplasm ; glucosamine-1-phosphate N-acetyltransferase activity ; magnesium ion binding ; UDP-N-acetylglucosamine diphosphorylase activity ; cell morphogenesis ; cell wall organization ; lipid A biosynthetic process ; peptidoglycan biosynthetic process ; regulation of cell shape ; UDP-N-acetylglucosamine biosynthetic process" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQGRSKYGVKKPK", - "output": "chloroplast ; small ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "DTTPCGESCVWIPCVSSIVGCSCQNKVCYQN", - "output": "defense response" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MDTIFALATAQGKAGVAVIRLSGPRAYHTACLLAGPDLPSRGLSVRQLKDSQGARLDDGVVLTFAAPASFTGEDVAEFQIHGSLATTEAVLRCLGDLDGLRLAEPGEFTRRALENGKMSLPQVEGLADLIDAETEAQRKQAQAVLNGALGQLAEGWRAKLIRAAALLEAVIDFADEEVPTDVSPEVRALLAEVRADLEHEIAGVRIAERIRTGFEVAIIGPPNAGKSTLLNMLAGREAALTSEVAGTTRDVIEVRMDLGGLPVTLLDTAGLRETGDLVEGMGIALARRRADQADLRVFLTEDVDAMGVELQPDDLHVLPKADQRPDTANAISGVTGQGVDQLVQRISDVLKTRSSSAGIATRERHRVAMKTALDALDRTGTVLESGPDLYDIAAEELRTAIRALESLVGRIGVETLLDEIFASFCLGK", - "output": "cytoplasm ; GTP binding ; GTPase activity ; metal ion binding ; tRNA modification" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MSSASAPGPAPACLTLWDEEDFQGRRCRLLSDCANVGERGGLRRVRSVKVENGAWVAFEYPDFQGQQFILEKGDYPRWSAWSGSSGHHSNQLLSFRPVLCANHSDSRVTLFEGENFQGCKFELSDDYPSLPSMGWASKEVGSLKVSSGAWVAYQYPGYRGYQYVLERDRHSGEFRNYSEFGTQAHTGQLQSIRRVQH", - "output": "identical protein binding ; structural constituent of eye lens ; lens development in camera-type eye" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MTAQFPPPVPDTEQRLLSHEELEAALRDIGARRYHNLHPFHRLLHDGKLSKDQVRAWALNRYYYQAMIPVKDAALLARLPDAQLRRIWRQRIVDHDGDHEGDGGIERWLKLAEGVGFTRDYVLSTKGILSATRFSVDAYVHFVSERSLLEAIASSLTEMFSPTIISERVAGMLKNYDFITKDTLAYFDKRLTQAPRDADFALDYVKRHATTPEMQRAAIDALTFKCNVLWTQLDALYFAYVAPGMVPPDAWQPGEGLVAETNSAEDSPAAAASPAATTAEPTAFSGSDVPRLPRGVRLRFDEVRNKHVLLAPERTFDLDDNAVAVLKLVDGRNTVSQIAQILGQTYDADPAIIEADILPMLAGLAQKRVLER", - "output": "pyrroloquinoline-quinone synthase activity ; quinone binding ; pyrroloquinoline quinone biosynthetic process ; thiamine-containing compound metabolic process" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MKFTKMHGLGNSYIYVDCFKELLKEEELPALAVAVADKNKGIGSDGMILICPSDRAPVKMRVFNNDGSEAKNCGNGLRCVAKFAFEHGYVKETSFDVETLGGLVKATVHPNDNGLVDTVTVNMGEPRLGRAQIPMLGEEAAEVVAEPFTIGEKEYRLTAVSMGNPHAIMFIDTIEDAPVEQVGPLLEKHEAFPDWVNVEFVQVVSPTEIHFRVWERGSGITQACGTGACAAVVASVLNGFTQKGQEVTVHLLGGDLTISWLENGDVLMTGAAETICEGTYVKGLSY", - "output": "cytoplasm ; diaminopimelate epimerase activity ; lysine biosynthetic process via diaminopimelate" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MFKKFSKEDIHTRTKVKTSVQRSLKSKLVEQFPKLEEVIDELLPKKTELQIIKCSDKIQLYAVGDEVLFFQKFEELIPTLRFVHKYPEAFPTIQIDRGAIKFVLSGANIMCPGLTSSGAALPEAPGLAQDSIVVVNAENKENALAIGKLLMSTEDIKSINKGHGVETIHHLGDCLWNFSLV", - "output": "cytosol ; RNA binding ; formation of translation preinitiation complex ; ribosome biogenesis" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQPPGQHGARKPRLSDYGVQLREKQKVRRIYGVLERQFRNYYKEAARLKGNTGANLLQLLEGRLDNVVYRMGFGATRAESRQLVSHKAIMVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAVKMEGVFKRIPERTDLSADINEHLIVELYSK", - "output": "small ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MNTLNAPRNPTRHPAMTADTLVDAPALPHQNGSTEEKLKERGSFGKLYTYKRSPRALGIQAVAKSIGLELEQVELQPANGVPDFYWNLNPLGKTPTFVGADGLVLTECMAIALHVTNEDSTTTLLGSSSLDFVQIIRWISFTNTDVVTRMASWVRPLIGYTPYSKEEVLKAQQQTTQAIGVFEDSLRDRKYLVGDRLTLADIMCVSLVSFGFAQIFDKEWREAFPYFSGWYMMVMHLPIMKAVVEEVPFVEEGLPNAPPTEPFRAP", - "output": "cytoplasm ; nucleus ; transferase activity ; terpenoid biosynthetic process" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MSEAKRRAAEKAIEYVENDMIIGVGTGSTVAYFIDALGHTPKRIKGAVSSSEQSTAHLKQHGIEVLELNHTGTLPLYVDGADECDPYKRLIKGGGASLTREKIIAEASKQFICIIDPNKQVATLGKFPLPIEVIPMARSLVARQIMARTDGQPVWREGVITDNGNVILDVHHLCITDPVKLEQELNQIPGVVCVGLFARRCADLVIIGSEPPHIL", - "output": "ribose-5-phosphate isomerase activity ; pentose-phosphate shunt, non-oxidative branch" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MAVERTFVAIKPDGVQRGLVGEILGRFERKGFKLVGLKQLAPSRELAGEHYGVHRERPFFAGLVDFITSGPVVAMVWEGDGVIASARKLIGATKPLEAEPGTIRGDLAVNIGRNVIHGSDGPDTAQFEINLWFSPEELNAWTPSDQSWRVES", - "output": "cytoplasm ; ATP binding ; metal ion binding ; nucleoside diphosphate kinase activity ; CTP biosynthetic process ; GTP biosynthetic process ; phosphorylation ; UTP biosynthetic process" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MGELLSFQIFINEPVELLNLSLNAKAVLPEAAVLMAMLGTLLVDLAGEKISARWSPPICYAGLGSALILLAMQWDGEIQESFLGAFIADNLAIAFRGVIVLSTLISLLISWRYADQNGSPIGEFAAILLAATLGAMLLCGSTDLVSVFVSLETLSVASYLLSGYLKRDSRSSEAALKYLLVGSAAAAVFLYGASLLYGISGSTNLKEIGTTLLSAPTPLSALALVFVLSTVAFKIAAVPFHQWTPDVYEGSPTPVVAFLSVGSKAAGFALAIRILVGCFSAFDTQWKLLFTVLAVLSMSLGNVVALAQKSMKRMLAYSSIGQAGFVMIGLVCGTEDGFAAMVLYMAAYLFMNLGAFACIILFSIRTGSDQISDYAGLYQKDPLITLGLSLCLLSLGGIPPMLGFFGKIYLFFAGWADGQYLLVTVGLVTSVISIYYYISVIKMMVVTEPKEASDVVKAYPSIEWSIPGMSSLKVALIFCVLVTAIGGIISNPLFNFADSAVNGTPLLREAITLASKSSIG", - "output": "plasma membrane-derived thylakoid membrane ; NADH dehydrogenase (ubiquinone) activity ; quinone binding ; ATP synthesis coupled electron transport ; photosynthesis, light reaction" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MTKDLNTLVSELPEIYQTIFGHPEWDGDAARDCNQRLDLITEQYDNLSRALGRPLNVLDLGCAQGFFSLSLASKGATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGLSVFHHIVHLHGIDEVKRLLSRLADVTQAVILELAVKEEPLYWGVSQPDDPRELIEQCAFYRLIGEFDTHLSPVPRPMYLVSNHRVLINDFNQPFQHWQNQPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKHELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVMEKLPGRLLSDMLAAGEEIDREKILGSLLRSLAALEKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCSWPTNLVQSFFVFVNELFAENKSWNGFWRSAPVHPFNLPQPWSNWLYAVWQEPVERWNFALLLALFEKKAKLPSAEQQRGATEQWIIAQETVLLELQSRGRNESAGSEALRGQIHTLEQQMAQLQSAQDAFVEKAQQPVEVSHELTWLGENMEQLAALLQTAQAHAQADVQPELPPETAELLQRLEAANREIHHLSNENQQLRQEIEKIHRSRSWRMTKGYRYLGLQIHLLRQYGFVQRCKHFIKRVLRFVFSFMRKHPQVKHTAVNGLHKLGLYQPAYRLYRRMNPLPHSQYQADAQILSQTELQVMHPELLPPEVYEIYLKLTKNK", - "output": "plasma membrane ; ATP binding ; methyltransferase activity ; protein kinase activity ; methylation ; O antigen biosynthetic process ; protein phosphorylation" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MAEDMETKIKNYKTAPFDSRFPNQNQTRNCWQNYLDFHRCQKAMTAKGGDISVCEWYQRVYQSLCPTSWVTDWDEQRAEGTFPGKI", - "output": "mitochondrial inner membrane ; mitochondrial respiratory chain complex IV ; mitochondrion ; respiratory chain complex IV ; cytochrome-c oxidase activity ; cellular respiration ; mitochondrial electron transport, cytochrome c to oxygen ; substantia nigra development" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MANIKSAIKRAELNVKANEKNSAQKSAMRTAIKAFEANPSEELFRAASSSIDKAESKGLIHKNKASRDKARLAAKLG", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MEWIIAGLLAVIAFVGGIFYRKSIAEGKIGSAEDRARQIVDDAVKEAEAKRREAVLAAKDEVHQMRIEAERENRERRNELQRLERRLLQKEESLDRKMESMERKEDNLQRREDEIEKLRAGLAETLQKQVAELERLSGLTSEEARTLLLSNIEDEVKHEAAMMIKTIENQAKEEAEKRAREIISLAIQRCAADHVAESTVSVVALPNDEMKGRIIGREGRNIRTLETLTGIDLIIDDTPEAVILSGFDPIRREVARIALEKLILDGRIHPARIEEMVEKAQKEVETRIREEGEQATFETGIHGLHPELIKLLGRLRWRTSYGQNVLKHSIEVAHLAGLMAAELGADPILARRAGLLHDIGKAVDHEMEGNHVSIGIDLAKKYRESREVIHCIAAHHGDEEPRTIEAVLVAAADAVSAARPGARRETLESYIKRLQKLEEIADSFEGVEKAFAIQAGREIRIMVKPDKVDDAESLRVAREIVKRIESELEYPGQIKVVVIRETRAVDYAK", - "output": "plasma membrane ; RNA binding ; RNA endonuclease activity ; mRNA catabolic process" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MAGATSSIIRENDFEDELAESMQSYNRETADKLALTRTESVKPEPEITAPPHSRFSRSFKTVLIAQCAFTGFFSTIAGAIYYPVLSVIERKFDIDEELVNVTVVVYFVFQGLAPTFMGGFADSLGRRPVVLVAIVIYFGACIGLACAQTYAQIIVLRCLQAAGISPVIAINSGIMGDVTTRAERGGYVGYVAGFQVLGSAFGALIGAGLSSRWGWRAIFWFLAIGSGICFLASFLILPETKRNISGNGSVTPKSYLNRAPILVLPTVRKSLHLDNPDYETLELPTQLNLLAPFKILKAYEICILMLVAGLQFAMYTTHLTALSTALSKQYHLTVAKVGLCYLPSGICTLCSIVIAGRYLNWNYRRRLKYYQNWLGKKRSKLLEEHDNDLNLVQRIIENDPKYTFNIFKARLQPAFVTLLLSSSGFCAYGWCITVKAPLAAVLCMSGFASLFSNCILTFSTTLIVDLFPTKTSTATGCLNLFRCILSAVFIAALSKMVEKMKFGGVFTFLGALTSSSSILLFILLRKGKELAFKRKKQELGVN", - "output": "cell periphery ; plasma membrane ; monoatomic cation transmembrane transporter activity ; transmembrane transporter activity ; xenobiotic transmembrane transporter activity ; copper ion export ; potassium ion import across plasma membrane ; transmembrane transport" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MVRRRGLSGLLEADIYGITAWEYSLGRSNIEVVAQMIEAGIKVIQYREKERPARQKYEECLKIREMTREAGVTFIVNDHVDLALLVDADGVHLGQDDLPADRVRELVGDKMIIGLSTHSPAQARAAEKMGVDYIGVGPIFATKTKKDVCDPVGLEYLEFVVKNISLPFVAIGGIKEHNIAEVSSRGAKCIALVTEIVGAEDIKAKVRALRAIISRKED", - "output": "magnesium ion binding ; thiamine-phosphate diphosphorylase activity ; thiamine biosynthetic process ; thiamine diphosphate biosynthetic process" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MPPKEAQASQKLFGTDGVRGKANVYPMTAEVAMQLGRALAFLIRNGPHRHRVIVGKDTRLSGYMLEQALASGLTSMGVDVELVGPLPTPGISNITTSMRADAGAVISASHNPYEDNGIKFFWRDGFKLPDETEGKIEELVSSGSIDSIRPTATKIGRAFRMEDARGRYIVFLKATFPRELTLEGMTIVVDCANGAAYKTAPAVLEELGAKVIALGVSPDGKNINHKCGALYPENLAKTVVKHGAHLGIALDGDADRLIVVDEKGKVVDGDAIMAICTGELVARKQLKKKMLVSTVMSNIGLERAVARWGVKVARTRVGDRYVVDEMRRNGYNLGGEQSGHLIFLDHTTTGDGTLAALQLLAVMCRAGKPLSELASIFEPVPQTLVNVVVKQKKELGELPTVMKVIKSVEQRLGNTGRVLVRFSGTEPKARVLIEGEDAARNQAYAKEIADALSKALSV", - "output": "magnesium ion binding ; phosphoglucosamine mutase activity ; carbohydrate metabolic process" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MENRWQVMVVWQVDRMKIRKWNSLVKHHMYVSKKAKGWYYRHHYETHHPKISSEVHIPVGQARLVTVTYWGLTTGEQSWHLGHGVSIEWRLRKYKTQVDPEMADKLIHLHYFDCFTASAIRQAVLGRPVLPRCEYPAGHKQVGTLQYLALTAWVGAKKRKPPLPSVTKLTEDRWNEHQKMQGHRGNPIMNGH", - "output": "host cell cytoplasm ; host cell plasma membrane ; membrane ; virion component ; RNA binding ; viral life cycle" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MTKITLFPHNFRIQKQETTPLKEKSTEKNSLAKSILAVKNHFIKLNSKLSERFISHKNTESSATHFHRGSASEGRAVLTNKVVKNFMLQTLHDIDIRGSASKDPAYASQTREAILSAVYSKYKDQYCNLLISKGIDIAPFLKEIGEAAQNAGLPGATKNDVFTPSGAGANPFITPLITSAYSKYPHMFTSQHQKASFNIYAEKIIMTEVVPLFNECAMPTPQQFQQILENIANKYIPNTP", - "output": "extracellular region ; GTPase activator activity ; guanyl-nucleotide exchange factor activity ; actin cytoskeleton reorganization ; activation of GTPase activity" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MFPMVTEFMNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLITSERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYELSTYDRHELNYNQIALGRLPMSIIDDYTIRTILNLPEIKN", - "output": "chloroplast thylakoid membrane ; 4 iron, 4 sulfur cluster binding ; iron ion binding ; NADH dehydrogenase (ubiquinone) activity ; quinone binding ; photosynthesis, light reaction" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MVAEIFNHDICENNVVISPRSETAQDNEGLFGRIGTLETRLARNEREIDAAQSVRYRVFVEEMKARLPAEAMRRKRDFDAWDSVCDHLLVLDKSIEGDSEDQIVGTYRLLRQETALANNGFYSASEFDIAGLVARHPGKRFMELGRSCVLPEYRTKRTVELLWQGNWAYAVKHRMDAMIGCASFPGVQPEAHALALSFLHHNCLAKGEWEAVALPELYHEMDLVPVEALNTRKALNAMPPLIKGYMRLGAMFGSGAVVDHAFNTTDVLVVLPVSSIAGRYISYYGGEAERING", - "output": "ornithine-acyl N-acyltransferase activity ; lipid metabolic process" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MVANGHFAGVGDVLDAKNYEHGVQVIDEEKEFNPNLSNYLSYENVTPAGFNYHLISVFGSQSTGKSTLLNSLFGTHFSVMSETERRQTTKGIWLSKNKRLKSDKGQDNQTKMADNILVMDVEGTDGRERGEDQDFERKSALFALATSEVLIVNIWEHQVGLYQGANMGLLKTVFEVNLELFLKDKRSNPRSLLFFVIRDFLGTTPLQNLQNTLLQDLNRIWNSLSKPAGLENSSITDYFDFAFAGLPHKNFQPEKFVDEVRKLSTRFCDGHRDPNKTDAKGTSSIEGGIFLPEYHRRIPADGFAVYAEGIWDQIVNNKDLDLPTQQELLAQFRCDEISREVLVAFDEAISPFEAKQAEAVQAGNPQVLGGLGSAMCNARMKSVKNFDTEASRYHKRVYQMKKSELQDKIDSRLKALFLGQLSAAHRSGIQEFTESVTAAVKAGQKRGASYDFAEIVTKERKLAIEKFEKEARAAVVEDTQWSNYQQELSLYQKDLENIGGQLRRDEMRRLATRVGRWVRSRLGESIDLEFNAIGSGRGGSGAPEFGDKPSEKSLWDRVWTLFVDTVLDAERRFTERASSFDASIDEVDVGLWRLRRKSWGVLRAKIEEEMMEGNILLKLRENFEDKFRYDDAGVPRIWRPNDDIESIYTRARESTLTLIPLLSRFRLAETNAPPPLDKWIGHTPSSATPADEEDLTPIGGVDEDEGKSLEEEMTMIGEAKKQDLTVRFKKTADGVYVEAKRSAIGGITQVPLYFYGLLLALGWNEIVAVLRNPAYFLLLFVCAVTAYVTYQLNLWGPIIKMTEAASQQALMEGKRRLREFLEASDTGLQAMAMSEGRNAEEYDMSNMKNRKSAGGFQNNRSHIDDADDDDDF", - "output": "endoplasmic reticulum membrane ; GTP binding ; GTPase activity ; endoplasmic reticulum organization" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MSDIDFGYTKDHARKGANAKLPEIQCWENQYKRDYDIRIELPEFTSVCPKTGLPDFGVITIDYIPDRLCLELKSLKYYLLEYRDMGIFMENIANKILDDVVKACKPKKAVVTGDFTPRGGLRSVIVAKYEKK", - "output": "cytoplasm ; preQ1 synthase activity ; queuosine biosynthetic process" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MKFIDEAKIEVAAGKGGNGATSFRREKFVPRGGPDGGDGGKGGSVWAEADENTNTLVEYRFVKRYQAKNGEKGHGSDRYGAGADDIVLKMPVGTLIRDLDTGETVADLTYHGQRVCLAKGGKGGLGNIHFKSSVNRAPKQSTPGEEGEARSLQLELKVLADVGLLGMPNAGKSTLITAVSAARPKIANYPFTTLHPNLGVVRIDENHSFVMADIPGLIEGAAEGAGLGHRFLKHLSRTGLLLHVVDLAPFDETVNPAEEALAIINELRKYDEELYGKPRWLVLNKLDMLDEEEAQTRTAAFLEAVGWDYPKPDDRFQFDMETPRLFQISALTHQGTQELVHQINQYLTEKKRIEAEKAEAEKAAANVEIIEQQPKTDTGVFKPE", - "output": "cytoplasm ; GTP binding ; GTPase activity ; magnesium ion binding ; ribosome biogenesis" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MPRNPNSFRLTARNIFLTYPRCDVPKEEVLEMLLHLSWSVVKPNYVRVAREEHSDGSPHLHCLIQLSGKSNIKDAGFFDLTHPRRSARFHPNIQAAKDTNAVKNYITKEGDYCESGQYKVSGGSKSNKDDVYHNAVNAGSAGEALDIIKAGDPKTFIVNYHNLLANVERLFQKPPEPWVPPFELSSFTSVPEELQDWADDYFNECSAAARPTSIIIEGGSRTGKTMWARSLGPHNYLSGHLDFNSRVFSNDVKYNVIDDVAPHYLKLKHWKELIGAQRDWQSNCKYGKPVQIKGGIPSIVLCNPGEGSSYKDFLDKAENSALREWTEKNAKFIFLEGPLYQSTAQDC", - "output": "host cell nucleus ; ATP binding ; DNA binding ; endodeoxyribonuclease activity, producing 5'-phosphomonoesters ; helicase activity ; metal ion binding ; nucleotidyltransferase activity ; structural molecule activity ; DNA replication" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MAKEDVIEIEGKVVETMPNAMFTVELENGHQILATVSGKIRKNYIRILVGDRVTVEMSPYDLTRGRITYRFK", - "output": "cytoplasm ; ribosome binding ; rRNA binding ; translation initiation factor activity" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MRGFRPLLSLLLPLSACFPLLDRRGPTDIGDIGARMNWAQLAEGHPPNSVQNPQPQALLVVAREQQASHREHTGFRLGRQDGSSEAAGFLPADSEKASGPLGTLAEELSSYSRRKGGFSFRFGR", - "output": "extracellular region ; neuropeptide hormone activity ; orexigenic neuropeptide QRFP receptor binding ; grooming behavior ; locomotory behavior ; neuropeptide signaling pathway ; positive regulation of blood pressure ; regulation of feeding behavior" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MLSATPLYGNVHSWMNSERVRMCGASEDRKILVNDGDASKARLELREENPLNHNVVDASTAHRIDGLAALSMDRTGLIREGLRVPGNIVYSSLCGLGSEKGREAATSTLGGLGFSSERNPEMQFKPNTPETVEASAVSGKPPNGFSAIYKTPPGIQKSAVATAEALGLDRPASDKQSPLNINGASYLRLPWVNPYMEGATPAIYPFLDSPNKYSLNMYKALLPQQSYSLAQPLYSPVCTNGERFLYLPPPHYVGPHIPSSLASPMRLSTPSASPAIPPLVHCADKSLPWKMGVSPGNPVDSHAYPHIQNSKQPRVPSAKAVTSGLPGDTALLLPPSPRPSPRVHLPTQPAADTYSEFHKHYARISTSPSVALSKPYMTVSSEFPAARLSNGKYPKAPEGGEGAQPVPGHARKTAVQDRKDGSSPPLLEKQTVTKDVTDKPLDLSSKVVDVDASKADHMKKMAPTVLVHSRAGSGLVLSGSEIPKETLSPPGNGCAIYRSEIISTAPSSWVVPGPSPNEENNGKSMSLKNKALDWAIPQQRSSSCPRMGGTDAVITNVSGSVSSAGRPASASPAPNANADGTKTSRSSVETTPSVIQHVGQPPATPAKHSSSTSSKGAKASNPEPSFKANENGLPPSSIFLSPNEAFRSPPIPYPRSYLPYPAPEGIAVSPLSLHGKGPVYPHPVLLPNGSLFPGHLAPKPGLPYGLPTGRPEFVTYQDALGLGMVHPMLIPHTPIEITKEEKPERRSRSHERARYEDPTLRNRFSEILETSSTKLHPDVPTDKNLKPNPNWNQGKTVVKSDKLVYVDLLREEPDAKTDTNVSKPSFAAESVGQSAEPPKPSVEPALQQHRDFIALREELGRISDFHETYTFKQPVFTVSKDSVLAGTNKENLGLPVSTPFLEPPLGSDGPAVTFGKTQEDPKPFCVGSAPPSVDVTPTYTKDGADEAESNDGKVLKPKPSKLAKRIANSAGYVGDRFKCVTTELYADSSQLSREQRALQMEGLQEDSILCLPAAYCERAMMRFSELEMKEREGGHPATKDSEMCKFSPADWERLKGNQDKKPKSVTLEEAIAEQNESERCEYSVGNKHRDPFEAPEDKDLPVEKYFVERQPVSEPPADQVASDMPHSPTLRVDRKRKVSGDSSHTETTAEEVPEDPLLKAKRRRVSKDDWPEREMTNSSSNHLEDPHYSELTNLKVCIELTGLHPKKQRHLLHLRERWEQQVSAADGKPGRQSRKEVTQATQPEAIPQGTNITEEKPGRKRAEAKGNRSWSEESLKPSDNEQGLPVFSGSPPMKSLSSTSAGGKKQAQPSCAPASRPPAKQQKIKENQKTDVLCADEEEDCQAASLLQKYTDNSEKPSGKRLCKTKHLIPQESRRGLPLTGEYYVENADGKVTVRRFRKRPEPSSDYDLSPAKQEPKPFDRLQQLLPASQSTQLPCSSSPQETTQSRPMPPEARRLIVNKNAGETLLQRAARLGYEEVVLYCLENKICDVNHRDNAGYCALHEACARGWLNIVRHLLEYGADVNCSAQDGTRPLHDAVENDHLEIVRLLLSYGADPTLATYSGRTIMKMTHSELMEKFLTDYLNDLQGRNDDDASGTWDFYGSSVCEPDDESGYDVLANPPGPEDQDDDDDAYSDVFEFEFSETPLLPCYNIQVSVAQGPRNWLLLSDVLKKLKMSSRIFRCNFPNVEIVTIAEAEFYRQVSASLLFSCSKDLEAFNPESKELLDLVEFTNEIQTLLGSSVEWLHPSDLASDNYW", - "output": "BCOR complex ; nucleoplasm ; nucleus ; DNA-binding transcription factor binding ; heat shock protein binding ; histone deacetylase binding ; RNA polymerase II transcription regulatory region sequence-specific DNA binding ; transcription cis-regulatory region binding ; transcription corepressor activity ; blastocyst hatching ; chromatin remodeling ; heart development ; negative regulation of bone mineralization ; negative regulation of DNA-templated transcription ; negative regulation of tooth mineralization ; negative regulation of transcription by RNA polymerase II ; odontogenesis ; roof of mouth development ; specification of axis polarity" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MKSFSLLASAGLATLASLPLTMAGVITPSYFDKHPLSRRQLSDAQVQRELGPQLSRGATIIGPGGPGWDDAIERFDNESRPTIRLVVVPAVESDIATVVKLANRFGIPFLVKNRGHALTNTIGRFRGIQIDMSRLTTITIQPGEPAESAWFQGGAWDKQAIEYLWDRGYVTVTGSCDCVGMMGPGLGGGHGRYQGLYGLISDNLINMNVVLADGSAVRVNATSNPDLWWGMQGAGHNLGIVTSFQSKIYPRKIDTWHYHSYTYTQDKLEAVFGALNTFHGNGDGSTPVLMGLNTGGFYIDPSVSQTEPVVSWVFGYAGPASEAEALLEPFSRLGPAAEQSGDVPYPGVATAMGTGQDQPLCQPGDAHVQVTSQFNVYNATAERALYQLFNRTIAAHPQLADSVAFHEGYSTAAVDRADPSASAVAFRDRKLLMFFDARLKPADAADPEVLGMAREFGRQVRRIWNEGAPDLKPATYVNYAAGDEPLESMYGYDAARLRRLRNIKRKYDPHGRFVYYNPIA", - "output": "FAD binding ; oxidoreductase activity ; metabolic process" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MEKSITNSPVLSILSYCAASILMTVTNKYVLSGTSFNLNLALLAVQSIVCLTAISIGKSFGLCKFRSFNADEAKKWFPIALLLVVMIYTSSKALQFLSIPVYTIFKNLTIILIAYGEVLWFGGSVTSMALASFVLMVLSSVIAAWSDISGAIAVSGSATTTVTALNIGYFWMMSNCFASAAFVLYMRKRIKLTNFGDFDTTFYNNLLSIPVLLIASLLFEDWSPANLAVNFPPESRNLIFFSMVVSGLMSIGISYCSAWCVRVTSSTTYSMVGALNKLPLALSGIVFFGTPATFSSVSAIFVGFVAGIVYAVAQIQKKKAEAALPK", - "output": "cytoplasmic vesicle membrane ; endoplasmic reticulum membrane ; Golgi apparatus ; Golgi membrane ; antiporter activity ; GDP-mannose transmembrane transporter activity ; carbohydrate transport" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MRKVIICSPRGFCAGVIRAVQTVERALEKWGAPIYVKHEIVHNRHVVDKLRAKGAIFIEDLQEVPCNSRVIYSAHGVPPSVREEAKERGLITIDATCGLVTKIHSAVKMYARRGYLIILIGKRKHVEVIGICGEAPDKITVVENIAEVEALTFSTKDLLFYVTQTTLSMDDSADMIAALKARYPQIITLPSSSICYATQNRQSALRNILPKVEFVYVIGDPKSSNSNQLKAVAARRGVVARLVNNPEEITDEILQYSGNIGVTAGASTPEDVVQACLTKLQKLIPTLVVETDLFVEEDTIFQLPKELQ", - "output": "4 iron, 4 sulfur cluster binding ; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity ; metal ion binding ; dimethylallyl diphosphate biosynthetic process ; isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway ; terpenoid biosynthetic process" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MLLYRGAPAGPGTPGGGLARAGSVPQAFRIRLSTMSPRYLQSNSSSHTRPFSAIAELLDNAVDPDVSARTVFIDVEEVKKKPCLTFTDDGCGMTPHKLHRMLSFGFTDKVIKKSQRPIGVFGNGFKSGSMRLGKDALVFTKNGNTLAVGLLSQTYLECIQAQAVIVPIVPFSQQNKKMIVTEDSLPSLEAILNYSIFNCEKDLLSQFDAIPGKKGTRVLIWNIRRNKDGKSELDFDTDQYDILVSDFDAEEKEIGGVTSELPETEYSLRAFCSILYMKPRMKIFLRQKKVTTQMIAKSLANVEYDIYKPTSTNKQVRITFGFSCKYHNQFGVMMYHNNRLIKAFEKAGCQLKPTCGEGVGVIGVIECNFLKPAYNKQDFEYTKEYRLTINALARKLNAYWKEKISQENFEPLPTSRRIPDQTWVQCDECLKWRRLPGMVDPSTLPARWFCYYNPHPKFKRCSVPEEQERIDEDLHRSKAKQQVEAAEKKQKPMESDKYQVFSNPPKTPPLQDMAELNDKTIGYEQINSPSLLPSVREESRSPPRLKSLDSSAFQISRKYKLILGEEPVEKRRKIQTEMPLSPIDYSMSGFYRRVEAATAYPEGENSPDKCSSERSTPPHLIPEYPESNKHTEENREAPALCPGSQDQDQGFLLPEELEDQMPKLVAEESNRSSENIDKDMNKGPFVAVVGVAKGVADSGAPIQLVPFNREEFVGKRKRAESWKRANPYSSAAPAATAGKGKDCQDSRSRNMPKIKTPKESEELKRTTEKLERVLAERNLFQQKVEELEQEKNHWHSEYKKAQHELVTYSTQETEGIYWSKKHMGYRQAEFQILKAELERTKEEKQELKEKLKETESHLEVLQKAQVSFRNPEGDDLERALARLTRLRVHVSYLLTSVLPHLELREIGYDSEQVDGILYTVLEANHILD", - "output": "nucleoplasm ; nucleus ; ATP hydrolysis activity ; methylated histone binding ; zinc ion binding" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MSSYSYTVAETQTFSVTHARHMAAKVATDLRRMQRFYGYPSDADIEAYEEELVVFLKAGYLGEVSYGFQKNNNWIEPTLRYTAGDLLGSGTDDDPGKIRPGKDVSGASFYSFMTYSSKYLNATQSEKDTALKDLPFKRVGAQSPGINGYLENDKTYSAGGRSLTRTSVRNFV", - "output": "defense response to virus" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MSMFLDTAKISVQAGRGGDGMVAFRREKYVPNGGPWGGDGGKGGSVIFRVDEGLRTLMDFRYNRKFKAKSGEKGMTKGMHGRGAEDLIVFVPQGTTVRDAETGKVITDLVEHGQEVVIAKGGRGGRGNIRFATPRNPAPEIAENGEPGEERQLELELKILADVGLVGFPSVGKSTLLSVVSSAKPKIGAYHFTTIVPNLGMVRTKSGDSFAMADLPGLIEGASQGVGLGTQFLRHIERTRVILHVIDMSASEGRDPYEDYVSINNELETYNLRLMERPQIIVANKMDMPEAQDNLKAFKKKLATQYDEFNDLPMIFSISSLAHQGLENLLEATAELLAKTDEFLLYDESDLVDEEAYYGFAEAEKEFEITRDDDATWVLSGEKLERLFVMTNMERDESIMKFARQLRGMGVDEALRERGAKDGDLVRIGKFEFEFVD", - "output": "cytoplasm ; GTP binding ; GTPase activity ; magnesium ion binding ; ribosome biogenesis" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MRDLKTYLSVAPVLSTLWFGALAGLLIEINRFFPDALTFPFF", - "output": "chloroplast thylakoid membrane ; photosystem I ; photosynthesis" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MRARRGLLRLPRRSLLAALFFFSLSSSLLYFVYVAPGIVNTYLFMMQAQGILIRDNVRTIGAQVYEQVLRSAYAKRNSSVNDSDYPLDLNHSETFLQTTTFLPEDFTYFANHTCPERLPSMKGPIDINMSEIGMDYIHELFSKDPTIKLGGHWKPSDCMPRWKVAILIPFRNRHEHLPVLFRHLLPMLQRQRLQFAFYVVEQVGTQPFNRAMLFNVGFQEAMKDLDWDCLIFHDVDHIPESDRNYYGCGQMPRHFATKLDKYMYLLPYTEFFGGVSGLTVEQFRKINGFPNAFWGWGGEDDDLWNRVQNAGYSVSRPEGDTGKYKSIPHHHRGEVQFLGRYALLRKSKERQGLDGLNNLNYFANITYDALYKNITVNLTPELAQVNEY", - "output": "Golgi cisterna membrane ; Golgi membrane ; galactosyltransferase activity ; metal ion binding ; N-acetyllactosamine synthase activity ; UDP-galactose:glucosylceramide beta-1,4-galactosyltransferase activity ; carbohydrate metabolic process ; central nervous system myelination ; central nervous system neuron axonogenesis ; ganglioside biosynthetic process via lactosylceramide ; glycoprotein biosynthetic process ; neuron maturation ; O-glycan processing ; poly-N-acetyllactosamine biosynthetic process ; positive regulation of embryonic development ; protein glycosylation ; regulation of protein stability" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MRPAGRSNNQVRPVTLTRNYTKHAEGSVLVEFGDTKVLCTASIEEGVPRFLKGQGQGWITAEYGMLPRSTHTRNAREAAKGKQGGRTMEIQRLIARALRAAVDLKALGEFTITLDCDVLQADGGTRTASITGACMALADALQKLVENGKLKTNPMKGMVAAVSVGIVNGEAVCDLEYVEDSAAETDMNVVMTEDGRIIEVQGTAEGEPFTHEELLTLLALARGGIESIVATQKAALAN", - "output": "3'-5'-RNA exonuclease activity ; phosphate-dependent exonuclease activity ; tRNA binding ; rRNA catabolic process ; rRNA processing ; tRNA processing" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MALSDSIGDFLARIRNAQLAMHKTTRVLFSKVNSSILKILKDEGYILDYQKEVVGNIPSFVVKLKYYERSPVISDIVRVSKPGCRCYSKYKDISKAYNGLGIFIISTSKGVMTDYDAHKLKFGGEILCRVF", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MAQIDFRKKINWHRRYRSPQGVKTEHEILRIFESDRGRIINSPAIRRLQQKTQVFPLERNAAVRTRLTHSMEVQQVGRYIAKEILSRLKELKLLEAYGLDELTGPFESIVEMSCLMHDIGNPPFGHFGEAAINDWFRQRLYPEDAESQPLTDDRCSVAALRLRDGEEPLNELRRKIRQDLCHFEGNAQGIRLVHTLMRMNLTWAQVGGILKYTRPAWWRGETPETHHYLMKKPGYYLSEEAYIARLRKELNLALYSRFPLTWIMEAADDISYCVADLEDAVEKRIFTVEQLYHHLHEAWGQHEKGSLFSLVVENAWEKSRSNSLSRSTEDQFFMYLRVNTLNKLVPYAAQRFIDNLPAIFAGTFNHALLEDASECSDLLKLYKNVAVKHVFSHPDVEQLELQGYRVISGLLEIYRPLLSLSLSDFTELVEKERVKRFPIESRLFHKLSTRHRLAYVEAVSKLPSDSPEFPLWEYYYRCRLLQDYISGMTDLYAWDEYRRLMAVEQ", - "output": "dGTPase activity ; magnesium ion binding ; dGTP catabolic process" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MMKGGMAGLMKQAQQMQEKMAKMQEELANAEVTGKAGGDLVTVVMTGRHDVKKVSIDPSVLPGLDEDDREVVEDLVAAAVNAAVRQIEANSQAKMGSMTAGMNLPAGMKLPF", - "output": "bacterial nucleoid ; cytoplasm ; DNA binding" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MQIIEIREPEQADFKQERQIAVGIDFGTTNSLIAIAANRQVKVIKSIDDKELIPTTIDFTSNNFTIGNNKGLRSIKRLFGKTLKEILNTPALFSLVKDYLDVNSSELKLNFANKQLRVPEIAAEIFIYLKNQAEEQLKTNLTKAVITVPAHFNDAARGEVMLAAKIAGFEVLRLIAEPTAAAYAYGLNKNQKGCYLVYDLGGGTFDVSILNIQEGIFQVIATNGDNMLGGNDIDVVITQYLCNKFDLPNSIDTLQLAKKAKETLTYKDSFNNDNVSINKQILEQLILPLVERTINIAQECLEQAGNPNIDGVILVGGATRIPLIKDELYKAFKIDILSDIDPDKAVVWGAALQAENLIAPHTNSLLIDVAPLSLGMELYGGIVEKIIMHNTPIPISVVKEFTTYVDNQTGIQFHILQGEREMAADCRSLARFELKGLPPMKAGYIRAEVTFSIDADGILSVSAYEKISNTSHAIEVKPNHGIDKTEIDIMLENAYKNAKIDYTTRLLQEAVIEAEALIFSIERAIAELTILSSESEISIINSLLDNIKEAVHARDWILINNSIKEFKSKIKKSIDTKFNIIINDLLKGKNINQIK", - "output": "ATP binding ; ATP hydrolysis activity ; ATP-dependent protein folding chaperone ; unfolded protein binding ; iron-sulfur cluster assembly" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MSEKVKFEKRESLKEKPDTANLGFGQYFTDYMLSVDYDADQGWHDMKIVPYAPFEISPAAQGLHYGQAVFEGLKAYKHNGEVVLFRPDQNFKRINNSLARLEMPEVDEEALLEGLKQLIDVERDWVPEGEGQSLYIRPFVFATEGVLGVRSSHQYKLLIILSPSGAYYGGDTLKSTKIYVEDEYVRAVRGGVGFAKVAGNYAASLLAQTNANKLGYDQVLWLDGVEQKYVEEVGSMNIFFVENGKVVTPALNGSILPGITRKSIIQLAEDLGYEVEERRVSIEELFNAYDKGELTEVFGSGTAAVISPVGTLRYEDREIVINNNEPGKITQKLYDTYTGIQSGKLEDKYGWRVEVPKY", - "output": "L-isoleucine transaminase activity ; L-leucine transaminase activity ; L-leucine:2-oxoglutarate aminotransferase activity ; L-valine transaminase activity ; isoleucine biosynthetic process ; leucine biosynthetic process ; valine biosynthetic process" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MSRKESRTQAFQTLFQLEMKNSDLTIEEAISFIKDDNPDLEFEFISWLVTGVKDHEVVLDEKIQPHLKDWTLARLLKSDRIILRMSTFEMLHSSTPQKVIINEAVELAKQFSDDDHYKFINGVLSNIE", - "output": "RNA binding ; DNA-templated transcription termination ; transcription antitermination" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MAPSAVGLLVFLLQAALALNPEDPNVCSHWESYAVTVQESYAHPFDQIYYTRCADILNWFKCTRHRISYKTAYRRGLRTMYRRRSQCCPGYYENGDFCIPLCTEECMHGRCVSPDTCHCEPGWGGPDCSSGCDSEHWGPHCSNRCQCQNGALCNPITGACVCAPGFRGWRCEELCAPGTHGKGCQLLCQCHHGASCDPRTGECLCAPGYTGVYCEELCPPGSHGAHCELRCPCQNGGTCHHITGECACPPGWTGAVCAQPCPPGTFGQNCSQDCPCHHGGQCDHVTGQCHCTAGYMGDRCQEECPFGTFGFLCSQRCDCHNGGQCSPATGACECEPGYKGPSCQERLCPEGLHGPGCTLPCPCDTENTISCHPVTGACTCQPGWSGHYCNESCPAGYYGNGCQLPCTCQNGADCHSITGSCTCAPGFMGEVCAVPCAAGTYGPNCSSVCSCSNGGTCSPVDGSCTCREGWQGLDCSLPCPSGTWGLNCNETCICANGAACSPFDGSCACTPGWLGDSCELPCPDGTFGLNCSEHCDCSHADGCDPVTGHCCCLAGWTGIRCDSTCPPGRWGPNCSVSCSCENGGSCSPEDGSCECAPGFRGPLCQRICPPGFYGHGCAQPCPLCVHSRGPCHHISGICECLPGFSGALCNQVCAGGHFGQDCAQLCSCANNGTCSPIDGSCQCFPGWIGKDCSQACPSGFWGSACFHTCSCHNGASCSAEDGACHCTPGWTGLFCTQRCPSAFFGKDCGHICQCQNGASCDHITGKCTCRTGFSGRHCEQRCAPGTFGYGCQQLCECMNNATCDHVTGTCYCSPGFKGIRCDQAALMMDELNPYTKISPALGAERHSVGAVTGIVLLLFLVVVLLGLFAWRRRRQKEKGRDLAPRVSYTPAMRMTSTDYSLSDLSQSSSHAQCFSNASYHTLACGGPATSQASTLDRNSPTKLSNKSLDRDTAGWTPYSYVNVLDSHFQISALEARYPPEDFYIELRHLSRHAEPHSPGTCGMDRRQNTYIMDKGFKDYMKESVCSSSTCSLNSSENPYATIKDPPILTCKLPESSYVEMKSPVHLGSPYTDVPSLSTSNKNIYEVGRCLT", - "output": "basolateral plasma membrane ; homotypic cell-cell adhesion ; retina layer formation" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MESSIFKPSSMDLIRAGLQDLDKARALFDQLKADDIPDERCAELLSALAHACDPDMALSNFVDIVNAMQSSQRDLEHVIPDNDALKRLVTVLGVSDAMGKFMRFKPQLVEAAAVDNCNSHLFNHAQRRARLLKAVGADPDEPAMPVASKDLAEAATALRSSYRNQLAAIIAQDAVADDPTSIQPTISRELSDLADAALEGALAIARHETEGSEHVRFTIIGMGKLGAQELNYVSDVDLIYVVEPADKDVDHQTLIRVGTKMGTMLQRVCQSAIMGVAEQPLWQIDGGLRPEGKDGALVRVLSSHKNYYEQWAENWEFQALLKARPVAGDPDLGQAYMDMTRPFVWSASKRKNFVYDCQKMRKRVEDLIPAPLKDREIKLGRGGLRDVEFTVQMLQLVHGRTDESLRTSNTLDSLQRLSEGGYVSRKQAVRMSQDYRFERVMEHRQQIWSLKRTHLFPDLGRASVGGLEKKRDIDVDELNQNQELRRLARAFGLHPEELVDKYDDTRREVRHLHLDIYYRPMLPVNAQMENDQIVLSVEAAQERFESIGFGDPDAAIRHVQALTAGVGRAAKINRIILPAVLQWLGEGQNPDMGLLNWRKLEENFGTESGYLGFLRDSTSAAQRLCHILSNSRFLGDALNKSVESISWLGDDDNLQARTREALDVQTGSALERFGSNINEFATSMRAMRRHEIERIGLSWMSGVISDSDSLKAMTDVYDAIIDASLTWAVRHQIAEFGVETAPAGITVIAMGRYGGREVNFSSDADAILIYRPADDADDGQANAFAKKVVEDLRNILQGPTTLEPKIELDLDLRPEGKNGPLVRSYASCEEYYESWASTWERQALLRARYAAGDAELARDFLINIADPLRYPTTELTEAELQNIRKLKARMEAERLPRGVRRERHLKLGKGGLSDVEWTVQLMQLQHAGDIKDLRVNGTLEALDVLEAKKLISAIDAIQLRKAWTLCTAARNGSYLWSGRANQADILPDDIYSLGGIAVYLGYGAHRGQHFENDLLAVMRKCRDVCQRLFYGKTEGEAAAATTATASAATQQPQTAPRPRMHVIAPRLERNRRRAQR", - "output": "adenylyltransferase activity ; -adenylyl-L-tyrosine phosphorylase ; ATP binding ; magnesium ion binding ; metabolic process ; regulation of glutamine family amino acid metabolic process" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MTKQHAFTREDLLRCSRGELFGPGNAQLPAPNMLMVDRITHISEEGGKYGKGELVAELDINPDLWFFACHFEGDPVMPGCLGLDAMWQLVGFFLGWQGLPGRGRALGSGEVKFFGQVLPEAKKVTYNIHIKRVLKGKLNMAIADGSVSVDGREIYTAEGLRVGVFTSTDNF", - "output": "cytoplasm ; (3R)-3-hydroxydecanoyl- dehydratase activity ; (3R)-hydroxymyristoyl- dehydratase activity ; trans-2-decenoyl-acyl-carrier-protein isomerase activity ; fatty acid biosynthetic process" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MANRVVLDFEKPLFELEAKLEEMRVYLRNSSRDQDSSDQDVLNREIEALEVKVETLRRSIYKNLTRWQKVQLARHAERPFTLDYIYMMTRDFVEMAGDRYFSDDKAIVGGFAILEDIPSGFSQPVMIIGHQKGRDTKSNLYRNFGMAQPEGYRKALRLMKLAEKFNKPVITLIDTPGAFPGIEAEERGQAEAIARNLFEMARLTVPVICVIVGEGASGGAIGLGVGNRILMAENSWYSVISPESCSSILWRSWNYKEQAAEALQPTAEDLLAQGIIDRIIPEPMGGAHTDPEAMAGTLKEMLIEELRILMSKESDVLVRERVEKFSGMGVWDE", - "output": "acetyl-CoA carboxylase complex ; acetyl-CoA carboxylase activity ; ATP binding ; carboxyl- or carbamoyltransferase activity ; fatty acid biosynthetic process ; malonyl-CoA biosynthetic process" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MLIPSKLSRPVRLEHTVVRERLLAKLSGANNYRLVLITSPAGYGKTTLISQWAAGKNDLGWFSLDEGDNQQERFASYLIAAIQQATGNHCAASEAMVQKRQYASLSSLFAQLFIELADWQRPLYLVIDDYHLINNPVIHDAMRFFLRHQPENMTLVVLSRNLPQLGIANLRVRDQLLEIGSQQLAFTHQEAKQFFDCRLTSPIEADDSSRLCDDVAGWATALQLIALSARQNNSSAQHSARRFAGINASHLSDYLVDEVLDNVDARTRNFLLKSSLLRSMNDALIVRVTGEENGQMQLEEIERQGLFLQRMDDSGEWFRYHPLFGSFLRQRCQWELAVELPEIHRAAAESWMAQGFPSEAIHHALAAGDAKMLRDILLNHAWGMFNHSELGLLEQSLAALPWSNLLENPRLILLQAWLMQSQHRYSEVNTLLARAEQEMSVEMDTAMHGDFNALRAQVAINDGDQDEAERLSMVALEELPLANYYSRIVATSVHGEVLHCKGKLTKSLAVMQQTEQMARRHDVWHYALWSIIQQSEILFAQGFLQAAWESQEKAFQLVREQHLEQLPMHEFLLRIRSQLLWAWARLDEAEACARQGMDVLSTYQPQQQLQCLALMVQCSLARGDLDNARSHLNRLENLLGNGHYHSDWVSNADKVRVIYWQMTGDKTAAANWLRQTPKPEFANNHFLQSQWRNIARAQILLGDFEPAEMVLEELNENARSLRLMSDLNRNLLLLNQLYWQSGRKSEAQKALLEALTLANRTGFINHFVIEGEAMAQQLRQLIQLNTLPELEQHRAQRILRDINQHHRHKFAHFDEGFVERLLNHPEVPELIRTSPLTQREWQVLGLIYSGYSNEQIAGELDVAATTIKTHIRNLYQKLGVAHRQDAVQHAQQLLKMMGYGV", - "output": "ATP binding ; DNA binding ; DNA-binding transcription factor activity ; carbohydrate metabolic process ; positive regulation of carbohydrate metabolic process ; positive regulation of DNA-templated transcription" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MSKEKFERTKPHVNVGTIGHVDHGKTTLTAAITTVLAKTYGGAARAFDQIDNAPEEKARGITINTSHVEYDTPTRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDGPMPQTREHILLGRQVGVPYIIVFLNKCDMVDDEELLELVEMEVRELLSQYDFPGDDTPIVRGSALKALEGDAEWEAKIIELAGFLDSYIPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIIKVGEEVEIVGIKETQKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREEIERGQVLAKPGTIKPHTKFESEVYILSKDEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEMVMPGDNIKMVVTLIHPIAMDDGLRFAIREGGRTVGAGVVAKVLG", - "output": "cytoplasm ; GTP binding ; GTPase activity ; guanosine tetraphosphate binding ; translation elongation factor activity ; translational elongation" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MTQAEKGDAENGKEKGGEKEKEQRGVKRPIVPALVPESLQEQIQSNFIVVIHPGSTTLRIGRATDTLPASIPHVIARRHKQQGQPLYKDNWLLREGLNKPESNEQRQNGLKMVDQAIWSKKMSNGTRRIPVSPEQARSYNKQMRPAILDHCSGNKWTNTSHHPEFLVGEEALYVNPLDCYNIHWPIRRGQLNIHPGPGGSLTAVLADIEVIWSHAIQKYLEIPLKDLKYYRCILLIPDIYNKQHVKELVNMILMKMGFSGIVVHQESVCATFGSGLSSTCIVDVGDQKTSVCCVEDGVSHRNTRLCLAYGGSDVSRCFYWLMQRAGFPYRECQLTNKMDCLLLQHLKETFCHLDQDISGLQDHEFQIRHPDSPALLYQFRLGDEKLQAPMALFYPATFGIVGQKMTTLQHRSQGDPEDPHDEHYLLATQSKQEQSAKATADRKSASKPIGFEGDLRGQSSDLPERLHAQEVDLGSSQGDCLMAGNESEEALTALMSRKTAISLFEGKALGLDKAILHSIDCCSSDDTKKKMYSSILVVGGGLMFHKAQEFLQHRILNKMPPSFRRIIENVDVITRPKDMDPRLIAWKGGAVLACLDTTQELWIYQREWQRFGVRMLRERAAFVW", - "output": "centrosome ; Ino80 complex ; nucleoplasm ; ATP binding ; cell cycle ; cell division ; chromatin remodeling ; DNA recombination ; DNA repair ; positive regulation of DNA repair ; positive regulation of DNA-templated transcription ; positive regulation of telomere maintenance in response to DNA damage ; regulation of cell cycle ; regulation of DNA replication ; regulation of DNA strand elongation ; regulation of embryonic development ; telomere maintenance" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MRSNLPLNALRAFEASARHLSFTRAALELCVTQAAVSQQVRILEDRLNRVLFKRLPRGLEMTDEAQALFAVLTDAFGQIDTIFRQFEGGEYREVLTVAAVGTFAVGWLLPRIEQFRQAHPFVELRLRTNNNVVNLAAEGLDFAIRFGNGLWPATHNEMLFEAPLTVLCTPETAQRLRRPADLLQENLLRSYRVDEWDNWFAAAGVTAERINGAVFDSSRLMVETVIHTGGAALVPAVMFARELAAGQLVRPFDIEIQMGYWLTHLKSKPMTPAMEIFRDWIVKMA", - "output": "cytoplasm ; DNA binding ; DNA-binding transcription factor activity" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MAGPFSRLLSARPGLRLLALAGAGSLAAGFLLRPEPVRAASERRRLYPPSAEYPDLRKHNNCMASHLTPAVYARLCDKTTPTGWTLDQCIQTGVDNPGHPFIKTVGMVAGDEETYEVFADLFDPVIQERHNGYDPRTMKHTTDLDASKIRSGYFDERYVLSSRVRTGRSIRGLSLPPACTRAERREVERVVVDALSGLKGDLAGRYYRLSEMTEAEQQQLIDDHFLFDKPVSPLLTAAGMARDWPDARGIWHNNEKSFLIWVNEEDHTRVISMEKGGNMKRVFERFCRGLKEVERLIQERGWEFMWNERLGYILTCPSNLGTGLRAGVHIKLPLLSKDSRFPKILENLRLQKRGTGGVDTAATGGVFDISNLDRLGKSEVELVQLVIDGVNYLIDCERRLERGQDIRIPTPVIHTKH", - "output": "mitochondrial inner membrane ; mitochondrion ; ATP binding ; creatine kinase activity ; phosphocreatine biosynthetic process ; phosphorylation" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MRKRGLQVHARVRPVLNIGIVVGVLLGGVVLLQPFYLIQEGQVALITQFGEIIKTNNTAGLYVRAPFLHHVHKYTAKLLRVDGDPQKIPTKEKQFIEVDTTSRWRIEDVKKFYQSLGTYEAAYSRISDIIDSSVRDIITVNGLDDVVRSTNAINESNHSEQFDVPVSQLAFDRGAEKTAHMTIEKGRESLAREISQAANDQLKDFGIVVVDVIFKGIKYSDELQASVFNRMVKERNQIAQMFRSTGEGKKAEWLGKLDNEKRSLLSKAYEEAERIKGEADARAAAVYAQSYGKSPEFYGFWKSLEVYKKSLPDTEKILSTDLEYFKHLYQH", - "output": "membrane ; regulation of peptidase activity" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MQKDYMKLHSNSDFDADQLDEHDDNVFQDVYDTGFDDGYIKANQENLIANQYKKLDKNSYQNGNNSFYTKDELEKLKKQSFQVNQDIDYYQQAQTEISSERQRLLQAIDDLEANQDQFHPEDFQAERQYLINELDRLDSELYHIEQYKNDSIDFVNELNQRLSAEQAKIDSYNSSLDKNIRKDYIQIDQLKNKLAEETTEYNDLLNRSTDEISEIDRQSERLQNLIDERIAKLNNDSYGVSSLDSSTRERLKKEIHDLSEQRKKLQSAKKLHLYNLNLKKESIRRYRSQLEQYLESLKQMRNEHNKKLKGYAQNLDNIKNEVEKAKQNFNDQQLKILQSKANADQYFALRKIELENSYKKAKNAILEANKAHAKNVQEEQALANKNNKTQRLLNKLKEDYDRLKIASLSFESMRKQSLAALNNLQDELKQKHNLLERKKHEQDGIVNEKISELEGYRSDLVDQKLKIEREKENQERRYKAAEASLNKKRQEIDELFLEANTKLNEASLKENDLNNQKREILAKLRNLEHLKSEIDQRRRDLDQRELIDQQTIRKIQLDVESERADLQRILLIERKKNDERQQELLQYERDIKRQQTDFENTVNWEQKKLSQREKELKDGYEQLQLKQSEVQEKIDELNEEINRAQKSKQNSLVLEQKLKSDLEHLNLSKNYLDKQQEELNQKSDKMIEDLKVFERDLKRQKEDLSIYEKSLQQKEASLINFQNDVTVQKNEAYHKAQAIHQELELKKAAIENELRKLTAERKAVDADKEENTKLKKFIDEEIRSLANERKELEIYQNNIENFKNNAVDRLNVLESDLVKKRNELEQLKKEQQTHYNELNSNLTNELQELEEQKKKFAHQKQQKFEELLQAKNNLSIKENELVLYAQKVNDRYNELKAIEKSNTAKSEMINAKLEEFKHAEIDYLNYQNKIKQEQIKFDNQVKILESQYNQRNEILLIREEQIKQKKAEQQAQEKQIQKDFKRLQEEKNNFDDQKRNKFNKISNLYLEIKKQRDEVDLAQRQIEDQKEELLIKAREGRLQKQEIEDRLAVLEKSEKRFRQEDELLAKKRIDLIERIGVLKADINKKHEILSLRSVQLTEKAKKQQEKDADLQRKFDLLESEVERFNEEKKSEFQKLKVERDKLAHREKNVSKNMNEINLALAKLDLIRKNNKVDKAKINEKLALLNDQKEKIDRENDLLDAKKTEVITRLRKMENDLEFEKQKVLLDRSNIERISSDQQALARELETKYQTLEREKRSFSQRKENELKEIDDFYQQVQHKERTLNLKIEDLKQLRYLLEKESYNVNVNKKDLKVRIEHYQRLERAIKNEQHKLNNQKNNFFNKVELLNDQLNKKSSKIALLRSKIYNTYKQQQQQKQILLEEKHKNSQLRKSLLKTQEELHQQKAQFSIAKKQEEKKLKNQKDLIQNTLSEVIKQKDQITNIKQEVDLKQTQLNNLEKLIIKQRADLQKELEKNSENTYRLQKAERLLEEKKTKLRLEYDKAKKVLSTAKATDQALKTKQAKVQDQFKKLVLINKKIIEARNNLLKQRNIIQKEINNRNMANFQNPYPNFLNLAPNTQVVPAQTIMPVQTPQLVGVNYPNQPAFDFNNPLMQMQQLINQQQMLMMQKEHQWALEEANKKNSRLAKQLKQLKHHKQALTESTSEHLNYHNLLNADNSYKINSLQNLLSKVAYNTKRRINQLEHNLDPETADLNQLHELNANSQLLDEIRTVLSNTTTNTNAVVPANSYSKELRMLFDEIKADFKKQAVLFNTQKEVFTNQINQLAQAVEQGPIEVRKTLESQDQKYQQMFDNFRDAYEQNISLLRNENNEVQKKLTDLYDEIAAIKTNTEKIKKTTLRPEVRNNANEGLASFNSVNRDKKDYLDQTLPVHQNLRIDLNQNRDLSHAKKERINQLANEIKTIKELIEKRKQTSL", - "output": "adhesion of symbiont to microvasculature" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MTATKQHKKVILVGDGAVGSSYAFALVTQNIAQELGIIDIFKEKTQGDAEDLSHALAFTSPKKIYAADYADCHDADLVVLTAGAPQKPGETRLDLVEKNLRINKEVVTQIVASGFKGIFLVAANPVDILTYSTWKFSGFPKERVIGSGTSLDSARFRQALAAKIGVDARSVHAYIMGEHGDSEFAVWSHANVAGVGLYDWLQANRDVDEQGLVDLFISVRDAAYSIINKKGATFYGIAVALARITKAILDDENAVLPLSVFQEGQYEGVEDCYIGQPAIVGAYGIVRPVNIPLNDAELQKMQASANQLKAIIDEAFSKEEFASAAKN", - "output": "cytoplasm ; L-lactate dehydrogenase activity ; glycolytic process" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MAYGTRYPTLAFHTGGIGESDDGMPPQPFETFCYDSALLQAKIENFNIVPYTSVLPKELFGNIVPVDTCVKSFKHGAVLEVIMAGRGAALSDGTHAIATGIGICWGKDKNGELIGGWAAEYVEFFPTWINDEIAETHAKMWLKKSLQHELDLRSIAKHSEFQFFHNYINIKQKFGFCLTALGFLNFENAEPAKVN", - "output": "cytoplasm ; arginine decarboxylase activity ; arginine catabolic process" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MPIGVPRVRFQYRRDRSRVWIDIYNRLYRERCLFLAHVVESQIANQLVGLFIYLGVQDETKDIFLFINSPGGGIISGFAIYDTMQFVRPDIQTICVGLAASMGSFLLVGGAITKRLAFPHARVMIHQPMSAFFETQTVEAILEAEELLKLRESLAKVYVQRTGKPDWVIAEDMERDVFLSATEAQSYGIVDVVGVALASKG", - "output": "plastid stroma ; ATP-dependent peptidase activity ; serine-type endopeptidase activity ; proteolysis" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MAVTSFPADSLASMESVKQTVRSTSTCSAATVLSLQTLFRSAGEMETTLRRTARGTKATATNATASSRAKTTRTKSTSTSTTRTKTPAQDVSTFTSTSASLADTRLSNQEKLVLATEVFNSTLKTLSDAVKTVMSISKEKKDASPTKRGTTTKGRVKTSQPDLTDNENGVSAVAECARLSLSCLRMLRTDAMVDGGLPNLQLEQGACVLAGRLLALGLNDAAYKELRGLKRRIQSYLEELPSGRKRTGRKDAEDGEETAKERMSDLLSFSDIANARSIHGLLVSFQSNALRLIAAEKRPATVQKLVPSLQLTDESSPANVIMASIDSGALTKDKAAVQLQLLSSTVLSLSASGASTGKERLRPSIVLSLQLLALEIRCMSWKLSGHACEDNKEMWDPLARYIGAFAQATKSIEKAEFAVIYKNIVRLQSAFSKTQNCATRSTDNLSVARIATILGQLAQDAGCFDEALQLFTESLNPLSSSQCLGMATVRCKIAALHFQAFKSSVKLPGDVSDAVSQATAALSISLKGSSHDLDELLVQAAKLKKLAMGWFGDLISKGQGSQCENVVFPRICEFLSSFVRFLRRYIGRRPENDELNDREIFQKRIDAAQNIVLAAVDSTIAIGKLSVMSQRPAWEETVSTLLDCQRLLATIEPFDEVDVATADSIDQALVKLSNLFWSRYLKEKEAGKNARELLPLLKQSAYLLSGCSPSQRATGFAPLKYERLAHTYIEGNMVSEAEVAFRQSITDHIAAGALDKIASSTDGCFPHQMNQDPKRSGFTLGRVLSAYLKVKLRNKRSAVNEIFDDETLPSVQRGHVLEWQLGILTEIHGTSNNDNVFRSVFAEVATRLFKVYPAEQHPVRRLRVLLSGLRFALEQPGFLDSSLLQRFADEGRKGLDDDDYQDDDDIKSLAVYLKNSVRLTLGLQQGSLGPEELELIVSTWTSILRFCHDLKSLVACVGNVEYFLLQMKAVVDYTEIHGLWKFQLSTLELVLRVTELHGAGTFSEAIIVLSRLVLQYCRMGFCIKAHSLLSRADGYIANHEVSCLARLSYELARVGFLLETGDNQKAATVLSTARMIYEKHQATEDLDACSVLTKISWERLVADAAFMSSRLSFAQGSIKDALYFAKLSVRLNCRIWAKVEKLAQKKQEKAVVGDSSELEIVVEGMAKLEVSQTSSTYSQGAPFWPHIGSHHSSLLHLANLSAHHGLFQDAIYYGEQALKINKSLNANVRLIASQAHLGSHWILGGHISEGQQLLASAKALSDKLGSSIELVSLRLSLAALHRVEGDYRNEYRTLREAEKLLGGLFESQADSADIPDLEEKMDKLRVRPKSRSTRQPATTATRRTRSATTSARSTPKPPQSVEATNASNTLLQMKSEILLQQAASLRAQREFEAASTLLSDARKFAVTRNSRISVHLGESEHLLADAIRNFANHAVYCVLPESTISLPSLEPKAASESSSKSATRKTRAPTRGTRTKAQAATEDFSVMLSKAGDCLNGIFDTATQLGSTLDSHSASRLMSRISMLSHVTASPNHILWPHSPANMNEVGRIGAFARERAAIRIDKRLADYCDPLLWPRSELESEGVSPDFTKEYVDILPDNWNVLSLSLSADRAEFVVSRLHRGCSPFLLRLPLRRGNSEDEEEQFTFEDGRDEMKELIRLANESAHAAKLQVDRQMKKEWWKNREALDRRMENLLQNIENVWFGGFRGIFSPIPLCEKSLARFASAFENILENHLPSRRKGSRAQGPKLTLHPNVLELFVGVKGLDDQEDPEDTLMDLLYFVVDILQFQGERNAYDEVDFDMMVVETLDAVRAYHEAAKDQATQRPNNTVLVLDKSLHLFPWESLPCLQGLPVCRVPSLECLRDRVLHLRSGKQSALSIDRRNGTYILNPTGDLKTTQETFEKDLSSLKGWTGMVNRQPTEDEFKDSLQSKSLFLYFGHGSGAQYIRGRTVKRLDRCAVAFLMGCSSGTLTEAGEYEPYGTPMNYLQAGSPALVATLWDVTDKDIDRFAKATFEHWGLIGNGHRGNEGIGEAGVALDAAVSQSRGACVLKYLNGAAPVVYGVPGVFLH", - "output": "cytoplasm ; mitotic spindle ; mitotic spindle pole body ; nucleus ; cysteine-type endopeptidase activity ; cell division ; meiotic chromosome separation ; proteolysis" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MSWQTYVDEHLMCEIEGLHLASTAIIGHAGTVWAQSTAFPQFKPEEITGIMKDFDEPGHLAPTGMFVAGAKYMVIQGEPGAVIRGKKGAGGITIKKTGQALVVGIYDEPMTPGQCNMVVERLGDYLLEQGL", - "output": "cytoplasm ; cytoskeleton ; actin binding" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MAKKVFKRLEKLFSKIQNDKAYGVEQGVEVVKSLASAKFDETVEVALRLGVDPRHADQMVRGAVVLPHGTGKKVRVAVFAKDIKQDEAKNAGADVVGGDDLAEEIKNGRIDFDMVIATPDMMAVVGKVGRILGPKGLMPNPKTGTVTMDIAKAVTNAKSGQVNFRVDKKGNVHAPIGKASFPEEKIKENMLELVKTINRLKPSSAKGKYIRNAALSLTMSPSVSLDAQELMDIK", - "output": "large ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; tRNA binding ; regulation of translation ; translation" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MSEIKLNYHKTHFLTSAPNIRSIPEDTGIEIAFAGRSNAGKSTALNALTNQKNLARTSKTPGRTQLINLFEVEPNYKLVDLPGYGYAAVPEQMKIQWQKSLGEYLQKRECLSGLVVLMDIRHPLKDLDQQMIEWAVSADLPILLLLTKADKLSQSARSKQVKMVREAILPFQGDIQVEAFSAQNKIGIDKLAAKLDFWFSPLFAK", - "output": "GTP binding ; metal ion binding ; division septum assembly" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAFPDIRRGVTDAQVVSRRDTFAGHITLLFGHYNGVGIYLIDAPHLYDRPGSPYHDTNLFAYTDNVLRFALLGWVGAEMASGLDPFWRPDVVHAHDWHAGLAPAYLAARGRPAKSVFTVHNLAYQGMFYAHHMNDIQLPWSFFNIHGLEFNGQISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQLQIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEYPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDCSLENLADGVASGFVFEDSNAWSLLRAIRRAFVLWSRPSLWRFVQRQAMAMDFSWQVAAKSYRELYYRLK", - "output": "alpha-1,4-glucan synthase activity ; glycogen (starch) synthase activity ; starch synthase activity ; glycogen biosynthetic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MQAFRVHTGIGVPLRRSNVDTDQIIPAVFLKRVTRNGFEDGLFATWRVDPSFVLNLSPFDRGSVLVVGPDFGIGSSREHAVWALMDYGFRVVISSRFGDIFHGNAGKAGLLAAQVAQDDVEFLWKLIEQKPGLEITVNLQDRNINAATVVLPFKIDDYTAWRLLEGLDDIALNLRKLDEIEAFESARPAWKPRTLPTT", - "output": "3-isopropylmalate dehydratase complex ; 3-isopropylmalate dehydratase activity ; leucine biosynthetic process" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MSVISTLRDRATTTPSDEAFVFMDYDTKTGDQIDRMTWSQLYSRVTAVSAYLISYGRHADRRRTAAISAPQGLDYVAGFLGALCAGWTPVPLPEPLGSLRDKRTGLAVLDCAADVVLTTSQAETRVRATIATHGASVTTPVIALDTLDEPSGDNCDLDSQLSDWSSYLQYTSGSTANPRGVVLSMRNVTENVDQIIRNYFRHEGGAPRLPSSVVSWLPLYHDMGLMVGLFIPLFVGCPVILTSPEAFIRKPARWMQLLAKHQAPFSAAPNFAFDLAVAKTSEEDMAGLDLGHVNTIINGAEQVQPNTITKFLRRFRPYNLMPAAVKPSYGMAEAVVYLATTKAGSPPTSTEFDADSLARGHAELSTFETERATRLIRYHSDDKEPLLRIVDPDSNIELGPGRIGEIWIHGKNVSTGYHNADDALNRDKFQASIREASAGTPRSPWLRTGDLGFIVGDEFYIVGRMKDLIIQDGVNHYPDDIETTVKEFTGGRVAAFSVSDDGVEHLVIAAEVRTEHGPDKVTIMDFSTIKRLVVSALSKLHGLHVTDFLLVPPGALPKTTSGKISRAACAKQYGANKLQRVATFP", - "output": "adenylyltransferase activity ; ATP binding ; ligase activity ; Actinobacterium-type cell wall biogenesis ; fatty acid biosynthetic process ; induction by symbiont of host immune response ; lipid biosynthetic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MTLSDSDLELITTELGRELTPAEAALFENLWSEHCAYRSSRPLLQSFTTGDDSANDEGAEHVVIGPGDDAAVVRLPRVDEASETPIYITMGIESHNHPSYVDPYDGAATGVGGIVRDTLSMGAYPIALADSLYFGSFDRERTQYLLDGVVEGIADYGNAIGVPTVAGSVEFHNKYTGNPLVNVACIGLLTDERLVTAEAQSPGNKLVLVGNATGRDGLGGASFASEDLSEDAETEDRPAVQVGDPYTEKRLIEANEELITAELIQSARDLGAAGLGGASSELVAKGGLGARINLERVHQREPAMNAMEILLAESQERMCYEVHPDDVETVGDIAAKYDLGYAVIGEIRDGNYVCTFGDETVVDVPAGFLADGAPMNDLSATEPPTPEESTFPAIDAATAFNTIISTPNTASKRWIYRQYDHEVGLRTAMRPGDDAALIAIREAGVGLALSSGAVPAWTESNPYKGAQAVALENATNVAAKGATPIAAVDCLNGGNPEKPAVYGAFKDIVQGLADMCHTLSIPVVGGNVSLYNDSTSGPIPPTPTLALVGTKKTFDAPPAALTGDGTLLLVGHQSNNLGGSELLAQIGGTDKFPALPSNPTAVVDSLARVANHPSTLATHDVSTGGLAVTLAELITSDAGARVTVQNKTSLFTETPGRAVIETTDPDAVRHIFEGVAPVVSLGDTTTDGTLTINIDDEDTANESPAVTTDAATVAKQRRILEDALE", - "output": "cytoplasm ; ATP binding ; magnesium ion binding ; phosphoribosylformylglycinamidine synthase activity ; 'de novo' IMP biosynthetic process" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "AEQLQRLKAEFQANRYITEQRRQSLAQELSLNESQIKIWFQNKRAKIKKASGMKNGLALH", - "output": "nucleus ; DNA binding ; DNA-binding transcription factor activity, RNA polymerase II-specific" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MLERIKGCFTESIQTQIAAAEALPDAISCAAMALVQSLLNGNKILCCGNGTSAANAQHFAASMINRFETERPSLPAIALNADNVVLTAITNDRLHDEVYAKQVRALGQAGDVLLAISTRGNSRDIVKAVEAAVTRDMTIVALTGYDGGELAGLLGQLDVEIRIPSHRGARVQELHMLTVNCLCDLIDNTLFPHQDD", - "output": "carbohydrate derivative binding ; carbohydrate derivative metabolic process ; DNA replication" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MDRLRIVGGRRLEGAVTISGAKNAALPQIAAALLSPYPLELTNLPDVTDVENMLGVVRLHGAEVTRSAHAATIDTSAAVSKETSYDTVRKMRATVLVLAPLLARFGHARVSLPGGCAIGARPVDMHVAALAALGAKIAIENGLIVASAPNGLTGTRIVLSSPSVGATETAMMAATTAKGETEILNAAREPEVADLAACLNAMGARIEGAGTHRILIAGDTGWHAARHDIIPDRIEAGTYAIAAAITGGQLELTHARLEHMASVVQLLEATGVSVWPGDRGLIVSRERPLKAADLTTEPYPGFPTDLQAQFMALMCCAEGASLLRETIFENRFMHVPELMRLGANIKLQGTMALVRGGEKLHGAQVMATDLRASVSLVLAALVSEGETIINRVYHLDRGYEQLDRKLRLCGADIERLSA", - "output": "cytoplasm ; UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity ; cell cycle ; cell division ; cell wall organization ; peptidoglycan biosynthetic process ; regulation of cell shape ; UDP-N-acetylgalactosamine biosynthetic process" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MKLLVKAPAKINLSLDVLGKRQDGYHEVKMIMTTIDLADRLELTELAEDRIEILSHNRYVPDDQRNLAYQAAKLLKEKFNVKKGVSITIEKTIPVAAGLAGGSSDAAATLRGLNKLWNLGLTIDELAELGAEIGSDVSFCVYGGTAIATGRGEKIEHIKTPPSCWVILAKPHIGVSTADVYGNLKLNRVTHPNVDKMVDVINSGDYKGICDTVGNVLEDVTFGMHPEVARIKSQMKRFGADAVLMSGSGPTVFGLVHHDSRMHRIYNGLKGFCEQVYAVRLLGERETLE", - "output": "4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity ; ATP binding ; isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway ; phosphorylation ; terpenoid biosynthetic process" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MATPWRRALLMILASQVVTLVKCLEDDDVPEEWLLLHVVQGQIGAGNYSYLRLNHEGKIILRMQSLRGDADLYVSDSTPHPSFDDYELQSVTCGQDVVSIPAHFQRPVGIGIYGHPSHHESDFEMRVYYDRTVDQYPFGEAAYFTDPTGASQQQAYAPEEAAQEEESVLWTILISILKLVLEILF", - "output": "extracellular region ; apoptotic process" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MEQRNNVFQAKYNEYKQILEELQTKIIELGHDKDEHTIVIKTLKDAEPTRKCYRMIGGALVESDVQTSLPILETKKENIEGTISKMKETLIQTAKEFEKWKKDNKIQVVKN", - "output": "cytoplasm ; prefoldin complex ; protein folding chaperone ; tubulin binding ; unfolded protein binding ; protein folding ; tubulin complex assembly" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MRFQGFWLCLGLLFISVNAEFMDDSVEMEDFDENSEETDELSSEIKYKTPQPVGEVYFTETFDSGRLAGWVLSKAKKDDIDAEISIYDGRWEIEELKENRIPGDRGLVLKSRAKHHAISAVLAKPFIFADKPLVVQYEVNFQDGIDCGGAYIKLLADTDGLNLENFYDKTSYTIMFGPDKCGEDYKLHFIFRHKHPKTGVFEEKHAKPPDVDLKRFFTDRKTHLYTLVMNPDDTFEVLIDQIVVNKGSLLEDVVPPINPPKEIEDPTDEKPDDWDERAKIPDASAVKPEDWDESEPPQIVDSSAVKPDGWLDNEPEFIPDPNAEKPFDWNEDMDGEWEAPHISNPACRIGCGEWSPPMIDNPKYKGIWRPPMIDNPNYQGIWSPRKIPNPDYFEDNHPFLLTSFRALGLELWSMTSDIYFDNFIICSEKEVADRWAADGWGMKILIENANEPSIFKQLMSATEQRPWLWFIYLLTAALPIALIGSFCWPRKVKKKYEDVAFEKLDICKPQTKGALEQEVKEEKAALEKPVDLEEEKKQSDGEIVEKEEEGEPEEKSEEEIEIIEGQEEGNKSNKSGSEDEMKEADESTGSGDGPIKSVRKRRVRKE", - "output": "endoplasmic reticulum membrane ; calcium ion binding ; protein folding chaperone ; unfolded protein binding ; binding of sperm to zona pellucida ; protein folding ; protein-containing complex assembly ; ubiquitin-dependent ERAD pathway" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MAAAAVGGRGERLSSSSPTAAAPQVDAGKYVRYTPEQVEALERVYTECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLNAMNKLLMEENDRLQKQVSRLVYENGYMRTQLHNPSAATTDTSCESVVTSGQHHQQQNPAVLHPQRDANNPAGLLAIAEETLAEFMSKATGTAVEWVQMVGMKPGPDSIGIIAVSHNCSGVAARACGLVSLEPTKVAEILKDRPSWYRDCRCVDIIHVIPTGNGGTIELIYMQTYAPTTLAAPRDFWTLRYTSGLEDGSLVICERSLTQSTGGPSGPNTPNFIRAEVLPSGYLIRPCEGGGSMIYIVDHVDLDAWSVPEVLRPLYESPKILAQKMTIAALRHIRQIAHESSGEIPYGAGRQPAVFRTFSQRLSRGFNDAVSGFPDDGWSLLSSDGSEDITISVNSSPNKLVGSHVSPNPLFSTVGGGILCAKASMLLQNVPPALLVRFLREHRSEWADPGVDAYSAASLRASPYAVPGLRTSGFMGSQVILPLAHTLEHEEFLEVIRLEGHGFSHDEVLLSRDMYLLQLCSGVDENATSASAQLVFAPIDESFADDAPLLPSGFRVIPLDTKMDGPSATRTLDLASALEVGPGGASRASVEASGTCNRSVLTIAFQFSYENHLRESVAAMARSYVRAVMASVQRVAVAIAPSRLGPQIGMKHPPASPEALTLASWIGRSYRAHTGADIRWSDTEDADSPLALLWKHSDAILCCSLKPAPMFTFANNAGLDILETTLVNLQDISLEMILDDEGRKALCSEFPKIMQQGFTYLPGGVCKSSMGRQASYEQAVAWKVLSDDDAPHCLAFMLVNWTFM", - "output": "nucleus ; DNA binding ; DNA-binding transcription factor activity ; lipid binding" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MAAAPARGGGGGGGGGGGCSGSGSSASRGFYFNTVLSLARSLAVQRPASLEKVQKLLCMCPVDFHGIFQLDERRRDAVIALGIFLIESDLQHKDCVVPYLLRLLKGLPKVYWVEESTARKGRGALPVAESFSFCLVTLLSDVAYRDPSLRDEILEVLLQVLHVLLGMCQALEIQDKEYLCKYAIPCLIGISRAFGRYSNMEESLLSKLFPKIPPHSLRVLEELEGVRRRSFNDFRSILPSNLLTVCQEGTLKRKTSSVSSISQVSPERGMPPPSSPGGSAFHYFEASCLPDGTALEPEYYFSTISSSFSVSPLFNGVTYKEFNIPLEMLRELLNLVKKIVEEAVLKSLDAIVASVMEANPSADLYYTSFSDPLYLTMFKMLRDTLYYMKDLPTSFVKEIHDFVLEQFNTSQGELQKILHDADRIHNELSPLKLRCQANAACVDLMVWAVKDEQGAENLCIKLSEKLQSKTSSKVIIAHLPLLICCLQGLGRLCERFPVVVHSVTPSLRDFLVIPSPVLVKLYKYHSQYHTVAGNDIKISVTNEHSESTLNVMSGKKSQPSMYEQLRDIAIDNICRCLKAGLTVDPVIVEAFLASLSNRLYISQESDKDAHLIPDHTIRALGHIAVALRDTPKVMEPILQILQQKFCQPPSPLDVLIIDQLGCLVITGNQYIYQEVWNLFQQISVKASSVVYSATKDYKDHGYRHCSLAVINALANIAANIQDEHLVDELLMNLLELFVQLGLEGKRASERASEKGPALKASSSAGNLGVLIPVIAVLTRRLPPIKEAKPRLQKLFRDFWLYSVLMGFAVEGSGLWPEEWYEGVCEIATKSPLLTFPSKEPLRSVLQYNSAMKNDTVTPAELSELRSTIINLLDPPPEVSALINKLDFAMSTYLLSVYRLEYMRVLRSTDPDRFQVMFCYFEDKAIQKDKSGMMQCVIAVADKVFDAFLNMMADKAKTKENEEELERHAQFLLVNFNHIHKRIRRVADKYLSGLVDKFPHLLWSGTVLKTMLDILQTLSLSLSADIHKDQPYYDIPDAPYRITVPDTYEARESIVKDFAARCGMILQEAMKWAPTVTKSHLQEYLNKHQNWVSGLSQHTGLAMATESILHFAGYNKQNTTLGATQLSERPACVKKDYSNFMASLNLRNRYAGEVYGMIRFSGTTGQMSDLNKMMVQDLHSALDRSHPQHYTQAMFKLTAMLISSKDCDPQLLHHLCWGPLRMFNEHGMETALACWEWLLAGKDGVEVPFMREMAGAWHMTVEQKFGLFSAEIKEADPLAASEASQPKPCPPEVTPHYIWIDFLVQRFEIAKYCSSDQVEIFSSLLQRSMSLNIGGAKGSMNRHVAAIGPRFKLLTLGLSLLHADVVPNATIRNVLREKIYSTAFDYFSCPPKFPTQGEKRLREDISIMIKFWTAMFSDKKYLTASQLVPPDNQDTRSNLDITVGSRQQATQGWINTYPLSSGMSTISKKSGMSKKTNRGSQLHKYYMKRRTLLLSLLATEIERLITWYNPLSAPELELDQAGENSVANWRSKYISLSEKQWKDNVNLAWSISPYLAVQLPARFKNTEAIGNEVTRLVRLDPGAVSDVPEAIKFLVTWHTIDADAPELSHVLCWAPTDPPTGLSYFSSMYPPHPLTAQYGVKVLRSFPPDAILFYIPQIVQALRYDKMGYVREYILWAASKSQLLAHQFIWNMKTNIYLDEEGHQKDPDIGDLLDQLVEEITGSLSGPAKDFYQREFDFFNKITNVSAIIKPYPKGDERKKACLSALSEVKVQPGCYLPSNPEAIVLDIDYKSGTPMQSAAKAPYLAKFKVKRCGVSELEKEGLRCRSDSEDECSTQEADGQKISWQAAIFKVGDDCRQDMLALQIIDLFKNIFQLVGLDLFVFPYRVVATAPGCGVIECIPDCTSRDQLGRQTDFGMYDYFTRQYGDESTLAFQQARYNFIRSMAAYSLLLFLLQIKDRHNGNIMLDKKGHIIHIDFGFMFESSPGGNLGWEPDIKLTDEMVMIMGGKMEATPFKWFMEMCVRGYLAVRPYMDAVVSLVTLMLDTGLPCFRGQTIKLLKHRFSPNMTEREAANFIMKVIQSCFLSNRSRTYDMIQYYQNDIPY", - "output": "cytoplasm ; cytosol ; extracellular exosome ; focal adhesion ; Golgi-associated vesicle membrane ; membrane ; plasma membrane ; 1-phosphatidylinositol 4-kinase activity ; ATP binding ; cadherin binding ; kinase activity ; modulation by host of viral process ; phosphatidylinositol biosynthetic process ; phosphatidylinositol phosphate biosynthetic process ; phosphatidylinositol-mediated signaling ; phosphorylation ; reorganization of cellular membranes to establish viral sites of replication ; signal transduction" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MRNSIFEQEETFQDLSLRPKSIEKFVGQQRVVENLQVFIDSAQKRNDSLDHVLFCGPPGLGKTTLAHIISNELESRIHTTAGPLLSKAGDIAAILTNLHKNDILFIDEIHRLPSAVEEVLYPAMEDYHLDLIVGDGPAAKSIRINLAKFTLVAATTRIGMLSNPLRDRFGITLRLDFYTVSELLQLLQQAAERLSVNIENGAMIELAKRSRGTPRIALRLLKRVRDFLEVSDSDVITREFADLALNKMEVDQFGLDKLDYTYMDFIAKNYSDNPVGIKTIAAAISEKEDSIEELIEPYLIKIGFLSRTQRGRRLTGKALDYLSTINSARLP", - "output": "cytoplasm ; ATP binding ; ATP hydrolysis activity ; DNA binding ; four-way junction helicase activity ; DNA recombination ; DNA repair ; SOS response" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MNLNLAGADAGTVEVSDATFGKEFNESLVHQVVTAYFAAGRQGTRAQKTRSEVRGGGKKPWRQKGTGRARAGTIRSPLWRSGGVTFAARPQDYTQKVNRKMYRAAMRSILSELVRQERLVVVDSFEVDAPKTKQLVAKLKDLDLEKALIVTEDIDEKLFLAARNIPYVDVVDVAAADPVSLVAFDKVLVTVSALRKFEEKLG", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MQLVERFLCEPFPPLAQRIIQEGVVVNDRILKIDHFLNHRIDTDLMSAIGVELATRLQPFAAELILTAEASGIPPALATALAARLPLVYAKKYDPDVPVPALTRHIHSPTRDRQVQLAISARFIPAGSRVAIVDDFLANGRTALALADMVYEAGATVVAAAFVVEKQFQEGRLLLQKLGVPIISLAQITRFVDGRPLIYGWPSSVPGQSDG", - "output": "cytoplasm ; xanthine phosphoribosyltransferase activity ; purine ribonucleoside salvage ; xanthine metabolic process ; XMP salvage" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MKLHIVAVGHKMPGWIASGFDEYAKRMPPELRIELREVKPELRSGSRTADSVMAAEQQRIEAALPKNARVVALDERGRDWTTMQLAQALPAWQQDGRDVAFVIGGADGLAPALKSRAELLLRVSSLTLPHGMVRVLLAEQLYRAWSITQNHPYHRA", - "output": "cytoplasm ; rRNA (pseudouridine-N3-)-methyltransferase activity" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MAKQLLFNEEARKSLLAGVEQISNAVKVTLGPKGRNVLIDKSFGAPTVTKDGVSVAREVELENKFENMGAQLLKEVATKTNDVAGDGTTTATVLAYSMVKEGLKAVAAGMTPLELKRGIDKAVAIAVEDIQKNSKEIKGSEEVAHVASVSANNDAEIGKIIADAIAKVGKDGVIDVGEAQTMETVTDYVEGMQFDRGYISSYFVTDRDRMETVFENPYILIYDKSISTMKDLLPLLEQVAQSGRPLLIIAEDVEGEALATLVVNSLRGALKTCAVKAPGFGDRRKEMLEDIAVLTGGQVVSEELGFKLEAAQISMLGQAKSIKIDKDNTMIIDGAGKSKDIKDRVTQIKAQLDATDSEYDSEKLRERLAKLSGGVAVIKIGAVTEVEMKEKKHRVEDALSATRAAIEEGIVAGGGLAMIQAIAALEKADMSSLTEDEKVGFKIVKRALEEPIRQIAENAGLDGAVIAEKAKEKKGVGFDAAKMEWTDMVKAGIIDPAKVTRSALQNAASIASLLLTTECAITDIPEKQAGPAMPSPDMGGMGMY", - "output": "cytoplasm ; ATP binding ; ATP-dependent protein folding chaperone ; isomerase activity ; unfolded protein binding ; protein refolding" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MTQSNPNEQSVELNRTSLYWGLLLIFVLAVLFSNYFFN", - "output": "chloroplast thylakoid membrane ; photosystem II reaction center ; photosynthesis" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MMTTLRRRLPDIVQYSVLSLAAFLSIFPFIWMVIGTTNTTSQIIRGKVTFGTALFDNIASFFAQVDVPLVFWNSVKIALVGTALTLLVSSLAGYGFEMFRSKLRERVYTVILLTLMVPFAALMIPLFMLMGQAGLLNTHIAIMLPMIASAFIIFYFRQASKAFPTELRDAAKVDGLKEWQIFFYIYVPVMRSTYAAAFVIVFMLNWNNYLWPLIVLQSNDTKTITLVVSSLASAYSPEYGTVMIGTILATLPTLLVFFAMQRQFVQGMLGSVK", - "output": "plasma membrane ; carbohydrate transport ; transmembrane transport" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MEHADQYSWIIPFVPLPIPILIGMGLLLFPTATKRLLLFPTATKNLRRMWAFPNILLLSIVMIFSLDLSIQQINGSSIYQYVWSWTINNDFSFEFGYFIDSLTSIMSILITTVGIFVLIYSDNYMSHDEGYLRFFAYMSLFNTSMLGLVTSCNLIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNNLIYNNEVHFLFVTLCASLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLFPLFIVIPYIMNLISLIGIITVLLGATLALAQNDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLASGSIIHSMEAIVGYSPEKSQNMVFMGGLRKHVPVTQIAFLVGTLSLCGIPPLACFWSKDEILSDSWLYSPIFAIIAWSTAGLTAFYMFRIYLLTFEGHLNVHFQKYSGKKSSSFYSIKLWGKEEQKIINRNFRLFPLLTLTMNNNEQPYTIGGKKEARITITNFGYKKAFSYPHESDNTMLFPMLILLLFTLFVGAIAIPFNQEGMHLDILSKLLTPSINLLHQNSNDFEDSYQFFKNATFSVSIACFGIFTAFLLYKPFYSSVQNLNLLNSFVKRGPKRILLDKMIYLIYDWSYNRGYIDMFYSISLTKGIRGLAELTHFFDRRVIDGITNGVGITSFFVGESVKYLGGSRISFYLLLYLVYVFIFLVISYFILF", - "output": "chloroplast thylakoid membrane ; NADH dehydrogenase (ubiquinone) activity ; quinone binding ; ATP synthesis coupled electron transport" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MSQNKRVVITGMGALSPIGNDVKTTWENALKGVNGIDKITRIDTEPYSVHLAGELKNFNIEDHIDKKEARRMDRFTQYAIVAAREAVKDAQLDINENTADRIGVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGATVTACATGTNSIGEAFKIVQRGDADAMITGGTEAPITHMAIAGFSASRALSTNDDIETACRPFQEGRDGFVMGEGAGILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPKDVQYLNAHGTSTPVGDLNEVKAIKNTFGEAAKHLKVSSTKSMTGHLLGATGGIEAIFSALSIKDSKVAPTIHAVTPDPECDLDIVPNEAQDLDITYAMSNSLGFGGHNAVLVFKKFEA", - "output": "3-oxoacyl- synthase activity ; fatty acid biosynthetic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MAKIIGIDLGTSNSAAAVMEGGKTTLIPSAEGTTLGGKAFPSYVAFTKDGQLLVGEPARRQAVTNPEGTINAFKRKMGTNYKYKVNGKEFTPQQLSAFILQKIKKDSEAYLGETITKAVITVPAYFNDDQRQATKDAGAIAGLEVVRLVNEPTAASLAYGIDKVGKEQKILVFDLGGGTLDVTIMEMGAEGTFEVLSTSGDTQLGGTDMDNALIDYIAEDFKKTNGIDLRNDKMAVQRLKEAAEKAKIELSNVLETDINLPFITADASGPKHLAMKFTRATLENLVRHIVERCKASIDQAVKDAKLTAETVTKIILVGGPTRMPIVQKFAEDHVGKKAERGIDPMECVCFGAAVQAAVLTGDVKDILLLDVTPLTLGLETMGGVRTSLIDRNTTVPAKRSQVFSTAADNQPSVEINVLQGERAMAKDNLSLGRFMLDGIPPAPRGVPQIEVTFDIDANGILHVSAKDKGTGKEQSIKISSSTKLSKDDIDKYVKEAEQYASEDVKRKEEIEVRNEADNLIYSVEKSLKDHGDKVSADERLIIEQSLTAAKDALKGSDVATIKSAKEALTTASHKLAEVVYKASQVQDTQGAAQGQSQGNPQQTADNRGKVVDAEIVDENKE", - "output": "ATP binding ; ATP-dependent protein folding chaperone ; unfolded protein binding" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MAATKWRDIDDLPKIPANYTALTPLWFLDRAAVVHPTRKSVIHGSREYTWRQTYDRCRRLASALADRSIGPGSTVAIIAPNIPAMYEAHFGVPMCGAVLNCVNIRLNAPTVAFLLSHSQSSVIMVDQEFFTLAEDSLRLMEEKAGSSFKRPLLIVIGDHTCAPESLNRALSKGAIEYEDFLATGDPNYPWQPPADEWQSIALGYTSGTTASPKGVVLHHRGAYIMALSNPLIWGMQDGAVYLWTLPMFHCNGWCFPWSLAVLSGTSICLRQVTAKEVYSMIAKYKVTHFCAAPVVLNAIVNAPKEDTILPLPHTVHVMTAGAAPPPSVLFSMNQKGFRVAHTYGLSETYGPSTVCAWKPEWDSLPPETQAKLNARQGVRYTGMEQLDVIDTQTGKPVPADGKTAGEIVFRGNMVMKGYLKNPEANKETFAGGWFHSGDIAVKHPDNYIEIKDRSKDVIISGGENISSVEVENVVYHHPAVLEASVVARPDERWQESPCAFVTLKSDYEKHDQNKLAQDIMKFCREKLPAYWVPKSVVFGPLPKTATGKIQKHILRTKAKEMGPVPRSRL", - "output": "cytosol ; peroxisome ; acetate-CoA ligase activity ; butyrate-CoA ligase activity ; medium-chain fatty acid-CoA ligase activity ; acetate metabolic process ; butyrate metabolic process ; glyoxylate cycle" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MSTAAARPGRRFTVGRSEDATHPDTIRAAISEFLATAIFVFAAEGSILSLGKLYQDMSTPGGLVAVSLAHALALAVAVAVAVNISGGHVNPAITFGALLGGRLSLIRALFYWLAQLLGAVVATLLLRLTTGGMRPPGFALASGVGDWHAVLLEATMTFGLMYAYYATVIDPKRGHVGTIAPLAVGFLLGANMLAGGPFDGAGMNPARVFGPALVGWRWRHHWVYWLGPFVGAGLAGLLYEYLVIPSADAAPHGGAHQPLAPEDY", - "output": "membrane ; vacuolar membrane ; water channel activity ; water transport" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MKKNVHPKYNEISAYCSCGNIINTKSTLNRNLNIDVCHLCHPFYTGTQRILDTRGRVNIFNKRFNLSINADFLPIDKKLNKK", - "output": "ribonucleoprotein complex ; ribosome ; metal ion binding ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MTQENIPVQPGTLDGERGLPTVNENGSGRTRKVLLFLFVVGFIVVLLLLLVFHMRGNAENNHHSDKTMVQTSTVPMRTFKLPPPPPPAPPEPPAPPPAPAMPIAEPAAAALSLPPLPDDTPAKDDVLDKSASALMVVTKSSGDTNAQTAGDTVVQTTNARIQALLDSQKNTKQDAGSLGTLLHGTQTDARMASLLRNRDFLLAKGSIINCALQTRLDSTVPGMAACVVTRNMYSDNGKVLLIERGSTISGEYDANVKQGMARIYVLWTRVKTPNGVVIDLDSPGADPLGGAGLPGYIDSHFWKRFGGALMLSTIETLGRYATQKVGGGGSNQINLNTGGGESTSNLASTALKDTINIPPTLYKNQGEEIGIYIARDLDFSSVYDVKPK", - "output": "plasma membrane" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MTTIVSVRRNGQVVVGGDGQVSLGNTVMKGNARKVRRLYNGKVLAGFAGGTADAFTLFELFERKLEMHQGHLLKSAVELAKDWRTDRALRKLEAMLIVADEKESLIITGIGDVVQPEEDQILAIGSGGNYALSAARALVENTELSAREIVEKSLKIAGDVCVFTNTNFTIEELPN", - "output": "HslUV protease complex ; proteasome core complex ; metal ion binding ; threonine-type endopeptidase activity ; proteolysis involved in protein catabolic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MLEFEQGFNHLATLKVIGVGGGGNNAVNRMIDHGMNNVEFIAINTDGQALNLSKAESKIQIGEKLTRGLGAGANPEIGKKAAEESREQIEDAIQGADMVFVTSGMGGGTGTGAAPVVAKIAKEMGALTVGVVTRPFSFEGRKRQTQAAAGVEAMKAAVDTLIVIPNDRLLDIVDKSTPMMEAFKEADNVLRQGVQGISDLIAVSGEVNLDFADVKTIMSNQGSALMGIGVSSGENRAVEAAKKAISSPLLETSIVGAQGVLMNITGGESLSLFEAQEAADIVQDAADEDVNMIFGTVINPELQDEIVVTVIATGFDDKPTSHGRKSGSTGFGTSVNTSSNATSKDESFTSNSSNAQATDSVSERTHTTKEDDIPSFIRNREERRSRRTRR", - "output": "cell division site ; cytoplasm ; GTP binding ; GTPase activity ; division septum assembly ; FtsZ-dependent cytokinesis ; protein polymerization" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MARMIHCAKLGKEAEGLDFPPLPGELGKRLYESVSKQAWQDWLKQQTMLINENRLNMADPRARQYLMKQTEKYFFGEGADQASGYVPPAQG", - "output": "iron ion binding" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MNIEKHLISLINDLCQISGVEVGQHFYWQLGGFQVHAQVLITSWVVIVLLSGLAFVTTRDLRTIPTGGQNFVEYVLEFIRDLTRTQIGEEEYRPWVPFIGTLFLFIFVSNWSGALFPWKIIQLPHGELAAPTNDINTTVALALLTSVAYFYAGLHKKGLSYFGRYIKPTPILLPINILEDFTKPLSLSFRLFGNILADELVVAVLISLVPLVVPIPMMFLGLFTSAIQALIFATLAAAYIGESMEGHH", - "output": "chloroplast thylakoid membrane ; plasma membrane ; proton-transporting ATP synthase complex, coupling factor F(o) ; proton-transporting ATP synthase activity, rotational mechanism" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "GNVAELTEVR", - "output": "defense response to bacterium ; killing of cells of another organism" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MRPNNRELNQVRPVKITRHYTRYAEGSVLVEFGETKVLCNATVEETVPRFLKGQQQGWVTAEYGMLPRSTHSRMQREAAKGKQGGRTMEIQRLIARSLRAVVDLKALGERTVTVDCDVIQADGGTRTAAITGACVALHDAMSKLVADGVLKENPMKGLVAAISVGIVDGNAVCDLEYVEDSNAETDMNVVMVEDGRLVEVQGTAEGEPFSHMELLQLLDLAHQGINQLLDAQRKALAL", - "output": "3'-5'-RNA exonuclease activity ; phosphate-dependent exonuclease activity ; tRNA binding ; rRNA catabolic process ; rRNA processing ; tRNA processing" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MSIRIIPQDELGSSEKRTADMIPPLLFPRLKNLYNRRAERLRELAENNPLDDYLRFAALIAHAQEVVLYDHPLEMDLTARIKEASAQGKPPLDIHVLPRDKHWQKLLMALIAELKPEMSGPALAVIENLEKASTQELEDMASALFASDFSSVSSDKAPFIWAALSLYWAQMANLIPGKARAEYGEQRQYCPVCGSMPVSSMVQIGTTQGLRYLHCNLCETEWHVVRVKCSNCEQSGKLHYWSLDDEQAAIKAESCDDCGTYLKILYQEKEPKVEAVADDLASLVLDARMEQEGYARSSINPFLFPGEGE", - "output": "cytoplasm" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MEGGSASGSASALSNDENLVVSCEDSSSPIGNELELGLTLSLGRKGYRDCRVYADDSSSSSSSSSLSRASVIAGIKRTADSMAATSGQVVGWPPIRTYRMNSMVNQAKASATEDPNLEISQAVNKNRSDSTKMRNSMFVKVTMDGIPIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSRTLETDGHMETPVKILPDGSSGLVLTYEDKEGDWMLVGDVPWGMFIGSVRRLRIMKTSEATGKAQMIL", - "output": "nucleus ; auxin-activated signaling pathway ; regulation of DNA-templated transcription" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MNYKDIINACILSGVFLLHSPSALADTPSVGVSKGQESLQPAAEGNLWQRLIRNVSLAWNSPHQELYIPVNTWHNRWTYDDEKIASYNERPWGVGYGKYRYDEDNNWHSVYAMAFMDSHNRVEPILGYGYQKMWIPGEREGWRFGAGFTASITARYEYHYIPLPLPLPLISIEYNRLSLQTTYIPGTYNNGNVLFTWIRWQF", - "output": "cell outer membrane ; O-palmitoyltransferase activity ; lipid A biosynthetic process" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MVEESELKYFVRIINTDLDGTQPVQLALTGIKGIGLHAALIIARRAGVDTRATMGLLGDEDVAAIEEQVKAYPASVPKWMVNRPVDVYSGEPKHLYGSDLSLAKEDDINLMKKMRCYRGIRHENGLKVRGQRTKATGRFGKIVGVSKRRN", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MSLYIGLMSGTSMDGIDAALLELPSNQLIHGITKQYSDDVRRNLDDLIIGNHLTLASICQLNTLIGREFAEAVRQLLIEIKVHPKEIQAIGSHGQTVCHDTSGNIPYTLQLGCGHTISSLTGITVVADFRTRDLVNGGQGAPFAPLYHQQIFSKVNESVAVVNIGGIANVTFIAKNQMTRGWDIGPGNCLMDAWIYKNKGALFDKNGVWASQGEVIHPLLEYLLQDPFFHLDSPKSIGKEYFSLSWLQKHLKPDYTPADIQATLLALTAHTIAETILNESGEIKQLYLCGGGAHNTHLKESLARLLPGITVKSIAELGISPDYLEAMMFAWLAAQTINQIPVNLASITGAKGIAILGAVYPIIKSY", - "output": "ATP binding ; kinase activity ; phosphotransferase activity, alcohol group as acceptor ; 1,6-anhydro-N-acetyl-beta-muramic acid catabolic process ; amino sugar metabolic process ; carbohydrate metabolic process ; peptidoglycan turnover ; phosphorylation" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MSLIDQAKEQMAKTVENTKENFSGIRTGRANPALLNGITVDYYGAPTPIKAVASIGVPEPRTLSVTPFDASQAGAVEKALRNSDLGISPNRDGNVIRLTMPELTEDRRKEYVKLAKGKAEDGKVAVRNIRRKTKETIDKAVKDGEMGEDEGDRLLKDLDKVTKSVTDEIDTLLETKQKEIMEV", - "output": "cytoplasm ; translational termination" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MRRYRIDSMKYEQRMNAGASGFDMSDWNNPYNASPPSSRGGDDDASSVNHSRPRRSRLDNDIPQPRRPILIQPARPVSQKSNRQGTGMSNGSRGLNSTFNGYDRTYSRYHQNSSRGPSEGFSGAPSARNASGYASDYANSRAGVGLLPNNHREPVRPRSTAAERYANASSMRNGFVYDSGESDKTSEELEEDEEEEEVRNFYMEGRAQGSRSVTNTLASEVYNSESESYYYGVVKLGSAIVDHVFRTMPPPEKYYKMPPIDRVAYVFYCAVNNKPYNNIDEFHVIFNREFYSYRGYGDSKDLALFKVCKRMQEEFSLKQLEADRLAYEKARQEAAESEKLDFNQHKIEEREEPKLNISQPEEVLSNGPLHYHSCLQFATIGVGGKLVIIKPAGTIDSITGHVLSTSSVHVDDLKTFLHFDEQSGKVIESVQNFKGPLIAGQTPTHSVRLYIQRQIDALRQIRNAGDVKKSEVVDALLVWQLLEIMVQQHGRVTGPDVATLLTNASEELGEKTGISSNGTSESGSKFEAKERFNKYLLGGHINEAVESAITDGLYADAMTLIRRLHPNDAKKIEEIEARFMNLRSIDDPFATLVAVSSDQPPPILTNSAFDDDNNWKRHAAIVLANLNSQTAMQTIYHLGLLLAKRERNCAADFCLLVVCILAGYDPFIPVAHDGDETSRKHIGLVHSGSNLLNRVDGLSGTAGFSFTDLHATDIFDYALRLGNNNVDSPLAKSIDYQLARIEYAKKLSSFGGFATDAFRYCTEVARSLWMYVAAFDKNAMFDLCDLAESLQYMAAATPDESGWITTMRGMLGAAPVQESQQHVPQPQPVENKSISSEAKKWHDEHQAPLEIGSRNDQQHNDKTVEKPIAPGRASLPPPTLVTESSSESTFTDKSDSSVTVAASASRTSTLTSSTLPPPPSLPKTIEKPISTPPPISKNVVPEMTPPAIVKPPMPTLSMPIPPVSTPIMVSPQPIPIPKPVDASIAKSPRSELDDLWDTSPPSNQTSYPPAPRNIQPSYSPAPNFANPTAPSVPTPPPAVSSAPVLQQATLGQASIPNAKTTAPPVPQKQPELALNERKASKGWFGSIKEKVIKSIPSANQMILPDDSKPSIVWDPVQKRYVGAGVEEEVVAAPPPVMSAPHLMGGGPDSNKSSTNSLRSARSGVGSRYLQSGMATSQAPAMDTGMPPMMPPTMPMSFSFMPAPTEDDSSEYVDPFSGEPTAPSESLSKQNND", - "output": "endoplasmic reticulum exit site ; endoplasmic reticulum-Golgi intermediate compartment ; ER to Golgi transport vesicle membrane ; autophagy ; COPII vesicle coating ; endoplasmic reticulum to Golgi vesicle-mediated transport ; Golgi organization ; protein localization to endoplasmic reticulum exit site" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MAAKRKAAAMNAVDDEPVDPSDELAFYCLGGGNEVGRSCHIIQYKGKTVMLDAGMHPAKEGFSALPFFDEFDLSTVDILLISHFHVDHSSALPYVLSKTNFKGRVFMTHATKAIYKWLIQDNVRVNNTASSSDQRTTLYTEHDHLSTLPLIETIDFNTTHTINSIRITPYPAGHVLGAAMFLISIAGLNILFTGDYSREEDRHLIPATVPRGVKIDVLITESTFGISSNPPRLEREAALMKSITGVLNRGGRVLMPVFALGRAQELLLILEEYWETHPELQKIPIYYIGNTARRCMVVYQTYIGAMNDNIKRLFRQRMAEAEASGDKSVSAGPWDFKYVRSLRSLERFDDVGGCVMLASPGMLQTGTSRELLERWAPNERNGVVMTGYSVEGTMAKQLLNEPDQIHAVMSRAATGMGRTRMNGNDEEQKIMIPRRCTVDEISFAAHVDGVENRNFIEEVSAPVVILVHGEKHQMMRLKSKLLSLNAEKTVKVKVYTPANCEEVRIPFRKDKIAKVVGKLAQTTLPTDNEDGDGPLMAGVLVQNGFDLSLMAPDDLREYAGLATTTITCKQHITLSSASMDLIKWALEGTFGAIEEIGTDEDAEKEDQQSESEEKQRMKEEADEEIPMEKPQAYLVMGCVVIRYHPRTREVELQWEGNMMNDGIADAVMAVLLTVESSPASVKQSAKHNKHHHHHHHDETDTLKFLNPHAAQDAEERFARLLMMLEAQFGSDIAPIERPRVPSSTESATTTTNGNGNSKSDSEQLSSLESKTDGATPQDPDTLSELEAAELSRLHALGIPVPGIEIKVDKHVARVWLEDLEVECANAVLRDRVRVVIERAVETVASMWSVGRSSKTITNGGGKEIAGTGADDVASKPGLEVAARA", - "output": "mRNA cleavage and polyadenylation specificity factor complex ; 5'-3' RNA exonuclease activity ; metal ion binding ; RNA binding ; RNA endonuclease activity ; mRNA polyadenylation ; secondary metabolite biosynthetic process" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MSVMDALFLLATEEVGHFGINTNLLETNVINLAILIGVLVYFGRGVLGKTLGDRQKQIATAIAEAEERQKVAAARLAEAQQKLTQAKQEAQRIREDALTRAKAVKEEIIAQAKREIERLQETASQDTSAATERAIAEIRERIAAMALAEAENQLKARLSQNPDLQRTLIDRSIALLGGK", - "output": "plasma membrane-derived thylakoid membrane ; proton-transporting ATP synthase complex, coupling factor F(o) ; proton-transporting ATP synthase activity, rotational mechanism" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "KHGSINCRLPPERGPCRGNITKYYYHNESRTCRTFSYGGCEGNSNNFRNRHYCMKYCARKRHGWLGTGWI", - "output": "extracellular region ; host cell membrane ; potassium channel regulator activity ; serine-type endopeptidase inhibitor activity ; toxin activity ; envenomation resulting in negative regulation of voltage-gated potassium channel activity in another organism ; negative regulation of peptidase activity" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MESPHLSVLKNEVLEIFAPLSEGYFIDCTLGFGGHSEAILKAHPKLSLIGIDQDPHALEFSQKRLAPFKDRFSFREGRFSEVLPTLKELPIAGILADIGVSSLQLDDSSRGFSFHSERLDMRMNPNAQLSALEVVNSYPQDRLERIFKEYGEIKESKKLVSLISEERKKGRITSAEALSRLIERHFKRVGNIHPATLAFQAIRIEVNDELGEIGRALQTIGEIAKGRVSIISFHSLEDRLVKNFFKEWSNSCLCPPEAFRCTCGNNHEKGQILTKKPLVATPEESKANPRSRSAKMRAFEFKS", - "output": "cytoplasm ; rRNA (cytosine-N4-)-methyltransferase activity ; rRNA base methylation" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MSRIGKRPIALPAKVEVQIEGQQISVKGPKGELSRSLPPLIAVHQEAQTLKVSRVNESRPARQLHGLCRTLVANMVDGVSRGFERRLELVGVGYRASTQGNKLILNVGYSHPVEIPFPPGIQIAVEGNNVIVVSGIDKELVGNTAARIRAVRPPEPYKGKGIRYVGEQVRRKAGKSGKAKK", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MADPKGSTSKDGLDDWCIVEAECSDIENDLEELFDRDTDSDISELLDDNDDLDQGNSRELFHQQESKESEEHLQKLKRKYLSPQAIAQLSPRLESITLSPQQKSKRRLFAEQDSGLELTLTNEAEDVSSEVEVPALDSQPVAEAQIGTVDIHYTELLRASNNKAILMAKFKEAFGVGFNDLTRQFKSYKTCCNHWVLSVYAVHDDLLESSKKLLQQHCDYVWIRGIAAMSLFLLCFKVGKNRGTVHKLMTSMLNVHEKQILSEPPKLRNVAAALFWYKGAMGSGTFTYGPYPDWMAHQTIVGHQSTEANAFDMSVMVQWAFDNNYLDEADIAYQYAKLAPEDSNAVAWLAHNNQARFVRECASMVRFYKKGQMKEMSMSEWIHTRITEVEGEGHWSTIAKFLRYQQVNFIMFLAALKDMLHSVPKRNCILIYGPPNTGKSAFTMSLIRVLRGRVLSFVNSKSQFWLQPMSECKIALIDDVTDPCWLYMDTYLRNGLDGHYVSLDCKHKAPIQTKFPALLLTSNINVHNEITYRYLHSRIKGFEFPNPFPMKADNTPEFELTDQSWKSFFTRLWNQLELSDQEDEGDNGESQRPFQCSARSANEHL", - "output": "host cell nucleus ; ATP binding ; ATP hydrolysis activity ; DNA binding ; DNA helicase activity ; DNA replication" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MSGLFITFEGGEGAGKSTQIALLASHLRNHGFDPVITREPGGSPGAEAIRHVILSGNAETYGPAMEALLFAAARADHVDQLIRPALAEGRIVLCDRFIDSSRAYQGVTGNLDATYMAAIERIAIDGAMPDLTLVLDICAERGLSRAGKRRGSDTADRFEKEDIAVHEARRQAFLEIARQEPARCKVIDADRSQEKIADEIRSVVDTILTEKGLL", - "output": "ATP binding ; thymidylate kinase activity ; dTDP biosynthetic process ; dTTP biosynthetic process ; phosphorylation" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MATYSSNDFRAGLKIMMDGEPYAVESSEFVKPGKGQAFARVKLRRLLTGSRVEKTFKSTDSAEGADVVDMNLTYLYNDGEFWHFMNNETFEQLAADAKAVGDNAKWLLDQAECIVTLWNGQPISVTPPNFVELEIVDTDPGLKGDTAGTGGKPATLSTGAVVKVPLFVQIGEVIKVDTRSGEYVSRVK", - "output": "cytosol ; translation elongation factor activity" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MADPSLNNPVVIQATRLDASILPRNVFSKSYLLYVIAQGTDVGAIAGKANEAGQGAYDAQVKNDEQDVELADHEARIKQLRIDVDDHESRITANTKAITALNVRVTTAEGEIASLQTNVSALDGRVTTAENNISALQADYVSKTATTSQSLASPLNVTTSYSVGGKKVLGARQTGWTAATGTANKGVFDADLTFAVSDTYTQSEIQAIANALITERRRTKALEDALRAHGLID", - "output": "virus tail ; pore-mediated entry of viral genome into host cell ; viral genome ejection through host cell envelope, short tail mechanism" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MIMSLSILYILPEILLALGVIVVMFSGLFLHGKIRNINYIFFQVFTLLALIATFAKEYLIQTTGLVFEGQVVFSGFAYTLQLVILVLAVFVALYSRDYVKDRKISDGDFYTLLMLCVLGAMVLTAAHSLVTIYVGLELLSLPMYALIAIYRDSGKGLEAAIKYFVLGAIASALLLFGMSFVYGMTGKLDITEIANVLAHGNFAGLQQQFLLVYLVMMIATFLFKLGAFPFHMWLPDVYQGAPNAVANIVATIPKVAAFAMLVNILFVGFPSLKDSWIYLFRIIGILSIFFGSLVALSQTNVKRLLGYSTVSQIGFVLLATTLNPQGYALTAASFYVIVYLFTTLAVFGVLTTISVGGYEVQDLNDLKGFNTKDSWLAFILLIVLFSMAGIPPFGGFIAKLFVVMGLINDGNYFLACFVLFMAVIASFYYVRVIKTMYFDDPDNDETVKPPLTSLIALSINGLVLLFLGIMPMLLLGVLTQVTNVI", - "output": "plasma membrane ; NADH dehydrogenase (ubiquinone) activity ; quinone binding ; ATP synthesis coupled electron transport" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MQVLVNKIWYEGHPLRWLLLPFSVLFALITAIRRSLFRLGLKSQTPLPVPVIVVGNITVGGSGKTPTVIYLIELLRQQGFNPGVISRGYGADIQGVKVVTAADSAASVGDEPAMIVARTGVPMVVGAKRVDTAKALLAQFAVDVIICDDGLQHYALGRDIELVVIDGKRGLGNRHLLPAGPLREGAWRLNQVDFVVVNGGPAQANQYEMQLSPSAVLPVNPKAVAVFDPTQPVVAMAGIGHPARFFETLTQQGFQLALSHGFDDHQAYDKEVLCELAASRPLMMTEKDAVKCRDFAQENWWYLAVDAKLSPQFDQQLLSRVRSVAAAKQGKSHGV", - "output": "ATP binding ; tetraacyldisaccharide 4'-kinase activity ; lipid A biosynthetic process ; phosphorylation" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MDTLATSINQFALELSKKLAESAQGKNIFFSSWSISTSLAMVYLGTKGTTAAQMGQVLQFNRDQGVKSSPESEKKRKMEFNSSNSEEIHSDFHTLISEILKPNDDYLLKTANAIYGEKTYPFHNKYLEDMKTYFGAEPQSVNFVEASDQIRKEINSWVERQTEGKIQNLLPDDSVDSTTRMILVNALYFKGIWEHQFLVQNTTEKPFRINETTSKPVQMMFMKKKLQIFHIEKPQAVGLQLYYKSRDLSLLILLPEDINGLVQLEKDITYEKLNEWTSADMMELYEVQLHLPKFKLEDSYDLKSTLSSMGMSDAFSQSKADFSGMSSARNLFLSNVFHKAFVEINEQGTEAAAGTGSEIESRIRVPSIEFNANHPFLFFIRHNKTNSILFYGRLCSP", - "output": "cytosol ; extracellular space ; nucleoplasm ; serine-type endopeptidase inhibitor activity ; negative regulation of peptidase activity" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MSSLVTPQHAEELSTGARQLGVELSAQQHELLLGYLALLIKWNKAYNLTAVRDPDEMVSRHLLDSLSVMPFIHNDTQRWLDVGSGGGMPGIPLAILHPHKQVTVLDSNGKKTRFLTQVKMELKLDNLTVIHSRVEEVQPEQPFCGIISRAFSSMENFTNWTRHLGDSRTQWLAMKGLHPADELVALPADFTVESEQALTVPGCQGQRHLLILRRKA", - "output": "cytoplasm ; rRNA (guanine-N7-)-methyltransferase activity" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MEEIVVHGGQRLTGNVHIEGAKNAVLPILAASLLASSGQTHLSNVPVLSDVFTMNNVLKFLNTKIDFDEINKTIDIDASRQLSSEAPFQYVSKMRASIVVMGPLLARLGHAKVAMPGGCAIGSRPIDLHLKGLNALGAEIERHDGYVEATANQLHGAAIYLDFPSVGATQNIMMAATLADGITTMENVAREPEIVDLANYLNQMGAKVTGAGTETIRIEGVKAMHGCDHSIVQDRIEAGTFMVAAAVTQGNVLVEDAIAEHNKPLISKMREMGVTVTEEPAGIRVIGPEILKPTSVKTMPHPGFPTDMQPQMTILQLCAQGTSLLTETVFENRFMHLDELRRMNADFKVEGRSVIMYGPTDFNGAQVTATDLRAAAALVIAGLVSRGYTEVTNLKYLDRGYFNFHGKLAKLGAEIKRVDVPDGTVYALNPDFANEAAE", - "output": "cytoplasm ; UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity ; cell cycle ; cell division ; cell wall organization ; peptidoglycan biosynthetic process ; regulation of cell shape ; UDP-N-acetylgalactosamine biosynthetic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MAEYTLPDLDYDYGALEPHISGQINELHHSKHHATYVKGVNDAIAKLEEARANGDHAAIFLNEKNLAFHLGGHINHSIWWKNLSPNGGDKPTGELAAAIDDQFGSFDKFQAQFTAAANGLQGSGWAVLGYDSLGGRLLTFQLYDQQANVPLGIIPLLQVDMWEHAFYLQYKNVKADYVKAFWNVVNWDDVQNRFAAATSKTSGLIFG", - "output": "extracellular region ; metal ion binding ; superoxide dismutase activity" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MKAYWYDNIPGDQRLPHDSGRTVDASYLATIGVLYRHCPAISAVDDLARDRGYKNRDEIIISPEKMGDVYEDKVRMFFNEHLHEDEEIRYIVDGEGFFDVRSKDDEWVRIRLGKGDLIVLPAGIYHRFTTDENNYVKAMRLFQDEPKWTPLNRAPELDANQHRKTYVESHISSSTA", - "output": "cytoplasm ; nucleus ; acireductone dioxygenase (Ni2+-requiring) activity ; acireductone dioxygenase activity ; iron ion binding ; nickel cation binding ; L-methionine salvage from methylthioadenosine" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MKQIFIGIIRFYQKFISPMTPPTCRFYPTCSHYGLEAFQKHGALKGFWLTCKRILKCHPFHPGGFDPVPDKKDDKVNS", - "output": "plasma membrane" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MSTLEENYQYCHQIMKDYSKSFSYAFDMLPEQQRRAIWAIYAVCRIVDDSIDVHQDVEYLHKINRDVKAIEHQTTTTFESDDRIMTAFADAATHFQMNFQALYDLIDTVEADQHFEMFETDRGLLDYCYGVAGTVGVLLIPILATPPSDEAYEYGKQLGEALQLTNILRDVGEDYRNGRIYFSKARLNEFNVSIADEIERDQLSDNYIKIWEFYATLADNNYDMVLNHLDVYNEESRMIIELAAQVYRGILTEVRKADYSLKDRAYVSKWKKHKIYRNLKKKYKD", - "output": "farnesyltranstransferase activity ; metal ion binding ; carotenoid biosynthetic process" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MSANDFKPETWTSSANEALRVSIVGENAVQFSPLFTYPIYGDSEKIYGYKDLIIHLAFDSVTFKPYVNVKYSAKLGDDNIVDVEKKLLSFLPKDDVIVRDEAKWVDCFAEERKTHNLSDVFEKVSEYSLNGEEFVVYKSSLVDDFARRMHRRVQIFSLLFIEAANYIDETDPSWQIYWLLNKKTKELIGFVTTYKYWHYLGAKSFDEDIDKKFRAKISQFLIFPPYQNKGHGSCLYEAIIQSWLEDKSITEITVEDPNEAFDDLRDRNDIQRLRKLGYDAVFQKHSDLSDEFLESSRKSLKLEERQFNRLVEMLLLLNNSPSFELKVKNRLYIKNYDALDQTDPEKAREALQNSFILVKDDYRRIIESINKSQG", - "output": "chromosome, telomeric region ; cytoplasm ; histone acetyltransferase complex ; nucleus ; chromatin binding ; histone acetyltransferase activity ; histone binding ; histone H4 acetyltransferase activity ; DNA repair ; histone acetylation ; subtelomeric heterochromatin formation" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MSESLHLTRNGPILEITLDRPKANAIDAKTSFAMGEAFLNFRDDPELRVAIITGGGEKFFSAGWDLKAAAEGEAPDADFGPGGFAGLTEIFDLDKPVIAAVNGYAFGGGFELALAADFIVCAENASFALPEAKLGIVPDSGGVLRLPKLLPPAIVNEMVMTGRRMSAEEALRWGIVNRVVSQSELMESARELAQQLVNSAPLAIAALKEIYRATSEMPVEEGYRYIRSGVLKHYPSVLHSEDALEGPQAFAEKRAPVWKGR", - "output": "hydro-lyase activity ; L-carnitine CoA-transferase activity ; carnitine metabolic process" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MSDISKASLPKAIFLMGPTASGKTALAIELRKILPVELISVDSALIYKGMDIGTAKPNAEELLAVPHRLLDIRDPSQAYSAADFRRDALAEMADITAAGRIPLLVGGTMLYFKALLEGLSPLPSADPEVRARIEQQAAEQGWESLHRQLQEVDPVAAARIHPNDPQRLSRALEVFFISGKTLTELTQTSGDALPYQVHQFAIAPASRELLHQRIEQRFHQMLASGFEAEVRALFARGDLHTDLPSIRCVGYRQMWSYLEGEISYDEMVYRGVCATRQLAKRQITWLRGWEGVHWLDSEKPEQARDEVLQVVGAIAG", - "output": "ATP binding ; tRNA dimethylallyltransferase activity ; tRNA processing" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MNDVWDELQWRGLVAHSTDEAALQEALQTGPLTYYVGFDPTAASLHVGHLVQVLTAKRLQQAGHRPLILVGGATGLVGDPRPSAERTMNDPSVVAGWVTGLQGQIAPFLDFDGPAAATMVNNLDWTQSMSTIEFLRDVGKHFSVNRMLDREAVSKRLATTGISFTEFSYVLLQSNDYLQLHRRHGCTLQLGGSDQWGNITAGCELVRRVDQRTVHALATPLLTKADGTKFGKTESGAVWLDPELTSPYAFHQFWLNAEDAKVVDYLKAFSFRPREEIEELGRQAVENPRARAAQRALAHEVTALVHGEEAAVAVEAAAAALFGGSDLEAIDERILRGALAELPTAAPADRDVRLAQLFADTGLAPSLSGARRTIGEGGAYVNNIKLTDPEATLRDVQLLHGRYAVLRRGKKSLASVAVPLPQ", - "output": "cytoplasm ; ATP binding ; RNA binding ; tyrosine-tRNA ligase activity ; tyrosyl-tRNA aminoacylation" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MSSANNISGAPETGDFTFTQHFNVSATPSEFLASIWPYRHMMWIGPMLLFLAPRFYNTLKNTAFSRAYHMPYSILALHVFISFVDLANYHTQVFLANGAIHPASQIDALICIVQCWTSLYITAQHHLLPKIAMEVTRATFHCMSVQRLFATAMAIRTGDPRWHEASIMLLNNFIWARLLIAYCKMGRFSWKQRYGVGIVGSHLLGMWNGTYPHGIAIYCGLMVVLLNIDGWAKGRDSSVARALRYLGLATPADWYIKVGIDPPTKSAEKKEA", - "output": "membrane ; antibiotic biosynthetic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MATYARSVERLIAELSRLPTIGPRSAQRIAFHIIRTRKEEALALAEALREVKERIRPCRRCFNLTEGEECDICRDPRRDRSVICVVEDPYDIGPIERTGEYRGLYHVLGGALSPLDGVEPEDLRIAELVERVRSEGTRELILATNPNTTGEATAMFIAQEVRELPVRVTALASGLPVGGDLEYADEVTLGRAFAGRREL", - "output": "DNA binding ; metal ion binding ; DNA recombination ; DNA repair" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MDDNKKKALAAALGQIERQFGKGAVMRMGDHDRQAIPAISTGSLGLDIALGIGGLPKGRIVEIYGPESSGKTTLTLSVIAQAQKMGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGEQALEITDMLVRSNAIDVIVVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIKNANCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSETRVKVVKNKVAPPFRQAEFQILYGKGIYLNGEIVDLAVLHGFVEKSGAWYSYQGSKIGQGKANSAKFLADNPEICKALEKQIRDKLLTPGVDTKAVGSREAAVADDMAEADADI", - "output": "cytoplasm ; ATP binding ; ATP-dependent DNA damage sensor activity ; damaged DNA binding ; single-stranded DNA binding ; DNA recombination ; DNA repair ; SOS response" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MSKHTNIPMFRIGIGYDVHRFDNINNDDSNTSITICGIEINYHKKIIAHSDGDVGLHALADAILGAVGCGSIGQHFPNTDQKWKNAKSSHFVIEAQKKAQERGYIISNADIIIICEQPKIMPYALEMQHYIAQFTSIDPSFINIKATTTEKLGAIGRNEGIAAQAIVLCSQQY", - "output": "2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity ; metal ion binding ; isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway ; terpenoid biosynthetic process" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MAKLTKRMRVIREKVDATKQYDINEAIALLKELATAKFVESVDVAVNLGIDARKSDQNVRGATVLPHGTGRSVRVAVFTQGANAEAAKAAGAELVGMEDLADQIKKGEMNFDVVIASPDAMRVVGQLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKAGQVRYRNDKNGIIHTTIGKVDFDADKLKENLEALLVALKKAKPTQAKGVYIKKVSISTTMGAGVAVDQAGLSASVN", - "output": "large ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; tRNA binding ; regulation of translation ; translation" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MTIIRKKHPLIKIINHSFIDLPAPSNISSWWNFGSLLGLCLIIQILTGLFLAMHYTSDTATAFSSVTHICRDVNYGWLIRYMHANGASMFFICLFLHVGRGIYYGSYNMIETWNMGIVLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVLVHLLFLHETGSNNPTGLNSDADKIPFHPYYTIKDFLGVLILLMAFMILTLFFPDILGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSIVILAFMPLLHTSKQRALTFRPITQTMYWILVADLLVLTWIGGQPVEYPFIIIGQTASIAYFAIIVILMPMAGMFENNIMDLD", - "output": "mitochondrial inner membrane ; respiratory chain complex III ; metal ion binding ; ubiquinol-cytochrome-c reductase activity ; respiratory electron transport chain" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MSTTFCSSVSMQATSLAATTRISFQKPALVSRTNLSFNLSRSIPTRLSVSCAAKPETVEKVSKIVKKQLSLKDDQNVVAETKFADLGADSLDTVEIVMGLEEEFHIEMAEEKAQKITTVEEAAELIDELVQAKK", - "output": "chloroplast ; acyl carrier activity ; phosphopantetheine binding" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MTSTLHRTPLATAGLALVVALGGCGGGGGDSRETPPYVPKATTVDATTPAPAAEPLTIASPMFADGAPIPVQFSCKGANVAPPLTWSSPAGAAELALVVDDPDAVGGLYVHWIVTGIAPGSGSTADGQTPAGGHSVPNSGGRQGYFGPCPPAGTGTHHYRFTLYHLPVALQLPPGATGVQAAQAIAQAASGQARLVGTFEG", - "output": "cell surface ; extracellular region ; peptidoglycan-based cell wall ; plasma membrane" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MANWLVLAEQVLGGHELTDEEALAILDCPDEELLLLLQGAYRIRSAYYGNKVKLNMIINAKSGLCPENCGYCSQSAVSTAPVKTYKMVDKETLLRGAEEAHRLRIGTYCIVASGRGPSDKEIDTVVSAVKEIKERFGLKVCACLGILKPEQAARLKEAGVDRYNHNINTSKQHHPNITTSHTYDDRVRTVETVKEAGLSPCSGVIIGMKETKRDVVDMARSLRALDADSIPVNFLHAIDGTPLAGTNELNPRYCLKVLALFRYMNPTKEIRIAGGREVNLRSLQPLGLYAANSIFVGDYLTTAGQEKSADYQMLEDLGFEIEFAPAPQAGVVS", - "output": "2 iron, 2 sulfur cluster binding ; 4 iron, 4 sulfur cluster binding ; biotin synthase activity ; iron ion binding ; biotin biosynthetic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MGPIGAEADENQTVEEMKMEPSGPGHTTPRGELAPDSEPELKDSTKLIEVQIILILAYCSIILLGVVGNSLVIHVVIKFKSMRTVTNFFIANLAVADLLVNTLCLPFTLTYTLMGEWKMGPVLCHLVPYAQGLAVQVSTITLTVIALDRHRCIVYHLESKISKRISFLIIGLAWGISALLASPLAIFREYSLIEIIPDFEIVACTEKWPGEEKSIYGTVYSLSSLLILYVLPLGIISFSYARIWSKLKNHVSPGGVNDHYHQRRQKTTKMLVCVVVVFAVSWLPLHAFQLAVDIDSQVLDLKEYKLIFTVFHIIAMCSTFANPLLYGWMNSNYRKAFLSAFRCEQRLDAIHSEVSMTSKAKKNLEATKNGGPDDSFTEATNV", - "output": "plasma membrane ; neuropeptide Y receptor activity" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MKALWVALVVTLLAGCRAEVEPEPEPEVQLGQEQPEWQGSQPWELALGRLWDYLRWVQTLSDQVQEELLSTQVTQELTALMEETMKEVKAYKAELEEQLSPVAQETRARLSKELQAAQARLGTDMEDLRSRLAHYRNEVQAMLGQTTDELRNRLASHLRKLRKRLLRDAEDLQKRLAVYRAGAVEGAERSVSALRERLGPLVEQGRLGTATTSTLGSQPLRERAEAWGQKLRGRLEAVGARAQDRLDKMREQLEEVRAKVEEQASQMRLQAETFQARLKGWFQPLVEDLQRQWAGLVEKVQQLAVGTTPTPAASKNQ", - "output": "chylomicron ; extracellular exosome ; extracellular matrix ; extracellular space ; high-density lipoprotein particle ; intermediate-density lipoprotein particle ; low-density lipoprotein particle ; multivesicular body, internal vesicle ; very-low-density lipoprotein particle ; heparan sulfate proteoglycan binding ; heparin binding ; identical protein binding ; lipid binding ; low-density lipoprotein particle receptor binding ; cholesterol efflux ; chylomicron remnant clearance ; high-density lipoprotein particle assembly ; intermediate-density lipoprotein particle clearance ; lipoprotein biosynthetic process ; melanosome organization ; negative regulation of amyloid fibril formation ; positive regulation of amyloid-beta clearance ; triglyceride-rich lipoprotein particle clearance ; very-low-density lipoprotein particle clearance" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MLRTMLKSKIHRATVTQADLHYVGSVTVDQDLLDAADLLPGEQVAIVDINNGSRLETYVIPGKRGSGVIGINGAAAHLVHTGDLVILIAYGQMDDAEARAYQPRVVHVDSANQVIDLNADTSTAAAGTAGAPVPNPLADPA", - "output": "cytoplasm ; aspartate 1-decarboxylase activity ; alanine biosynthetic process ; pantothenate biosynthetic process" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MSERIEWLEDGTAGGSPYSPRFGDRYRSELGGLEQAREVFLKGCGLPNAWAGQPQWCVLETGFGLGLNFLVTWAAWKADPLRPRLLHFVSTEAYPASADDVLRSALTHPELIPFAEQLKRQLWGLLPGVHRLVFEGGQVLLTLCIGDTKAMLREPSFEADSVYLDGFSPQRNPDIWDVHTFKAVARCCRRGTRIATWTIARSVRDALAQCGFVVKKVPGTPPKRDNLQGEYQPAWEVKKSRITPERKAPARCIVIGAGLAGSAVAASLARRGWQVTVLDAASTPAAGASGLPAGVLAPHVSPDDSLLSRLSRSGIRAMLQQADALLQTNIDWSPTGVLEHCVEHARQLPAAWHPGQALADAAGDWTRPATSEQLKHCGLSPETPALWHVQAGWIKPARLVQAWLSSPGVSWHGNAAVSQLVRQAGAWQALDATGNELASAELVVLAAGHGSRALSEIASPQAGRPLALQAIRGQASWGLHAPGTEQAMPAFPVNGHGSLVPRVPLEQGLAWVTGSSFERDNTSPQLRPEDEQHNFGKLKTLLPAAAQALTAQFESGQVRGWTGVRCATPSRLPALGPLENAQDVWVCSGMGSRGLTFAALCAELLAARLHGEPLPVELRQADALLPQYATRLQPSGS", - "output": "cytoplasm ; flavin adenine dinucleotide binding ; oxidoreductase activity, acting on the CH-NH group of donors ; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity ; tRNA wobble base modification" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MDLYAVWGNPIAQSKSPLIQNKLAAQTHQTMEYIAKLGDLDAFEQQLLAFFEEGAKGCNITSPFKERAYQLADEYSQRAKLAEACNTLKKLDDGKLYADNTDGIGLVTDLQRLNWLRPNQHVLILGAGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDSIPLQTYDLVINATSAGLSGGTASVDAEILKLGSAFYDMQYAKGTDTPFIALCKSLGLTNVSDGFGMLVAQAAHSFHLWRGVMPDFVSVYEQLKKAML", - "output": "cytosol ; NADP binding ; shikimate 3-dehydrogenase (NADP+) activity ; amino acid biosynthetic process ; aromatic amino acid family biosynthetic process ; chorismate biosynthetic process ; shikimate metabolic process" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MTLSVSARHRLGTFELDASFTSEGGVTALFGRSGSGKTSMIRIIAGLLRPDEGQISLDGEVLADSGKRLFLPAHKRRFGYVFQEARLFPHLSVAQNLRYGRWFTTGKDTNANDDRIIDMLGISHLLQRRPNRLSGGEKQRVAIGRALLSSPRLLLMDEPLASLDEQRKAEIIPYLERLRDETKIPIVYVSHSIQEVARLADRVVVMKDGKVEAEGKAAEVLSRPDFSTYLERREAGSILSGNIESFDERHGLAAVRLNAALLQVPAKKATAGTPARVLIPARDVMLALVKPEGLSALNILEGHVTGISESEDGMVTIQMDCGGDIIQSRITDLSRERLHLEPGKPVHAIIKSAALDPY", - "output": "plasma membrane ; ABC-type molybdate transporter activity ; ATP binding ; ATP hydrolysis activity" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MFTSNTDDDRGQVGIGTLIVFIAMVLVAAIAAGVLINTAGMLQTQAEATGEESTDQVSDRLEISSTSGDFSDVNTLGAGEGEELEVTVEAGDATAAGEEVVIRVATSAESGFEDSKAIELPDEAGDPTTVTLDNLPSIGGALVTVDGENVQAVTEDSVDLTQGDPSVSFNVDELSDDSESTIGLQLTADAGNNFWDEIAEDNIEDTVTVQLTDYERTEAEITNVNNWGSDDAEIEWEATVPADEGDYAVEVIGFDSARMLPISTNEVASTTEDPELGETDTQIDNLQFSVATAPGSDAIDLEETSVQFIGDQGEETVTITDRNVENIQGVDGNVLTDNSDRALVSFDPVADIDGFNRIEESEDLTVIFTTASGASTETELRIPSTFLEGDESVRL", - "output": "archaeal-type flagellum ; structural molecule activity ; archaeal or bacterial-type flagellum-dependent cell motility" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MSEKATEIANLLSPTVDSLGVELLGVEYLPAPGGATLRLYIDVPLAEQPERVINVDDCERVSREVSAQLDVEDPISGHYTLEVSSPGVDRPLFTLEQFARHAGESTKIVLKLAQDGRRRFQGEILRIDAEAGAVVFAIDGKDVQIGFDNIDKARILPDWVALGLAPQKPNKPGPKKTGHEKKKPSNESAAGKPRAE", - "output": "cytoplasm ; ribosomal small subunit biogenesis" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MDATPNAVELTVDNAWFIAETIGAGTFPWVLAITMPYSDAAQRGAFVDRQRDELTRMGLLSPQGVINPAVADWIKVVCFPDRWLDLRYVGPASADGACELLRGIVALRTGTGKTSNKTGNGVVALRNAQLVTFTAMDIDDPRALVPILGVGLAHRPPARFDEFSLPTRVGARADERLRSGVPLGEVVDYLGIPASARPVVESVFSGPRSYVEIVAGCNRDGRHTTTEVGLSIVDTSAGRVLVSPSRAFDGEWVSTFSPGTPFAIAVAIQTLTACLPDGQWFPGQRVSRDFSTQSS", - "output": "cytoplasm" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MRFNIDEWEPKTTIGRMVKEGQITDIDYILDNNLPILEPEIVDALLPDLEEKVLDVKLVQRMHKSGRRARFRATVVVGNRNGYVGVGKGKAKEVGPAIRKAIAQAKKNIIRVKRGCGSWECGCGTPHSIPYKGYGKCGSTAIEILPAPKGVGLVAGDVAKAVLGLAGIKDVWTKTFGETRTTYNFAMATFEALKSLNFTRTMEKHKEKLGIVEGRVL", - "output": "cytosolic small ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MATTLTTDLRLSIAHQTRFGLRLASAISSDPESAATNVAFSPVSLHVALSLVAAGARGATRDQLVAVLGGGGAGEAEALQSLAEQVVQFVLADASINSGPRIAFANGVFVDASLSLKPSFQELAVCNYKSEVQSVDFKTKAPEAASQVNSWVKNVTAGLIEEILPAGSIDNTTRLVLGNALYFKGLWTKKFDESKTKYDDFHLLNGSTVQTPFMSSTNKQYLSSSDGLKVLKLPYQHGGDNRQFSMYILLPEAHDGLSRLAQKLSTEPDFLENRIPTEEVEVGQFMLPKFKISFGFEANKLLKTLGLQLPFSLEANLSEMVNSPMGLYISSVFHKTFVEVDEEGTKAGAATGDVIVDRSLPIRMDFVANHPFLFLIREDIAGVVLFIGHVANPAVSS", - "output": "extracellular space ; serine-type endopeptidase inhibitor activity ; negative regulation of peptidase activity" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MSQPLETFDVIVIGAGWYGLMAARTFLELAPDTNLLILDDGKTVGGVWSKERIYPSLFAQISHPLFEYSFYPMPEEDISPDGFVSGKTIQKYLEAFAKDHGLILHLRLETRVEKVKRGVNSNEWILEIKGDKPLACSKLIYATGANSSPIIPKWPREGFEKPVIHSLDLGRYQDYIANNVQKAVVVGRSKSSYDAVYHLLCAGKKVNWVMRDGQSGPFSLYAPTFMGLWNIADHISTRFASSFSPCIMSTDGFCYNFFQRSALGRVLTNMYWRTANYLSVSHAEYWRTENSEKLRPRPYSDGVFWGSGGIGIATAPDFWETFHRGDVTIHSTEIESVSHKDVTNLKNGYSIATDIIIHCTGFDKGYGAFDPQLRNELGLEYNTKEFSRWTMLDEKADQTVDRLLPYICDSPNQYGDSEASRSTGQGPNRHYRRLVVPELAARGDRSILFPGHIHSAFTPLAAELQALWGVSWMLGWRDLPSKEEMETEAANFNAWTRKRYLEQGRKHSYFIYDYIPYIDTLMKDLGLDPFRKSNVFEEWFVRYKPSDYKTILEEYRSVRRHEREMERSGEESVARMKRCD", - "output": "monooxygenase activity" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MATIQEIECDFLAKIAQKFTNAEIELINKAFYHAKTWHENQKRLSGEPFFIHPLRTALSLVEWNMDPITICAGLLHDIIEDTDQTEANIAMIFSKEIAELVTKVTKITNESKKQRHLKNKKENLNLKSFVNIAINSQQEINVMVLKLADRLDNIASIEFLPIEKQKVIAKETLELYAKIAGRIGMYPVKTKLADLSFKVLDLKNYDNTLSKINKQKVFYDNEWDNFKQQLKKILAQNQIEYQLESRIKGIYSTYKKLTVHEQNISKIHDLFAIRLITKSELDCYHILGLIHLNFLIDSKYFKDYIASPKQNLYQSIHTTVRLKGLNVEIQIRTQQMDNVSKFGLASHWIYKEQKEGLLAPALQLNYLVTKQKHSHDFLKRIFGTDIIKINVSASHEPNVIKQINVDSNNKLLDIAFENYPKQFAKLTKIEIDGVEINSFDTSVENEMLIEFYFGKNNNLKSKWIRYMNNPIYREKVKKSLAKLAKSGRYSELAFYEKELGEKQLKLASETEIQKRLNTLRIKKMSDYLALIECTNFTNDEHLLFLAKNNDKWNKLTKPLKFAFSKVVFHNSYFEQIEGIFITKIVIEPCCSKIPDMPEQVTGILTKNILSVHRYGCKNLQNKKQLKIIPLYWNIQQLKLKPRKFRSYININGVWSEKTINKICQTIINGDGYIEKIIPKINKQKDEFDLNITLFVNNYQQLLTLMDQITTKNISFSWKYL", - "output": "guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity ; guanosine tetraphosphate biosynthetic process" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MNNRMLSFPSMLFLLAFGIVLSVSAGTTHADELANQTAKVADEASIVVSTSQAAVEQTQSQEKEISPAMEEDTSNLSLKPNAQQESQSPDSSTELQDPAEQTPPETSDASAPATTSADSVEKYAQDATQNQSSTSNGPGVIRATSAQVTATRSVVSSQSGDAIVDLSADKASYRQGEDVNLSVDFKNTTDKEQDVTVYADVYYIDNKLGTYKFSKHLKAGEGYKMQSGDLKIPASQFENNHGYLLKVRVRDADNNTLSEVNKAIAVESDWTKFPRYGIVGGSQDTNNSLLSKDADRYRAEIEKMKNMNINSYFFYDVYKTATNPFPSDEATFKQDWNTWSGSEIDTQAVKDIVNQVHDGGAVAMLYNMILAENTNTGEAPVLPETEYAYNSDDRGYGAQGQPMSYTVKIPKDGQEEDVEIQRYYNPTSKLWQDYIADKMGQAMKNGGFDGWQGDTIGDNEVYSYADKDSNDPSKKFWLTEGYAEFLRAIKEKLPNYYLTVNDVNGEQIYRLKDGNQDVIYNEIWPFGPALPSEMAAVKPNTVTSRPVLTKVRQGDWKISIVGAYMEGSENGGSKADAEAGKSLQTDAVLLTSASIAAAGGYHMSLAALANQQDETDGGQGIGVLQTAYYPTQSLKTSSELTRKNNDYQQFITAYENVLRDGVENDDAQVNTFDSNGQKLSTDAKGITGNQVWTYGKKGDNFRTVQLLNLMGINSDWKNEDGSAANKTPDEQTNLTVKYALGDVSMEDAQRMANQTYVTSPDDWSKSNLQKVSASVKTDENGKPVLVINVPKLTLWDVVYISNANQESAPEADQAQTPAAQSSDDKVAENETSQPAAEDAKEQTSEPAQDQAAPAEQGQAINQAESPATEPEAEVTPATAEPAKVDAPEANQAADQAVSPEPASQEQAASQSQPEANQTPASNETPATQGNSEQPELNEPTAQTQPSSQVSPANTSVTPVAEQPTNQGQAADKADQAPTNSTSTPESTSPVEPAATDQSSDTPIVTAGNLSVQPAETETPTVPDKQGDSKANQSSTETPVADQVPAVAEQPQATEPNQAKPSVDKAAAPEALSLIQLKQQTPAIQAKEADDPEVDETKSEVTPDSGTDKAPEAGQVDSDKAPTVKPSTPENNDNQPNNANDADKNKTNEADSNKANQDSTKGSSADQSGKSTTPEDGPDNSSPEDPETKPSDPNTDTSDQEQVKPSLPVVPNQTVDDPKTDDTDTPANTDSAKSKKVADADKNKVATDSEGRQKSSEFPKEATDLEKVGQPASPQVAGVKSSVATSPEKKSEPVSKTSTTSSSDKLPKTGDHKTVVLIIVLGLVFVGMTGLLARHEKK", - "output": "extracellular region ; dextranase activity ; metabolic process" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MPAALVENSQVICEVWASNLEEEMRKIREIVLSYSYIAMDTEFPGVVVRPIGEFRSSIDYQYQLLRCNVDLLKIIQLGLTFTNEKGEYPSGINTWQFNFKFNLTEDMYSQDSIDLLANSGLQFQKHEEEGIDTLHFAELLMTSGVVLCDNVKWLSFHSGYDFGYMVKLLTDSRLPEEEHEFFHILNLFFPSIYDVKYLMKSCKNLKGGLQEVADQLDLQRIGRQHQAGSDSLLTGMAFFRMKELFFEDSIDDAKYCGRLYGLGTGVAQKQNEDVDCAQEKMSILAMINNMQQ", - "output": "CCR4-NOT complex ; CCR4-NOT core complex ; nucleus ; P-body ; 3'-5'-RNA exonuclease activity ; metal ion binding ; poly(A)-specific ribonuclease activity ; RNA binding ; exonucleolytic catabolism of deadenylated mRNA ; positive regulation of cell population proliferation ; positive regulation of mRNA catabolic process ; RNA-mediated gene silencing" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MRWRLSKPQAATSIEQSKGSFEDAIRRNLLFAQLQDLVAWGRKNSLWPYNFGLSCCYVEMVTSFTSKYDIARFGAEVIRATPREADLMVISGTVFIKMAPVIKRLYEQMMEPRWVISMGSCANSGGMYDIYSVVQGVDKFLPVDVYVPGCPPRPDAFLEGLLLLQEAIGKEQRPLSWAIGPQGVERAPKPSLRDQRRAERQKATVFRSPDEV", - "output": "plasma membrane ; 4 iron, 4 sulfur cluster binding ; iron ion binding ; NADH dehydrogenase (ubiquinone) activity ; quinone binding" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MNLRDNLRRLLVRFYARRVEGHLDHDQVPKHIGVIMDGNRRWAKAAGSTTAQGHRAGADKIEEFLGWCSETDVGVVTLWLLSTDNFDRPQEELGPLLGIIEGVVRTLAADGRWRVHHVGTPDILPSQMQNALKEAEETTAHVDGILVNVAIGYGGRQEIADAVRSMLLDAHEKGTSIPDLADAVDVDLIGKHLYTGAQPDPDLVIRTSGEQRLSGFMLWQTAHSEYYFCEVFWPAFRKVDFLRALRDYAARHRRYGN", - "output": "magnesium ion binding ; prenyltransferase activity" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MSSQEKLLKTVIRPHVSDKTYGLSDANSTIVFEVARFANKQDVKNAVEKLFEVKVESVNILNVKGKARRFGRVEGRTKAWKKAYVKLAEGHDINFVGAE", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MMDAEKVSTDGEAISEGEVGSNGETPPETEVEFIGETAPDTDVEFIGETSPGTDVEPTGESIQETEVESIGEATPGMDVEPIKKTMTELNVESIGEETSETDVDSIRKALRGIDLESITVAYPPKKAKHRKVRPQAEVESTGRAAPEGELEVSDHEKVEALLDELDELSEIVSSPEVSYSDISPLEMGEDDTNVSATSTDTFQQGIYEPIEPIEPTEPPEPAEPPKPAETPEDSTVRAPAHPYQRDFPMGARHRFRLSIMGSLTPSDTDDLPLETDEPPQQESVQSTPRALEETRIQFLDQVQSLSPEALLDRATEGSDEAEEEGSQLIVLDPDHPLMIRFQEALKGYLNRQMDKLKLDVQELDVATKQTRSQRQELGVNLYGVQQHLARLQMQLEKSHDRHSLVACERRRKEEELQCARSVYNKTCQTANEERKKLAALQTEVESLALHLFYMQNIEQDVRDDIQVMKQVVRKTETEKMHAEVEKKKQDLFVDQLTERSHQLEENIALFEAQYLSQAEDTRVLKKAVTEAITEIDTIAVEKKRILQQWTTSLVGMKHRNEAYKTVMDALRECQHQVKSTDSEIEVCKKSIMQEEEKNEKLARLLNRAETEATLVQKMTAQCLSKQEALQTEFNTYQLALQDTEEMLNKGYVEHSAVLSELQATRQAFHQEQELRQKMDMSMVDKLQEQGTSSKMTKYFHQLLRKLQKENTNLVTHLSKIDGDIAQATLDITNTNCKIDMHKKTLAEMDKEVKRFNDLITNSESEIARRTILIERKQSLINFFNKQLEQMVSELGGEEAGPLELEIKRLSKLTEEYNTGVAEAQMTWLRLQQELVQVTHEREEQLVSVDQLKKEVHIMEQKKLRIESKIAHEKKEQKIVSRHMRDLDNDLSKLNMLLDKNRCSSEELEQNNIATETEFLRTLKDSERETIQMQEKLMELSEEKATLLNSFMEAEHQIMLWEKKIQLAKEMRSSVDSETGQTEIRAMKAEIHRMKVRHGQLLKQQEKMIRDMELAVARRETIVVQAEGQSKIDKKVITKTEFHYQQRELQKKVREMHKATDDCTNTISELEETQKFLSSSLQEKQQLLSEMQATTDVLEEEINQLTALKRQNLLEIVTLQTRGKHLQAAIEGKYVFLHRNSRSQLMERKRLSVRLSQLNKVLSSVQEDYPQYQEVLQSIQQKIATKLETPEPS", - "output": "axoneme ; cilium ; cytoplasm ; extracellular region ; motile cilium ; axonemal dynein complex assembly ; axoneme assembly ; cilium movement ; determination of digestive tract left/right asymmetry ; determination of left/right symmetry ; determination of liver left/right asymmetry ; determination of pancreatic left/right asymmetry ; epithelial cilium movement involved in determination of left/right asymmetry ; epithelial cilium movement involved in extracellular fluid movement ; flagellated sperm motility ; heart looping ; inner dynein arm assembly ; lung development ; motile cilium assembly ; protein localization to cilium ; regulation of cilium beat frequency" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MKANIHPDYHTIKVVMTDGTEYMTRSTWGKEGDTMNLDIDPTTHPAWTGGSQTLLDRGGRVTKFKNRFGNLGI", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MDESVDRVLAGKYPAKAHAKRVAARIRELGYGESGVIYLEGQKTQMIEDNDGSMPFRQRRNFFYLSGCPLPDSYLTYNIEEDHLTLFIPPIDEDSVIWSGLPLSPDEALEMYDVDAVLLTTDVNTSLAHFCSVKKGKKVFAIADQVSPHITFLPFQETDFDVLKRAAEESRVVKDTYEIALLRRANEISTKAHVAVIKAARSAANERELEAIFIATCMSYGCREQSYHPIFASGTNAATLHYQNNNEDLVDKTTGEKRLNMLVDAGGEYRTYCADITRVVPLSGKFSAESRQIYDIVLDMQMTSLAMIRAGVMWEDVHSNSHRVAIRGLLKLGILRGTEEELFDKGISVAFFPHGVGHYLGMDTHDTGGNPNYKDENPKFKYLRLRGTLACGAVVTVEPGIYFCRFIIDPYLASPELGKYIDTNVLERYWNVGGVRIEDNVVVTQNGHDNLTAAPKIPEEIEKLVAAAQ", - "output": "manganese ion binding ; metalloaminopeptidase activity ; proteolysis" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MANPLRKTMVYLGLADEELDYQQGQQPAQQQQSPVQAVPTPAPAPQQQAKRAPVTPLHKPSTTTRNAAPAEMNEILTVHPKAYKDAQVIAENFREGVPVIINLSQMTDDDARRLIDFASGLSIGLYGKIERVTAKVFLLSPSHVAVSGEQSATEAEVEASFFGR", - "output": "cytoplasm ; division septum assembly ; FtsZ-dependent cytokinesis" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MDIIFYHPTFDTQWWIEALRKAIPQARVRAWKSGDNDSADYALVWHPPVEMLAGRDLKAVFALGAGVDSILSKLQAHPEMLKPSVPLFRLEDTGMGEQMQEYAVSQVLHWFRRFDDYRIQQNSSHWQPLPEYHREDFTIGILGAGVLGSKVAQSLQTWRFPLRCWSRTRKSWPGVQSFAGREELSAFLSQCRVLINLLPNTPETVGIINQQLLEKLPDGAYLLNLARGVHVVEDDLLAALDSGKVKGAMLDVFNREPLPPESPLWQHPRVTITPHVAAITRPAEAVEYISRTIAQLEKGERVCGQVDRARGY", - "output": "cytoplasm ; plasma membrane ; glycerate dehydrogenase activity ; glyoxylate reductase (NADP+) activity ; hydroxypyruvate reductase activity ; NAD binding" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MKQFLDFLPLVVFFAFYKLYDIYAATTALIVATAVVLIYSWVRYRKVEKMALITFVLVAVFGGLTIFFHNDEFIKWKVTVIYALFAGALLFSQWVMKKPLIQRMLGKELSLPQQVWSRLNLAWAVFFILCGLANIYIAFWLPQNIWVNFKVFGLTALTLVFTLLSGIYIYRHMPQDDHH", - "output": "plasma membrane" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MSSAPHIPVLGREAIDHLAPREGGIYVDATFGAGGYSRAILDVPGTRLIAIDRDRTAIAGGAELVERSAGRLTLVEDRFSHLADVCAAQGVDAVDGVVMDVGVSSMQLDQAGRGFSFRLDGPLDMRMGQAGPTAADVVARASEADLADIIYLLGEERHSRRVARAIVADRQETPFTTTRALADLVGRVVRSKPGDIHPATRTFQALRIFVNEELEELQTALTAAERVLKPGGRLVVVSFHSLEDRIVKNFLAERSKTGGGSRHLPEVAQTAPSFQLLTRRPVVAGEDEVAHNPRARSAKLRAAERTSAPAHKDDQSSSWPRLSDVMRGG", - "output": "cytoplasm ; rRNA (cytosine-N4-)-methyltransferase activity ; rRNA base methylation" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MNPVRQPYDLAAPAPNGMRRGRTTGSCATAAVKAALMLLLDGVDADEVFISLPDPDFYLAVPVESVAWLDENTVRAEVLKYAGDDPDNTDGATIFAEVKLNSSGALRFLAAPGVGMVTQPGLRIPPGEPAINPVPRQMMRMAVDEVLAGRPDPGIDLAIGCVDGDKIAKRTFNPMLGIVGGISILGTSGIVEPMSQAAWIASIEVYVRVALGELPPAIAFTPGKIGRGYAADTLGLEKKQVVQIANFVGDSLDFAESVLIEQGRILDTLWVLGHPGKIAKLLDGVWDTHSGKSGMAMDAVAGVAADLGYPSELVAQIKQANTVENVVQIMNSQPDTRGYWMEIERRTAARMATKVPSVRQVAVRLFSMDGTPLGEAA", - "output": "cobalt-precorrin-5B C1-methyltransferase activity ; cobalamin biosynthetic process ; corrin biosynthetic process ; methylation" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MFRPQVVGVTGRTDLGRAVRVAERVCRLCDREGFEVLVDDSLGIGEYPRVNLKDMGKEVDMIITIGGDGTILRVSRITSEYEVPILGVNLGKFGFLTEVSESGLKEAVSRLARGDFNLEEHRKLRIKIGGSDEGDALNEVTVITSRPAKMIRYRLSIDGFELETTWADGVLVATPTGSTAYSLSAGGPIVEPQVECSIITPLNPFKLEARPMVVSMDRRVEIDVDDPERAEVVVDGQEYMNLDGTVSVTRSPNVARFIRFGSTYFERLKEKFLRWD", - "output": "cytoplasm ; ATP binding ; metal ion binding ; NAD+ kinase activity ; NAD metabolic process ; NADP biosynthetic process ; phosphorylation" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MAISAKLVKELRERTGAGMMDCKKALTETDGDIDKAIDYLREKGIAKAAKKADRIAAEGLVHVEVKGNEAAIVEINSETDFVARNEGFQELVKEIANQVLDSKAETVDALLETKLSSGKTVDERMKEAISTIGEKLSIRRFEIRTKSDNDAFGAYLHMGGRIGVLTVVEGSTDEEAAKDVAMHIAAINPKYVSSEQVKEEEINHEREVLKQQALNEGKPENIVEKMVEGRLRKYLQEICAVDQNFVKDPDQTVEAFLKSKGGKLVDFVRYEVGEGMEKREENFADEVKGQMK", - "output": "cytoplasm ; translation elongation factor activity" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MARIAGVNIPNHQHTEIGLTAIFGVGRTRSRSICVAAGVDFSKKVKDLTDADLEKLREEVGKFVVEGDLRREVTMNIKRLMDLGCYRGVRHRKGLPMRGQRTRTNARTRKGPRRAAQALKK", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; tRNA binding ; translation" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MNSQDLKKRQEKIRNFSIIAHIDHGKSTLADRILEKTETVSSREMQAQLLDSMDLERERGITIKLNAIELNYTAKDGETYIFHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNDLEILPVINKIDLPAADPERVRHEVEDVIGLDASEAVLASAKAGIGIEEILEQIVEKVPAPTGDVDAPLQALIFDSVYDAYRGVILQVRIVNGIVKSGDKIQMMSNGKTFDVTEVGIFTPKAVGRDFLATGDVGYVAASIKTVADTRVGDTVTLANNPAKEALHGYKQMNPMVFAGIYPIESNKYNDLREALEKLQLNDASLQFEPETSQALGFGFRCGFLGLLHMDVIQERLEREFNIDLIMTAPSVVYHVHTTDEDMIEVSNPSEFPDPTRVAFIEEPYVKAQIMVPQEFVGAVMELSQRKRGDFVTMDYIDDNRVNVIYQIPLAEIVFDFFDKLKSSTRGYASFDYDMSEYRRSQLVKMDILLNGDKVDALSFIVHKEFAYERGKIIVEKLKKIIPRQQFEVPIQAAIGQKIVARSDIKALRKNVLAKCYGGDVSRKRKLLEKQKAGKKRMKAIGSVEVPQEAFLSVLSMDDDAKK", - "output": "plasma membrane ; GTP binding ; GTPase activity ; ribosome binding ; translation elongation factor activity ; positive regulation of translation" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MRLYFSAFRHPKRLGLCLLITLSIILLGWQCVLLYNHSPEIQRSVYTLTGLAPSSKMAFVTMLTVRAANGENEVENTQQDWYYNSTRLLVHRLVKFKPTKSKYPVVVLAMKGIDQWKLDQLQEDGAIVKVVDPLYAHEVVDDVNDIALLDSRWSMMFTKLRVFEMYEYDRICFLDSDILPIKKMDKVFDVHQLSYSKDSVLFPPTLFYKPRRSIFWRRFTEEFAAYGLTRDDLYPYVFAAVSDPGMWHETPPPFKDYFNAGLFVFKPLKAHYKRLMALARFPKLYDNANMMEQSLLNFAYNSAGAFPWESLDWTFNGLWARKNDLPYLKAVHGKHWQPEGSLGYDEDTSKLWWDAFQEMQTYHDQQRNADLY", - "output": "cytoplasm ; endoplasmic reticulum ; Golgi apparatus ; alpha-1,3-galactosyltransferase activity ; glycosyltransferase activity ; meiotic cell cycle ; protein N-linked glycosylation ; protein O-linked glycosylation" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MFLVIGAILASALFVGLLLYHLKFKRLIDLISYMPGPPVLPLVGHGHHFIGKPPHEMVKKIFEFMETYSKDQVLKVWLGPELNVLMGNPKDVEVVLGTLRFNDKAGEYKALEPWLKEGLLVSRGRKWHKRRKIITPAFHFKILDQFVEVFEKGSRDLLRNMEQDRLKHGESGFSLYDWINLCTMDTICETAMGVSINAQSNADSEYVQAVKTISMVLHKRMFNILYRFDLTYMLTPLARAEKKALNVLHQFTEKIIVQRREELIREGSSQESSNDDADVGAKRKMAFLDILLQSTVDERPLSNLDIREEVDTFMFEGHDTTSSALMFFFYNIATHPEAQKKCFEEIRSVVGNDKSTPVSYELLNQLHYVDLCVKETLRMYPSVPLLGRKVLEDCEINGKLIPAGTNIGISPLYLGRREELFSEPNSFKPERFDVVTTAEKLNPYAYIPFSAGPRNCIGQKFAMLEIKAIVANVLRHYEVDFVGDSSEPPVLIAELILRTKEPLMFKVRERVY", - "output": "endoplasmic reticulum membrane ; heme binding ; iron ion binding ; monooxygenase activity ; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MSKLIAFDQEAREGLQKGVDALADAVKVTLGPRGRNVVLDKAFGGPTVTNDGVTIARDIDLEDPFENLGAQLVKSVAIKTNDIAGDGTTTATLLAQALVNEGLRTVAAGANPIAVNRGIAKGTERVVELLRELAQPVADNAAIANVATVSSRDEKIGAMVADAFDKVGKDGVVTVEESQSIEDESIVTEGVSFDKGYLSPYFVTDQETGHAELENPLILLVREKISSLPDFLPVLEKVANSGKPLLIVAEDIEGEPLQMLVLNAIRKSLKVAAVKSPYFGDRRSAFMDDLAIVTGGTVIDSELGHKLSETTLEQLGSARRVNITKEETVLVDGAGSAEAVEERRNQIRNDIERTDSSWDKEKFEERLAKLSGGVAVIRAGGATETEVNERKLRIEDAINAARAAGQEGVIAGGGSVLVQIADEIEELSRKEEGDEGIGLRSLARALRRPAYWIADNAGLDGAVVVSKIAEQPNGSGFNAATLEYGNLLEQGIIDPVKVTHSAVVNATSVARMVLTTETAVVDKPAAPAGQAGAHAGHAHAH", - "output": "cytoplasm ; ATP binding ; ATP-dependent protein folding chaperone ; isomerase activity ; unfolded protein binding ; protein refolding" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MKDLTAKQRSVLIFIEEFIEKNGYPPSVREIARRFRITPRGAQLHLVALEKKGYIERKNGKPRAMRVTKSVKNRVPLIGEIRAGEKKEAIEYLEDYIEVPGSFLSSGYEHFLLRVKGESMIEEHICDGDLVLIRRQDWAQNGDIVAAMVEGEVTLKKFFQRGEMVELRPANKEMSPMFFRADRVKILGKVVGVFRKI", - "output": "DNA binding ; serine-type endopeptidase activity ; DNA repair ; DNA replication ; negative regulation of DNA-templated transcription ; proteolysis ; SOS response" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MAYPFQLGLQDATSPIMEELMNFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAVILILIALPSLRILYMMDEINNPVLTVKTMGHQWYWSYEYTDYEDLCFDSYMIPTNDLKPGELRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATVTSNRPGLFYGQCSEICGSNHSFMPIVLEMVPLKNFENWSTSMI", - "output": "mitochondrial inner membrane ; respiratory chain complex IV ; copper ion binding ; cytochrome-c oxidase activity" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MANDAEDAVRSYLTSVKEDLMTGVSFMIPFVTIGGIFLALGYAVASLSNNVQDVFNSTGTAGWFLAQIGVAGLTLMVPVLGAYIAYAIADRPGLAPGFILSYIIQQGNVLQAAGDVIGLQGGSAGAGYLGAIVAGFLAGIVARWFKQRDVPEFIAPMMPVLLIPVATTAVLTPVMLFVLGVPISIANAGLTEFLSNMQGGGQAILLGGILGAMMAADMGGPINKVAYVFSVGLISEGVTAPMAAVMIAGMVPPIGLALSNFIAPQKYAAEMYENAKSGVLLGFSFITEGAIPYAAADPARVIPSVVAGSAVAGAASMALGVNMPAPHGGIFVVPLSNQPFMFIACILLGSIVTAVIATAIKPNFDAKMAAQSSDD", - "output": "plasma membrane ; carbohydrate:proton symporter activity ; protein-N(PI)-phosphohistidine-sugar phosphotransferase activity ; phosphoenolpyruvate-dependent sugar phosphotransferase system" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MPATMVLTAPSLLSSSALIVLAYLIGSIPFAVVVSKLMGLQDPRSYGSGNPGATNVLRTGNKTAAALTLLGDAAKGWFALWLARALVPELSWGAYALVALAVFLGHLYPLFLRFKGGKGVATALGVLMAIEPWLAVATIATWLIVAVFSRYSSLAALVAAFFAPVYYVFGSGAAWHARLEVGLAIAVISALLFYRHRANIARLLKGTESRIGKKK", - "output": "plasma membrane ; acyl-phosphate glycerol-3-phosphate acyltransferase activity ; phospholipid biosynthetic process" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MATNAKPVYKRILLKLSGEALQGTEGFGIDASILDRMAQEIKELVELGIQVGVVIGGGNLFRGAGLAKAGMNRVVGDHMGMLATVMNGLAMRDALHRAYVNARLMSAIPLNGVCDSYSWAEAISLLRNNRVVILSAGTGNPFFTTDSAACLRGIEIEADVVLKATKVDGVFTADPAKDPTATMYEQLTYSEVLEKELKVMDLAAFTLARDHKLPIRVFNMNKPGALRRVVMGEKEGTLITE", - "output": "cytoplasm ; ATP binding ; UMP kinase activity ; 'de novo' CTP biosynthetic process ; phosphorylation" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MAASLVRSCCSRASRAITTVRFMSNVPEDTVYGGPKPQNSNQRVTLTQLRQKHRKGEPITMVTAYDYPSAVHIDTAGIDVCLVGDSAAMVVHGYDTTLPISLEEMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRVLKEGGMDAIKLEGGSPSRITAAKSIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNIASAVKVVETAMALQEAGCFSVVLECVPPPVAAAATSALNIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKFCKQYAQVGEVINKALLEYKEEVSKHLFPGPSHSPYKISSSDLDGFLSELQKLGLDKAASDAAASAEKMDHSDSPSSQ", - "output": "mitochondrion ; 3-methyl-2-oxobutanoate hydroxymethyltransferase activity ; cobalt ion binding ; magnesium ion binding ; zinc ion binding ; pantothenate biosynthetic process" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MSRVGKKIIDIPSDVTVSVEGNTITVKGPKGELSRTMNERMTYKQDESTLEVVRPTDSKDDRTVHGTTRALINNMIQGVKEGYQKTLELVGVGYRAQMQGNDLILNVGYSHPVEIKADDGITFGVEKNTTVTVAGISKEQVGAIASNIRSVRPPEPYKGKGIRYQGEYVRRKEGKTGK", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MYTLLSGLYKYMFQKDEYCILILGLDNAGKTTFLEQSKTRFNKNYKGMSLSKITTTVGLNIGTVDVGKARLMFWDLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLSESKEAFEKVVSSEALDGVPILVLANKQDVETCLSIPDIKTAFSDCTCKIGRRDCLTQACSALTGKGVREGIEWMVKCVVRNVHRPPRQRDIT", - "output": "cytosol ; Golgi apparatus ; membrane ; trans-Golgi network ; GTP binding ; GTPase activity ; gastrulation ; Golgi to plasma membrane protein transport ; intracellular protein transport ; protein localization to Golgi apparatus ; retrograde transport, endosome to Golgi" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MTSQAIQLIDVNKEYNKESLEYFKQCVGTRDVGFNYHVISVFGSQSSGKSTLLNILFNTQFDTMDAQVKRQQTTKGIWLAHTQNVNNHKSTTDTDSDYFILDVEGSDGAERGEDQDFERKAALFAISVSEVLIVNMWEQQIGLYQGNNMGLLKTVFEVNLSLFGKRGNDHKVLLLFVIRDHVGVTPLKSLQESLITELEQIWSELNKPTGCEETTLYDFFDLEFKGLGHKLLQEEQFYDDVKSLGDSFIDSESNEYLLKPNYHHKLPIDGWNMYAEQCWEQIENNRDLDLPTQQILVARFKTEDIANEAYAKFTEEYETETEKRINDKTELVSYLKKIKDECLGEYDEHASRYAKAVYEEKRIELVDKVNERLFTTASKYLDMLTAVLLTKLENGMKEKENIKLPFEDRYLKLFKDIEAEFDAAITEFFSKDLLTKIKDFELKFAADVHEKKLQLRESELNALLSKIKKQLTLRIKDEEIELLSKPTPDLWDKVTDTFENIMKKTLSRFATGEGEYEFKMGLSEDENKKQYHAIRAFAWTLLETVVHDYLKEDTIVSLLRDRFESKFRYDSNDVPRLWKNEDEIDQSFRVAKEHALEILDILTLAVKTDGTEVIPDAFEDEPNEGLIYDDSHDVYHSNRFAHILNETQKEKVQQQFRRQINVTVLDCKRSIVTSSTHIPIWIYAVIVVLGWNEFMIVIRNPLFVTLALLSIVSFYFIQKFGLWGPVMNVVNTALGESRTTIKEKLRQFVLEEHELKKTAKVEEEIELQDLSKNSSSSGNEDSD", - "output": "cortical endoplasmic reticulum ; endoplasmic reticulum membrane ; GTP binding ; GTPase activity ; endoplasmic reticulum inheritance ; endoplasmic reticulum membrane fusion" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MRLVLLNYGIWHDRRSALKFTDIDYFVFSDASKYVSIGMSPYMRDTYRYTPMLAILLLPTQYGFPSWGKYLFSISDLIAGWLMIKLLSRRISYKRSLIYSSFWILNPFVAIISTRGNCEAILGILSIALLYLIEKKSVWLASLILGFSVHFKIYPFMYGIAFLVYFSKPKKGSTFMEKFLSLLSINQLKIVVGSLFMFTICNLLMYYLYGSPFLEHTYLYHFGRTDHRHNFSLHHLNLYYESSFGAKASSLFAFLPQLSLCMLIPLVFGKKNLPGTLFAQTFAFVTFNKVCTSQYFMWYLVFLPLVLPNSKLLSKKGLICLSLWIIGQLLWLISAYNLEMLGKSVFIPLWLSGLLFFFFNVYELKIILDSL", - "output": "endoplasmic reticulum ; endoplasmic reticulum membrane ; glycosylphosphatidylinositol-mannosyltransferase I complex ; alpha-1,4-mannosyltransferase activity ; glycolipid mannosyltransferase activity ; mannosyltransferase activity ; cell wall organization ; GPI anchor biosynthetic process" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MKYLIRARLEVDGRVEKHDVIGAIFGQTESLLGSDFSLEELQNKDKLGRIHVELKYQGTKTIGSISVPSNLSRVETAIIAAMLETIDKIGPYPAKITIEEIRDLRLERLEKIKQRARELLRLMKEKEPDIREIIREVLQEEQAKAQVAKLVEYGPERLPAGPGVEKADTIIVVEGRSDVNTLLRYGYTNVIALGGAREKVPETIKRLAEQKKVILFVDGDRGGELILKNVLPQMKVDYVARAPEGREVESLTGREIAQALSQMKPAEIVARELGIEAAEKPAEEAVKREEEAAAEAKPPAPAVQEKAAKPPEEKPPTVKFTIPKAVLEAAKELRGTLEAIVYDKEWRELDRLKVRELYDYISKSEPGRIYAVVFDGIITQRLLDIASEKGVGIIIGNRIGNKITHKPTNVKFLTFSDLF", - "output": "DNA-directed RNA polymerase complex ; exosome (RNase complex) ; primosome complex ; DNA primase activity ; metal ion binding ; poly(A) binding" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MISIMDRSEIVARENPVITQRVTNLLQTNAPLLFMPIDIHEVRYGAYTLFMYGSLENGYKAEVRIENIPVFFDVQIEFNDTNQLFLKSLLTAENIAYERLETLTQRPVMGYREKEKEFAPYIRIFFKSLYEQRKAITYLNNMGYNTAADDTTCYYRMVSRELKLPLTSWIQLQHYSYEPRGLVHRFSVTPEDLVSYQDDGPTDHSIVMAYDIETYSPVKGTVPDPNQANDVVFMICMRIFWIHSTEPLASTCITMAPCKKSSEWTTILCSSEKNLLLSFAEQFSRWAPDICTGFNDSRYDWPFIVEKSMQHGILEEIFNKMSLFWHQKLDTILKCYYVKEKRVKISAEKSIISSFLHTPGCLPIDVRNMCMQLYPKAEKTSLKAFLENCGLDSKVDLPYHLMWKYYETRDSEKMADVAYYCIIDAQRCQDLLVRHNVIPDRREVGILSYTSLYDCIYYAGGHKVCNMLIAYAIHDEYGRIACSTIARGKREHGKYPGAFVIDPVKGLEQDKPTTGLDFASLYPSLIMAYNFSPEKFVASRDEAKSLMAKGESLHYVSFHFNNRLVEGWFVRHNNVPDKMGLYPKVLIDLLNKRTALKQELKKLGEKKECIHESHPGFKELQFRHAMVDAKQKALKIFMNTFYGEAGNNLSPFFLLPLAGGVTSSGQYNLKLVYNFVINKGYGIKYGDTDSLYITCPDSLYTEVTDAYLNSQKTIKHYEQLCHEKVLLSMKAMSTLCAEVNEYLRQDNGTSYLRMAYEEVLFPVCFTGKKKYYGIAHVNTPNFNTKELFIRGIDIIKQGQTKLTKTIGTRIMEESMKLRRPEDHRPPLIEIVKTVLKDAVVNMKQWNFEDFIQTDAWRPDKDNKAVQIFMSRMHARREQLKKHGAAASQFAEPEPGERFSYVIVEKQVQFDIQGHRTDSSRKGDKMEYVSEAKAKNLPIDILFYINNYVLGLCARFINENEEFQPPDNVSNKDEYAQRRAKSYLQKFVQSIHPKDKSVIKQGIVHRQCYKYVHQEIKKKIGIFADLYKEFFNNTTNPIESFIQSARFMIQYSDGEQKVNHSMKKMVEQRATLASKPAGKPAGNPAGNPAGNALMRAIFTQLITEEKKIVQALYNKGDAIHDLLTYIINNINYKIATFQTKQMLTFEFSSTHVELLLKLNKTWLILAGIHVAKKHLQALLDSYNNEPPSRTFIQQAIEEECGSIKPSCYDFIS", - "output": "DNA binding ; DNA-directed DNA polymerase activity ; nucleotide binding ; DNA replication ; viral DNA genome replication" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MTSFNDGRTVHVVIPARYGSTRLPGKPLVDLEGEPMIVRVHARVRRALPEADIVVAIDDARIAEVLDARGIRFAMTDTGHASGTDRAAEVARVSGWPDTDAVLNVQGDEPLVPTALLQAFAGFCGATAALGVATVACPIGEVALLDEPAIVKVVVDHRGRALYFSRAAIPFCRDGRPADSAGSNGLFLRHIGLYGYTNATLQALSRAAPCELEQLEKLEQLRALWLGMPIDVMRWPDAPPAGIDTPDDVARVVSLLKRQTHDATEPY", - "output": "cytoplasm ; 3-deoxy-manno-octulosonate cytidylyltransferase activity ; CMP-keto-3-deoxy-D-manno-octulosonic acid biosynthetic process ; lipopolysaccharide biosynthetic process" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MAVLLMRLMLQTTKLDHNLIGRCLQRHAVKPDPAQLSLSASTPKLLYLTSAKGFSTAGDPQGERKQKRRDAFSNTGRKISERIIRVLDEKGMDLGMMHRADVIRLMNKQDLRLVQRNTSSEPPEYQLMTGEQIHQERLKLREQEKAKPKTGPTMTKELVFSSNIGQHDLDTKSKQIQQWIEKKYHVQVTIKRRKDAEQSEEETEEIFNQILQTMPDIATFSSRPKAIRGGTASMCVFRHLSKKEEKAYRESQESQRRDTLSKDDDGNSKESDVVCQ", - "output": "mitochondrion ; ribosomal small subunit binding ; ribosome binding ; translation factor activity, RNA binding ; translation initiation factor activity ; mitochondrial translational initiation ; ribosome disassembly" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MARRPRNSRAWRFVLSGVRRDQDGRSPALHAEEEAWGYDSDGQHSNSDSDTDLLTLPPSIPSAVPVTGESYCDCDSQNDPYCSSLHPFRQIKSCQCGEEDNYFDWVWDDCSKSTATVLSCDDRKVSFHMEYSCGTAAIRGNKMLTEGQHFWEIKMTSPVYGTDMMVGIGTSDVNLDKYRHTFCSLLGKDAESWGLSYTGLLQHKGDKSNFSSRFGQGSIIGVHLDTWHGVLTFYKNRKRIGVAATQLRNKKLFPLVCSTAAKSSMKVIRSCCCRTSLQYLCCARLRQLLPGSVDSLEVLPLPPGLKQVLSNKLGWVLQMGSNRSSQHKGDGSATTSCGSYSDSSCTPGHDNCQRKRCRRI", - "output": "protein ubiquitination" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MGHGRRISESIKKQLPVTGPEAPTVKNLMDWYLNNTNTHGCRRIAVSRGYLRRWIWICFTVSSVGMIFWQWTLLLMSYYTVSVSVTVQFQTLPFPAVTICNINPYRKNATSALLEELDKQTKLILKELYTSCTGCSNRKLRSVLLNEAPEEDSGVAKLLQDMPLMKFEVIKEDHVIVSELSSNRQYRINNTFITRMYNNMDLATVGEQVGFKICDANKSNCIIYTFNSGVTAILEWYRLNYLNIMAQIPNEKKLEMGYSADDLIVTCMYDGQSCDSRNFTLFQHPLHGNCYTFNSGDDGNILQTLTGGSEYGLKLTLYLENDDYNPYLFTSMGAKIIVHDQTEYPLVDDVGLEIQTATETLIGLQVTTSAKLSKPYSDCTMDGSDVLEQNLYNTSYSLQICLHSCFQTEMISNCGCAYYEQPLPSGAEYCYYEKYPGWIYCYYQLQDKFVNERLACQDICKETCNSKDWDLTKSLARWPSVASKDWVLNLLNWERGLNNTLNKNDLASIAIFYQDLNLRSLSESPANSIATLLSNMGGQLGLWMSCSIVCFLEMWEVFLVDILTIIARYWLHRGRQWWRKRKERQMQQPSPPDHDTGHHNPVCIDDEDPPTFHTAMQLPCVQTGPVPSTPPPQYNALRIQSVFDEQVSDTEVN", - "output": "apical plasma membrane ; sodium channel complex ; ligand-gated sodium channel activity ; response to stimulus ; sensory perception of taste ; sodium ion transmembrane transport" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MANLKVMDQNGKDSGEVTLNDKVFGIEPNDNVVFEAIIRQRAGKRQGTSKVKNRSAVRGGGKKPWRQKGTGRARQGSIRAPQWRGGGTVFGPTPRSYAYTMPRKQRRLAIKSVLSQKLIDNDLIVLDKLTMSAPKTKELVSMLNSLNADGKVLIVSDDNNVQLSARNLAKVKVVPVNGLNVEDAVNYGKLILTQDAVKKIEEVLA", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MRVNNGLTPQELEAYGISDVHDIVYNPSYDLLYQEELDPSLTGYERGVLTNLGAVAVDTGIFTGRSPKDKYIVRDDTTRDTFWWADKGKGKNDNKPLSPETWQHLKGLVTRQLSGKRLFVVDAFCGANPDTRLSVRFITEVAWQAHFVKNMFIRPSDEELAGFKPDFIVMNGAKCTNPQWKEQGLNSENFVAFNLTERMQLIGGTWYGGEMKKGMFSMMNYLLPLKGIASMHCSANVGEKGDVAVFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDDGVFNFEGGCYAKTIKLSKEAEPEIYNAIRRDALLENVTVREDGTIDFDDGSKTENTRVSYPIYHIDNIVKPVSKAGHATKVIFLTADAFGVLPPVSRLTADQTQYHFLSGFTAKLAGTERGITEPTPTFSACFGAAFLSLHPTQYAEVLVKRMQAAGAQAYLVNTGWNGTGKRISIKDTRAIIDAILNGSLDNAETFTLPMFNLAIPTELPGVDTKILDPRNTYASPEQWQEKAETLAKLFIDNFDKYTDTPAGAALVAAGPKL", - "output": "cytoplasm ; ATP binding ; metal ion binding ; phosphoenolpyruvate carboxykinase (ATP) activity ; gluconeogenesis" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MADPKTKGRGSGGNGSGRRLVIVESPTKARKLASYLGSGYIVESSRGHIRDLPRAASDVPAKYKSQPWARLGVNVDADFEPLYIISPEKRSTVSELRGLLKDVDELYLATDGDREGEAIAWHLLETLKPRIPVKRMVFHEITEPAIRAAAEHPRDLDIDLVDAQETRRILDRLYGYEVSPVLWKKVAPKLSAGRVQSVATRIIVARERDRMAFRSAAYWDILAKLDASVSDPDAAPPTFSARLTAVAGRRVATGRDFDSLGTLRKGDEVIVLDEGSATALAAGLDGTQLTVASAEEKPYARRPYPPFMTSTLQQEASRKLRFSAERTMSIAQRLYENGYITYMRTDSTTLSESAINAARTQARQLYGDEYVAPAPRQYTRKVKNAQEAHEAIRPAGETFATPDAVRRELDGPNIDDFRLYELIWQRTVASQMADARGMTLSLRITGMSGHQEVVFSATGRTLTFPGFLKAYVETVDELVGGEADDAERRLPHLTPGQRLDIVELTPDGHATNPPARYTEASLVKALEELGIGRPSTYSSIIKTIQDRGYVHKKGSALVPSWVAFAVTGLLEQHFGRLVDYDFTAAMEDELDEIAAGNERRTNWLNNFYFGGDHGVPDSVARSGGLKKLVGINLEGIDAREVNSIKLFDDTHGRPIYVRVGKNGPYLERLVAGDTGEPTPQRANLSDSITPDELTLQVAEELFATPQQGRTLGLDPETGHEIVAREGRFGPYVTEILPEPAADAAAAAQGVKKRQKAAGPKPRTGSLLRSMDLQTVTLEDALRLLSLPRVVGVDPASGEEITAQNGRYGPYLKRGNDSRSLVTEDQIFTITLDEALKIYAEPKRRGRQSASAPPLRELGTDPASGKPMVIKDGRFGPYVTDGETNASLRKGDDVASITDERAAELLADRRARGPAKRPARKAARKVPAKKAAKRD", - "output": "cytosol ; peptidoglycan-based cell wall ; plasma membrane ; DNA binding ; DNA topoisomerase type I (single strand cut, ATP-independent) activity ; magnesium ion binding ; DNA topological change ; negative regulation of ribonuclease activity" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MVNFYDDVDESKSHGEFPLIPVVLQNSSELSVRTIPTGNEIIESVHLTKWLRKYRNALASQLDRYEKGWQSKIANFRLQVQHVINYSRKNIFNVDSENKHTVVPGSLIALGAFFAGSIAVNRSNWGAKRLIFGHKSSILEKLCTSLPSRILLPWVLAAATFKYWAPQTSQNLVNATENDLLPADFVKSYHNTWKRIYEEGYVAKKCDLKRQIDQTLQKNIRYAREQLYEKLEQA", - "output": "MICOS complex ; mitochondrial crista junction ; mitochondrial inner membrane ; mitochondrion ; cristae formation ; protein-containing complex organization" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MSRNFYNYDPTVDILQPPLIPDVILKSNLKELTLPTGNQVLESLPLTAWFHRTRSNIISHLTRYEAEWETQKSAARNELHSVKSYLKGNIFNDARELYALPETNILTICAYFAGRIITNRKNWGVSAATLQSVKSSVHRPSLMARVCTSIPSKMVLPWAMAGAVFKELAPTAFDNTITSLESDILDPGFVAQYKTLWRDYYTNGAKKASIEAAELLEGKLQGYIGFARNFIIYSTR", - "output": "fungal-type vacuole membrane ; MICOS complex ; mitochondrial crista junction ; cristae formation ; protein-containing complex organization" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MKTSILFVIFSLALVFALSPATEIEETDRACGQFWWKCGEGKPPCCANFACKIGLYLCIWSP", - "output": "extracellular region ; host cell postsynaptic membrane ; host cell presynaptic membrane ; ion channel inhibitor activity ; potassium channel regulator activity ; sodium channel regulator activity ; toxin activity" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MKFELDTTDGRARRGRLVFDRGVVETPAFMPVGTYGTVKGMTPEEVEATGAQIILGNTFHLWLRPGQEIMKLHGDLHDFMQWKGPILTDSGGFQVFSLGDIRKITEQGVHFRNPINGDPIFLDPEKSMEIQYDLGSDIVMIFDECTPYPADWDYAKRSMEMSLRWAKRSRDRFDSLGNKNALFGIIQGSVYEDLRDISVKGLVEIGFDGYAVGGLAVGEPKADMHRILEHVCPQIPADKPRYLMGVGKPEDLVEGVRRGIDMFDCVMPTRNARNGHLFVTDGVVKIRNAKHKSDTSPLDAECDCYTCRNYSRAYLHHLDRCNEILGARLNTIHNLRYYQRLMAGLRKAIEEGKLESFVTKFYQRQGRPVPPLNVD", - "output": "metal ion binding ; queuine tRNA-ribosyltransferase activity ; queuosine biosynthetic process ; tRNA-guanine transglycosylation" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MSARPGLLARAEARLTREWQRRGALAWALTPFACAFGAIAALRRAAYARGWKARVDCGVPVVVVGNVTVGGTGKTPTVIALVDALRAAGFTPGVVSRGYGAKIVAPTAVTPASAPQQAGDEPLLIARRTLAPVWVCPDRVAAVRALKAAHPEVDVVVSDDGLQHYRLARAVEIVVFDHRLGGNGFLLPAGPLREPLSRRRDATLVNDPYSRALPPWPDTFALSLAPGDAWHLARPSRRKPLAQFAGERVLAAAGIGAPERFFATLRAAGVTPATRALPDHYAFATNPFVDDHFDAILITEKDAVKLGTSWRDARIWVVPVEAALDPRLIALVVEKLRGRTSA", - "output": "ATP binding ; tetraacyldisaccharide 4'-kinase activity ; lipid A biosynthetic process ; phosphorylation" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MTGGALLVAGTTSDAGKSMVVAGLCRLLARKGVRVAPFKAQNMSNNSAVTVDGGEIGRAQAMQARAAGLDPSVRFNPVLLKPGSDRTSQLVVRGRVTGTVSATDYITHRDRLADVVADELASLRAEFDVVLCEGAGSPAEINLRRTDLANMGLARRAHLPVIVVGDIDRGGVLAHLFGTVAVLHPDDQALIAGFVVNKFRGDPTLLAPGLDQLHDLTGRPTYGVIPYSDELWMDTEDSVSVVAGRTIGRPTPPRGADGLRVAAVRLPRISNSTDIEALACEPGVTVRWVTDPADVADADVVVLPGTKATVADLQWLRTAGLAEPIAAHAGAGRPLLGICGGFQMLCRHIDDAVESRAGRVDGLGLLDADIAFAAEKTLRHRTTPLQGYEIHHGQVTRCAADDWAGIGVRRDAVYGTHWHGLFDNDGFRRAWLADAAAAAGRSGFVVADDIDVSARRDAQLDVMADLLQNHLDLDAALGLVDAGPPPRPTISTGIT", - "output": "ABC-type vitamin B12 transporter activity ; catalytic activity ; cobalamin biosynthetic process ; glutamine metabolic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MDANTEHPAVGYGKLGVLLVNLGTPDGTDVTSMRRYLREFLSDRRVIEWSRLFWYPILYGIVLNTRPRKVGKAYELIWNKDLNESWLRTYTRNQAALMAEAFGGQPQVVVDWAMRYGQPSIASRIEALQKAGCERILVFPLYPQYAAATTATVNDKAFEALLKMRWQPALRTVPPYHDDPVYIDALATSINKHLATLDWEPELVLASFHGIPKSYFEKGDPYYCQCQKTARLLREKLGWPQDRLQVTFQSRFGPEEWLQPYTDATVERLAKEGVKRIAVINPGFVSDCLETLEEIAGQAAESFHHNGGEKFAHIPCLNDSPEGMAVLNHVVRRELEGWL", - "output": "cytoplasm ; ferrochelatase activity ; metal ion binding ; heme biosynthetic process" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MPLESGKLINDLRVSELKTELEKRGLSTQGVKVVLTVRLNKALRDEGLDPADHVFEHAVSPMKKSTRRSNEMARAAAAAAAEKVEKGAGDEGNDENVLVEEKEEEEEEEDSHDLQIIEDHELEVPSDEKDDTLVEDEEFEEAEQVEPEPEAVEPVVEEKPEEKLEEKPEEKLEEKPEEKPVEPEVVTVEEPVAEVIEVEKAVAEPVELKEKPEKEPEVVLVEEPVEQLENEPEVVPMEVEEAKKSDEQDGEDEFEEDDSSSDIEIIEPTLQESEPLAEEKVEKKEKKPEEIPHNLEQNEPISMETEEKVEEEVIILNSSINNVSQDDEIVLDYEEDLLEDPLDEPIEQKEPKAAEPTPKQLQKVEASTPQATPSKAASSSAGSGKSMLFGDDVKKTSIWIRGMTPATKASSVKQLASQYGKVIQSKIFNSKAADANGDVKNCFALIQFADVTAMELAMTSLHQKNYQGRVLRVEKVSESHLTSSAEKLAREKHVAEAASTMSTSPAPTPTPEPVVTTTTTTSAAPKRKEPIHAPESSSSEGQRAKRRAIEAPVRSRSRSRGGGGEPRSSRKPITFDREEESNRDSRRTIAAAPPARTSRMARSPLRAPLRAARGSESSRSSTRGGGGGGESLTISSRVDTSGCRGGAIKRSVERSVPNNISTSELRRKHHQIHVTVQQDAPRASYQTEQYARERSSSTTTSSRRRQVSPDRSEQRRHRDEPPPRRAPQEQPSRRRGASPPEPPRRQEGARRSEEPERRRLFDEREQLAHIMAAKDMYAEQQKIRAEKALIAFQMQQLEKKKLEAELQIAQKALLMQQAALGGGGALVVDGGALVAGGGAVGYHHQEHRSSYGGGGSSSNGGSSNRRRQTRRSPSPPQQHHSSSRRQRRDSGGAGRYRQSTSSSNSNRNSNSGGRNLVVTATTTNNTNATNAGRSYGIQSVPDASSYSTNNYQQRSSAASAYDLQITATMPQAGAANSGAAYHQPYGNVYQHNTAAYPVWGGLDAQGHMAMDTNWSQNAATPSTSTSSGGGGGQQWQQQSYGSNQHQHHQNNNSSQPSSSNRRGNDYGNYRGNY", - "output": "nucleus ; RNA binding ; sequence-specific DNA binding ; digestion ; regulation of mRNA processing ; regulation of transcription by RNA polymerase II" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MAPKKPEPKKEAAKPAPAPAPAPAPAPAPAPEAPKEPAFDPKSVKIDFTADQIEEFKEAFSLFDRTPTGEMKITYGQCGDVLRALGQNPTNAEVLRVLGKPKPEEMNVKMLDFETFLPILQHISRNKEQGTYEDFVEGLRVFDKESNGTVMGAELRHVLATLGEKMTEAEVEQLLAGQEDANGCINYEAFVKHIMSG", - "output": "A band ; cytosol ; myosin II complex ; actin filament binding ; actin monomer binding ; calcium ion binding ; myosin II heavy chain binding ; cardiac muscle contraction ; positive regulation of ATP-dependent activity ; regulation of the force of heart contraction" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MTKQVEIFTDGSCLGNPGPGGYGAILRYRGHEKTFNEGYHLTTNNRMELMAAIVALEALKEDCDVVISTDSQYVRQGITQWIHNWKKRGWKTADKKPVKNVDLWKRLDAALSHHTIKWEWVKGHAGHPENERCDELARAAAMNPIQEDVGYQPGS", - "output": "cytoplasm ; magnesium ion binding ; nucleic acid binding ; RNA-DNA hybrid ribonuclease activity ; RNA catabolic process" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MQGFISQVLGPVVDVDFNDYLPQINEAIVVNFESEGKKHKLVLEVAAHLGDNRVRTIAMDMTDGLVRGLKAEALGAPISVPVGEKVLGRIFNVTGDLIDEGEEISFDKKWAIHRDPPAFEDQSTKSEIFETGIKVVDLLAPYAKGGKVGLFGGAGVGKTVIIMELIHNVAFKHSGYSVFAGVGERTREGNDLYNEMKESNVLDKVALCYGQMNEPPGARNRIALTGLTMAEYFRDEMGLDVLMFIDNIFRFSQSGSEMSALLGRIPSAVGYQPTLASEMGKFQERITSTKKGSITSVQAVYVPADDLTDPAPATVFAHLDATTVLNRAIAEKGIYPAVDPLDSTSRMLDPNIIGEEHYKVARGVQSVLQKYKDLQDIIAILGMDELSEEDKLVVERARKIEKFLSQPFFVAEVFTGSPGKYISLEDTIAGFKGILEGKYDHLPENAFYMVGNIDEAIAKADKLKG", - "output": "plasma membrane ; proton-transporting ATP synthase complex, catalytic core F(1) ; ATP binding ; proton-transporting ATP synthase activity, rotational mechanism ; proton-transporting ATPase activity, rotational mechanism" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MSDINNNEPAENIEQPKQEPEDGNNSMSVDEQPETSSTNLPTGDNLAPMSVESPAHLNNEDSPKSDDSRERHGSNYVIEPHLELRDMAKDKTLENFLAQMDDYSPLIPDVLLDYYLSLSGFKCVDPRLKKLLGLTAQKFISDVAQDAYQYSKIRTGSSNASSTTFGAQNFGAGGASGIGSSGRRGDRGKTVLTVDDLSAALNEYGINLKRPDFFR", - "output": "cytosol ; nucleus ; SAGA complex ; transcription factor TFIID complex ; promoter-specific chromatin binding ; RNA polymerase II general transcription initiation factor activity ; histone acetylation ; positive regulation of DNA-templated transcription ; transcription initiation at RNA polymerase II promoter ; transcription initiation-coupled chromatin remodeling" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MGQKINPTGFRLAVTKDWASKWFAKSTDFSTVLKQDIDVRNYLRQKLANASVGRVVIERPAKSARITIHSARPGVVIGKKGEDIEVLKRDLQVLMGVPVHVNIEEIRRPELDAQIIADGIAQQLEKRVQFRRAMKRAMQNAMRSGAKGIKIMTSGRLNGADIARSEWYREGRVPLHTLRANVDYATSEAHTTYGVLGLKVWVYTEGNIKSSKPEHESKQRKAGRRNAAAN", - "output": "ribonucleoprotein complex ; ribosome ; mRNA binding ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MIEKTYQPSDIESRMSRVWEEAGAFKAGRPERREAEPFTIVIPPPNVTGSLHMGHALNNTLQDVLCRFERMRGRDVLWQPGTDHAGIATQMVVERQLMERKEPGRREMGRARFLERVWQWKAESGGVIVNQLKRLGASCDWSRERFTMDEGLSRAVAKVFVELHRAGLIYKDKRLVNWDPKLLTAISDLEVKQVEVKGSLWHLRYPIEGKAFDPSDPSTYIVVATTRPETMLGDTAVAVHPENAKLEYLIGSNVVLPLAGRIIPIVGDDYADPEKGTGAVKITPAHDFNDFEVGRRHHLPQISVLDREGRLTLSENEDFLRGLPSGALMLAEEFDGMDRFAARKAIVARLEEFGFLDKIEPHTHMVPHGDRSNAVVEPYLTDQWYVDAKELARPAMAAVRSGETAFVPKNWEKTYFEWMENIQPWCISRQLWWGHQIPAWYGPDGKVFVAETEDEAIGHALGYYVEQGVITAEQGAGMARDPAKRDGFITRDEDVLDTWFSSALWPFSTLGWPDETPEVRRYYPTNVLVTGFDIIFFWVARMMMMGIHFMKEAPFSTVYIHALVRDEKGAKMSKSKGNVIDPLNLVDKYGADALRFTLAAMAVQGRDIKLSPQRVEGYRNFATKFWNACRFAEMNDCVVPARFDPTAATETLNRWIVHETARTACEVTEAIESSRFNDAASAIYRFVWNVYCDWYLELAKPVILGEDSPAKSETRAMVAWARDEILKLLHPFMPFITEELWAVTAERTRLLTLTEWPNKADQTRKRRTLIAAADPFIGSEPITDLLEPYFRDDAAEAEIGWVVDLVTAIRSVRAEMNIPPATLAPLVLAGASDESRARAQRWSDVIKRMSRLADISFADQAPAGAVQLLIRGEVAALPLKGIVDVAAQRTRLGKEIAKADADIARVDLKLADQNFIANAPGEIVEDEKEKREAAAARKAKFVEALERLKAAE", - "output": "cytoplasm ; aminoacyl-tRNA editing activity ; ATP binding ; valine-tRNA ligase activity ; valyl-tRNA aminoacylation" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MKKYRRALALVSCLSLCSLVWLPSWHVCCKESSSASTSYYSQDDNCAIGSEDTQFQKKNEREEPSNAELSGKSNSYLTISPEGNKIKDDYTVDVQDLETTKLSLPVVEALPTVDLHEESSSVVVGSETIENSSSSSTSERTPVSELDEVEKSGTLSIAKPGEVEQPEADCDAGEAPDADAPVEQPAFVSPPESLVGQHIENVSSSHGKEKVTKSEFESKVSVSEQDGGDPKSALNTSDTLKNESSDYTKPGETDPTSVTSPKDPEDIPTFDEWKKKVMEVEKEKSQSLHPSSNGGPHATKKVQKNRNNYASVECGAKILAANPEAKSTSAILIENMDLYMLNPCSTKIWFVIELCEPIQVKQFDIANYELFSSTPKDFLVSISDRYPTNKWIKLGTFHGRDERNVQSFPLDEQMYAKYVKMFIKYIKVELLSHFGSEHFCPLSLIRVFGTSMVEEYEEIADSQYQSERQELFDEDYDYPLDYNTVEDKSSKNLLGSATNAILNMVNIAANILGAKTEDLTEGNKSISENATATTEPKMTESTRVSTPVPSPEYVIKEVHTHDREPSTSDPPKESPIVQLVQEEEEEASPSTVTLLGSGEQEDESSSWFESETHILCSELTSICCISSFSEYIYKWCSVRIALYRQRSRTVSKGKDFVPPQPSLLLPVESVEVSVPQPPSGDVDSENMEREAETVDLDDLSSVHQGHLINHTVDTIELEPSYPQTLSQSLLLDVTPEMNSLSKVEGSESVKSEGGYIPSQLMTQESSVEFDDKTEKKTESFSSAEKLSVIYETSKVNEVMDNTVKEDILSTEVVTKFPETVVPPPMNTATVPEGESVETKPSIADTLKHTVTPVMDPSLPEVKEDEQSPEDALLRGLQRTATDFYAELQNSTDLGYGNGNLVHGSNQKESVFMRLNNRIKALEVNMSLSGRYLEELSQRYRKQMEEMQKAFNKTIVKLQNTSRIAEEQDQRQTEAIHLLQAQLTNMTQLVSNLSATVAELKREVSDRQSYLVMSLVLCVVLGLMLCMQRCRTTSQFDGDYISKLPKSNQYPSPKRCFSSYDDMNLKRRTSFPLIRSKSLQFTGKEVDPNDLYIVEPLKFSPEKKKKRCKYKTEKIETIKPADPLHPIANGDIKGRKPFTNQRDFSNMGEVYHSSYKGPPSEGSSETSSQSEESYFCGISACTSLCNGQTQKTKTEKRALKRRRSKVQDQGKLIKALIQTKSGSLPSLHDIIKGNKEITVGAFGVTAVSGHI", - "output": "cytoplasm ; membrane ; rough endoplasmic reticulum ; rough endoplasmic reticulum membrane ; ossification ; positive regulation of collagen biosynthetic process ; positive regulation of osteoblast differentiation ; regulation of bone remodeling" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MGVFNYETETTSVIPAARLFKAFILEGDTLIPKVAPQAISSVENIEGNGGPGTIKKITFPEGSPFKYVKERVDEVDHANFKYSYSMIEGGALGDTLEKICNEIKIVATPDGGSILKISNKYHTKGDHEMKAEHMKAIKEKGEALLRAVESYLLAHSDAYN", - "output": "cytoplasm ; abscisic acid binding ; protein phosphatase inhibitor activity ; signaling receptor activity ; abscisic acid-activated signaling pathway ; defense response ; response to biotic stimulus" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MMVENWPAKPEGSQWTDDQWKAVVAHGRDILVAAAAGSGKTAVLVERIIKKIINEENPVDVDRLLVVTFTNAAAQEMKNRIGEALEKVLIEEPSSRHIRKQLSLLNKASISTIHSFCLQVIRSYYYMLDIDPRFRIANQTENELLKEEVLDDILEEEYGMEENQLFFELVDRYTSDRNDDDLQRMILALHTAAGAHPNPEKWLDRLVEAYNVEGKTIEDLMYASYLLEDVKFQLETATEHIRKAMELAMLPDGPAPRMETLQTDLVLLETLSHAARKSWTSVYEAMQHVSWQTLKRIKKSDYNEDIVKQVDSLRNKAKDEVKKLQEELFSRKPESFLRDFQEMHPVLGKLVQLVKEFSNRFQAIKRDKGMVDFTDLEHFCLQILSEQGEDGELRPSPVALQYRNRFAEVLVDEYQDTNFVQESIIKLVTKDSEQEGNLFMVGDVKQSIYRFRLAEPGLFLGKYKRFTQEGLEGGMKIDLAKNFRSRHEVLAGTNFIFKQIMGEEVGEIEYDADAELKLGASYPEGEDVAAELLCIHQSEEEVLDGEEGEEVEKAQLEARLIAQRIKAMVDSGYTVYDRKTNEMRQVQYRDFVILLRSMPWAPQIMEELKLQGIPVYAELATGYFEATEVNIMMNVFRVIDNPVQDIPLAAVLRSPIVGLNDEELAMLRAHAKKGSFYEVMRSFLRGAPLEGGKELHEKLKWFYHLLQGWREFARQQSLSDLIWKVYRETGYYDFVGGLPGGKQRQANLRVLYDRARQYEATSFRGLFRFLRFIERILERGDDMGTARALGEQEDVVRIMTIHKSKGLEFPVVFVAGLGRRFNTQDLMQRFLLHKDFGFGSQFIDPRKRIKYTTLSQLAIKRKMKRELIAEEMRVLYVALTRAKEKLILIGTVKDKEKEMEKWLDTREHTEWLLPDYVRASASCYLDWIAPSLYRHRDSEILLELGQGTIPNEIYEYDTSWKVEFVDGKTLLAPEPAQEEKQELLEALREKKAVPLESERKDEVYNRLTWKYEYEDATLQRAKQSVTEIKRNYQSEDGSDTAFIQKLRAPIRTRPRFMEKKGLTYAERGTAVHAVMQHVDLKQSITIESIQEQIAKMVNKEILTFEQAEEISVERIVAFFESHLGKRVLEAKSVEREVPFTMMLSAKEAYQNWQGKSEETILVQGVIDCMIEEDDGITLIDFKTDTIEGKFPGGFDQAKPILEERYKVQLSLYAKALEKTLQHPVKEKCLYFFDGNHVITIEE", - "output": "3'-5' exonuclease activity ; ATP binding ; ATP hydrolysis activity ; DNA helicase activity ; double-stranded DNA binding ; isomerase activity ; double-strand break repair via homologous recombination" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MAPQLLLCLILTFLWSLPEAESNVFLKSKVANRFLQRTKRSNSLFEEIRPGNIERECIEEKCSKEEAREVFEDNEKTETFWNVYVDGDQCSSNPCHYRGTCKDGIGSYTCTCLPNYEGKNCEKVLYQSCRVDNGNCWHFCKRVQSETQCSCAESYRLGVDGHSCVAEGDFSCGRNIKARNKREASLPDFVQSQKATLLKKSDNPSPDIRIVNGMDCKLGECPWQAVLINEKGEVFCGGTILSPIHVLTAAHCINQTKSVSVIVGEIDISRKETRRLLSVDKIYVHTKFVPPNYYYVHQNFDRVAYDYDIAIIRMKTPIQFSENVVPACLPTADFANEVLMKQDSGIVSGFGRIRFKEPTSNTLKVITVPYVDRHTCMLSSDFRITQNMFCAGYDTLPQDACQGDSGGPHITAYRDTHFITGIISWGEGCARKGKYGVYTKVSRFIPWIKKIMSLK", - "output": "extracellular region ; calcium ion binding ; peptidase activator activity ; serine-type endopeptidase activity ; toxin activity ; blood coagulation ; envenomation resulting in positive regulation of blood coagulation in another organism ; positive regulation of blood coagulation in another organism ; positive regulation of peptidase activity ; proteolysis" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MGRSYYVDDRVEKYFSKLVQQQKACITGLIIGQYSSQRDYAVLTAQTPQKEDQNEEKKPGLSKLEEIDDEWVSMHASQVGRMLPGGLMVLGVFLMTTPDLSKDAQTILRKLVFAVEKSSMKNRLWNFDEDDVSERVTLHICSSTKKITCRTYDINDPKSTPKPADWKYQNSVLSWLTVDCNVRVDVTIPLTSPSLTYQERQKSIRLGLVKWTKEIEDSVVLFNGQYKDKNGDLFEEQKKSSRSSSHYSPQIITANFLNASPLIDNTRSTALVQPCKSSLTIQGVMKCRGFIHSNRPKVKDAMQAIKRDLLNTIQDRCELLFEDMMLNGPSNENDACPLPQRVFVPINGSNLKLCDYLFGDETTSDLQSHFLEIMDQEVEQNELDFTEKKCELAHPEKRESEPASQHLESKPENKARSSSTSLLNKGLVISTIVASIAIIISFYYIM", - "output": "membrane" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MVLAGRGMPGTKECLICLTALLLAAAAAAMINGVLDAKLDARMARLHRRVASLERIGAQRATVAAAGMLFAALALSITFLPRLTTALILLAIFSYTPLYTLWFKRRSPWGVVPGGIPGALPVLVGASAVSGTISSAPLILFLVMLLWQPPHFWALALKHQDDYRRAGVPTLPLVRGEAYTKVCIFVFAALLLPASLALWFTGACSARFAIEALCLGFFNLFSCYLYLVKNRRFQRAFQASIFYLLGLLSAVIIDICSRP", - "output": "plasma membrane ; protoheme IX farnesyltransferase activity ; heme O biosynthetic process" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MSFHSFYQRASSLFKAYPSTSKILLLSTFSGGGGVLVYSDSNPLKRILHADATLDSDGNPIRKKKVVVLGSGWSGYSFLSYLNNPNYDVQVVSPRNFFLFTPLLPSVTNGTVEARSIVEPIRGLMRKKGFEYKEAECVKIDASNKKIHCRSKEGSSLKGTTEFDMDYDILILAVGAKPNTFNTPGVEEHAYFLKEAEDALNIRHSVIDCFERASLPNLTEEERKKILHFVVVGGGPTGVEFSAELHDFLVQDVAKIYPKVQEFTKITLLEAGDHILNMFDKRITAFAEEKFQRDGIDLKTGSMVVGVTADEISTKERETGKIVSEPYGMVVWSTGIGSRPVIKDFMQQIGQGQRRVLATDEWLRVEGCDGVYALGDTATINQRRVMEDIAAIFNKADKGNTGTLKKKDFNSVVKDICQRYPQVELYLKKNKLKNIANLLKSANGEDTQVNIEKFKQALSEVDSQMKNLPATAQVASQQGKYLAKCFNKMEKCEKKPEGPLRFRGEGRHRFQPFRYRHFGSFAPLGGEQTAAELPGDWVSIGHSSQWLWYSVYASKLVSWRTRMLVISDWTRRFVFGRDSSSI", - "output": "extrinsic component of mitochondrial inner membrane ; mitochondrial intermembrane space ; mitochondrion ; peroxisome ; calcium ion binding ; NADH dehydrogenase (quinone) activity ; oxidoreductase activity ; NADH oxidation" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MSKISFDAQSISNSLRAAKHQPRKRFGQNFLHDRSVIREIVESIRLERDDNLIEIGPGMGALTEPLLAEVDAMTVVELDRDLADSLRIRIGANSHPNFTIIKDNAMHVDYRELYSEERGKLRVVGNLPYNISTPILFHLLSYADVIEDMHFMLQKEVVERITADVGSKTYGRLSVIMQYHCHTDYLLTVPRGAFNPPPKVTSAVFRLTPHIIKPVVAEDEEYFALVVRETFNHRRKTLRAIFKKSTLLPTLSEDDFAACAIDPQARPETLNVKDFVNLSNQARTIPV", - "output": "cytoplasm ; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity ; RNA binding" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MVSFSSLALALSTVVGVLAAPGSEKYVELAKHQLTHSQTGTKNGYYYSFWTDNRGQVSYTNGKGGQYSVNWKDCGNFVAGKGWNPASAKTVTYSGNWKPSGNSYVSVYGWTQNPLIEFYIVESFGSYNPSTGATELGTVESDGGTYKIYKTKRVDAPSIEGKKTFDQFWSVRTSHRVGGTVTTKNHFNAWAKSGLKLGTFNYMILATEGYHSSGSATMTVS", - "output": "extracellular region ; endo-1,4-beta-xylanase activity ; xylan catabolic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MRAFYGTELPNPLMLGTAQYPSPAILEQAFRASGAGVATVSLRRESGAGQTFWSMIRDLGVLILPNTAGCHTVKEAVTTAHMAREVFGTPWIKLELIGHTDSLQPDVFGLIEAARILTEDGFQVFPYTTDDLIVGERLLAAGCEVLMPWGAPIGSGRGLNNEYALRAMRAEFPDTPLVVDAGIGLPSHAARALELGYDAVLLNTAVARAGDPVEMARAMALAIQAGQLAHRADPIEARDMASASTPVIGKAFLS", - "output": "cytoplasm ; thiazole synthase activity ; thiamine diphosphate biosynthetic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MARPQPCGPPHARCGSPSLPERPLQVKVVGLFSCPNFQIAKSAAENLKNNHPSKFEDPILVPLQEFAWHQYLQEKKRELKNETWEYSSSVISFVNGQFLGDALDLQKWAHEVWDIVDIKPSALYDALTEDFSAKFLRDTKHDFVFLDICIDSSPIGRLIFELYCDVCPKTCKNFQVLCTGKAGFSQRGIRLHYKNSIFHRIVQNGWIQGGDIVYGKGDNGESIYGPTFEDENFSVPHNKRGVLGMANKGRHSNGSQFYITLQATPYLDRKFVAFGQLIEGTEVLKQLELVPTQNERPIHMCRITDSGDPYA", - "output": "cytoplasm ; protein folding ; protein peptidyl-prolyl isomerization" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MSHITFDYSKVLESFAGQHEIDFLQGQVTEADKLLREGTGPGSDFLGWLDLPENYDKEEFARILTAAEKIKSDSEVLVVIGIGGSYLGAKAAIDFLNHHFANLQTAKERKAPQILYAGNSISSTYLADLVEYVQDKEFSVNVISKSGTTTEPAIAFRVFKELLVKKYGQEEANKRIYATTDKVKGAVKVEADANNWETFVVPDNVGGRFSVLTAVGLLPIAASGADITALMEGANAARKDLSSDKISENIAYQYAAVRNLLYRKGYITEILANYEPSLQYFGEWWKQLAGESEGKDQKGIYPTSANFSTDLHSLGQFIQEGYRNLFETVIRVDNPRKNVIIPELAEDLDGLGYLQGKDVDFVNKKATDGVLLAHTDGGVPNMFVTLPAQDEFTLGYTIYFFELAIAVSGYMNAVNPFDQPGVEAYKRNMFALLGKPGFEALSAELNARL", - "output": "cytoplasm ; carbohydrate derivative binding ; glucose-6-phosphate isomerase activity ; carbohydrate derivative metabolic process ; gluconeogenesis ; glycolytic process" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MTATAQQLEYLKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIDLLVERYKNAGINKVVGTEARGFLFGAPVALGLGVGFVPVRKPGKLPRETISETYDLEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINLFDLGGEQRLEKQGITSYSLVPFPGH", - "output": "cytoplasm ; adenine phosphoribosyltransferase activity ; adenine salvage ; AMP salvage ; purine ribonucleoside salvage" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MKMDERKQQILLAIIKDYINTAEPVGSRTISRKYKLGVSPATIRNEMSDLEEMGYIEQPHTSAGRIPSNLGYRYYVDCLMQREQLSEEEEVTIRRGYENKVREVGEVLNRTGRMMAQLTHYTALVQMPSFRRSAYKHVQMVLMGPSQAILIVVMDTGAVHHQMMTVPESITQQDLDQISSVLNAKLQGRTMDNIRLTLIKEIYFELSKHRSILDLALELMQDRVISVAEDKIYLEGVFNILNQPEFHNVERVKILLSLLEQEDTLKDILDFTRDRQGITIKIGNENLRQEIQDCSMVTATYQVGDKILGTIGVLGPTRMDYARVVTVIDCMSRNLSRTLDRILKGQV", - "output": "DNA binding ; negative regulation of DNA-templated transcription" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MAEGRIIKALSGFYYVQSDNQQFVCKGRGLFRNKKITPLVGDYVEFEPKDDNEGYIMEIKERSNELVRPPIANIDQAIIVSSAVDPDFTTLLLDRFLVLIESKHIQPIILITKVDLLNEDQLENIKLYKQHYEKIGYRVELVSSKNQDLLPELEPYFDEKVSVFAGQSGVGKSSLINVLDPSLLLETAEISKSLGRGKHTTRHVELMKIGNGLVADTPGFSVLEFREIEAEELADSFPEFNARMHLCKFRGCMHDKEPKCAVKEAVENEEIAVFRYNHYLRFLEEIQTRKPRY", - "output": "cytoplasm ; GTP binding ; GTPase activity ; metal ion binding ; rRNA binding ; ribosomal small subunit biogenesis" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MNSTEPDSARVTRTDRLDPPEIADVLTLARAAGDADGADPFDEHTLLRLRDPHAPAHHLTVRAADGILAGYAHLDSTDPAAGTGVELAVHPTYRRQGIGRALARAVRATVTGPLRAWAHGDHPSAAALAVDLGYRRARVLWQLRRPLSAPIPQPPLPEGVTLRAFRPGTDDDAWLALNARAFADHPEQGRWTSADLRARRDEPWFDAAGFLLAVDPAGHLRGFHWTKVHERPGSPRIGEVYVLGVDPQAHGGGLGKALTAAGLAYLRDRRGLDRVMLYVDESNTAAVALYERLGFARWSAHVNYQRS", - "output": "mycothiol synthase activity ; mycothiol biosynthetic process" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MPNRRGSRNAYYFFVQEKIPELRRRGLPVARVADAIPYCSADWALLREEEKEKYSEMAREWKAAQGKDAGPWEKQKPVSTPLRRPAMLVPKQNVSPPDMSCLSLKSDQALLGGIFYFLNIFSHGELPPHCEQRFLPCEIGCVKYSLQEGIMADFHSFINPGEIPRGFRFHCQAASDSSHKIPISHFESGHDQATVLQNLYRFIRPNSGKWPPIYCKSDDRARVNWCLKYMAKSSEITQDLELVTVEDLVVGIYQQKFLKEPSKTWVRSLLDVAMWDYSSNTRCKWHEENDILFCALAVCRKIAYCISNSLATLLGIQLTEAHVPLQDYETSNSVTPKMVVLDAGRYQKLRVESSGFSHFSSSNQEQRSNTPTGDYPSGVKISGQSSSVRGRGITRLLESISNSSSNIHKFSTCESSLSPYMSQKDGYKSFSSLS", - "output": "cytoplasm ; nucleus ; P granule ; piP-body ; sequence-specific DNA binding ; cell differentiation ; DNA methylation involved in gamete generation ; male meiotic nuclear division ; negative regulation of DNA-templated transcription ; piRNA processing ; regulation of miRNA-mediated gene silencing ; RNA-mediated gene silencing ; spermatogenesis" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MVAPTALKKSDVSEGTVPVTTTSRIVGVDNTEKIDEDDDDADVLIDQDGDAMLVDEENNEESNKKKEDAGVVLDAEGKPRFTSAASSAQTKVKLESRKVSVPPHRMTPLKNNWSKIYPPLVDHLKLQVRMNLKTKSVELRTHPKHTTDPGALQKGADFIKAFTLGFDLDDSIALLRLDDLYIETFEIKDVKTLQGDHLSRAIGRIAGKDGKTKFAIENATRTRIVLADSKIHILGGFTHIRMARESVVSLILGSPPGKVYGNLRTVASRLKERY", - "output": "cytoplasm ; nucleolus ; RNA binding ; ribosome biogenesis" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MAYSYTEKKRIRKDFGKLPPVLDVPYLLAIQLESYRNFLQEGKSLAERGELGLHGAFKSVFPMVSFSGNAALEYVDYRLGKPVFDVKECQLRGVTYAAPLRVRVRLIIYDKESSNKAIKDIREQEVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDHDRGKTHSSGKLLHSARIIPYRGSWLDFEFDPKDCVFVRIDRRRKLPATILLRALGYGTEQILDTFFDSTRFYLKRDGFEMDLVANRLRGETALFNIADANGELIVEEGRRITAKHIRVMEKSGLERLSVPLEYMLGKVTAKNLVHPATGELIAEANTELSVDLLEALVSSGITEVDTLYTNDLDNGPFISDTLRIDPTSNQLEALVEIYRMMRPGEPPTKESAEGLFQGLFFSEDRYDLSGVGRMKFNRRLGREEDTGAGVLDNDDIVAVLKTLLDIRNGNGMVDDIDHLGNRRVRSVGEMAENQFRVGLVRVERAVKERLSMAEADGLMPQDLLNAKPVAAAIKEFFGSSQLSQFMDQNNPLSEVTHKRRVSALGPGGLTRERAGFEVRDVHATHYGRVCPIETPEGPNIGLINSLSTYARTNSYGFLETPYRKIVDGKQTDETVYVSAIDEAKYVIAQASANVDAEGRLVDELVQVRHMHETTLIPKEKVNLMDVSPRQVVSVAASLIPFLEHDDANRALMGSNMQRQAVPTLKADKPVVGTGMEKNVAKDSGVCIVANRGGVIESVDASRIVVRVNSEETIAGEAGVDIYNLTKYVRSNQNTCINQRTLVMKGERIASGDIMADGPSVDMGELALGQNMRIAFMPWNGFNFEDSILVSERVVEEDRFTSIHIQELTCVARDTKLGPEEITADIPNVGEGALSKLDQSGIVYIGAEVEPGDILVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDTSQRVKTGTRGTVIDVQVFTRDGIEKDDRAKFIEKSQLDQVRKDLNEEFRIVEKATFERLAEALIGQQAEGGPGLARNAIITEEYLANLDHPEWFKIRVANEDASEQLEKAQAALIERRKELDAKFEDKKRKLQTGDDLAPGVLKIVKVYVAIKRRIQPGDKMAGRHGNKGVISKIMPVEDMPYDENGDPVDIVLNPLGVPSRMNVGQVLETHLGAASKGLGRKINEMLVVEREKAEAVAELRSFLGEIYNGYEGDLRCARTEDLDSFTDEEILTLASNLTGGVPMASGAFDGAKESEIKRMLRLAGINESGQVKLFNGRTGDAFERPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGDHRMEPGMPESFNVLVKEIRSLGIDIELENE", - "output": "DNA-directed RNA polymerase complex ; DNA binding ; DNA-directed 5'-3' RNA polymerase activity ; ribonucleoside binding ; DNA-templated transcription" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MNHLNKLMERLGHQFNNLELLKIALTHCSSGADNNERLEFLGDSVLGFIIASELYQRRPQAREGDLSRMRASMVNGDELAQMSTKLGINEYLQLGVGEQKSGGKRRRSILADALEAIVGAIYIDAGLETCRRCVLNWYGERVDDLSKLSPKKDAKSLLQEWLQARRLPLPTYEVKITGEAHAQTFTVNCYVKGLPHKTEGVNTTRRRAEQIAAKRFLELLDDGKGDGITERDQ", - "output": "cytoplasm ; metal ion binding ; ribonuclease III activity ; rRNA binding ; mRNA processing ; rRNA processing ; tRNA processing" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MEIKEEGASEEGQHFLPAAQASDPGDCQFTSIQKTPNEPQLEFILACKDLVAPVRDRKLNTLVQISVIHPVEQSLTRYSSTEIVEGTRDPLFLTGVTFPSEYPIYEETKIKLTVYDVKDKSHDTVRTSVLPEHKDPPPEVGRSFLGYASFKVGELLKSKEQLLALSLRTSDGGKVVGTIEVSVVKMGEIEDGEADHITTDVRGQKCALVCECTAPESVSSKGEKTLEFVPVNLHLQRMQVHSPHLKDALYDVITVGAPAAHFQGFKNGGLRKLLHRFETERRNTGYQFIYYSPENTAKAKEVLSNINQLQPLVATHADLLLNSASQHSPDSLKNSLKMLSEKTELFVHAFKDQLVRSALLALYTARPGGVLKKPPSPKSSTEESSPQEQPPLMRRQDSIPHHSDYDEEEWDRVWANVGKSLNCIIAMVDKLIERDGGSEGSGSNNDGEKEPSLADSIPSHPREDWYEQLYPLILTLKDCMGEVVNRAKQSLTFVLLQELAYSLPQCLMLTLRRDIVFSQALAGLVCGFIIKLQTSLYDPGFLQQLHTVGLIVQYEGLLSTYSDEIGMLEDMAVGISDLKKVAFKIIEAKSNDVLPVVTGRREHYVVEVKLPARMFESLPLQIKEGQLLHVYPVLFNVGINEQQTLAERFGDVSLQESINQENFELLQEYYKIFMEKMPPDYISHFQEQNDLKALLENLHQNIQSKKRKNVEIMWLAATICRKLNGIRFTCCKSAKDRTSMSVTLEQCSILRDEHQLHKDFFIRALDCMRREGCRIENVLKNIKCRKYAFNMLQLMAFPKYYRPPEGTYGKADT", - "output": "inositol-1,3,4-trisphosphate 4-phosphatase activity ; inositol-3,4-bisphosphate 4-phosphatase activity ; phosphatidylinositol-3,4-bisphosphate 4-phosphatase activity" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MERPEPELIRQSWRAVSRSPLEHGTVLFARLFALEPDLLPLFQYNCRQFSSPEDCLSSPEFLDHIRKVMLVIDAAVTNVEDLSSLEEYLASLGRKHRAVGVKLSSFSTVGESLLYMLEKCLGPAFTPATRAAWSQLYGAVVQAMSRGWDGE", - "output": "heme binding ; metal ion binding ; oxygen binding ; oxygen carrier activity ; oxygen transport ; response to hypoxia" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MSRRFAEYESLDLSRVNEEVLADWMQHRLFEESLKSREGAPSFVFYEGPPSANGMPGIHHVMARAIKDTICRYKTMKGFRVDRKAGWDTHGLPVELGVEKSLGITKEDIGKSISVEEYNAACRRDVMKFTKEWEDLTHKMGYWVDMEHPYITYDNRYIETLWWLLAELYKKGLLYKGYTIQPYSPAAGTGLSTHELNQPGCYRDVKDTTCVAQFKIMDPKPEMQLHGDAFFLAWTTTPWTLPSNTALCVGPEIEYLAVQTFNPYNGIPITVVLGKPLLHTLFNPKGECEEIPASYDPAQKLLPYKVIASWKGKELEGMRYEQLIPWVNPGEGAFRVITGDFVTTEDGTGIVHIAPTFGADDDRVAKKSGVPPLMLRDKEGNMRPMVDLAGRYFPTTDLDPVFVEKHMDLPLYDVYAGRYVKNAYDAGKTEKDETLDVELCVMLKMQNRVFRIEKMTHNYPHCWRTDKPVLYYPLDSWFIRTTACKEEMIANNGKIYWKPESTGTGRFGKWLENLQDWNLSRSRYWGTPLPIWRTEDGSEEICIGSVEELYNEIEKAVKAGMMERNPWAGFKPGVYTEENYAKIDLHRPFVDGITLCSPSGQPMRRELDLIDVWFDSGAMPYAQMHYPFENRERVEDGSVFPADFIAEGVDQTRGWFFTLHAIATMISGTSSFKVVVSNGLVLDKKGNKMSKRLGNAVDPFETIKKYGSDPLRWYMITNSSPWDNLKFDTDGVEEVRRKFFGTLYNTYQFFALYANLDGFTGEEESIPFAKRPEIDRWILSELNTLIREVDDQLSDYEPTRAGRAISDFVSENLSNWYVRLSRRRFWAGDMTEDKLSAYQTLYTSLLTVSKLMAPISPFYADRLYRDLTGKDESVHLALFPRPDQSQVDRALEQSMQMAQQISSMVLALRRRVNLKVRQPLATLMIPAIDDEQRRCIESVQPLILSEVNVKELRFVDDSMGILVKRIKPDFKRLGPRYGKVMKALAEAVTAMTQEEIRSLEKAGTFRMEVAGTPVELELADVEIVSEDIPGWLVANEGNLTVALDITVTDELRSEGLARELVNRVQNIRKQSGFEVSDKVDVLLLSNDIMDKVVAEHHDYIAQQIQAESLEISDAVSDGVELDFDDFVLSIQVVKHQG", - "output": "cytoplasm ; aminoacyl-tRNA editing activity ; ATP binding ; isoleucine-tRNA ligase activity ; tRNA binding ; zinc ion binding ; isoleucyl-tRNA aminoacylation" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MIQMQTNLDVADNSGARRVMCIKVLGGSKRKYASIGDIIVVSIKEAIPRGRVKKGDVMKAVVVRTAKDIRRPDGSVIRFDTNAAVLIDNKKEPIGTRIFGPVPRELRAKNHMKIISLAPEVL", - "output": "large ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MGQKVHPIGIRLGIVKEHTSVWYADGRTYADYLLADLNVREYLQDKLKSASVSRIDIHRPAQTARITIHTARPGIVIGKKGEDVEKLRQDLTKQMGVPVHINIEEIRKPELDGMLVAQSVAQQLERRVMFRRAMKRAVQNAMRIGAKGIKIQVSGRLGGAEIARTEWYREGRVPLHTLRADIDYATYEAHTTYGVIGVKVWIFKGEVIGGRQEELKPQAPAPRKKAAK", - "output": "ribonucleoprotein complex ; ribosome ; mRNA binding ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Predict the GO term based on the protein sequence.", - "input": "MAERSQNLQDLFLNSVRKQKISLTIFLINGVKLTGIVTSFDNFCVLLRRDGHSQLVYKHAISTIMPSQPVQMFEGEEA", - "output": "RNA binding ; regulation of DNA-templated transcription" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MGSEPRFEPRPELIDLPVLQKFKLYATPSNFYLIGRDENKSFRRILKIDRRDQNELNLFEDPTRYTKDEMRELKRRMIVGNEESGGFKAITTCYGIIGFVRFLEPYYMLLITKRKKVGEICGHTVYGIAESQMIAIPHPSIQSKVAKSEAELRYKKLLSVVDLSKNFYFSYTYHLMYSLQKNIGNTERGNPHDNTMFVWNSFLTREIRKILQNSIWTVALIYGFFQQTKCSVSGEKFVFTIIARRSRHYAGTRYLRRGVNDIGRVANDVETEQIVSKVVPAGQKIPITSVVQVRGSIPLFWSQEASVFNPQPEIILNKKDANYEATQHHFQNLRQRYGNRIIILNLLKTVTGEKKHRETILRGEFAKTIRFINKGMDREHRLKAIHFDLSKHYKKGADGAFNHLCIFSRKSLELTDLFYCKAPSGVGAEEVIYDSFFNNPIPSQDEEASSPEKEDMKADIFLLQNGVLRTNCIDCLDRTNFAQYAHGLVSLGHQLRTLGISGPPVVDLNNPLAIELMDAYQKMGNTLAMQYGGSEAHSKMFCDLRGNWNMVMRQRDIFTAVRRYYSNAYQDSDKQNAINVFLGHFRPRLGRPALWELDSDQHNIGRSGSNLDIENMRPLIRRSFSDNIIMDCDLNLEELVRENSQPTYEGLNGGVSGTNLEFPFYETEPASLSFLSVMRNEELMRETGSGQMFQGSSSNSDSHRPNDIPGFSHSYVTKFTPAEDIFERGSSKSVSSDNLFTDRDESVTSLTNTNSSFEFPIMGGSDLLPGFSNAFARWVFSARAW", - "output": "intracellular membrane-bounded organelle ; vacuolar membrane ; phosphatidylinositol-3,5-bisphosphate 5-phosphatase activity ; phosphatidylinositol dephosphorylation" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MKEIAVTIDDKNVIASVSESFHGVAFDASLFSPKGLWSFVDITSPKLFKLLEGLSPGYFRVGGTFANWLFFDLDENNKWKDYWAFKDKTPETATITRRWLFRKQNNLKKETFDDLVKLTKGSKMRLLFDLNAEVRTGYEIGKKMTSTWDSSEAEKLFKYCVSKGYGDNIDWELGNEPDHTSAHNLTEKQVGEDFKALHKVLEKYPTLNKGSLVGPDVGWMGVSYVKGLADGAGDHVTAFTLHQYYFDGNTSDVSTYLDATYFKKLQQLFDKVKDVLKNSPHKDKPLWLGETSSGYNSGTKDVSDRYVSGFLTLDKLGLSAANNVKVVIRQTIYNGYYGLLDKNTLEPNPDYWLMHVHNSLVGNTVFKVDVSDPTNKARVYAQCTKTNSKHTQSRYYKGSLTIFALNVGDEDVTLKIDQYSGKKIYSYILTPEGGQLTSQKVLLNGKELKLVSDQLPELNADESKTSFTLSPKTFGFFVVSDANVEACKK", - "output": "membrane ; hyaluronoglucuronidase activity ; transferase activity ; hyaluronan catabolic process" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MTLPPSCRWSGDHLELLDQRQLPGAVVFMQLRRWQQVAEAISSMAVRGAPAIGIAAAWGVVLAARSGDDLLTAFRGLRASRPTAVNLRWALNRMQAAMGSSASVDVEALTDAAAALQREDCVLTQRLVDHGVSLLAQGCRVLHHCHTGAIATGGVGTALGVIAAAHARGLLRHAWLDETRPRLQGAALSAWELGCLGVPCTVIVDGASGLLMRRGEVDAVMVGCDRVSANGDVANKIGTYNLALVARAHGIPFYVCAPGSSIDRATVDGEAITIEERDAEEITHVRGMDVAAPGAQVWNPAFDITPAHLVTGFITEFGVLRPPYREVLSELPLPNQL", - "output": "S-methyl-5-thioribose-1-phosphate isomerase activity ; L-methionine salvage from methylthioadenosine ; L-methionine salvage from S-adenosylmethionine" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MIEIPTGLPAELVPLSWLLGVWEGSGVVEYAVGDETVRREFGQRISFSHDGLPHLNYSSYAWIEGDDGPVPFVTETGYWRLRRRVTDGDPGPAMLPPTDERPFTTAEEVETLCNADGGFDVEVALVHPGGVSELYVGQVKSARIDLATDAVLRTEGAKSYTGATRLYGFVERDLLWAWDIAALGQPLRTHASGRVSHVD", - "output": "heme binding ; metal ion binding ; peroxynitrite isomerase activity" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MANNAAACAERATNDMLIGPDWAINIELCDIINMEPSQAKEAVKVLKKRLGSKNSKVQILALYALETLSKNCGESVYQLIVDRDILPDMVKIVKKKPDLTVREKILSLLDTWQEAFGGSGGRFPQYYNAYNELRSAGIEFPPRTESSVPFFTPPQTQPIVAQATASDEDAAIQASLQSDDASALSMEEIQSAQGSVDVLTDMLGALDPSHPEGLKEELIVDLVEQCRTYQRRVMALVNTTSDEELMCQGLALNDNLQRVLQHHDDKAKGNSVPATAPTPIPLVSINHDDDDDESDDDFLQLAHRSKRESARGTGQGNFNPILPPPPSSMRPVHVDSGAMDFLSGDVYKPQETFENVKPPSTSQSSNHDYSAPIFDEPVPQSKSPEHALFTKPVYDQTEQLPPAPWETQEPRKYPPSMSARTNKRPEYFQHNVPQHSSSASESSYDDLLGQSRNLSLNPTASAAPVTPPKKDDKPEDILFKDLMDFAKTRTSSSSSSKPNNQNNKPF", - "output": "membrane ; phosphatidylinositol binding ; ubiquitin binding ; protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MGTARFLRAVLLLSVLLMVTFPALLSAEHHDGRVDICRLPSDSGDCLRFFEMRYFDGTTCTKFVYGGYGGNDNRFPTEKACMKRCAKA", - "output": "extracellular region ; potassium channel regulator activity ; serine-type endopeptidase inhibitor activity ; toxin activity ; envenomation resulting in negative regulation of voltage-gated potassium channel activity in another organism ; negative regulation of peptidase activity" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MENNTASSPYTKLELVGRGSYGAVYRGICNLTKETVAIKILNLDTDEDEVSDIQKEVAVLSELKQSDVENIIKYHGSYLVGTNLWIIMDYCHGGSVRTLMEAGPISEPCISLILRETLQALKFIHHAGIIHRDIKAANILVSMSGNVKLCDFGVAAELNINRRKRITFIGTPYWMAPEVIRDGQEYNVMADIWSLGITAYEIATGSPPHAKEDPFRAVYLIAHTAPPRLNGNFSALLKEFIASCLQDVPQRRLDSSELLKSKFIKQYSRMSISELTNVVKRYDTWQAAGGIPQTLLLGEEADDGSDPDQETSDTAASDDGWEFGTIKQGQSNVSSITGTSTSTTTAATSSTTVTGTVIPKSSTVHEPPSSNDSHPLLQLFKDSKISDDDSPSNAEGASTEDSKGEVSYSQIELPSLDSSNLSSKKSTIQSKHTKQAEDYDLFVGRTRSNSKTSSDQSIKRPLPRVVQRQKTSLGKRGISMSPMKPGLRMPSSFDLQSRSISMGAFEQLSTPLEAPAHKHSAVLQPLEVNRSISIPPPKSISPSILHKPSLESASSTPKISSCSSTPKPFNSKLRAHLPPLSIGSPAVQPLANDNYDSLGVRGLNMELFNDYPGNMHNIKSVLSLEIDIVLGEMDACLKSLECNLLNRKAYNE", - "output": "actin cortical patch ; cell division site ; cytoplasm ; cytosol ; mitotic actomyosin contractile ring ; mitotic spindle pole body ; new mitotic spindle pole body ; ATP binding ; protein kinase activity ; protein serine kinase activity ; protein serine/threonine kinase activity ; establishment or maintenance of actin cytoskeleton polarity ; establishment or maintenance of cell polarity regulating cell shape ; positive regulation of establishment or maintenance of bipolar cell polarity regulating cell shape ; protein localization to medial cortex ; protein phosphorylation ; RAM/MOR signaling pathway ; regulation of establishment or maintenance of bipolar cell polarity regulating cell shape" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MAAAALGSSSGSASPAVAELCQNTPETFLEASKLLLTYADNILRNPNDEKYRSIRIGNTAFSTRLLPVRGAVECLFEMGFEEGETHLIFPKKASVEQLQKIRDLIAIERSSRLDGSNKSHKVESSQQPAASTQLPTTPSSNPSGLNQHTRNRQGQSPDPPSASTVTPDSAILGVLQSNIQHVLVYENPALQEKALACIPVQELKRKSQEKLSRVRKLDKGTNISDEDFLLLELLHWFKEEFFHWVNNILCSKCGGQTRSRDRSLLPNDDELKWGAKKVEDHYCDACQFSNRFPRYNNPEKLLETRCGRCGEWANCFTLCCRALGFEARYVWDYTDHVWTEVYSPSQQRWLHCDACEDVCDKPLLYEIGWGKKLSYVIAFSKDEVVDVTWRYSCKHEEVIARRTKVKEALLRETINGLNKQRQLFLSENRRKELLQRIIVELVEFISPKTPKPGELGGRISGSVAWRVARGEMGLQRKETSFIPSENEKISKQLHLCYNIVKDRYVRVSNNNQTISGWENGVWKMESIFRKVETDWHMVYLARKEGSSFAYISWKFECGSVGLKIDSISIRTTSQTFQTGTIEWKLRSDTARVELTGDNNLHSYADFSGATEVILEAELSRGDGDVAWQHTQLFRQSLNDHEENCLEIIIKFSDL", - "output": "cytoplasm ; metal ion binding ; peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity ; glycoprotein catabolic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MKNISLLGASGSIGTQTLDVLRSHPDQFRLVAFSVGKNIDYAVKVIQEFSPQIVSVQREEDVLKLQAVSGNTKIVYGSEGLLEVALHPDAEIVVNAVVGSVGLLPTLRAIEAKKTIGIANKETLVTAGHLVMEAARKHNVSLLPVDSEHSAIFQCLNGENEKRISRLIITASGGSFRDKTRDELHHVTVEDALRHPNWSMGSKITIDSATMMNKGLEVIEAHWLFGIPYEQIDVVLHKESIIHSMVEFEDRSVMAQLGSPDMRVPIQYALTYPDRLPLSDTKQLNLWEMGTLHFEKMNQERFRCLRFAYEAGKTGGSMPAVMNAANEVAVEAFLQKRIGFLTVEDLIEKAMNHHNVIARPSLEEILEIDATTRRFVMEQI", - "output": "1-deoxy-D-xylulose-5-phosphate reductoisomerase activity ; metal ion binding ; NADPH binding ; isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway ; terpenoid biosynthetic process" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MDKDWFEVSVITSSEAVEAVTGILYNTPVKGVAIEDSKDVEFKKKHPGDWDYFDESLLNVKDGAVIKAYYKDDHNFDESVKYIEESIDKLSEFGINKGEGKVFVNKVNETDWENNWKKYYKPTKIGARIVVKPLWEEYTPKDYELMLNMDPGMAFGTGTHETTRMCIQALERYVNEDAEVFDIGTGSGILAIAAAKLNAKKVLGVDLDSVAVKAAKENIQYNNVNNIEILHGNLMEVVQGKADIIVANIIADVINILIPDINKFLKTDGYFISSGIIKDRAEDVIENLKKNKFEIIEVNNQGEWICIVAKL", - "output": "cytoplasm ; histone methyltransferase activity ; protein methylation" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MSPKTETKASVGFKAGVKDYRLTYYTPEYETLATDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYHIEPVAGEENQYIAYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPAYSKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKAQAETGEIKGHYLNATAGTSEEMMKRAVCARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAVIDRQRNHGIHFRVLAKALRMSGGDHIHAGTVVGKLEGERDVTLGFVDLLRDDFIEKDRSRGIYFTQDWVSMPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLAREGNEVIREASKWSPELAAACEVWKEIKFEFEAMDVL", - "output": "chloroplast ; magnesium ion binding ; monooxygenase activity ; ribulose-bisphosphate carboxylase activity ; photorespiration ; reductive pentose-phosphate cycle" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MTNIRKTHPLMKIINHSFIDLPAPSNISSWWNFGSLLGICLIIQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWLIRYLHANGASMFFICLFLHVGRGLYYGSYLFLETWNIGVLLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGSDLVQWIWGGFSVDKATLTRFFAFHFILPFIVAALAGVHLLFLHETGSNNPSGLSSDADKIPFHPYYTIKDILGVLFLFLILTSLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILVLALIPLLHTSKQRSMMFRPFSQCLFWILVADLITLTWIGGQPVEHPFIIIGQLASILYFLLILVLMPITSVLENNLLKW", - "output": "mitochondrial inner membrane ; respiratory chain complex III ; metal ion binding ; ubiquinol-cytochrome-c reductase activity ; respiratory electron transport chain" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MASALLCFLAAILPGMIAAQNTWVLGTSDVRTVEPVNPVGGGVSLGGIDIDSTENRIIVQNTGIAVPFGREKAIDPNSELVINVQAGDSCSIKVLPRQSDPLSQIPGRLVPPSFPCDFSPGEVKYVHFGSRKPQTDKVKLQLRYDTATDVYIIPFTIDVRVESKQLEIVTRNVPLVVQDLMGTSDALDADKLEFEFDSNTEVCKVTVLSSTSGLPRYGEVMNHDEQGQMIDCNDFLELGIQYRHTAATSSPREDYIPLVVELQNQQGQVIKQEYFQSMVRIIDGDDNTPPSLVLSSDMMMEVDQFVMTAITPSILAAEDVETPADMLIFNITSQTLGPDDGMIVSTDDRNQPITSFTQKDLRDLKIAYKPPPRDTDVQTIYQIELEIVDSELATSETHSLLIVVKPKNTLAPVVTTNTGLVLFEGQSRPLLGGQNLGISDEDNLQDVIIAPINGSRYGELRIGNQRIKQFTIADLIEGAVTYHHYGTDTYSDNIIFRMTDGQHEVEFLFPITIAPIDDEAPIVDVNTGVTVNENEVVAITNFVLSATDIDSDDSEIRFVLEQPLSDMGNLFLRQVNIPEDPQNWISQDNFYEREVTEFTLEDIQNGHLFYQHGGSHNADPVFDRILFRVVDSADPQPNESPVQELLVKVMPQDLQPPEMFGGTTLQLSVDEFQITPILKKNLRFTDMDSNDRELKYTIVSPLTDSDSNNNLPVGDIVLTDEPNTPINMFTQAQINHMKVSYKPPSTELGIAPRAITFQFVVQDTQGNMGSPHNFIILLRPVDNQPPTITNTGVQVFERGTVIIDQTMLDATDPDTDRNSIRVVLVQPPVFGTMNLNDIALEKGDEFTLGDIENSRVKYVSGDAEEQSDEIHLEITDGVHVVPIVIHINVAPIDDEAPTLDLPPGTIGSFLEVQENSFSLITSNILSASDPDTEDLLLTFIVDRQPNEGRIESNGVVADVFTQQDIVNGLVRYVHTGGEIGPSKRDDSFNLTLSDMSPDWILGGNEITQVEVYVTVLPVDNLAPNVTMGVQFYVDEAGKGNINMTHLQAPDVDTEDDDILCTIVVAPSVGYLENISPAPGSEKSRGGMPISAFSIKDLRLNHINYVQSIHQGMEPEEDQFTFRCTDGVNESPNFLFPINIIPVNDEEPQVYAREIIVDEGGQRIIDEPLLRAEDGDVPADELHFFIVTPPQHGTITYTRLEGDIPILNFTMDQIANGNDIKYIHDDSETTEDSFTVLLTDGKYEITKEITITILEVDDETPRLTINDGIDIEIGESRIISNRILKATDLDSADSNLTYTVRYAPEKGLLQRLSKFDGSVVENITLGMNFTQWEVDNQRIRYVHTDGDGGRDLIKFDITDGTNPLIDRYFYVTVDHIDNVHPSIINAGVTMQEGSRVTLTTSIISTSDLNSPDEDLLFTITTAPTKGHLESTDNPGMPINSFTQLDLAGSKIYYVHTADDEVKMDSFQFQVTDGFNTVVRTFRISFTDVDNKEPVVRYDTIRLQEGDNKLITPFELGIDDRDTPANELRFTITQLPIHGNILRNNTALVTEFTMHDINENLISYQHDGSEQTADSFSFIVTDGTHNEFYVLPDITTLTRQPQQVPIEIVPVDNGAPQIVVNRGAPTLDLLGTGELGFMITNKYLMSEDRDSVDNSLLYVITTQPQHGYIMNIALGNISITNFTQSDVNNMYIQYIVYPNVDATSDTFFVEVRDAGGNTLPNQPFRLNWSWISLEKEYYEVNETERYLNIKLVRRGYLGETSFVGIQTADGTAIADEDFRGKSARQVQFNPGQTEGFWRVRILNDRLYEQAEVFEIILHDPVMGALEYPDRAVVTIFDAEDESGVFIDLPDNYVIEEDIGEFLVPIRRTGDLSQELMASCSTMPGSATGSDPSPVLSFSDYISRMEEDPDNMVAFDKGEDLAYCRILIIDDSLYEEDETFQVKLSNPMGGRIGNPSAINVIIAGDTDDVPSFYFGEPEYKVDENAPFVEVTVFRTGTDVSKMASVTVRSRASNPVSAVAGEDYAGISRNLDFAPGVNQQTVKVYIIDDRGQPRLEGPETFELVLNMPMNGVLGAPSKTVITINDTISDLPKVEFRHPTYEVNENDIRITAEVVRSGDLSIESSVRCYTRQGSAQVMMDYDERPNTEASIITFLPGERSKTCTVLLMDDNVFEPDEAFRLVLGSPRTASGVPAVVGEQNVTVVTVHDVGDAPIIKFPETKFSIDEPTDLDSVVTVSIPVIRMGDNTQTSIVRVFTKDGSARSGIDYNPLSQVLEFGFNVTERVVEIEILPDEDRNEMREAFTLHITNDQMMIADVQMNHAIIYIEQEGQASGVTFPSQPVVVSLLDYDDIPNARTNPPRGYPLICVSPCNPKYPDFATTGPICDSEGLNDTVTQFRWMVSAPTSESGVTSPLRQTDSDTFFSSTKSITLDSVYFGPGSRVQCVARAVGSEGDAGREHPSNSIVISTTDGMCMPRVANAIGAEPFTARMRYTGPADPDYPNKVRLTVTMPHVDGMLPVISTRQLSNFELALSKDGYRVGTHRCSNLLDYNEIPTDFGFITEETKNPNVVGDTYAYQYSPELRGEETLRFYRNLNLEACLWEFNAYYDMSELLDECGGLVGTDGQVLDLVQSYVSMRIPLFVSFVFHSPVATGGWKHFDQQSTLQLTFVYDTSILWQNGIGSQVTTGTQSLQGNLYPTSMRIDEDGRLVVNFRTEALFNGLFVQSHQSTDVVSTVNSIDHPGITYSLSLLRTEPTYAQPEQLWQFVSDLSVSDYSGTYTIQLVPCTTLPNTVYSQPPVCNPEDIITFELPIRFQQVSDPVPEEYSLNTEFVLVGKESIYLSDGSMGFGEGSDVAYNPGDTIFGRIHVDPVQNLGAGFNLDIQKVFLCTGRDGYIPKYNPAANEYGCVADTPNLLYAFKILDRGAPDTIVREFNGLPFNATLAIDNAADLELVQQPGADGFRLASDALFEVDYGRTWYLHSIYSMRSSESSGIGKRETEHHAISSRQRRQANSEALVDPAQGQGTNMKRVALQGPQDVDNNLGGTYELAPKGTNVVMIAVVIGVILIILLVALVIGVVVRRRQAKQQPVVVVNGSAKVVSNVHFDDNTEV", - "output": "plasma membrane ; calcium ion binding ; cell communication ; homophilic cell adhesion via plasma membrane adhesion molecules" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPPDIDRLTAVLARVRDGVRFCAVCGNVSDDERCRICSDPRRDASVVCVVEEPKDVQAVERTREFRGRYHVLGGALDPLSGVGPDQLRIRELLSRIGERVDDVDITEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPMGGDLEFADELTLGRALAGRRAMV", - "output": "catalytic activity, acting on a nucleic acid ; DNA binding ; metal ion binding ; DNA recombination ; DNA repair" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MMVSLFSQFDSPWLLNIPLVLLALIMPWKLFVSFGPSWAGTRSSRLVYVTMETLMSQVMQPLNKLGFRWVVLFSSLMLMLMTLNVIGLFPYTFTPTTQLSMNLGLAVPLWFGTVVYGFRNHPVIALAHLCPEGAPNLLVPVLVVVETLSILMRPLALGLRLTANLTAGHLLMHLISSAVLGLMELSVMLSGITLLLLVFLTMLEIAVALIQGYVFAILVTLYLDENL", - "output": "mitochondrial inner membrane ; proton-transporting ATP synthase complex, coupling factor F(o) ; proton transmembrane transporter activity ; proton motive force-driven ATP synthesis" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MRRAIVRGTGHYLPERVVENSWFEDKLDTSDEWIRARTGIERRHFAAEDQRTSDLGILAAQAALADAGLEAAQIDAVIVATSTPDLTFPSVATMVQAGLGMRHGFAYDLQAVCAGFVYALANADALIRAGLADRVLLIGAETFSRIMDWTDRGTCVLFGDGAGAVVLEAAEGQGSSADRGILATDLNSDGQYRDLLYVDGGVASTGTAGHLRMQGNLVFRHAVEKLADTAHRALDRAGLTPDQVDWLVPHQANLRIIEATAKRMHLPMEKVVLTVADHGNTSAASIPLALSVANAEGRFKPGDLLVAEAIGGGLAWGSVVLRW", - "output": "cytoplasm ; 3-oxoacyl- synthase activity ; beta-ketoacyl-acyl-carrier-protein synthase III activity ; fatty acid biosynthetic process" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MSQAPEARPSPPSVYHERQRLELCAVHALNNVLQEQLFSQEAADEICKRLAPDSRLNPHRSLLGTGNYDVNVIMAALQGLGLAAVWWDRRRPLSQLALPQVLGLILNLPSPVSLGLLSLPLRRRHWVALRQVDGIYYNLDSKLRAPEALGDEDGVRTFLAAALAQGLCEVLLVVTKEVEEAGCWLNTS", - "output": "cytosol ; cysteine-type deubiquitinase activity ; protein deubiquitination" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "SGSKTAKIGDGCFGVRLDRIGSTSGMGCGGVPKPTPGGS", - "output": "extracellular region ; hormone activity ; toxin activity ; regulation of blood pressure ; vasodilation" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MSAFCLGLVGRASAPAEPDSACCMELPAAAGDAVRSPAAAAALIFPGGSGELELALEEELALLAAGERPSDPGEHPQAEPGSLAEGAGPQPPPSQDPELLSVIRQKEKDLVLAARLGKALLERNQDMSRQYEQMHKELTDKLEHLEQEKHELRRRFENREGEWEGRVSELESDVKQLQDELERQQIHLREADREKSRAVQELSEQNQRLLDQLSRASEVERQLSMQVHALREDFREKNSSTNQHIIRLESLQAEIKMLSDRKRELEHRLSATLEENDLLQGTVEELQDRVLILERQGHDKDLQLHQSQLELQEVRLSCRQLQVKVEELTEERSLQSSAATSTSLLSEIEQSMEAEELEQEREQLRLQLWEAYCQVRYLCSHLRGNDSADSAVSTDSSMDESSETSSAKDVPAGSLRTALNELKRLIQSIVDGMEPTVTLLSVEMTALKEERDRLRVTSEDKEPKEQLQKAIRDRDEAIAKKNAVELELAKCRMDMMSLNSQLLDAIQQKLNLSQQLEAWQDDMHRVIDRQLMDTHLKERSQPAAALCRGHSAGRGDEPSIAEGKRLFSFFRKI", - "output": "centrosome ; cytoplasm ; dynactin binding ; small GTPase binding ; Golgi to secretory granule transport ; neuron projection development ; vesicle transport along microtubule" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MRTEDDSWDVTTSVGSTGLLVAAARALETQKADPLAIDPYAEVFCRAAGGEWADVLDGKLPDHYLTTGDFGEHFVNFQGARTRYFDEYFSRATAAGMKQVVILAAGLDSRAFRLQWPIGTTIFELDRPQVLDFKNAVLADYHIRPRAQRRSVAVDLRDEWQIALCNNGFDANRPSAWIAEGLLVYLSAEAQQRLFIGIDTLASPGSHVAVEEATPLDPCEFAAKLERERAANAQGDPRRFFQMVYNERWARATEWFDERGWRATATPLAEYLRRVGRAVPEADTEAAPMVTAITFVSAVRTGLVADPARTSPSSTSIGFKRFEAD", - "output": "methyltransferase activity ; methylation" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MDIGGPTNIRHVAHVTFDRFDGFLGLPSEFEPDVPRKAPSASATVFGVSTESMQLSYDSRGNCVPVILLLLQSRLYDQGGLQAEGVFRITGENSEEEFVREQLNKGIIPDGIDVHCLAGLIKAWFRELPRGVLDPLPSEQVMQCESDEDFVKVVRLLPQTEASLLNWAINLMADVIQFEHVNKMNSRNLALVFAPNMSQMADPLTALMYAVQVMKLLKSLTEKTVREREASSSVVDRRCSKEAEDGEKEKDNEEEEEDEEEEEEEEDEDEDEEEEGDGVYIIKEEEASEIIKVVADEHKSGSIKSEFEGSSATDSKGDNGVVQPPICSSNP", - "output": "plasma membrane ; GTPase activator activity ; signal transduction" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "MRNLLENIKKNSQKLLNLTPKDKEKIILKLAQILRENFKIILEANKKDMANFTKSGAMKDRLLLDEKRILALCEGLEKIAYIEDPIGKISKGWKNYAGLSIQKMSIPLGLICVIYEARPSLSAEIAALMIKSSNACVFKGGSEAKFTNEAIFTLVNKVLKEFDLQDCFAMFTQRDEILQILAFDDLIDVIIPRGSSNMIQEIANNTKIPLIKQNKGLCHAFVDQSANLDMALKIILNAKCQRVSVCNALETLLIHEKIAKNFISLLIPEFKKFKVKIHAHENALAYFNNSNLKIFKANENTFDTEWLDFALSVKLVKDCDEAIEHINKHSSLHSETIISNDASNIAKFQRLINSSCIYANASTRFSDGGEFGFGGEVGISTSKLHARGPMGIEDICTYKYIINGEGQIRE", - "output": "cytoplasm ; glutamate-5-semialdehyde dehydrogenase activity ; NADP binding ; L-proline biosynthetic process" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MAQSSPPQSLQGLVPLGLLPGLGLGSAIGLHVSGLVLRFVRFLPFYATRRPSQPAGPARSTRTTQATAPRRTRPAPAGGQRQSASEREKLRMRTLARALQELRRFLPPSVAPAGQSLTKIETLRLAIRYIGHLSALLGLSEDSLRRRRRRSADAAFSHRCPQCPDGGSPSQAQMLGPSLGSAMSSGVSWGCPPACPGPLISPENLGNRISNVDPRVTPPYCPQIQSPLHQSLERAADSSPWAPPQACPGMQMSPEPRNKTGHWTQSTEPAELTKVYQSLSVSPEPRLSLGSPLLLPRPSCQRLQPQPQPQPQWGCWGHDAEVLSTSEDQGSSPALQLPVASPTPSSGLQLSGCPELWQEDLEGPPLNIFY", - "output": "nucleoplasm ; nucleus ; DNA-binding transcription activator activity, RNA polymerase II-specific ; DNA-binding transcription factor activity ; DNA-binding transcription factor activity, RNA polymerase II-specific ; protein dimerization activity ; RNA polymerase II cis-regulatory region sequence-specific DNA binding ; sequence-specific double-stranded DNA binding ; heart morphogenesis ; mesoderm formation ; mesodermal cell migration ; Notch signaling pathway ; positive regulation of transcription by RNA polymerase II ; regulation of transcription by RNA polymerase II ; signal transduction involved in regulation of gene expression ; somite rostral/caudal axis specification ; somitogenesis" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MTRSSVLADALNAINNAEKTGKRQVLLRPSSKVIIKFLQVMQKHGYIGEFEYIDDHRSGKIVVQLNGRLNKCGVISPRFNVKIGDIEKWTANLLPARQFGYVILTTSAGIMDHEEARRKHVSGKILGFVY", - "output": "cytosol ; cytosolic small ribosomal subunit ; structural constituent of ribosome ; cytoplasmic translation" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MSSTPSNQNIIPLIKKESIVSLFEKGTRQDGRKLTDYRPLSITLDYAKKADGSALVKLGTTMVLAGTKLEIDKPYEDTPNQGNLIVNVELLPLAYETFEPGPPDENAIELARVVDRSLRDSKALDLTKLVIEPGKSVWTVWLDVYVLDYGGNVLDACTLASVAALHNTKVYKVEQDSNGFRVNKNEVVGKLPLNHPVVTVSIAKVDKYLIVDPDLDEESIMDTKVSFSYTPDLKIVGIQKSGKGSMSLQDIDQAENTARLVAVKLLEELKKQLGI", - "output": "cytoplasm ; exosome (RNase complex) ; RNA catabolic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MKTLLLTLVVVTIVCLDLGYTLKCNKLIPIASKTCPAGKNLCYKMFMMSDLTIPVKRGCIDVCPKNSLLVKYVCCNTDRCN", - "output": "extracellular region ; membrane ; other organism cell membrane ; toxin activity ; killing of cells of another organism" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MSYYGNGGYNPYGAYGNVPPPVYGTPGLAPPTVHVHTDGGHHHGHHHHHHSFLHELGHALTGHHHHHHGHHFGHHHHHHHGHH", - "output": "stress response to copper ion" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MIKLKVKKGDEVVVITGKHKGKKGKILKVFPEDSKVIVFGVNLVKKHTKSNQMSEGGIITKELPIHISNIAHIDPKTGNPTKVAFKFLEDGSKVRVAKKSGEIIGKEGK", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MVVSADCRISLSAPSCIRSSSTGLTRHIKLGSFCNGELMGKKLNLSQLPNIRLRSSTNFSQKRILMSLNSVAGESKVQELETEKRDPRTVASIILGGGAGTRLFPLTKRRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNSNGLGFGDGYVEVLAATQTPGESGKRWFQGTADAVRQFHWLFEDARSKDIEDVLILSGDHLYRMDYMDFIQDHRQSGADISISCIPIDDRRASDFGLMKIDDKGRVISFSEKPKGDDLKAMAVDTTILGLSKEEAEKKPYIASMGVYVFKKEILLNLLRWRFPTANDFGSEIIPFSAKEFYVNAYLFNDYWEDIGTIRSFFEANLALTEHPGAFSFYDAAKPIYTSRRNLPPSKIDNSKLIDSIISHGSFLTNCLIEHSIVGIRSRVGSNVQLKDTVMLGADYYETEAEVAALLAEGNVPIGIGENTKIQECIIDKNARVGKNVIIANSEGIQEADRSSDGFYIRSGITVILKNSVIKDGVVI", - "output": "chloroplast ; chloroplast envelope ; chloroplast stroma ; ATP binding ; glucose-1-phosphate adenylyltransferase activity ; glycogen biosynthetic process ; starch biosynthetic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MKKLFGLLGHPVGHSLSPLMHNQMFQLLDFDGYYHAFDVEPSQLEKAVEGARALQMQGFNVTIPHKVTIMDYLDMVDEEAQEIGAVNTVVMKDGQLFGSNTDGQGYLESLMDVVTTPFPTQDVLIIGAGGAARAIGTVLKREKVRSITIANRTLAKAEEFSGVLESSETSCSALSLKEAEQQLERFSVIINTTSVGMSPRVDDMPLSLERLSRETVVSDLIYNPLETKFLREAKQKGAKTVDGLGMFVNQGALAFELWTGLRPDREKMRRCVLEQLGG", - "output": "NADP binding ; shikimate 3-dehydrogenase (NADP+) activity ; amino acid biosynthetic process ; aromatic amino acid family biosynthetic process ; chorismate biosynthetic process ; shikimate metabolic process" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MKTLYSLRRFYHVETLFNGTLALAGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGVGAFLLVFKALYFGGVYDTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICIFGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVCGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLSTSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN", - "output": "chloroplast thylakoid membrane ; photosystem II ; chlorophyll binding ; electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity ; metal ion binding ; photosynthetic electron transport in photosystem II" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MADSMETHKFKVIIVGGSIAGLTLAHSLSKANIDHIVIEKRAEIAPQEGAFIGVWPNGAQILDQLGLYQSLEELTAPISRMHLSFPDDYSFSSFLPKTIHERFKYPIVSLDRQKVLEILFQNYPDKSNIITNQRVSEVRLLGDSASVVTEDGSVFRGDLIVGADGVHSPLTVEYACVFGISRPIPGLRSGEHINHYGDKFCVITFHGKDGRVFWFIIQKLDRVYTYPNAPRYSPNDAADLCGKMQNVVIWQDITVGDLWKTKVVASMTALEEGIFETWSLNRIVILGDSVHKMTPNIGQGANTAIEDVAVLASLINRMIHADDLNKPSESCIETMLQEYKSLRYEPAKSTYQRSRFGARFHTRDSWLKAVVGRYVFQYVGGLIENRTIKTLAGGDTIDFLPRPDRLETGRVAQFQKSEESPQRQWTLLWVSSLALFLFFPWLGSYLHSTIS", - "output": "membrane ; FAD binding ; monooxygenase activity ; terpenoid biosynthetic process" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MARIAGVNIPDNKHAVISLTYIFGIGRHTAKNILAAVGITETTKIRELDDAQLDAIRAEVAKVPTEGDLRREISMNIKRLMDLGCYRGLRHRRSLPVRGQRTKTNARTRKGPRKPIKK", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; tRNA binding ; translation" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MTNIFNAMRVTATVGGKEIVFETGRLANQADGAVWIQCGGTVVLVTACSQATDRDLGFFPLTVEYSEKMYAAGRIPGSFFRREIGRPSERETLVSRLIDRPIRPLFPKGLKDEVQVLANVISSDQNNDSDVLAVTGASTALGLSSIPFDGPVAGARIGRIDGQFVINPTIKEMERSDLNIVLAASRDAVVMVEGEASFVPEAVIVEALEWGHKEIQPLIDAQLKLREMAGKAKREFTAPVEDADLAARVAALATADLDVALRIPEKMARKDARKAVKEKVMEALVADPAYAEDTTPLRAVGDILSALEKRIVRERIVREGRRIDGRDTTTVRPILIEAGILPRAHGSALFARGETKSLVVATLGSSTDEQRMDSLTGDVTKRFMLHYNFAPYCVGEVKPVRVSRREIGHGALAEKALRPILPLGEDFPFTLRVVAETMESNGSSSMAAVCGGCLSLMDAGVPITAPVAGVAMGLIKEGDQYVVLTDILGDEDALGDMDFKIAGTSEGITAVQMDIKVKGLPTDVMARAMQQARDARLHILGEMGKVLEAPRAELSAYAPQHAEVFVNPDIIRIIIGPGGKNIKAITATTGASIDIEDSGRVSIFAPTLEAMEMAREMVQYYDQRADIGKNYTGKVRKVLEIGAIVEILPNLEALVHISQLDTNRVEQASDVARLGEDMVVKVIEINGDRIRASRKAVLLEEQGIEWKPEDTARPSGPREGGRRDGGRDGRRDGGRDGRRDGGRDGGRRDGGRRDGGRDRN", - "output": "cytoplasm ; magnesium ion binding ; polyribonucleotide nucleotidyltransferase activity ; RNA binding ; mRNA catabolic process ; RNA processing" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MDTQIAITGVAVGKEINNDNSKTDQKVSLPKADVPCIDKATQTIIEGCSKDDPRLSYPTKLETTEKGKTKRNSFACVCCHSLKQKCEPSDVNDIYRKPCRRCLKHKKLCKFDLSKRTRKRKPRSRSPTPFESPMVNVSTKSKGPTDSEESSLKDGTSYLASFPSDPNAKQFPNSRTVLPGLQQSLSDLWSTLSQPPSYGAREAETTSTGEITTNNHTKSNGSVPTNPAVLASNDEHTNISDAPVIYSTYNSPVPISSAPTSINSEALFKHRPKIVGDEETQNVKVKRQKKSYSRHMTRSFRKQLQSLIISQKGKIRDISMKLDTWSKQWNDLVEKSMFLPTIADPVSVGIISHEEATLRLHLYKTEISYLSKLPFIKVEENVSVDELRKKKPILFSVIMSCVSIVLTPKQTTRGTIMKLDSFVLNLITNQIFKANNKSIEIIESLSTLCLWYNFFEWSSKTRYHIFNYICCCLTRDLGPTYVNRSFGMFSDEDPKRFKSPLELYSNGASLTLLVYISALNISIFLRQSIQARWSHVTEKACEDLVKETKKSRHYDNDKLLLDSADDPILVQFAKMNHVLENIHTHLHERDLNDDEFDDPIFTKKYLNKLMEKYHKQLQEIFTKLDRNRPRVIAFYYSVEAYLYQYKLAVFIGEMSHTINEKVELPREIMDDFVKCYHCCKSALEEFSKLEPILITSLPLFHTSRIIYTVGMLLLKLRYSVVAIPSFHDLMPLTDDAIALVIGVNNLLEKTSELYPFNNSLYKFRYVIALFCQTYANKVIDVADRYNAEREKLKEKQVIDEVSNGHDGTKPINAYVTESQKMPTEEDPIIDNNTNQNITAVPDEMLPVYSRVRDDTAAMNLNINSTSYMNESPHEHRESMTGTTLLPPPFISNDVTNSADSTNIKPSPSSSVDNLNDYLTDINSLAWGVNSLNDEFWTDLFMNDI", - "output": "mitochondrion ; nucleus ; DNA-binding transcription factor activity ; DNA-binding transcription factor activity, RNA polymerase II-specific ; sequence-specific DNA binding ; zinc ion binding ; positive regulation of transcription by RNA polymerase II" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MTTNDTWFTEHFQTTGSAIGFRVTGKLDEVQSPFQKIEIYNSTDWGKLMVIDGALMLTSRDNFLYHEMISHPALFTHTAPKCVVIIGGGDCGTLREVLKHPDIEQVTQCDIDEQVTRMAEKHFPELCTSNNDPRATLLFSDGVAYMADCPTNSVDVIIVDSTDPVGPAKGLFNRTFYESCFRALKNDGLLIQQSESPLALLELIKEMRHEMSKAGFKAFKTLPFPQPCYPTGWWSVTLSSKQPNANFAFRQTDAQTKPFDTLYYNAHLHHGVLVPPPFIAHALGE", - "output": "cytoplasm ; spermidine synthase activity ; spermidine biosynthetic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MRPEGSLTYRVPERLRQGFCGVGRAAQALVCASAKEGTAFRMEAVQEGAAGVESEQAALGEEAVLLLDDIMAEVEVVAEEEGLVERREEAQRAQQAVPGPGPMTPESALEELLAVQVELEPVNAQARKAFSRQREKMERRRKPHLDRRGAVIQSVPGFWANVIANHPQMSALITDEDEDMLSYMVSLEVEEEKHPVHLCKIMLFFRSNPYFQNKVITKEYLVNITEYRASHSTPIEWYPDYEVEAYRRRHHNSSLNFFNWFSDHNFAGSNKIAEILCKDLWRNPLQYYKRMKPPEEGTETSGDSQLLS", - "output": "chromatin ; cytoplasm ; nucleus ; chromatin binding ; histone binding ; cell differentiation ; gonadal mesoderm development ; nucleosome assembly ; spermatogenesis" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MEVVTFGDVAVHFSREEWQCLDPGQRALYREVMLENHSSVAGLAGFLVFKPELISRLEQGEEPWVLDLQGAEGTEAPRTSKTDSTIRTENEQACEDMDILKSESYGTVVRISPQDFPQNPGFGDVSDSEVWLDSHLGSPGLKVTGFTFQNNCLNEETVVPKTFTKDAPQGCKELGSSGLDCQPLESQGESAEGMSQRCEECGKGIRATSDIALHWEINTQKISRCQECQKKLSDCLQGKHTNNCHGEKPYECAECGKVFRLCSQLNQHQRIHTGEKPFKCTECGKAFRLSSKLIQHQRIHTGEKPYRCEECGKAFGQSSSLIHHQRIHTGERPYGCRECGKAFSQQSQLVRHQRTHTGERPYPCKECGKAFSQSSTLAQHQRMHTGEKAQILKASDSPSLVAHQRIHAVEKPFKCDECGKAFRWISRLSQHQLIHTGEKPYKCNKCTKAFGCSSRLIRHQRTHTGEKPFKCDECGKGFVQGSHLIQHQRIHTGEKPYVCNDCGKAFSQSSSLIYHQRIHKGEKPYECLQCGKAFSMSTQLTIHQRVHTGERPYKCNECGKAFSQNSTLFQHQIIHAGVKPYECSECGKAFSRSSYLIEHQRIHTRAQWFYEYGNALEGSTFVSRKKVNTIKKLHQCEDCEKIFRWRSHLIIHQRIHTGEKPYKCNDCGKAFNRSSRLTQHQKIHMG", - "output": "nucleus ; DNA binding ; metal ion binding ; RNA polymerase II cis-regulatory region sequence-specific DNA binding ; regulation of DNA-templated transcription" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MAMTYHLDVVSAEQQMFSGLVEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGHEEFIYLSGGILEVQPGNVTVLADTAIRGQDLDEARAMEAKRKAEEHISSSHGDVDYAQASAELAKAIAQLRVIELTKKAM", - "output": "plasma membrane ; proton-transporting ATP synthase complex, catalytic core F(1) ; ATP binding ; proton-transporting ATP synthase activity, rotational mechanism" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MWKEFKEFAFKGNIIDLAVAVVIGGAFGAIVTSFVENIITPLMGVIVGGVDFTTLKVTVGEAEILYGNFIQSFVDFIIIAFSIFLAIKFLVKFKRQKEEEEVEAVVEELSKQEELLTEIRDLLKEQSNKN", - "output": "plasma membrane ; mechanosensitive monoatomic ion channel activity" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MVKALLVGSKVLIPNVDESRYIYSNGFYGKAIGISKPKDPKDIIRPLELSLIESVYLAKKGLIKVIDKNGEVLEYEKLYEYSSKIINKFDIMYRVYEDLREKGFIVRSGVKYGADFAVYTLGPGLEHAPYVVIAVDIDEEITPHELLSFGRVSHSTRKRLVLALVDRKSESVRYIMFKWVKM", - "output": "lyase activity ; nucleic acid binding ; tRNA-intron endonuclease activity ; tRNA splicing, via endonucleolytic cleavage and ligation" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MLQYPHINPVALQLGPIKIHWYGLMYLLGIFAGWYLTRYRAKVKPWAPIKPEQVGDLTFYVALGVILGGRIGYIIFYNLPYYFHNPSQMFFLWDGGMSFHGGFIGVLIAFALFARKIGANFFDLGEFVAPVIPIGLGAGRIGNFINGELLGKVTDSPLGMVFPTGGPLPRYPSQLFEFFFEGVVLFSVLWLVTIKKRPRYLVLGLFMFLYGYARFICEFFRQPDPQYGYIFFNWMTMGQILSIPMILLGAVILIAVFIKTRKNKCENI", - "output": "plasma membrane ; phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity ; lipoprotein biosynthetic process" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MNKVVLLCRPGFEKECAAEITDKAGKREIFGFARVKENAGYVIYECYQPEDGEKLISELPFSSLIFARQWFVVGELLQHLPPEDRITPVVGMLQGVVEKGGELRVEVADTNESKELMKFCRKFTVPLRAALRDAGVLTNYETPKRPVVHVFFIAPGCCYTGYSFAHNNSPFYMGIPRLKFPSDAPSRSTLKLEEALHVFIPEDEWDERLANGMYAVDLGACPGGWTYQLVKRNMWVYSVDNGPMAQSLMDTGQVTWLREDGFRYRPNRNNISWMVCDMVEKPAKVTALMAQWLVNGWCRETIFNLKLPMKKRYEEVSHNLAYLQAQLDEHGVNAQIQARQLYHDREEVTVHVRRLWAAVGGRRDER", - "output": "cytoplasm ; S-adenosylmethionine-dependent methyltransferase activity ; methylation ; rRNA processing" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MRNFPVPYSNELIYSTIARAGVYQGIVSPKQLLDEVYGNRKVVATLGLPSHLGVIARHLHQTGRYAVQQLIYEHTLFPLYAPFVGKERRDEAIRLMEYQAQGAVHLMLGVAASRVKSDNRFRYCPDCVALQLNRYGEAFWQRDWYLPALPYCPKHGALVFFDRAVDDHRHQFWALGHTELLSDYPKDSLSQLTALAAYIAPLLDAPRAQELSPSLEQWTLFYQRLAQDLGLTKSKHIRHDLVAERVRQTFSDEALEKLDLKLAENKDTCWLKSIFRKHRKAFSYLQHSIVWQALLPKLTVIEALQQASALTEHSITTRPVSQSVQPNSEDLSVKHKDWQQLVHKYQGIKAARQSLEGGVLYAWLYRHDRDWLVHWNQQHQQERLAPAPRVDWNQRDRIAVRQLLRIIKRLDSSLDHPRATSSWLLKQTPNGTSLAKNLQKLPLVALCLKRYSESVEDYQIRRISQAFIKLKQEDVELRRWRLLRSATLSKERITEEAQRFLEMVYGEE", - "output": "DNA binding ; DNA recombination ; transposition" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MATSKGRNADPAAALRDCRAAFIGVGVASALVNLLYLTGSFFMLEVYDRILPSRSIPSLIALSLLALLLYAFQGAFELIRGRMLVRIAGALDESLNGRIYRAIVKAPLKLRMQGDGLQALRDFDQVRSFLSGVGPAALFDLPWLPFYIAICFLFHPVIGLIAIIGGLILTLLTYLTNRGTQAPAKKASEAGGLRNVFAQASQRNAEVVHAMGMSARLTALWERRNTEFRDENRRTSDIGNGYGALSKVFRMALQSGVLAAGAVLVIRGEASPGIIIAGSILTARALAPVELAIGNWRGLVAARQSWQRLKELLNALPEADAPLQLPDPHERLTVEGLASGPPAAQRLVVSDVNFTVRAGGAVGVIGPSASGKSSLARAILGIWPAYRGSVRLDGAALDQWDSDALGKHVGYLPQDVELFAGTIAQNICRFAEDATSEAIVAAAKAARVNDLILRLPNGYDTEIGDGGMTLSAGQRQRVALARALYGDPFLVVLDEPNSNLDAEGEQALSEAIMSVRSRGGIVIVVAHRPSALASVDLVLMMNEGRMQAFGPKEQVLGQVLRPQQVERQNALKVVAEGQEAKQ", - "output": "plasma membrane ; type I protein secretion system complex ; ABC-type transporter activity ; ATP binding ; ATP hydrolysis activity ; protein secretion by the type I secretion system" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MGQPAPYAEGPIQGGDAGELCKCDFLVSISIPQTRSDIPAGARRSSMGPRSLDTCWGRGPERHVHRLECNGVIFTHRNLCLPGGKTKTENEEKTAQLNISKESESHRLIVEGLLMDVPQHPDFKDRLEKSQLHDTGNKTKIGDCTDLTVQDHESSTTEREEIARKLEESSVSTHLITKQGFAKEQVFYKCGECGSYYNPHSDFHLHQRVHTNEKPYTCKECGKTFRYNSKLSRHQKIHTGEKPYSCEECGQAFSQNSHLLQHQKLHGGQRPYECTDCGKTFSYNSKLIRHQRIHTGEKPFKCKECGKAFSCSYDCIIHERIHNGEKPYECKECGKSLSSNSVLIQHQRIHTGEKPYECKECGKAFHRSSVFLQHQRFHTGEQLYKCNECWKTFSCSSRFIVHQRIHNGEKPYECQECGKTFSQKITLVQHQRVHTGEKPYECKECGKAFRWNASFIQHQKWHTRKKLINGTGLSAVKPYCPCAILSPLPPQHTCSALAPPGPPLSSSHAVVLPPSVPFFLLLPSSEKANPSPVQIAHFFQDLAFPGKSSLQSPNPLSHSL", - "output": "nucleus ; DNA binding ; DNA-binding transcription repressor activity, RNA polymerase II-specific ; metal ion binding ; negative regulation of transcription by RNA polymerase II" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MAKDIKFSEDARRSLLNGVNKLANTVKTTLGPKGRNVVLEQSYGAPTITNDGVTIAKAIELEDHYENIGAKLVAEAASKTNDIAGDGTTTATVLTQAIVQEGMKNVVAGANPVGIRRGIEKATKAAVDQLHKNSHKVSSRDQIAQVASISSASKEIGDLIAEAMEKVGKDGVITIEDSRGIETELSVVEGMQFDRGYLSQYMVTDNDKMEADLENPYILITDKKISNIQDILPMLQEIVQQGRSLLIIADDVTGEALPTLVLNKIRGTFNVVAVKAPGFGDRRKEQLADIAALTGGTVISEDLGLELKDTQLSQLGQARRVTITKDSTTIVDGSGAKEAIQERVDTIRKQIEDTSSDFDKKKLQERLAKLTGGVAVIHVGAATETELKERRYRVEDALNATRAAVDEGYVAGGGTALVNVEEAVKATKGDTDDEQTGINIVARALTAPVRQIAENAGQEGSVVVDHLRKVDPEVGYNAAEDKYVNMIDEGIIDPTQVTRSALQNAASIAGLLLTTEAVVAEIPEDKPEAAPAQPGMM", - "output": "cytoplasm ; ATP binding ; ATP-dependent protein folding chaperone ; isomerase activity ; unfolded protein binding ; protein refolding" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MAFLEDANHTAVTEFILLGLTDDPVLKVVLFSIILCIYLVTVSGNLSTILLIRVSSQLHHPMYFFLSHLASVDVGYSSTVTPKMLANFLVERSTISYLGCTIQLFSGAFFGTLECFLLATMAYDRFIAICNPLLYSTKMSTQVCIQLLVGSYIGGFLNASSFLLSFFPLLFCGPNRVNHFFCDLAPLIELSCSGSNVPIVPASFCSAFVIIVTVFVIAISYTYILITILKMRSTEGRQKAFSTCTSHLTAVTLFYGTITFIYVMPKSSFSTDQNKVVSVFYMVVIPMLNPLIYSLRNNEIKGALKRQLARKIFS", - "output": "membrane ; plasma membrane ; G protein-coupled receptor activity ; odorant binding ; olfactory receptor activity ; G protein-coupled receptor signaling pathway ; sensory perception of smell" - }, - { - "instruction": "Predict the specific Gene Ontology term that best represents the properties of a given protein sequence.", - "input": "ADANKVWPTGLTVAEAEELHTYVTNGFRVFVGIAVVAHVLVFAAHPWGRGGALVA", - "output": "plasma membrane ; plasma membrane light-harvesting complex ; bacteriochlorophyll binding ; electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity ; metal ion binding ; photosynthesis, light reaction" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MIRSARLISNIKFGQKNIRQFSTNTNWWANVQKGPEDPILGVSIAYNKDTSPSKINLGVGAYRDENGKPYVLDCVKKADKKIYEANVDHEYAPIVGVAAFNQLAAQLALGEECKHIKEKRIATVQSISGTGALRIAADFFARFLKGKTAYVPNPTWGNHNVIFNDAGIPVKSYGYYNPATCGLNFEAMTKDIAAAPEGSIILLHACAHNPTGVDPTAEQWKKISEICKERGHFVLFDFAYQGFASGSPEKDAAAVRMFVEDGHNIALCQSFAKNFGLYGERIGAFSILTETSDQALNVESQLKILIRPMYSNPPVYGARLVQAILKDKELTNEWRSEVKGMADRIINMREQLVKYLKKHGSTRDWSHITTQIGMFCFTGLTPEQVDRLANEYHIYLTRNGRISIAGINSTNVEYLAKAMAAVTKDN", - "output": "mitochondrial matrix ; mitochondrion ; plasma membrane ; kynurenine-oxoglutarate transaminase activity ; L-aspartate:2-oxoglutarate aminotransferase activity ; pyridoxal phosphate binding ; 2-oxoglutarate metabolic process ; aspartate biosynthetic process ; aspartate catabolic process ; aspartate metabolic process ; glutamate metabolic process" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MSESQPPRRGRFPLPLSATTPVVRRFVSTGQAVLQPVPPRPQRPASEITRETARPAILAGHGLDSDGFRARMIERLRADGCRDEHVLRAMSRVPRHLFVDSALAAQAYEDTSLPIGHGQTISKPSVVARMLGLLRQRPGGAQLGRVLEIGTGCGYQAAVLCRLASQVYSIERLKALHDRARENLAPMRRDQLRLIYGDGLHGHGPNAPFDAIIAAAGGHAIPQAWLDQLAVCGRLVAPMHDAQRGTQVLVVVDRMPDGSLVQHRHETVRFVPLESGTSDYKPA", - "output": "cytoplasm ; protein-L-isoaspartate (D-aspartate) O-methyltransferase activity ; methylation ; protein modification process ; protein repair" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MTREREPGKSRTKSGSGTTDQVFCSFCGRSAQEVNSMIAGPKAFICDRCIKTSFDILRKEVNAVPPVAKVPEQPFQPRLVSPKAIMDSLGQYVVGQDAAKKSLAVAVYNHYKRIDSQEQQQADDEVVIEKSNILLIGPTGTGKTLLAQTLANLLEVPFSIVDATSLTEAGYVGDDVETILARLLHAADFNLERTERGIIYVDEIDKIARKSANVSITRDVSGEGVQQALLKILEGAVVGVPPKGGRKHPEQQLININTKNILFICGGAFEGLDKLIAKRVSKSSMGFGAKVKTTQIGYDPEILKLVMQDDLHEYGLIPEFIGRLPVISTLEMLDEKALRNILVEPKNAITKQYKKLFEMDGVELEFTEEALDKVVKIAIERGTGARALRSVLENVMIDIMFEIPSMKNTHKCVITADTIENKAAPEYFSGDRKKKKIA", - "output": "ATP binding ; ATP hydrolysis activity ; ATP-dependent protein folding chaperone ; protein dimerization activity ; unfolded protein binding ; zinc ion binding" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MPRTTPAPGHPARGARTALRTTRRRAATLVVGATVVLPAQAATTLKEAADGAGRDFGFALDPNRLSEAQYKAIADSEFNLVVAENAMKWDATEPSQNSFSFGAGDRVASYAADTGKELYGHTLVWHSQLPDWAKNLNGSAFESAMVNHVTKVADHFEGKVASWDVVNEAFADGDGPPQDSAFQQKLGNGYIETAFRAARAADPTAKLCINDYNVEGINAKSNSLYDLVKDFKARGVPLDCVGFQSHLIVGQVPGDFRQNLQRFADLGVDVRITELDIRMRTPSDATKLATQAADYKKVVQACMQVTRCQGVTVWGITDKYSWVPDVFPGEGAALVWDASYAKKPAYAAVMEAFGASPTPTPTTPTPTPTTPTPTPTSGPAGCQVLWGVNQWNTGFTANVTVKNTSSAPVDGWTLTFSFPSGQQVTQAWSSTVTQSGSAVTVRNAPWNGSIPAGGTAQFGFNGSHTGTNAAPTAFSLNGTPCTVG", - "output": "cellulose 1,4-beta-cellobiosidase activity ; endo-1,4-beta-xylanase activity ; polysaccharide binding ; cellulose catabolic process ; xylan catabolic process" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate category for the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MPTQAKVATVAELTDRLNRAQMLLVADYRGLTVAELNELRKKVREKGGEVIIAKNTLTRLAAREAGKTEIEEFLGGPTALAFSYDDIPGVAKAIDDFFKASKKDIKVKGGIVGTSKITGADVERVAKMPTRDESLAKILGGINAPASRIVGGLKGVMRNIAYILGAHAQKGAEG", - "output": "large ribosomal subunit ; large ribosomal subunit rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MPLPIVAIIGRPNVGKSTIVNRLAESKDAIVHDEPGITRDRTYRNAYWEDREFQVVDTGGLVFDDNTEFLPLIREQAMAALVEASVAIFVVDGQTGLTGGDEEIAQWLRQQTIPILLAVNKCESITEGLTQAAMFWELGLGEPYPISGIHGNGTGELLDDLITYLPTQGEITETNQTKIAIVGRPNVGKSSLLNSFIGEKRAIVSPISGTTRDAIDTVVERNGKTYRLIDTAGIRKKKNVEYGAEFFGINRAFKAIRRAEVVMFVIDALDGVTEQDQKLANRIIEDGRACVIVVNKWDAIEKDNYTIYTYEQEVRSRLYFVEWAEMIFVSALTGKRVEKIINLIDNAANEYQRRVTTSVINEVLEEAISWNSPPTNRQGRQGKIYYGTQVTSKPPTIALFVNDPKRFPENYRRYIQSQFRQHLGFTGTPIRLLWRGKKAREVEQNTVNRATRV", - "output": "GTP binding ; ribosome biogenesis" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "MTGQLVQYGRHRQRRSYARISEVLELPNLIEIQTSSYQWFLDEGLREMFQDISPIEDFTGNLSLEFIDYSLGEPKYPVEESKERDVTYSAPLRVKVRLINKETGEVKDQDVFMGDFPIMTDTGTFIINGAERVIVSQLVRSPSVYFSGKVDKNGKKGFTATVIPNRGAWLEYETDAKDVVYVRIDRTRKLPVTVLLRALGFGSDQEIIDLIGENEYLRNTLDKDNTENTDKALLEIYERLRPGEPPTVENAKSLLDSRFFDPKRYDLASVGRYKINKKLHIKNRLFNQRLAETLVDPETGEILAEKGAILDRRTLDKVLPYLENGIGFKKLYPNGGVVEDEVTLQSIKIYAPTDQEGEQTINVIGNAYIEEGVKNITPSDIIASISYFFNLLHGVGDTDDIDHLGNRRLRSVGELLQNQFRIGLSRMERVVRERMSIQDTNTITPQQLINIRPVIASIKEFFGSSQLSQFMDQTNPLAELTHKRRLSALGPGGLTRERAGMEVRDVHYSHYGRMCPIETPEGPNIGLINSLSSFAKVNRFGFIETPYRRVDPETGKVTPRIDYLTADEEDNYVVAQANARLNDDGSFVDDSIVARFRGENTVVPKDRVDYMDVSPKQVVSAATACIPFLENDDSNRALMGANMQRQAVPLMQPESPIVGTGMEYVSAKDSGAAVICRHPGIVERVEAKNIWVRRYEEVDGQKVKGNLDKYSLLKFVRSNQGTCYNQRPIVSVGDEVEKGEILADGPSMEKGELALGRNVMVGFMTWDGYNYEDAIIMSERLVKDDVYTSIHIEEYESEARDTKLGPEEITRDIPNVGEDALRNLDERGIIRVGAEVKDGDLLVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGGGGIILDVKVFNREDGDELPPGVNQLVRVYIVQKRKISEGDKMAGRHGNKGVISKILPEEDMPYLPDGTPIDIMLNPLGVPSRMNIGQVLELHLGMAARRLGLHVASPVFDGAREEDVWETLEEAGMSRDAKTVLYDGRTGEPFDNRVSVGIMYMIKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEILTVKSDDVVGRVKTYEAIVKGDNVPEPGVPESFKVLIKELQSLGMDVKILSSDEEEIEMRDLEDDEDAKQNEGLSLPNDEESEELVSADAERDVVTKE", - "output": "DNA-directed RNA polymerase complex ; DNA binding ; DNA-directed 5'-3' RNA polymerase activity ; ribonucleoside binding ; DNA-templated transcription" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MAGQKIRIRLKAYDHEAIDASAKKIVETVTRTGARVVGPVPLPTEKNVYCVIRSPHKYKDSREHFEMRTHKRLIDILDPTPKTVDALMRIDLPASVDVNIQ", - "output": "ribonucleoprotein complex ; ribosome ; structural constituent of ribosome ; tRNA binding ; translation" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MARYTGPVTRKSRRLGTDLVGGDQSFEKRPYPPGQHGRARIKDSEYRQQLQEKQKARFTYGVMEKQFRRYYEEAVRHSGKTGEELLKILESRLDNVVYRAGLARTRRMARQLVSHGHFSVNGVHVNVPSYRVSQYDIIDVRDNSLNTVPFQIARETAGDRPIPSWLQVVGGRQRILIHQLPERAQIEVPLTEQLIVEYYSK", - "output": "small ribosomal subunit ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MKHWIQENYKNRSWAGELNESQEGKQIVLFGWSFRFRDQGGVIFIDLRDRTGIIQVVARKELLGDSFTLAEKVRSEYVLAVRGTLKKRDLESINPRMQTGTIEVVLDQLEILNVAKTPPFSLDEFDEVSEELKLKYRYLDFRREELKNRMIKRHEFIFAIRNYLNKRKFVEIETPILNKSTPEGARDFLVPSRLNPNQFYALPQSPQIFKQILMVGGMERYFQIVKCFRDEDLRADRQPEFTQLDMEFSFVSQEEILSEIEGLVETIYKEVFNIQLSIPFPRMTYNTAMEEYGSDKPDLRFGMKLVDVSEIVKDCDFNVFAGAVKNGGTVKVVCVPGGSIISRKEIEDYTAWLNRDYKAKGLAYMKHGTEGLESTITKRFKKEELEAISKACGSKEGDMLFFGADEREIVNHSLGALRLKLSERFETPKENEINITWIVDFPMFEWNKDHKRWDALHHPFTSPSDESIPFFESMETLQKNAGNATAKAYDLVMNGVEIGGGSIRIHSREIQNKVFQILGINEEEAKEKFGFLLEALEFGAPPHGGLAFGIDRMLMLLTGGKSIRDVIAFPKTQKGLCLMSECPSPVEEKQLQELKIKLAKV", - "output": "cytoplasm ; aspartate-tRNA ligase activity ; ATP binding ; nucleic acid binding ; aspartyl-tRNA aminoacylation" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MAKLMNKLVDSFEHDEIPDVGCVRAVLAELVLTFLFVFTGVSAAMAAGSDGKPGDAMPMATLAAVAIAHALAAGVLVTAGFHVSGGHLNPAVTVGLMVRGHITKLRAVLYVAAQLLASSAACVLLRFLSGGMVTPVHALGRGISPMQGLVMEVILTFSLLFVTYAMILDPRSQVRAIGPLLTGLIVGANSLAGGNFTGASMNPARSFGPALATGDWTNHWVYWIGPLLGGPLAGFVYESLFLVQKMHEPLLNGEV", - "output": "membrane ; vacuolar membrane ; water channel activity ; water transport" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MANSVYVKFEVPKEIADKVYEALEIARDTGKIGKGTNEVTKNIERNNVALAVIAEDIEPAEIVAHLPILAEEKEIPYVYLPTKEELGEAAGLNVGTASACIIDAGEGQELVDEIVEKVAELKN", - "output": "cytoplasm ; ribonucleoprotein complex ; ribosome ; ribonuclease P activity ; rRNA binding ; structural constituent of ribosome ; translation ; tRNA 5'-leader removal" - }, - { - "instruction": "Determine the Gene Ontology term that best describes the attributes of a given protein sequence.", - "input": "MEAVQAAAAATSSGGSSGSVPGSGSGSASKLIKTEPIDFEMLHLEENERQQDIEREPSSSNSNSNSNSLTPQRYTHVQVQTVPPRQPTGLTTPGGTQKVILTPRVEYVQQRATSSTGGGMKHVYSQQQGTAASRSAPPETTALLTTTSGTPQIIITRTLPSNQHLSRRHSASPSALHHYQQQQPQRQQSPPPLHHQQQQQQQHVRVIRDGRLYDEATVVVAARRHSVSPPPLHHHSRSAPVSPVIARRGGAAAYMDQQYQQRQTPPLAPPPPPPPPPPPPPPPQQQQQQYISTGVPPPTAAARKFVVSTSTRHVNVIASNHFQQQQQQHQAQQHQQQHQQHQQHQQHVIASVSSSSSSSAIGSGGSSSSHIFRTPVVSSSSSSNMHHQQQQQQQQSSLGNSVMRPPPPPPPPKVKHASSSSSGNSSSSNTNNSSSSSNGEEPSSSIPDLEFDGTTVLCRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSTQNRGQQRALATELDDQPRLLAAVLRAHLETCEFTKEKVSAMRQRARDCPSYSMPTLLACPLNPAPELQSEQEFSQRFAHVIRGVIDFAGMIPGFQLLTQDDKFTLLKAGLFDALFVRLICMFDSSINSIICLNGQVMRRDAIQNGANARFLVDSTFNFAERMNSMNLTDAEIGLFCAIVLITPDRPGLRNLELIEKMYSRLKGCLQYIVAQNRPDQPEFLAKLLETMPDLRTLSTLHTEKLVVFRTEHKELLRQQMWSMEDGNNSDGQQNKSPSGSWADAMDVEAAKSPLGSVSSTESADLDYGSPSSSQPQGVSLPSPPQQQPSALASSAPLLAATLSGGCPLRNRANSGSSGDSGAAEMDIVGSHAHLTQNGLTITPIVRHQQQQQQQQQIGILNNAHSRNLNGGHAMCQQQQQHPQLHHHLTAGAARYRKLDSPTDSGIESGNEKNECKAVSSGGSSSCSSPRSSVDDALDCSDAAANHNQVVQHPQLSVVSVSPVRSPQPSTSSHLKRQIVEDMPVLKRVLQAPPLYDTNSLMDEAYKPHKKFRALRHREFETAEADASSSTSGSNSLSAGSPRQSPVPNSVATPPPSAASAAAGNPAQSQLHMHLTRSSPKASMASSHSVLAKSLMAEPRMTPEQMKRSDIIQNYLKRENSTAASSTTNGVGNRSPSSSSTPPPSAVQNQQRWGSSSVITTTCQQRQQSVSPHSNGSSSSSSSSSSSSSSSSSTSSNCSSSSASSCQYFQSPHSTSNGTSAPASSSSGSNSATPLLELQVDIADSAQPLNLSKKSPTPPPSKLHALVAAANAVQRYPTLSADVTVTASNGGPPSAAASPAPSSSPPASVGSPNPGLSAAVHKVMLEA", - "output": "nucleus ; DNA binding ; heme binding ; nuclear receptor activity ; RNA polymerase II cis-regulatory region sequence-specific DNA binding ; zinc ion binding ; cell differentiation ; ecdysis, chitin-based cuticle ; hormone-mediated signaling pathway ; molting cycle, chitin-based cuticle ; negative regulation of peptidoglycan recognition protein signaling pathway ; negative regulation of transcription by RNA polymerase II ; oogenesis ; positive regulation of transcription by RNA polymerase II ; regulation of ecdysteroid metabolic process ; regulation of gene expression ; response to ecdysone" - }, - { - "instruction": "For a given protein sequence, identify the appropriate Gene Ontology term that corresponds to its molecular function, biological process, and cellular component.", - "input": "SVGFKAGVKEYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYHIEPVAGEEDQYIAYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPVAYIKTFQGPPHAIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAXYKAQAETGEIKGHYLNATAGTCEEMIKRAVFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAVIDRQKNHGMHFRVLXKALRMSGGDHIHAGTVVGKLEGERDITLGFVDLLRDDFIEKDRSRGIYFTQDWVSLPGVIPVASGGIHVWHMPALTEIFGDDAVLQFGGGTLGHPWGNAPGAVANRVALEACVKARNEGRDLAAEGNDIIREASKWSPELAAACEVWKEIRFNFQAVDTLDPLKS", - "output": "chloroplast ; magnesium ion binding ; monooxygenase activity ; ribulose-bisphosphate carboxylase activity ; photorespiration ; reductive pentose-phosphate cycle" - }, - { - "instruction": "Find the Gene Ontology term that matches the attributes of a given protein sequence.", - "input": "MDSNSWINCPPVFSSSPSSRRYQSRSDLYLGDVEGEDDLKAEFMCPFCADEFDIVGLCCHIDVNHPVEAKNGVCPVCTKKVGLDIVGHITTQHGNVFKVQRRRRLRKGGYSSTYLTLKKELREANLQSLGGSSTFIPSSNIDSDPLLSSFMFKPPSAIPITEGDSVAQVSPKDTSKSKIQQESFSNEDQEKAKKSKFVRGLLWSTMLEDKF", - "output": "nucleus ; blue light signaling pathway ; red light signaling pathway" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MTQQSNSADRKPRGKGPKRPRKPKVDPFSIGELEITDYKDVKMLRRFVSDTGKILPRRRTGLSAKHQRRIAQTIKVARQLALLPYTEKLVRK", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MQVNPNPNKVPVELNRTSLYLGLLLVFVMGILFSSYFFN", - "output": "photosystem II reaction center ; plasma membrane-derived thylakoid membrane ; photosynthesis" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MSQQVGNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASLMGKSKTNGKAKKNTTEKKKKKCVLL", - "output": "1,3-beta-D-glucan synthase complex ; cell periphery ; cellular bud ; cellular bud neck ; cellular bud tip ; cytoplasm ; endoplasmic reticulum ; endosome membrane ; fungal-type vacuole membrane ; Golgi apparatus ; incipient cellular bud site ; mating projection tip ; mitochondrial outer membrane ; mitochondrion ; peroxisomal membrane ; peroxisome ; plasma membrane ; G-protein beta-subunit binding ; GTP binding ; GTPase activity ; (1->3)-beta-D-glucan biosynthetic process ; actin cytoskeleton organization ; actin cytoskeleton reorganization ; ascospore wall assembly ; budding cell bud growth ; cellular bud neck septin ring organization ; fungal-type cell wall biogenesis ; positive regulation of endocytosis ; positive regulation of mitotic actomyosin contractile ring assembly ; positive regulation of protein kinase C signaling ; regulation of cell size ; regulation of cell wall (1->3)-beta-D-glucan biosynthetic process ; regulation of exocyst localization ; regulation of fungal-type cell wall organization ; regulation of protein localization ; regulation of secondary cell septum biogenesis ; regulation of vacuole fusion, non-autophagic ; small GTPase mediated signal transduction" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MSLNDNTNLSSHTPMMQQYLRLKAEHPEILLFYRMGDFYELFYDDAKRASQLLEISLTKRGSSAGEPIPMAGVPYHAVENYLAKLVHLGESVAICEQIGDPALSKGPVERKVVRIVTPGTISDEALLNERQDNLLAAIWQSTRGFGYATLDISSGRFRLAEPTDRETMAAELQRTNPAELLYPEDFAAMDLIENRRGLRRRALWEYELDTARQQLNLQFATRDLSGFGVEQAHHALRAAGCLLQYVKDTQRTSLPHIRSLTIERQQDGIIMDAATRRNLEITQNLAGGSDNTLASVLDKTVTPMGSRMLKRWLHMPLRNAQTIALRQQSIRTLQDLNDSLPPLLRQVGDLERILARLALRTARPRDLARMRHAFQQLPQLNNELADSDNAHLQTLRSQMGEFTELRELLEHAIVETPPVLVRDGGVIAPGYNQELDEWRALADGATDYLDRLEIREREKLGLDTLKVGFNGVHGYYIQVSRGQSHLVPIHYVRRQTLKNAERYIIPELKEYEDKVLTSKGKALSLEKALYEQLFDRLLPHLAALQDSAAALAELDVLTNLAERAWTLNYSCPTLSDKPGIKLTGGRHPVVEQVLKDPFIANPLSLSPQRRMLVVTGPNMGGKSTYMRQAALITLMAHIGSFVPAEQAIIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVLMDEIGRGTSTYDGLSLAWACAESLANRIKAMTLFATHYFELTTLPEQIEGVANVHLDAVEHGDTIAFMHSVQEGAASKSYGLAVAALAGVPKDVIKRARQKLKELEALSGSAASTRADGSQLPLLVEETSPAVEALEALDPDSLSPRQALEWIYRLKSLV", - "output": "ATP binding ; ATP-dependent DNA damage sensor activity ; damaged DNA binding ; mismatched DNA binding ; mismatch repair" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MDVFKQSEVWFVIGSQNLYGPKTLQQVMDNAHQVVNSLNSEAGLPVKLVLKPLVTTPDEITALCREANYDTACIGIMTWLHTFSPAKMWIGGLSILNKPLLQFHTQFNAQIPWETMDMDFMNLNQTAHGGREFGFIGARMRQQHSVITGHWQDKEAHQRIGQWMRVAAAKQESQQLKVARFGDNMREVAVTEGDKVAAQIQFGYSVNAYGIGDLVAVVDAVSKGDIDTLVEEYEATYRFTDAVKLNGDKRENLLDAARIELGMTRFLEQGGFKAFTTNFENLYGLKQLPGLAVQRLMQQGYGFGGEGDWKTAALLRILKVMGTGLKGGTSFMEDYTYNFQPGNDLVVGSHMLEVCPSIAKEEKPLLDVQHLGIGGKADPARLIFSTPAGPALNASLIDMGNRFRLLVNVVDTVEQPHPLPKLPVARAIWQAQPSLATAAEAWIIAGGAHHTVFSQAVGVDELRLYAEMHGIEFLLIDNDTTLPAFKNEIRWNEVYYQLNR", - "output": "cytoplasm ; L-arabinose isomerase activity ; manganese ion binding ; L-arabinose catabolic process to xylulose 5-phosphate" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MSKRDYYEVLGAAKDASAQDLKKAYRRLAMKYHPDRNPDDKEALAKFKEAKEAYEVLADEQKRAAYDQFGHAGVNGQGGGPGAGAGAGGFGDIFGDIFGDIFGGAGGGGGRRGPSRGADLRYTLELSLEQAVRGCDEKIRIPTWDSCDVCHGSGAKEGSQPVTCTTCGGVGQVRMQQGFFTVQQACPTCKGEGKIIKDPCGNCGGQGRVQNTKTLSVKIPAGVDTGDRIRLAGEGEAGVHGAPSGDLYVQVAVREHDIFQRDGDNLYCEVPISFVDATLGGELDVPTLNGKVKLKVPAETQSGKLFRLRGKGVAPVRGGAPGDLLCKVVIETPVKLSSEQKELLRKFQESLESGGNRHNPRKNNWFEGVKRFFDTK", - "output": "cytoplasm ; ATP binding ; heat shock protein binding ; unfolded protein binding ; zinc ion binding ; DNA replication ; protein folding ; response to heat" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MARKSLIQRERKRQKLEQKFHSIRRSSKKEISKVSSLSGKWEIHGKLQSPPRNSAPIRLHRRCFLTGRPRGNYRDFGLSGHILRERFHACLLPGATRSSW", - "output": "chloroplast ; ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MTNVLLVALGGSIGAVLRYLLSIFMIQVFGSSFPFGTLLVNLLGSFLMGAVYALGQLSHISPEIKALIGIGLLGALTTFSTFSNETLLLLQEGLWHKAILNVLLNVTLCLFMVYLGQQLIFSRV", - "output": "plasma membrane ; fluoride transmembrane transporter activity" - }, - { - "instruction": "The Gene Ontology project (GO) provides a controlled vocabulary to describe gene and gene product attributes in any organism. There are 3 disjoint categories: cellular component, molecular function and biological process. Predict the GO term for a given protein sequence.", - "input": "MASYFQLSSMPKRLLQYALSSLEVFETDALDLENLDIAWGKNSTFEFKDVGLRLKKLETLLQLPSTIALSKAKVLLLRLTIPVDIYSSPILVEVDGVDVQLRVREEKGVYNPRTNHDRFRKKSTSKNQGLDPTLPTAEDLAASFLQTESREEKEELEAAILGETQDVSESVTSNEGGDSPVGTGTALSLPAFMARFLQGIVDRLQVRVHGITFNVDLDIPAEGPTSNRTTDPVTVQLKIDDVDIEGVTHDIESTQTRGGKDITSLFKEGKRLVCLSNIQGALITEANLFQTLSRSSSVVSPVPPHSDITEPRRAAEKERSSEETQVMSVESAGGFDRVASPSPPSSPASSLRVSESSLPEIKRPSPPLRPVKTSPSVKASTVANDSGQFDDASEDGHSSPSGSGIGDVDTSEMGDSLLQSSAILDQVTDSLLLDHPEGNDMRSSQSQSEHSTPGENSRTSTPRASAHISSPSSQTPEFNAFHSVNRAHNMLQSTMLPPRAHTRFSVERISHSQPTLPPTTAPLDRTYLVQQSRVPSEDSMSESSSSTFNEEIGDDLAQSQLFSHEEAESMYMSAVSFTSAAPIPGGWADSGTESEDARSPPLTPTDYNFRGEKLDNLENARHYIPSDGASDIDSLEKSTILPLRPLHASSRSIGSMRSETPRQSRLLHKVSSDVSVKSTVTSDDYNRMTKQIFSLDQVAIYIPAMNDPSSDPVDAAAESALFGSTFDGHSDSHSNTMDLPGAFSTHLPREQRSRSSPKPTPRVPTQPPQKPEENKSIEVDVGNLLAQFDISIGRLIYKLVCQIQESMKKKTQAATVSSKPTSSSPEPHLRVSAQTVSLKFLEHLKGTLGSRIAEPQTKALDSDVLLKTTIKGLNVSRNPSDTTTKTSVTLQKFIFGYAQENIVSFDAGLQMRASTRDLAASAGIDVSANIYQSHDGTRFEVHTLPLHVAVDLQHLDETFSWFGGLSSVLNLGSSMASNTTVISSPVIKPKSKGVKFNTPIEPDDQTMAVQNKADVRIGGLILDLVGTECSVGVETSAVKLISREEGIGIGIDKIRLSGPHLRHSVDDPAIVIDVSTTRIEFLNAPKDNDIDRLLALIAPSNSKYDQDDDILLDTLLRQRQQGSVLRLTVDDLQAKIGRLNELSYLPELGEEVARLSTVTKYLPDDDRPGLLSLVKIKKLGIDVDVNNSVGSLQLKATDLDMAQIPIPSLVALSVGTVSAYRNYSEELIGAGTDQVFNRPELRIPSIMARLIGDEMEPIVKIKLWNLRVEYRVPTLMVLLGLADTATGNEMSASITASVATLRDLAQPQTPKGKEKGVEKRPASSSSPAKPMTIDVVLKDCIVGLNPLGLPSKILAVLTEAHVAAVLPKDQNASVTAELSKASLLVIDNVAHLASTVQSDHNRNSFNGGSNQVADLTSTGYVSVSYISSAKATVLLSVDDDGQNCLDVELRDDLFVLESCADSTQTLISVLGKLAPPGKPPKKEENTYQTKVVPLNNLLASVSIDAFGTPEGQYEFSNDFTELGDLTEEGESELGFDSDYCKGSSDDGYKQAVLDDVEDSLASLNLTARDTRDGVLLDSFAEEPEIDNVALSFHEDHFGTGSSLEHSAHRWNSARNTYDTSNYSKVKKSPLRVRVRDVHIIWNLFDGYDWQDTRDTISKAVQDIESKAIEKRARNERRSTWEQDIDDDEDTERGTFLLNSMWIDIPNSRDPRELAAAINQQLNDNATETESIATTSYTVTPSRQGGGRAAKELRLNRTKHHKIAFELKGVCVDLVTFPPLSGETQSSIDIRVNDLEVFDNIRTSTWRKFATYMQDAGEREKGSNMVHIEIINVKPVPTLAATEMVIKVTILPLRLHVDQDALDFITRFFEFKVESDIEPEAPGEKPFLQRVEVNSIDVKLDFKPKRVDYSGLRSGRTTEFMNFMILDGADMTLRHCIIHGCSGFDKMGQVLNDIWTPDVKENQLPGILAGLAPVRSIVNVGSGFKDLVVIPMNEYKKDGRIVRNISRGAAIFAKTTGTELVKLGAKVAIGVQTVLQGAEGLLGPQDSSLPHANSSDDEDERKQISLYANQPVGVMQGLRGGYASLQRDLIMARDAIIAVPGEVMEDGNAKGVLKAVRKHAPTVILRPVIGVAKGAGQVLMGATNTLDKKNLERVDAKYKKH", - "output": "endoplasmic reticulum membrane ; phagophore assembly site membrane ; autophagy ; lipid transport ; protein transport" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MSGEVRLRQLEQFILDGPAQTNGQCFSVETLLDILICLYDECNNSPLRREKNILEYLEWAKPFTSKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPAQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKHPFFSGIDWDNIRNCEAPYIPEVSSPTDTSNFDVDDDCLKNSETMPPPTHTAFSGHHLPFVGFTYTSSCVLSDRSCLRVTAGPTSLDLDVSVQRTLDNNLATEAYERRIKRLEQEKLELTRKLQESTQTVQALQYSTVDGPLTASKDLEIKSLKEEIEKLRKQVAEVNHLEQQLEEANSVRRELDDAFRQIKASEKQIKTLQQEREELNKELVQASERLKNQSKELKDAHCQRKLAMQEFMEINERLTELHTQKQKLARHVRDKEEEVDLVMQKAESLRQELRRAERAKKELEVHTEALIAEASKDKKLREQSEHYSKQLENELEGLKQKQISYSPGICSIEHQQEITKLKTDLEKKSIFYEEEISKREGIHASEIKNLKKELHDSEGQQLALNKEILVLKDKLEKTRRESQSEREEFENEFKQQYEREKVLLTEENKKLTSELDKLTSLYESLSLRNQHLEEEVKDLADKKESVAHWEAQITEIIQWVSDEKDARGYLQALASKMTEELEALRNSSLGTRATDMPWKMRRFAKLDMSARLELQSALDAEIRAKQAIQEELNKVKASNILTECKLKDSEKKNLELLSEIEQLIKDTEELRSEKGIEHQDSQHSFLAFLNTPTDALDQFEIADCAPLPAHTPTLRKKGCPASTGFPPKRKTHQFFVKSFTAPTKCHQCTSLMVGLIRQGCSCEVCGFSCHITCVNKAPTVCPVPPEQTKGPLGIDPQKGVGTAYEGHVRIPKPAGVKKGWQRALAVVCDFKLFLYDIAEGKASQPTSVISQVIDMRDEEFSVSSVLASDVIHASRKDIPCIFRVTASQLSAPSNKCSILMLADSENERSKWVGVLSELHKILKKNKFRDRSVYVPKEAYDSTLPLIKTTQAAAIIDHERIALGNEEGLFVVHVTKDEIVRVGDNKKIHQIELIPSDQLVAVISGRNRHVRLFPMSALDGRETDFYKLAETKGCQTIAAGKVRHGALSCLCVAMKRQVLCYELFQSKTRHRKFKEIQVPCNVQWMAIFSEHLCVGFQSGFLRYPLNGEGGPCNMLHSNDHTLSFISHQPMDALCAVEISNKEYLLCFNSIGIYTDCQGRRSRQQELMWPANPSSCCYNAPYLSVYSENAVDIFDVNSMEWIQTLPLKKVRPLNTEGSLNLLGLETIRLIYFKNKMAEGDELVVPETSDNSRKQMVRNINNKRRYSFRVPEEERMQQRREMLRDPEMRNKLISNPTNFNHIAHMGPGDGIQILKDLPMNPRPQESRTVFSGSVSIPSITKSRPEPGRSMSASSGLSARSSAQNGSALKREFSGGSYNTKRQPMPSPSEGSLSSGGMDQGSDAPARDYDGEDSDSPRHSTASNSSNLSSPPSPISPQKTKSLSLESTDRGSWDP", - "output": "actomyosin ; cell leading edge ; cell-cell junction ; cytoplasm ; cytoskeleton ; lamellipodium ; ATP binding ; identical protein binding ; magnesium ion binding ; protein serine kinase activity ; protein serine/threonine kinase activity ; actin cytoskeleton reorganization ; actomyosin structure organization ; cell migration ; cytoskeleton organization ; microtubule cytoskeleton organization ; nuclear migration ; peptidyl-threonine phosphorylation ; protein phosphorylation ; regulation of small GTPase mediated signal transduction" - }, - { - "instruction": "The Gene Ontology (GO) describes knowledge of the biological domain with respect to three aspects: Molecular function, Biological process, Cellular component. Predict the GO term for a given protein sequence.", - "input": "MVLKVFKDHFGRGYEVYEKSYREKDSLSFFLTKEEEGKILVVAGEKAPEGLSFFKKQRAEGVSFFFCERNHENLEVLRKYFPDLKPVRAGLRASFGTGDRLGITTPAHVRALKDSGLFPIFAQQSVRENERTGRTWRDVLDDATWGVFQEGYSEGFGADADHVKRPEDLVSAAREGFTMFTIDPSDHVRNLSKLTEKERNEKFEEILRKERIDRIYLGKKYSVLGEKIEFDEKNLRDAALVYYDAIAHVDMMYQILKDETPDFDFEVSVDETETPTSPLFHIFVVEELRRRGVEFTNLALRFIGEWEKGIDYKGDLAQFEREIKMHAEIARMFEGYKISLHSGSDKFSVYPAFASATGGLFHVKTAGTSYLEAVKVISMVNPELFREIYRCTLDHFEEDRKSYHISADLSKVPEVEKVKDEDLPGLFEDINVRQLIHVTYGSVLKDASLKERLFKTLEQNEELFYETVAKHIKRHVDLLEG", - "output": "metal ion binding ; racemase and epimerase activity, acting on hydroxy acids and derivatives" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MANSAQARKRARQATKARAHNASLRSRLRTAIKAVRKAIVGGDKAAAQAVFRTSMSTIDSVADKKIIHKNKAARHKSRLSAAVKAMAA", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MNTVRVTFLLVFVLAVSLGQADKDENRMEMQEKTEQGKSYLDFAENLLLQKLEELVAKLLEEDSEESRNSRQKRCIGEGVPCDENDPRCCSGLVCLKPTLHGIWYKSYYCYKK", - "output": "extracellular region ; sodium channel inhibitor activity ; toxin activity" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MIDDNIENNEQTINDIAEEIVETANPEVTALKAEIEELKDKLIRTTAEIDNTRKRLEKARDEAKDYAIATFAKELLNVSDNLSRALAHKPANSDVEVTNIIAGVQMTKDELDKVFHKHHIEEIKPEIGSMFDYNLHNAIAQIEHPDHAPNSIITLMQSGYKIRDRLLRPATVQVVKKP", - "output": "cytoplasm ; adenyl-nucleotide exchange factor activity ; protein homodimerization activity ; protein-folding chaperone binding ; protein folding" - }, - { - "instruction": "Identify the appropriate Gene Ontology term that corresponds to the molecular function, biological process, and cellular component of a given protein sequence.", - "input": "MAVAIEAPFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGLHDHEDSPISTQSDQQEVGVNLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIPSRINRCLEEGADEFFLKPVRLSDMSKLKPHILKSRCKEHYQQEQHLQSNSESNNSSNPTSENSSSSTSTNSHKRKAVDEEILPHTIRPRHS", - "output": "cytokinin-activated signaling pathway ; phosphorelay signal transduction system" - }, - { - "instruction": "Given a protein sequence, predict the Gene Ontology term that describes its attributes in terms of molecular function, biological process, and cellular component.", - "input": "MTQANLSETLFKPRFKHPETSTLVRRFNHGAQPPVQSALDGKTIPHWYRMINRLMWIWRGIDPREILDVQARIVMSDAERTDDDLYDTVIGYRGGNWIYEWATQAMVWQQKACAEEDPQLSGRHWLHAATLYNIAAYPHLKGDDLAEQAQALSNRAYEEAAQRLPGTMRQMEFTVPGGAPITGFLHMPKGDGPFPTVLMCGGLDAMQTDYYSLYERYFAPRGIAMLTIDMPSVGFSSKWKLTQDSSLLHQHVLKALPNVPWVDHTRVAAFGFRFGANVAVRLAYLESPRLKAVACLGPVVHTLLSDFKCQQQVPEMYLDVLASRLGMHDASDEALRVELNRYSLKVQGLLGRRCPTPMLSGYWKNDPFSPEEDSRLITSSSADGKLLEIPFNPVYRNFDKGLQEITDWIEKRLC", - "output": "carboxylesterase activity" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MLEEKKKQESFEIQRIYIKDVSFEAPNTPNIFHVNWIPTIKLNLNTTTKKIKENIFEVVLMVKVTVKIKEDLVFLCDIDQAGIFFIANINEKRLKHCLYSYCPNILFPYARTCISNLVSCGSFPQMNLAPINFDALYHDHIK", - "output": "cytoplasm ; unfolded protein binding ; protein folding ; protein tetramerization ; protein transport" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "DPFGSVFSHQEFSPDEEMSRILLTSQTQKIDWKYLNKPWFRKNMQEQNFKLLIDRQRWFRTNSSVSNEFFRSNTLYESYQYLSNLFLSNGTLLAQLTKTLLRKNGFPSEWLCTLSNNERLV", - "output": "chloroplast stroma ; ATP binding" - }, - { - "instruction": "Determine the GO term that accurately describes the gene and gene product attributes of a given protein sequence.", - "input": "MAKASKGKHQSGPSNHSESIDLVRKALYGNKKVRSLKMNPDMWEKHEVINRAWRIHEYRQEKQRENLLKNQFSAMKIACEELKHTSETLYKAAMSDSINRRFPVETRTPTDTPPRLSK", - "output": "mitochondrial large ribosomal subunit ; structural constituent of ribosome ; mitochondrial translation" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MIRVICNNETYELPQGTTAADFASKIKNSHYFAGVVINDQIKDLSTTLNEGDTLRFVTFTDPEGREIFLHTSAHILAQAILRLWPDAIPTIGPVIDQGFYYDFANLSISEDDFLMIENMMGQIAEEKFAVQKKTFNSKHEALEEFARNPFKVELIKELPEGESITAYSQGEFMDLCRGPHLPSTGPVKAFKLLRTSAAYWRGDPQRESLVRIYGVAFPTTKELKEHLHQLKEAKKRDHRVLGMKLDLFSQQECSAGMPFFHPRGMIIWDALIGYWKRLHQLAGYKEIQTPQLMSRSLWEVSGHWSNYRENMYTLKIEDEDYAIKPMNCPGCMLYYKTRLHSYKQFPLRIAEIGHVHRYEVSGALSGLMRVRAFHQDDAHVFLTPEQVEEETLNILHLVSELYSTFGLEYHLELSTRPEKATIGSDELWELATAALERALVNSHTPFIINPGDGAFYGPKIDIHVKDAIQRTWQCGTIQLDMFLPERFELEYTNAQGEKSTPVMLHRALFGSIERFLGILIEHFKGRFPLWLSPEHIRVITVADRHQPRAQKLATAWQKLGFVVTVDDSNESVSKKIRNAQNMQVNYMVTLGDREIEQNTLAIRTRDNRVLNDMTEDKFLNTLLEEKNSLSLTPLL", - "output": "cytoplasm ; ATP binding ; metal ion binding ; threonine-tRNA ligase activity ; tRNA binding ; threonyl-tRNA aminoacylation" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MEKGHSDLPRQPERVAQNPFLTFDQDSFPSSYGSSLNVSEQTSGSSSTSPLPQISCLLRKDDVPLANKELSRSLIHVQELSRYPPFYNQDHQHLGVPRSRVGSDVWKMREKSFLSPSQFSSIDLSWVYRSKEEDDDFHDPKSSVVSLMGEEDYLGWSRFCDLFFLFVLSLGIGLLFIVFPALTFTGNITPSKEKFDAIMANQITDHLFAHMRVPRTNLIDKDTPSTAYHRTGYNGRKYNLVFSDEFNKEGRSFYSGNDQFWEAVNIHYAATNDLDWYDPDAITTVNGTLAIQLDAFWNRDLNFRSGMLQSWNKLCLKGGIIEVSASLAGSGEHAGLWPGIWTLGNLARPGYMATTDGVWPYAYSQCDVGITPNQSSYDGISYLPGQKLPNCVCLNEDHPSPGVGRGAPEIDILEGSTEKLHPDDELDIGVVSQSGQFAPFDFFWLPNYDYLAVYNDSITHMNSYVGGPFQQALSGITTLNNTWYGGNAFQIYGFDYKPGEGTNGYVSWFVGPNYTWSMLGSAVGQNGNVGPRQISEEPMSIIFNLGISNNWAYYYFRDLSFPAVMYIDYIRIYQDPDDTNSHIGCDPPGYPTTKYIEEHPLAYKNPNATTWEMAGYTWPKNSLMHKCNT", - "output": "endoplasmic reticulum ; endoplasmic reticulum membrane ; plasma membrane ; glucosidase activity ; (1->6)-beta-D-glucan biosynthetic process ; fungal-type cell wall organization" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "METATLVAIFISGLLVSFTGYALYTAFGQPSQQLRDPFEEHGD", - "output": "chloroplast thylakoid membrane ; photosynthesis" - }, - { - "instruction": "Determine the GO term that accurately describes the attributes of a given protein sequence.", - "input": "MGRDTIADIITSIRNADMNRKGTIQIASTNITENIVKILLREGFIKNVRKHQENNKYFLVLTLRHRRNRKGPYRTILNLKRISRPGLRIYSNYQRIPRILGGMGIVILSTSRGIMTDREARLEGIGGEILCYIW", - "output": "chloroplast ; ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Predict the specific Gene Ontology term that represents the characteristics of a given protein sequence.", - "input": "MRTPEEIIIRPLVTEKSTGLMADNKYTFLVDPGANKIEIKHAIEKLFNVKVLKVNTLMERGKLRRVGRFQGRQSDRKKAIVTLRPGDKIQVFEGLE", - "output": "ribonucleoprotein complex ; ribosome ; rRNA binding ; structural constituent of ribosome ; translation" - }, - { - "instruction": "Use the Gene Ontology project to assign the appropriate term for the cellular component, molecular function, and biological process of a given protein sequence.", - "input": "MASTFAIGLGVATAAFLGRAGYVALRRYQGGINAMGKAFYKGGFEPRMTRREAALILELPERTLNKEKVRKKHRQLMLLNHPDRGGSPYLATKINEAKEFLDKHI", - "output": "PAM complex, Tim23 associated import motor ; ATPase activator activity ; protein import into mitochondrial matrix" - }, - { - "instruction": "Analyze a protein sequence and predict the Gene Ontology category that best represents its attributes.", - "input": "MQNYFQLLGLPQEYNINLKILEKQYFAMQVKYHPDKAKTLQEKEQNLITAAELNNAYSTLKDALKRAEYMLLLQNINLNDEKTRSLLSPLELSIFWDEMEIIENTILFSDLEKIKDKYELMKKLEIDSLKQAFEEQNLSDATIKTSKLKYIGTLLHKLQEKIKSCK", - "output": "ATPase activator activity ; protein-folding chaperone binding ; cluster assembly ; protein complex oligomerization ; protein folding" - }, - { - "instruction": "Given a protein sequence, predict the corresponding Gene Ontology term that describes its molecular function, biological process, and cellular component.", - "input": "MAPGATATPFLPTVSNETTLRESFVRDEDERPKVAYNVFSSEIPVISLEGIDEIEGRRVEICKKIVAACEDWGVFQVVDHGVDAGVIADMTRLAREFFSLPPEDKLRFDMSGGKKGGFIVSSHLQGEAVQDWREIVTYFSYPIRARDYSRWPDKPEDWRSVTEKYSETLMELACKLLGVLSEAMGLDTEAITKACIDMDQKVVVNFYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATKDGGKTWITVQPVEGAFVVNLGDHGHFLSNGRFKNADHQAVVNSNTSRLSIATFQNPAPDAIVYPLAIREGEKPVLDEPITFAEMYRRKMSRDLELAKIKKLAKVENQEVLEKTKVEAVAQPKGLGEILA", - "output": "L-ascorbic acid binding ; metal ion binding ; naringenin 3-dioxygenase activity ; flavonoid biosynthetic process" - }, - { - "instruction": "Provide the Gene Ontology term that matches the characteristics of a given protein sequence.", - "input": "MFPSPALTPTPFSVKDILNLEQQQRSLAAAGELSARLEATLAPSSCMLAAFKPEAYAGPEAAAPGLPELRAELGRAPSPAKCASAFPAAPAFYPRAYSDPDPAKDPRAEKKELCALQKAVELEKTEADNAERPRARRRRKPRVLFSQAQVYELERRFKQQRYLSAPERDQLASVLKLTSTQVKIWFQNRRYKCKRQRQDQTLELVGLPPPPPPPARRIAVPVLVRDGKPCLGDSAPYAPAYGVGLNPYGYNAYPAYPGYGGAACSPGYSCTAAYPAGPSPAQPATAAANNNFVNFGVGDLNAVQSPGIPQSNSGVSTLHGIRAW", - "output": "chromatin ; cytoplasm ; nucleus ; protein-containing complex ; protein-DNA complex ; RNA polymerase II transcription regulator complex ; transcription regulator complex ; chromatin binding ; DNA binding ; DNA-binding transcription activator activity ; DNA-binding transcription activator activity, RNA polymerase II-specific ; DNA-binding transcription factor activity ; DNA-binding transcription factor activity, RNA polymerase II-specific ; protein homodimerization activity ; RNA polymerase II cis-regulatory region sequence-specific DNA binding ; RNA polymerase II-specific DNA-binding transcription factor binding ; sequence-specific DNA binding ; sequence-specific double-stranded DNA binding ; transcription cis-regulatory region binding ; adult heart development ; aortic valve morphogenesis ; apoptotic process involved in heart morphogenesis ; atrial cardiac muscle cell development ; atrial cardiac muscle tissue development ; atrial septum morphogenesis ; atrioventricular node cell development ; atrioventricular node cell fate commitment ; atrioventricular node development ; bundle of His development ; cardiac conduction system development ; cardiac muscle cell development ; cardiac muscle cell proliferation ; cardiac muscle contraction ; cardiac muscle tissue morphogenesis ; cardiac ventricle formation ; cell differentiation ; embryonic heart tube development ; embryonic heart tube left/right pattern formation ; epithelial cell apoptotic process ; epithelial cell differentiation ; epithelial cell proliferation ; heart looping ; heart morphogenesis ; heart trabecula formation ; hemopoiesis ; negative regulation of apoptotic process ; negative regulation of canonical Wnt signaling pathway ; negative regulation of cardiac muscle cell apoptotic process ; negative regulation of DNA-templated transcription ; negative regulation of epithelial cell apoptotic process ; negative regulation of myotube differentiation ; negative regulation of transcription by RNA polymerase II ; outflow tract septum morphogenesis ; pharyngeal system development ; positive regulation of cardioblast differentiation ; positive regulation of cell population proliferation ; positive regulation of DNA-templated transcription ; positive regulation of epithelial cell proliferation ; positive regulation of gene expression ; positive regulation of heart contraction ; positive regulation of neuron differentiation ; positive regulation of sodium ion transport ; positive regulation of transcription by RNA polymerase II ; positive regulation of transcription initiation by RNA polymerase II ; proepicardium development ; pulmonary myocardium development ; Purkinje myocyte differentiation ; regulation of cardiac conduction ; regulation of cardiac muscle cell proliferation ; regulation of cardiac muscle contraction ; regulation of transcription by RNA polymerase II ; right ventricular cardiac muscle tissue morphogenesis ; septum secundum development ; spleen development ; thyroid gland development ; transcription by RNA polymerase II ; vasculogenesis ; ventricular cardiac muscle cell development ; ventricular cardiac myofibril assembly ; ventricular septum morphogenesis ; ventricular trabecula myocardium morphogenesis" - }, - { - "instruction": "Analyze a protein sequence and provide the corresponding Gene Ontology term that best represents its properties.", - "input": "MTVTVRFAPSPTGYIHIGNTRTALSNWLYASKNNGKFILRYDDTDVERSKDEYAQAIAVDLDWLGVRPDRVEYQSKRFDIYAKAVEKLKTAGLLYACYETADELERRRKLRLARRWPPVYGREALKLTDAEKAALEAEGRKPHWRFLLPNFESDPFATQRTEVHWDDLVRGPQTVDLASMSDPILVREDGTYLYTLPSVVDDIDMGVTHIIRGDDHVTNTGVQISIFKALGATPPVFGHHNLLTTISGEGLSKRTGALSVGSLREAGYEPMAVASLAILIGTSESVTAAPDMAALAEHFDLASISKSSAKFDPSELDALNRSLLHEMPFEKAKPRLEALGICGAKAESFWLAVHGNLDRFSDVSHWWQVVSGDLPEAPDLSGEDRDFVRHAFDLLPPEPWNGQTWKSWTEAVKSATGRKGKNLFMPLRLALTGQAHGPELADLLVLVGLERTKSRRP", - "output": "cytoplasm ; ATP binding ; glutamate-tRNA ligase activity ; tRNA binding ; zinc ion binding ; glutamyl-tRNA aminoacylation" - } -] \ No newline at end of file