| { |
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| "contract": "sda-release-sample-1", |
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| "series_published": 1265, |
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| }, |
| "by_platform": { |
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| "Xenium": 1785, |
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| "CosMx": 1092, |
| "MERFISH/MERSCOPE": 463, |
| "Slide-seq": 380, |
| "Other": 299, |
| "Visium HD": 223, |
| "Stereo-seq": 208, |
| "Molecular Cartography": 47, |
| "DBiT-seq": 32, |
| "BMK S1000": 24 |
| }, |
| "by_split": { |
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| }, |
| "with_image": 8211, |
| "image_stain": { |
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| "fluorescence: DAPI": 1423, |
| "H&E-like (heuristic)": 871, |
| "fluorescence: CosMx multichannel composite": 256, |
| "blue bright-field stain (heuristic)": 125, |
| "grayscale bright-field (heuristic)": 59, |
| "fluorescence: multichannel (heuristic)": 45, |
| "fluorescence: immunofluorescence": 44, |
| "fluorescence: blue (heuristic)": 43, |
| "other bright-field stain (heuristic)": 19, |
| "fluorescence: single channel, grayscale (heuristic)": 14, |
| "undetermined": 12, |
| "fluorescence: magenta (heuristic)": 9, |
| "fluorescence: green (heuristic)": 9, |
| "toluidine blue": 7, |
| "fluorescence: red (heuristic)": 6, |
| "other bright-field stain (see review notes)": 5, |
| "fluorescence: yellow (heuristic)": 1 |
| }, |
| "image_registration": { |
| "HESRT_HUMAN_REVIEW": 4386, |
| "VERIFIED": 3472, |
| "(none)": 3237, |
| "ABSENT": 570, |
| "UNRESOLVED": 190, |
| "FAILED": 135, |
| "WITHHELD": 98, |
| "PARTIAL": 75 |
| }, |
| "coordinate_units": { |
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| "unstated": 363 |
| }, |
| "um_basis": { |
| "verified": 5151, |
| "platform_constant": 4236, |
| "unresolved": 2752, |
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| }, |
| "with_spatial_um": 4236, |
| "expression_state": { |
| "counts": 11738, |
| "unknown": 417, |
| "non-integer": 8 |
| }, |
| "reviewed": 4084, |
| "qc_flagged": 405 |
| } |
|
|
