| { |
| "READY": true, |
| "name": "sexcheck_chrX_50k", |
| "task": "binary", |
| "num_classes": 2, |
| "cat_idx": [], |
| "num_samples": 12078, |
| "num_features": 17118, |
| "imbalance_ratio": 1.1449, |
| "description": "This dataset contains genotypes from chromosome X for a subset of samples from the 1000 Genomes Project and HGDP, along with labels indicating the sex of each sample. For this specific dataset, 50k SNPs where randomly selected from the original sequences and missing values where introduced with a probability of 0.95. The task is to predict the sex of each sample based on the genotypes.Due to the high missingess, each sample was duplicated three times with different missingness patterns.", |
| "source": "Chromosome data was dowloaded from GnomAD v3.1.2 - 1KG + HGDP callset: https://gnomad.broadinstitute.org/downloads#v3-hgdp-1kg. Labels were obtained from 1KG and International Genome Sample Resource (IGSR) with the respective links: https://ftp.1000genomes.ebi.ac.uk/vol1/ftp/release/20130502/integrated_call_samples_v3.20250704.ALL.ped and https://www.internationalgenome.org/data-portal/data-collection/HGDP", |
| "label": "genomics" |
| } |
