README.md

---
license: cdla-permissive-2.0
task_categories:
- tabular-regression
pretty_name: true_betalactamase_complete
tags:
- tabular
- proteomics
- regression
- Biomedical
- Benchmark
- cds-seq
configs:
- config_name: true_betalactamase_complete
  data_files:
  - split: train
    path: data/train.parquet
  - split: validation
    path: data/val.parquet
  - split: test
    path: data/test.parquet
dataset_info:
  description: Sequence-level regression task predicting the fitness of all single
    codon substitutions in the TEM-1 Beta-lactamase gene. Labels measure the ability
    to confer ampicillin resistance. The Complete dataset contains all coding sequences
    (CDS) except those degenerate with any test-set CDS, using raw CDS fitness values.
    Train and test sets are derived from Firnberg et al. Features are mean-pooled
    ESM-2 (esm2_t12_35M_UR50D) sequence embeddings.
---